HHsearch alignment for GI: 254780619 and conserved domain: PRK07220
>PRK07220 DNA topoisomerase I; Validated.
Probab=93.55 E-value=0.056 Score=34.22 Aligned_cols=41 Identities=29% Similarity=0.477 Sum_probs=32.1
Q ss_pred CCCCCCCCCEEEEECCC---CCCEEC---HHHCCCCCCC---------CCCCCCCC
Q ss_conf 43101465201211357---832000---0210244655---------56667874
Q gi|254780619|r 445 RLKCLHCSCWLVEHRSK---KKLYCH---QCGHSAIYSQ---------SCVVCGSS 485 (731)
Q Consensus 445 ~~~C~~C~~~l~~h~~~---~~l~Ch---~Cg~~~~~~~---------~Cp~Cg~~ 485 (731)
T Consensus 589 ~~~CP~Cg~~l~~r~~k~g~~FigCs~YP~C~~t~pLp~~g~~~~~~~~C~~~~~~ 644 (740)
T PRK07220 589 IGKCSLCGSELMVRRSKRGSRFIGCSGYPNCTFSLPLPKSGQIIVTDKVCEAHGLH 644 (740)
T ss_pred CCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCEECCCCCCEEECCCCCCCCCCE
T ss_conf 89788899600477458799788589899999852269998463478868779983