HHsearch alignment for GI: 254780619 and conserved domain: PRK08006
>PRK08006 replicative DNA helicase; Provisional.
Probab=95.39 E-value=0.26 Score=29.10 Aligned_cols=133 Identities=21% Similarity=0.228 Sum_probs=80.0
Q ss_pred CEEEEECCCCHHHHHHHHHHHHH-HHHCCCCEEEEECCCHHHHHHHHHHHCCC-CCEE-EEEECCCCCHHHHHHHH--HH
Q ss_conf 61998447531579999999999-85146847997152100134455543038-9768-99623557235667899--99
Q gi|254780619|r 219 AVSLISGVTGSGKTEVYLEIVAA-VLHLGKQVLILLPEISLTSAILERFQKRF-GVKP-AEWHSSLSTSMREKIWR--QV 293 (731)
Q Consensus 219 ~~~LL~GvTGSGKTEVYl~li~~-~L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF-~~~v-~v~HS~ls~~eR~~~w~--~i 293 (731)
T Consensus 225 ~LiviaaRPsmGKTalalnia~~~a~~~~~~V~~fSlEMs-~~ql~~Rlla~~s~v~~~~i~~g~l~~~e~~~l~~~~~~ 303 (471)
T PRK08006 225 DLIIVAARPSMGKTTFAMNLCENAAMLQDKPVLIFSLEMP-GEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISGTMGI 303 (471)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC-HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 3899994699876999999999999866995799816799-999999999974477755453688799999999999999
Q ss_pred HCCCCEEEEECCHHHH------------HHHCCCEEEEEEECCCCCCHHCCC-CCC-CHH--HHH------HHHHHHCCC
Q ss_conf 7199739994001211------------001000136774055321000024-432-248--999------997511032
Q gi|254780619|r 294 ARGAISVIVGVRSALF------------LPFKKLGLIVIDEEHDISYKQEEG-ILY-NAR--DMS------IVRGKIESF 351 (731)
Q Consensus 294 ~~G~~~IVIGtRSAif------------~P~~nLglIIvDEEHd~sykq~~~-pry-~aR--dvA------~~Ra~~~~~ 351 (731)
T Consensus 304 ~~~~~~l~idd~~~~t~~~i~a~~r~~~~~~~gl~lvvID------YLqL~~~~~~~~~r~~ei~~isr~lK~lAkel~i 377 (471)
T PRK08006 304 LLEKRNMYIDDSSGLTPTEVRSRARRIFREHGGLSLIMID------YLQLMRVPSLSDNRTLEIAEISRSLKALAKELQV 377 (471)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEE------HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9751885773689998999999999999864898689963------8866167874410668999999999999999699
Q ss_pred CEECCCC
Q ss_conf 1000024
Q gi|254780619|r 352 PVVLVSA 358 (731)
Q Consensus 352 ~lilgSA 358 (731)
T Consensus 378 pVi~LsQ 384 (471)
T PRK08006 378 PVVALSQ 384 (471)
T ss_pred CEEEECC
T ss_conf 6899701