HHsearch alignment for GI: 254780619 and conserved domain: PRK08620
>PRK08620 DNA topoisomerase III; Provisional.
Probab=96.69 E-value=0.0012 Score=46.97 Aligned_cols=51 Identities=29% Similarity=0.616 Sum_probs=35.7
Q ss_pred CCCCCCCCCCEEEEE--CCCCCCEECH--HHCCCCCC----CCCCCCCCCCEECCCCCC
Q ss_conf 343101465201211--3578320000--21024465----556667874110013542
Q gi|254780619|r 444 NRLKCLHCSCWLVEH--RSKKKLYCHQ--CGHSAIYS----QSCVVCGSSGKMIACGFG 494 (731)
Q Consensus 444 ~~~~C~~C~~~l~~h--~~~~~l~Ch~--Cg~~~~~~----~~Cp~Cg~~~~l~~~G~G 494 (731)
T Consensus 608 t~~~Cp~Cg~~m~~~~gr~Gkf~~C~~peC~~~k~~~~~~~~~Cp~C~~~~~~~~~~~g 666 (726)
T PRK08620 608 TGTKCPDCGKFMLEVKGKNGKMLVCQDRECGHRKNVSRKTNARCPNCKKKLELRGEGEG 666 (726)
T ss_pred CCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCC
T ss_conf 89856426832116858987557468998999777102128949999985689856778