HHsearch alignment for GI: 254780619 and conserved domain: PRK08620

>PRK08620 DNA topoisomerase III; Provisional.
Probab=96.69  E-value=0.0012  Score=46.97  Aligned_cols=51  Identities=29%  Similarity=0.616  Sum_probs=35.7

Q ss_pred             CCCCCCCCCCEEEEE--CCCCCCEECH--HHCCCCCC----CCCCCCCCCCEECCCCCC
Q ss_conf             343101465201211--3578320000--21024465----556667874110013542
Q gi|254780619|r  444 NRLKCLHCSCWLVEH--RSKKKLYCHQ--CGHSAIYS----QSCVVCGSSGKMIACGFG  494 (731)
Q Consensus       444 ~~~~C~~C~~~l~~h--~~~~~l~Ch~--Cg~~~~~~----~~Cp~Cg~~~~l~~~G~G  494 (731)
T Consensus       608 t~~~Cp~Cg~~m~~~~gr~Gkf~~C~~peC~~~k~~~~~~~~~Cp~C~~~~~~~~~~~g  666 (726)
T PRK08620        608 TGTKCPDCGKFMLEVKGKNGKMLVCQDRECGHRKNVSRKTNARCPNCKKKLELRGEGEG  666 (726)
T ss_pred             CCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCC
T ss_conf             89856426832116858987557468998999777102128949999985689856778