HHsearch alignment for GI: 254780619 and conserved domain: PRK11057

>PRK11057 ATP-dependent DNA helicase RecQ; Provisional.
Probab=95.54  E-value=0.041  Score=35.30  Aligned_cols=86  Identities=23%  Similarity=0.374  Sum_probs=69.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHH---HHHCCCEEEEEE
Q ss_conf             46847997152100134455543038976899623557235667899997199739994001211---001000136774
Q gi|254780619|r  245 LGKQVLILLPEISLTSAILERFQKRFGVKPAEWHSSLSTSMREKIWRQVARGAISVIVGVRSALF---LPFKKLGLIVID  321 (731)
Q Consensus       245 ~GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGtRSAif---~P~~nLglIIvD  321 (731)
T Consensus       235 ~~~sgIIYc~trk~~e~la~~L~~~-G~~~~~YHagl~~~~R~~~q~~f~~~~~~vivAT~--AFGMGIdk~dVR~ViH~  311 (607)
T PRK11057        235 RGKSGIIYCNSRAKVEDTAARLQSR-GISAAAYHAGLDNDVRADVQEAFQRDDLQIVVATV--AFGMGINKPNVRFVVHF  311 (607)
T ss_pred             CCCCEEEEECCHHHHHHHHHHHHHC-CCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEH--HHHCCCCCCCCCEEEEC
T ss_conf             8997799969289999999999857-97545305899978999999987568875899750--11057677776679977


Q ss_pred             E--CCCCCCHHCCC
Q ss_conf             0--55321000024
Q gi|254780619|r  322 E--EHDISYKQEEG  333 (731)
Q Consensus       322 E--EHd~sykq~~~  333 (731)
T Consensus       312 ~~P~s~e~yyQE~G  325 (607)
T PRK11057        312 DIPRNIESYYQETG  325 (607)
T ss_pred             CCCCCHHHHHHHHH
T ss_conf             89999999999886