HHsearch alignment for GI: 254780619 and conserved domain: PRK11057
>PRK11057 ATP-dependent DNA helicase RecQ; Provisional.
Probab=95.54 E-value=0.041 Score=35.30 Aligned_cols=86 Identities=23% Similarity=0.374 Sum_probs=69.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHH---HHHCCCEEEEEE
Q ss_conf 46847997152100134455543038976899623557235667899997199739994001211---001000136774
Q gi|254780619|r 245 LGKQVLILLPEISLTSAILERFQKRFGVKPAEWHSSLSTSMREKIWRQVARGAISVIVGVRSALF---LPFKKLGLIVID 321 (731)
Q Consensus 245 ~GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGtRSAif---~P~~nLglIIvD 321 (731)
T Consensus 235 ~~~sgIIYc~trk~~e~la~~L~~~-G~~~~~YHagl~~~~R~~~q~~f~~~~~~vivAT~--AFGMGIdk~dVR~ViH~ 311 (607)
T PRK11057 235 RGKSGIIYCNSRAKVEDTAARLQSR-GISAAAYHAGLDNDVRADVQEAFQRDDLQIVVATV--AFGMGINKPNVRFVVHF 311 (607)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHC-CCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEH--HHHCCCCCCCCCEEEEC
T ss_conf 8997799969289999999999857-97545305899978999999987568875899750--11057677776679977
Q ss_pred E--CCCCCCHHCCC
Q ss_conf 0--55321000024
Q gi|254780619|r 322 E--EHDISYKQEEG 333 (731)
Q Consensus 322 E--EHd~sykq~~~ 333 (731)
T Consensus 312 ~~P~s~e~yyQE~G 325 (607)
T PRK11057 312 DIPRNIESYYQETG 325 (607)
T ss_pred CCCCCHHHHHHHHH
T ss_conf 89999999999886