HHsearch alignment for GI: 254780619 and conserved domain: PRK11448

>PRK11448 hsdR type I restriction enzyme EcoKI subunit R; Provisional.
Probab=99.14  E-value=1.1e-09  Score=93.17  Aligned_cols=170  Identities=21%  Similarity=0.228  Sum_probs=113.6

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEECCCHHHHHHHHHHHCCCCCEE
Q ss_conf             66883789999999875204896199844753157999999999985146--8479971521001344555430389768
Q gi|254780619|r  197 PILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLHLG--KQVLILLPEISLTSAILERFQKRFGVKP  274 (731)
Q Consensus       197 ~~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L~~G--kqvLiLvPEI~Lt~Q~~~rl~~rF~~~v  274 (731)
T Consensus       415 i~lR~YQ~~AI~~v~~a~~~~~rraLl~MATGTGKTrtaial~~rLlk~~~~kRILFLvDR~~L~~QA~~~F~~~~~~~-  493 (1126)
T PRK11448        415 LGLRYYQEDAIQAVEKALANGQREILLAMATGTGKTRTAIALMYRLLKAKRFKRILFLVDRRALGEQALDAFKDTKIEG-  493 (1126)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCC-
T ss_conf             7786889999999999998098546887248885898999999999965876725798565899999999875434545-


Q ss_pred             EEEECCCCCHHHHHHH---HHHHCCCCEEEEECCHHHH-----------HHHCCCEEEEEEECCCCCCHHCCCCC---CC
Q ss_conf             9962355723566789---9997199739994001211-----------00100013677405532100002443---22
Q gi|254780619|r  275 AEWHSSLSTSMREKIW---RQVARGAISVIVGVRSALF-----------LPFKKLGLIVIDEEHDISYKQEEGIL---YN  337 (731)
Q Consensus       275 ~v~HS~ls~~eR~~~w---~~i~~G~~~IVIGtRSAif-----------~P~~nLglIIvDEEHd~sykq~~~pr---y~  337 (731)
T Consensus       494 -----~~~~~~~~~v~~l~~~~~~~~~rv~isT~q~m~~~i~~~~~~~~~~~~~FDlIIiDEaHRg-y~ld~em~e~e~~  567 (1126)
T PRK11448        494 -----NQTFASIYDIKGLTDKFPEDETKVHVATVQSMVKRILQSDDSEPPPVGQYDCIVVDEAHRG-YTLDKEMTEGELQ  567 (1126)
T ss_pred             -----CCCCCHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCC-CCCCCCCCCCHHC
T ss_conf             -----6664002200102567878777199973078998752357677999985137989778788-7433231100010


Q ss_pred             HHH----HHHHHH--HHCCCCEECCCCCCCHHHHHHHHHHHH
Q ss_conf             489----999975--110321000024543246775321234
Q gi|254780619|r  338 ARD----MSIVRG--KIESFPVVLVSATPSIESRVNGISRRY  373 (731)
Q Consensus       338 aRd----vA~~Ra--~~~~~~lilgSATPSles~~~~~~g~~  373 (731)
T Consensus       568 ~rd~~s~~skyr~IldYFDA~~iGLTATP~~~T~~~Fg~P~~  609 (1126)
T PRK11448        568 FRDQLDYVSKYRRVLDYFDAVKIGLTATPALHTTEIFGEPVY  609 (1126)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCE
T ss_conf             232024777899998762155404767999555677099730