HHsearch alignment for GI: 254780619 and conserved domain: PRK11664

>PRK11664 ATP-dependent RNA helicase HrpB; Provisional.
Probab=98.96  E-value=1.1e-07  Score=77.97  Aligned_cols=70  Identities=19%  Similarity=0.263  Sum_probs=52.1

Q ss_pred             HHHHHHHHHC-CCCEEEEECCCHHHHHHHHHHHCCCCC--EEEEEECCCCCHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             9999998514-684799715210013445554303897--689962355723566789999719973999400
Q gi|254780619|r  236 LEIVAAVLHL-GKQVLILLPEISLTSAILERFQKRFGV--KPAEWHSSLSTSMREKIWRQVARGAISVIVGVR  305 (731)
Q Consensus       236 l~li~~~L~~-GkqvLiLvPEI~Lt~Q~~~rl~~rF~~--~v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGtR  305 (731)
T Consensus       201 ~~~i~~~~~~~~G~iLvFLPG~~EI~~~~~~L~~~~~~~~~i~pL~g~l~~~~Q~~~~~~~~~g~rKvIlaTn  273 (812)
T PRK11664        201 AVATAELLRQESGSLLLFLPGVGEIQRVQEQLASRVGSDVLLCPLYGALSLAEQQKAILPAPAGMRKVVLATN  273 (812)
T ss_pred             HHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECC
T ss_conf             9999999735899889976998999999999863355780899644789988987760679999537999502