HHsearch alignment for GI: 254780619 and conserved domain: PRK12901
>PRK12901 secA preprotein translocase subunit SecA; Reviewed.
Probab=90.42 E-value=1.2 Score=23.99 Aligned_cols=92 Identities=18% Similarity=0.163 Sum_probs=62.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH---HHHHHHHCCCCCEEEEEECC-CCCHHHHHHHHHHHCCCCEEE
Q ss_conf 75315799999999998514684799715210013---44555430389768996235-572356678999971997399
Q gi|254780619|r 226 VTGSGKTEVYLEIVAAVLHLGKQVLILLPEISLTS---AILERFQKRFGVKPAEWHSS-LSTSMREKIWRQVARGAISVI 301 (731)
Q Consensus 226 vTGSGKTEVYl~li~~~L~~GkqvLiLvPEI~Lt~---Q~~~rl~~rF~~~v~v~HS~-ls~~eR~~~w~~i~~G~~~IV 301 (731)
T Consensus 192 ~TGEGKTLvatlp~yLnAL~GkgVHvVTvNDYLA~RDaewmg~iy~fLGltvg~i~~~~~~~~~rr~aY~------~DIt 265 (1111)
T PRK12901 192 ATGEGKTLVATLPVFLNALTGNGVHVVTVNDYLAKRDSEWMGPLYMFHGLSVDCIDKHQPNSDARRKAYE------ADIT 265 (1111)
T ss_pred ECCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHH------CCCE
T ss_conf 0688579999999999973699808983156778875998899999949865232699999799999873------7863
Q ss_pred EECCHHHHH--------------HHCCCEEEEEEEC
Q ss_conf 940012110--------------0100013677405
Q gi|254780619|r 302 VGVRSALFL--------------PFKKLGLIVIDEE 323 (731)
Q Consensus 302 IGtRSAif~--------------P~~nLglIIvDEE 323 (731)
T Consensus 266 YgTn~EfGFDYLRDnm~~~~~~~vqr~~~~aIVDEv 301 (1111)
T PRK12901 266 YGTNNEFGFDYLRDNMAVSPKDLVQRKHNYAIVDEV 301 (1111)
T ss_pred ECCCCCCCHHHHHHHCCCCHHHHCCCCCCEEEEECH
T ss_conf 415654102435640157878725677765888423