HHsearch alignment for GI: 254780619 and conserved domain: PRK13767
>PRK13767 ATP-dependent helicase; Provisional.
Probab=99.62 E-value=6.8e-13 Score=117.73 Aligned_cols=324 Identities=16% Similarity=0.183 Sum_probs=181.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH-HHHHHH--------HCCCCEEEEECCCHHHHHHHHHHHC
Q ss_conf 6883789999999875204896199844753157999999-999985--------1468479971521001344555430
Q gi|254780619|r 198 ILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLE-IVAAVL--------HLGKQVLILLPEISLTSAILERFQK 268 (731)
Q Consensus 198 ~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~-li~~~L--------~~GkqvLiLvPEI~Lt~Q~~~rl~~ 268 (731)
T Consensus 32 ~p~~~Q~~a~~~i~~G-----~~~Li~ApTGsGKTlAaflp~l~~l~~~~~~~~~~~~~~~LyIsPLkAL~~D~~r~L~~ 106 (878)
T PRK13767 32 TFTPPQRYAIPLIHEG-----KNVLISSPTGSGKTLAAFLGIIDELFRLAEEGELEDSVYCIYVSPLRALNNDIHRNLEE 106 (878)
T ss_pred CCCHHHHHHHHHHHCC-----CCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf 9998999999999679-----98899899981399999999999998500036778872899968479889999998886
Q ss_pred ----------C-----CCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHH--------H-HHCCCEEEEEEECC
Q ss_conf ----------3-----8976899623557235667899997199739994001211--------0-01000136774055
Q gi|254780619|r 269 ----------R-----FGVKPAEWHSSLSTSMREKIWRQVARGAISVIVGVRSALF--------L-PFKKLGLIVIDEEH 324 (731)
Q Consensus 269 ----------r-----F~~~v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGtRSAif--------~-P~~nLglIIvDEEH 324 (731)
T Consensus 107 pl~~i~~~~~~~g~~~~~i~v~vr~GDT~~~er~r----~~~~pp~ILiTTPEsL~lll~~~~~~~~l~~l~~VIvDE~H 182 (878)
T PRK13767 107 PLEEIREIAKERGIELPEIRHAVRTGDTSSYEKQK----MLRKPPHILITTPETLAILLNSPKFREKLRTVKWVIVDEIH 182 (878)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHH----HHHCCCCEEECCHHHHHHHHCCHHHHHHHCCCCEEEECCCH
T ss_conf 99999999875278877744776369999999999----97489987987989999995496799985589999981716
Q ss_pred CCCCHHCCCCC-CC-HHHHHHHHHHHC-CCCEECCCCCCC-HHHHHHHHHHHHH-----HHCCCCCCCCCCCCCCEECCC
Q ss_conf 32100002443-22-489999975110-321000024543-2467753212344-----412432236765433211022
Q gi|254780619|r 325 DISYKQEEGIL-YN-ARDMSIVRGKIE-SFPVVLVSATPS-IESRVNGISRRYH-----SVHLSTRYRNSALPHLQVIDM 395 (731)
Q Consensus 325 d~sykq~~~pr-y~-aRdvA~~Ra~~~-~~~lilgSATPS-les~~~~~~g~~~-----~~~l~~R~~~~~~P~i~ivDm 395 (731)
T Consensus 183 ~l~--~--~kRG~~l~l~L~RL~~~~~~~~~riglSATv~~~~~~a~~L~g~~~~g~~r~~~iv-~~~~~k~~~~~~~~p 257 (878)
T PRK13767 183 SLA--E--NKRGVHLSLSLERLEELVGGEFVRIGLSATIEPLEEVAKFLVGYNDDGEPRDCEIV-DTRFAKPIDIKVLCP 257 (878)
T ss_pred HHH--C--CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEE-CCCCCCCCEEEEECC
T ss_conf 752--4--77458999999999986689987999964648999999985155667999852895-468778742688445
Q ss_pred -CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEECHHHCCCC
Q ss_conf -2233222454798999999886226551799742220000002356543431014652012113578320000210244
Q gi|254780619|r 396 -RGQTIAQGKSLSPEMIDGIRHTLARNEQTLLFLNRRGYAPLTLCQVCGNRLKCLHCSCWLVEHRSKKKLYCHQCGHSAI 474 (731)
Q Consensus 396 -~~~~~~~~~~lS~~l~~~i~~~l~~g~qvll~lnRrGya~~~~C~~Cg~~~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~~ 474 (731)
T Consensus 258 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~tLvF~NtR~~aE~~~~-~L~--~~~~~~~~-------~~~i~~HH------ 321 (878)
T PRK13767 258 VDDLIHTPAEEISEALYETLDELIQEHRTTLIFTNTRSGAERVVY-KLR--KRYPEEYD-------EDNIGAHH------ 321 (878)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHH-HHH--HHHHHCCC-------CCCEEEEC------
T ss_conf 621245885568999999999999838977999155899999999-999--85343067-------54322201------
Q ss_pred CCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCC
Q ss_conf 65556667874110013542899888852048520001023211358678999998621257657987044302311345
Q gi|254780619|r 475 YSQSCVVCGSSGKMIACGFGIERIAEEVCEYFPLARISILSSDLEGGGGRLQLQLSAIAKGEIDIIIGTQLVAKGHNFPR 554 (731)
Q Consensus 475 ~~~~Cp~Cg~~~~l~~~G~Gte~~~e~l~~~fp~~~v~~~d~d~~~~~~~~~~~~~~~~~~~~~ilvgTq~i~kg~~fp~ 554 (731)
T Consensus 322 --------gS---l--------------------------------s~e~R~~vE~~lk~G~l~~vV~TsSLELGIDiG~ 358 (878)
T PRK13767 322 --------SS---L--------------------------------SREVRLEVEEKLKRGELKVVVSSTSLELGIDIGY 358 (878)
T ss_pred --------CC---C--------------------------------CHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCC
T ss_conf --------77---8--------------------------------9999999999985799868998273650777775
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCEEEEEECCCC
Q ss_conf 2012330003443102455789999987543110256678-868999932986
Q gi|254780619|r 555 MSLVGVVDGDLGLTNADLRSSERTFQLLSQVTGRAGRFGL-KSLGLIQAYQPT 606 (731)
Q Consensus 555 v~lv~il~aD~~l~~pd~ra~E~~~qll~qv~gRagr~~~-~g~v~iQt~~p~ 606 (731)
T Consensus 359 Vd~Viq~gsP------------~svarllQR~GRsGH~~g~~s~g~~vp~~~~ 399 (878)
T PRK13767 359 IDLVVLLGSP------------KSVSRLLQRIGRAGHRLGEVSKGRIIVVDRD 399 (878)
T ss_pred CCEEEECCCC------------HHHHHHHHHHCCCCCCCCCEEEEEEEECCCH
T ss_conf 2589975896------------1189999983357899998046999979816