HHsearch alignment for GI: 254780619 and conserved domain: PTZ00110
>PTZ00110 helicase; Provisional.
Probab=99.70 E-value=4.8e-14 Score=126.48 Aligned_cols=327 Identities=17% Similarity=0.197 Sum_probs=185.5
Q ss_pred HHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 77099989997524557223445541023566543446666883789999999875204896199844753157999999
Q gi|254780619|r 158 RASQVSSHVIDGLKAQGVIKQIFEVISPVVDSPNLYFSLPILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLE 237 (731)
Q Consensus 158 ~~~~~s~~~i~~L~~kglI~~~~~~~~~~~~~~~~~~~~~~Lt~eQ~~a~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~ 237 (731)
T Consensus 185 ~~~~fp~~il~~i~~~GF~~---------------------PTPIQ~qaIPiaLs----G-rDvIgiAqTGSGKTLAFlL 238 (602)
T PTZ00110 185 EYTSFPDYILKSIEAAGFTE---------------------PTPIQVQGWPIALS----G-RDMIGIAETGSGKTLAFLL 238 (602)
T ss_pred HHCCCCHHHHHHHHHCCCCC---------------------CCHHHHHHHHHHHC----C-CCEEEECCCCCHHHHHHHH
T ss_conf 01599999999999769999---------------------99899999879856----9-8679987897889999999
Q ss_pred -HHHHHHHC-------CCCEEEEECCCHHHHHHHHHHHC---CCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCH
Q ss_conf -99998514-------68479971521001344555430---38976899623557235667899997199739994001
Q gi|254780619|r 238 -IVAAVLHL-------GKQVLILLPEISLTSAILERFQK---RFGVKPAEWHSSLSTSMREKIWRQVARGAISVIVGVRS 306 (731)
Q Consensus 238 -li~~~L~~-------GkqvLiLvPEI~Lt~Q~~~rl~~---rF~~~v~v~HS~ls~~eR~~~w~~i~~G~~~IVIGtRS 306 (731)
T Consensus 239 P~l~hi~~q~~~~~~~gP~aLILaPTRELA~QI~~e~~~~~~~~~ir~~~i~GG~~~~~---Q~~~L~~G-~dIvVATPG 314 (602)
T PTZ00110 239 PAIVHINAQPLLRPGDGPIVLVLAPTRELAEQIREQALQFGRSSKLKNSVAYGGVPKRF---QTYALRRG-VEILIACPG 314 (602)
T ss_pred HHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH---HHHHHCCC-CCEEEECCH
T ss_conf 99999851634367899769997383999999999999971547854999979968799---99987169-999997923
Q ss_pred HHH-------HHHCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHH--H-HHHH
Q ss_conf 211-------00100013677405532100002443224899999751103210000245432467753212--3-4441
Q gi|254780619|r 307 ALF-------LPFKKLGLIVIDEEHDISYKQEEGILYNARDMSIVRGKIESFPVVLVSATPSIESRVNGISR--R-YHSV 376 (731)
Q Consensus 307 Aif-------~P~~nLglIIvDEEHd~sykq~~~pry~aRdvA~~Ra~~~~~~lilgSATPSles~~~~~~g--~-~~~~ 376 (731)
T Consensus 315 RLiDlL~~~~~~L~~v~yLVLDEA-DRML--DmGFe~qI~~Il~~--i~pdRQTlLFSAT~p~~V~~LA~~~L~~~Pv~I 389 (602)
T PTZ00110 315 RLIDFLESNVTNLRRVTYLVLDEA-DRML--DMGFEPQIRKIVSQ--IRPDRQTLMWSATWPKEVQSLARDLCKEEPVHV 389 (602)
T ss_pred HHHHHHHCCCCCCCCEEEEEEECH-HHHH--CCCCHHHHHHHHHH--CCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEE
T ss_conf 899999649987431028998757-7663--54629999999985--897877999955899899999999820698899
Q ss_pred CCCCCCCCCCCC----CCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEHHCCCCCCCCCCCCCCCC
Q ss_conf 243223676543----3211022223322245479899999988622655179974222000000235654343101465
Q gi|254780619|r 377 HLSTRYRNSALP----HLQVIDMRGQTIAQGKSLSPEMIDGIRHTLARNEQTLLFLNRRGYAPLTLCQVCGNRLKCLHCS 452 (731)
Q Consensus 377 ~l~~R~~~~~~P----~i~ivDm~~~~~~~~~~lS~~l~~~i~~~l~~g~qvll~lnRrGya~~~~C~~Cg~~~~C~~C~ 452 (731)
T Consensus 390 ~Vg~~-~~~a~~~I~Q~v~vv~---~~e-----K~~~L~~lL~~~~-~~~kvIIFvnTK~-------------------- 439 (602)
T PTZ00110 390 NVGSL-DLTTCHNIKQEVFVIE---EHE-----KRAKLKELLGQIM-DGGKILIFSETKK-------------------- 439 (602)
T ss_pred EECCC-CCCCCCCCEEEEEEEC---HHH-----HHHHHHHHHHHCC-CCCCEEEEECCHH--------------------
T ss_conf 93688-8777787058999965---188-----9999999998527-8996899929738--------------------
Q ss_pred CEEEEECCCCCCEECHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 20121135783200002102446555666787411001354289988885204852000102321135867899999862
Q gi|254780619|r 453 CWLVEHRSKKKLYCHQCGHSAIYSQSCVVCGSSGKMIACGFGIERIAEEVCEYFPLARISILSSDLEGGGGRLQLQLSAI 532 (731)
Q Consensus 453 ~~l~~h~~~~~l~Ch~Cg~~~~~~~~Cp~Cg~~~~l~~~G~Gte~~~e~l~~~fp~~~v~~~d~d~~~~~~~~~~~~~~~ 532 (731)
T Consensus 440 -----------------------------------------~ad~L~~~L~~~--G~~a~~LHGd~~--Q~eR~~~L~~F 474 (602)
T PTZ00110 440 -----------------------------------------GADTLTKELRLD--GWPALCIHGDKK--QEERTWVLNEF 474 (602)
T ss_pred -----------------------------------------HHHHHHHHHHHC--CCCEEEEECCCC--HHHHHHHHHHH
T ss_conf -----------------------------------------999999999867--995798208899--99999999999
Q ss_pred CCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
Q ss_conf 125765798704430231134520123300034431024557899999875431102566788689999329864
Q gi|254780619|r 533 AKGEIDIIIGTQLVAKGHNFPRMSLVGVVDGDLGLTNADLRSSERTFQLLSQVTGRAGRFGLKSLGLIQAYQPTH 607 (731)
Q Consensus 533 ~~~~~~ilvgTq~i~kg~~fp~v~lv~il~aD~~l~~pd~ra~E~~~qll~qv~gRagr~~~~g~v~iQt~~p~~ 607 (731)
T Consensus 475 r~G~~~ILVATDVAARGLDI~dV~~VINYD~P--~~~ed----------YVHRIGRTGRAG~kG~A~T-F~Tpd~ 536 (602)
T PTZ00110 475 KTGKHPIMIATDVASRGLDVRDVKYVINFDFP--NQIED----------YVHRIGRTGRAGAKGASYT-FLTPDK 536 (602)
T ss_pred HCCCCCEEEECCHHHCCCCCCCCCEEEEECCC--CCCCC----------CCCCCCCCCCCCCCEEEEE-EECCCC
T ss_conf 76999889882223315551579879995897--98022----------1013561506899316999-977770