HHsearch alignment for GI: 254780619 and conserved domain: TIGR02487
>TIGR02487 NrdD anaerobic ribonucleoside-triphosphate reductase; InterPro: IPR012833 This entry is found in the oxygen-sensitive (anaerobic, class III) ribonucleotide reductase. The mechanism of the enzyme involves a glycine-centred radical , a C-terminal zinc binding site , and a set of conserved active site cysteines and asparagines . This enzyme requires an activating component, NrdG, a radical-SAM domain containing enzyme (IPR012837 from INTERPRO). Together the two form an alpha-2/beta-2 heterodimer.; GO: 0008998 ribonucleoside-triphosphate reductase activity, 0016491 oxidoreductase activity.
Probab=92.61 E-value=0.047 Score=34.79 Aligned_cols=39 Identities=26% Similarity=0.394 Sum_probs=24.4
Q ss_pred CCEECHHH-CCCCCC-----CCCCCCCCCCEECCCCCCHHHHHHHHH
Q ss_conf 32000021-024465-----556667874110013542899888852
Q gi|254780619|r 463 KLYCHQCG-HSAIYS-----QSCVVCGSSGKMIACGFGIERIAEEVC 503 (731)
Q Consensus 463 ~l~Ch~Cg-~~~~~~-----~~Cp~Cg~~~~l~~~G~Gte~~~e~l~ 503 (731)
T Consensus 590 ~~~C~~Cg~y~~~~~~t~~g~~CP~CGs~D~-~~~-~~~sRitGYL~ 634 (655)
T TIGR02487 590 VDVCEDCGEYTGEGLNTEKGDKCPKCGSHDE-TDI-EVISRITGYLR 634 (655)
T ss_pred CCEECCCCCCHHCCCCCCCCCCCCCCCCCCH-HHE-EEEEEEEEECC
T ss_conf 7652576532000000115566889887622-110-13000355226