HHsearch alignment for GI: 254780619 and conserved domain: pfam00308
>pfam00308 Bac_DnaA Bacterial dnaA protein.
Probab=95.49 E-value=0.078 Score=33.14 Aligned_cols=167 Identities=17% Similarity=0.215 Sum_probs=73.8
Q ss_pred HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHH-HC--CCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 9999875204896199844753157999999999985-14--68479971521001344555430389768996235572
Q gi|254780619|r 207 VEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVL-HL--GKQVLILLPEISLTSAILERFQKRFGVKPAEWHSSLST 283 (731)
Q Consensus 207 ~~~i~~~~~~~f~~~LL~GvTGSGKTEVYl~li~~~L-~~--GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~v~HS~ls~ 283 (731)
T Consensus 23 ~~~i~~~~~~~~npl~i~G~~G~GKTHL-LqA~~~~~~~~~~~~~v~yl~~~~--------------------------- 74 (219)
T pfam00308 23 ALAVAEAPGKAYNPLFIYGGVGLGKTHL-LHAIGNYALRNFPNLRVVYLTSEE--------------------------- 74 (219)
T ss_pred HHHHHHCCCCCCCCEEEECCCCCCHHHH-HHHHHHHHHHHCCCCEEEEEEHHH---------------------------
T ss_conf 9999967587678269988999988899-999999999849998288843999---------------------------
Q ss_pred HHHHHHHHHH-HCCCCEEEEECCHHHHHHHCCCEEEEEEECCCCCCHH-CCCCCCCHHHHHHHHHHHCCCCEECCCCCCC
Q ss_conf 3566789999-7199739994001211001000136774055321000-0244322489999975110321000024543
Q gi|254780619|r 284 SMREKIWRQV-ARGAISVIVGVRSALFLPFKKLGLIVIDEEHDISYKQ-EEGILYNARDMSIVRGKIESFPVVLVSATPS 361 (731)
Q Consensus 284 ~eR~~~w~~i-~~G~~~IVIGtRSAif~P~~nLglIIvDEEHd~sykq-~~~pry~aRdvA~~Ra~~~~~~lilgSATPS 361 (731)
T Consensus 75 --~~~~~~~~l~~~~-------~~~f~~~l~~~d~l~iDDi~~l~~~~~~ee~lf~l~N----~~~~~~~~lllts~~~p 141 (219)
T pfam00308 75 --FLNDFVDALRDNK-------IEAFKKSYRNVDLLLIDDIQFLAGKEKTQEEFFHTFN----ALHENNKQIVLTSDRPP 141 (219)
T ss_pred --HHHHHHHHHHCCC-------HHHHHHHHHHCCHHHHCCHHHHCCCHHHHHHHHHHHH----HHHHCCCEEEEECCCCC
T ss_conf --9998899998188-------8899999763233652236765686478999999999----99972986999779981
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECC-------CCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 246775321234441243223676543321102-------222332224547989999998862265
Q gi|254780619|r 362 IESRVNGISRRYHSVHLSTRYRNSALPHLQVID-------MRGQTIAQGKSLSPEMIDGIRHTLARN 421 (731)
Q Consensus 362 les~~~~~~g~~~~~~l~~R~~~~~~P~i~ivD-------m~~~~~~~~~~lS~~l~~~i~~~l~~g 421 (731)
T Consensus 142 ~~l~-------~~~~dL~SRL~~g~~~~i~~pdd~~~~~iL~~~a~~r~l~l~~~v~~yl~~r~~R~ 201 (219)
T pfam00308 142 KELE-------GFEDRLRSRFEWGLIIAIEPPDLETRLAILRKKAEEENINIPNEVLNFIAQRITDN 201 (219)
T ss_pred CCCC-------CCCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
T ss_conf 0024-------53277999986875661169999999999999999849999999999999842798