HHsearch alignment for GI: 254780619 and conserved domain: pfam01155

>pfam01155 HypA Hydrogenase expression/synthesis hypA family. Four conserved cysteines lie either side of the least conserved region.

Probab=91.13  E-value=0.17  Score=30.57  Aligned_cols=55  Identities=22%  Similarity=0.288  Sum_probs=35.0

Q ss_pred             CCHHHHHHHHHHHCCCCEEEEEECCCCEEHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEECHHHCCCCC---CCCCCCC
Q ss_conf             7989999998862265517997422200000023565434310146520121135783200002102446---5556667
Q gi|254780619|r  406 LSPEMIDGIRHTLARNEQTLLFLNRRGYAPLTLCQVCGNRLKCLHCSCWLVEHRSKKKLYCHQCGHSAIY---SQSCVVC  482 (731)
Q Consensus       406 lS~~l~~~i~~~l~~g~qvll~lnRrGya~~~~C~~Cg~~~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~~~---~~~Cp~C  482 (731)
T Consensus        38 V~pe~L~f~f~~~~~~T--~----------------------~--e~A~L~ie~vp~~~~C~~Cg~~~~~~~~~~~CP~C   91 (112)
T pfam01155        38 VEPEALRFAFEVAAEGT--L----------------------A--EGAELEIEEVPGVARCRDCGQEFELEERFFRCPKC   91 (112)
T ss_pred             CCHHHHHHHHHHHHCCC--C----------------------C--CCCEEEEEECCCEEECCCCCCEECCCCCCCCCCCC
T ss_conf             28999999999984588--7----------------------6--89899999518748998999714257776799089


Q ss_pred             CCCC
Q ss_conf             8741
Q gi|254780619|r  483 GSSG  486 (731)
Q Consensus       483 g~~~  486 (731)
T Consensus        92 gs~~   95 (112)
T pfam01155        92 GSLD   95 (112)
T ss_pred             CCCC
T ss_conf             7998