HHsearch alignment for GI: 254780619 and conserved domain: pfam07652

>pfam07652 Flavi_DEAD Flavivirus DEAD domain.
Probab=98.10  E-value=2.1e-05  Score=60.50  Aligned_cols=123  Identities=23%  Similarity=0.319  Sum_probs=82.3

Q ss_pred             EEEECCCCHHHH-HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCE
Q ss_conf             998447531579-9999999998514684799715210013445554303897689962355723566789999719973
Q gi|254780619|r  221 SLISGVTGSGKT-EVYLEIVAAVLHLGKQVLILLPEISLTSAILERFQKRFGVKPAEWHSSLSTSMREKIWRQVARGAIS  299 (731)
Q Consensus       221 ~LL~GvTGSGKT-EVYl~li~~~L~~GkqvLiLvPEI~Lt~Q~~~rl~~rF~~~v~v~HS~ls~~eR~~~w~~i~~G~~~  299 (731)
T Consensus         5 t~ld~HPGaGKTr~vLP~~v~~~i~~~lRtlVLaPTRVV~~Em~eAL~g----~~vr~~t~a~~~~~--------~~~~i   72 (146)
T pfam07652         5 TVLDLHPGAGKTRKVLPELVRECIDRRLRTLVLAPTRVVLAEMEEALRG----LPIRYHTPAVSSEH--------TGREI   72 (146)
T ss_pred             EEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCC----CCCEEECHHHHCCC--------CCCCE
T ss_conf             7985389999702248999999997286189977279999999999758----99467523431366--------88841


Q ss_pred             EEEECCHHHH-------HHHCCCEEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHCCCCEECCCCCCC
Q ss_conf             9994001211-------0010001367740553210000244322489999975110321000024543
Q gi|254780619|r  300 VIVGVRSALF-------LPFKKLGLIVIDEEHDISYKQEEGILYNARDMSIVRGKIESFPVVLVSATPS  361 (731)
Q Consensus       300 IVIGtRSAif-------~P~~nLglIIvDEEHd~sykq~~~pry~aRdvA~~Ra~~~~~~lilgSATPS  361 (731)
T Consensus        73 vdvmCH-AT~t~r~l~~~~~~ny~viIMDE~H~~-----DP~SIAarG~~~~~~~~g~~a~i~mTATPP  135 (146)
T pfam07652        73 VDVMCH-ATFTQRLLSPVRVPNYEVIIMDEAHFT-----DPASIAARGYISTLVELGEAAAIFMTATPP  135 (146)
T ss_pred             EEEECH-HHHHHHHHCCCCCCCEEEEEEECCCCC-----CHHHHHHHHHHHHHHHCCCEEEEEEECCCC
T ss_conf             889715-988889736888564479998512238-----989999889999885438657999956899