RPSBLAST alignment for GI: 254780619 and conserved domain: KOG0952
>gnl|CDD|36170 KOG0952, KOG0952, KOG0952, DNA/RNA helicase MER3/SLH1, DEAD-box superfamily [RNA processing and modification]. Length = 1230
Score = 39.5 bits (92), Expect = 0.004
Identities = 59/257 (22%), Positives = 100/257 (38%), Gaps = 48/257 (18%)
Query: 210 VVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLHLGKQ-------------VLILLPEI 256
V P+ K LI TGSGKT + +L K+ ++ + P
Sbjct: 118 VFPVAYKSNENMLICAPTGSGKTVLAE---LCILRTIKEHEEQGDIAKDDFKIVYIAPMK 174
Query: 257 SLTSAILERFQKRF---GVKPAEWHSSLSTS----MREKI-------WRQVARGAISVIV 302
+L + ++++F K+ G+ E + +I W V R ++
Sbjct: 175 ALAAEMVDKFSKKLAPLGISVRELTGDTQLTKTEIADTQIIVTTPEKWDVVTRKSVG--- 231
Query: 303 GVRSALFLPFKKLGLIVIDEEHDISYKQE---EGILYNARDMSIVRGKIESFPVVLVSAT 359
SAL F + L++IDE H + + E I+ AR + +V +V +SAT
Sbjct: 232 --DSAL---FSLVRLVIIDEVHLLHDDRGPVLETIV--ARTLRLVESSQSMIRIVGLSAT 284
Query: 360 -PSIE--SRVNGISRRYHSVHLSTRYRNSALPHLQVIDMRGQTIAQGKSLSPEM-IDGIR 415
P+ E +R ++ RYR L I ++G+ Q K E+ D +
Sbjct: 285 LPNYEDVARFLRVNPYAGLFSFDQRYRPVPL-TQGFIGIKGKKNRQQKKNIDEVCYDKVV 343
Query: 416 HTLARNEQTLLFLNRRG 432
L Q L+F++ R
Sbjct: 344 EFLQEGHQVLVFVHSRN 360