HHsearch alignment for GI: 254780620 and conserved domain: CHL00148
>CHL00148 orf27 Ycf27; Reviewed.
Probab=90.51 E-value=1 Score=25.29 Aligned_cols=61 Identities=13% Similarity=0.160 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHH-CC----------CHHHHHHHHHHHHH----CCCEEECCCCCCCCEECCCH
Q ss_conf 68999999999985598633599999981-99----------78999999999932----59057315654540002372
Q gi|254780620|r 6 RTDYGIRVLMYCAIHNDYPNRISQIAEAC-CI----------SELFLFKILQPLVK----AGIVETVRGRRGGVRLCRPA 70 (144)
Q Consensus 6 ~~~yAi~~l~~La~~~~~~~s~~eIA~~~-~i----------~~~~l~kil~~L~~----agli~S~rG~~GGy~Lak~~ 70 (144)
T Consensus 164 ~~E~~--lL~~L~~~~g~vvsre~L~~~vWg~~~~~~~~~r~vdv~I~rLRkKl~~~~~~~~~I~TvrG~--GY~~~~~~ 239 (240)
T CHL00148 164 GMEFS--LLELLISESGEIFSRATILKEVWGYTPERHIDTRVVDVHISRLRAKLEDDPSNPDLILTARGT--GYLFQRII 239 (240)
T ss_pred HHHHH--HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCC--CEEEEEEC
T ss_conf 99999--999999679974969999999728887667875579999999999741078999869997897--87896607