HHsearch alignment for GI: 254780620 and conserved domain: COG1777
>COG1777 Predicted transcriptional regulators [Transcription].
Probab=90.76 E-value=0.52 Score=27.04 Aligned_cols=42 Identities=31% Similarity=0.430 Sum_probs=35.1
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 999999855986335999999819978999999999932590573
Q gi|254780620|r 12 RVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVET 56 (144)
Q Consensus 12 ~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S 56 (144)
T Consensus 19 ~Il~lLt~---~p~yvsEiS~~lgvsqkAVl~HL~~LE~AGlveS 60 (217)
T COG1777 19 RILQLLTR---RPCYVSEISRELGVSQKAVLKHLRILERAGLVES 60 (217)
T ss_pred HHHHHHHC---CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHH
T ss_conf 99999854---7139998776608678999999999998587121