HHsearch alignment for GI: 254780620 and conserved domain: COG1802
>COG1802 GntR Transcriptional regulators [Transcription].
Probab=94.71 E-value=0.1 Score=31.25 Aligned_cols=66 Identities=18% Similarity=0.164 Sum_probs=49.6
Q ss_pred HCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECC-CHHHC-CHHHHHHHHCCCC
Q ss_conf 55986335999999819978999999999932590573156545400023-72126-0999999971876
Q gi|254780620|r 19 IHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCR-PADQI-TILDVVKATEESF 86 (144)
Q Consensus 19 ~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak-~~~~I-tl~dI~~aie~~~ 86 (144)
T Consensus 34 l~pG~~l~e~~La~~~gvSrtPVReAL~rL~~eGlv~~~--p~rG~~V~~~~~~~~~ei~~~R~~lE~~a 101 (230)
T COG1802 34 LAPGERLSEEELAEELGVSRTPVREALRRLEAEGLVEIE--PNRGAFVAPLSLAEAREIFEVRELLEGAA 101 (230)
T ss_pred CCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEC--CCCCEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 898298179999999888907999999999889794777--99832662899999999999999999999