HHsearch alignment for GI: 254780620 and conserved domain: PRK04158
>PRK04158 transcriptional repressor CodY; Validated.
Probab=91.76 E-value=0.29 Score=28.58 Aligned_cols=44 Identities=25% Similarity=0.323 Sum_probs=35.4
Q ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC-CCCCCCE
Q ss_conf 8633599999981997899999999993259057315-6545400
Q gi|254780620|r 22 DYPNRISQIAEACCISELFLFKILQPLVKAGIVETVR-GRRGGVR 65 (144)
Q Consensus 22 ~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~r-G~~GGy~ 65 (144)
T Consensus 199 EGlLVASkIADrvGITRSVIVNALRKlESAGVIESRSLGMKGTyI 243 (256)
T PRK04158 199 EGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTYI 243 (256)
T ss_pred CCEEEEHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEE
T ss_conf 552754333443087156778777765314613512577771279