HHsearch alignment for GI: 254780620 and conserved domain: PRK09836
>PRK09836 DNA-binding transcriptional activator CusR; Provisional.
Probab=90.54 E-value=1.1 Score=25.10 Aligned_cols=60 Identities=20% Similarity=0.266 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHC-----CC----HHHHHHHHHHHHHC---CCEEECCCCCCCCEECCC
Q ss_conf 689999999999855986335999999819-----97----89999999999325---905731565454000237
Q gi|254780620|r 6 RTDYGIRVLMYCAIHNDYPNRISQIAEACC-----IS----ELFLFKILQPLVKA---GIVETVRGRRGGVRLCRP 69 (144)
Q Consensus 6 ~~~yAi~~l~~La~~~~~~~s~~eIA~~~~-----i~----~~~l~kil~~L~~a---gli~S~rG~~GGy~Lak~ 69 (144)
T Consensus 153 ~~E~--~lL~~L~~~~g~vvsre~l~~~vw~~~~~~~~~~vdv~I~rLR~Kl~~~~~~~~I~TvrG~--GY~l~~p 224 (226)
T PRK09836 153 SKEF--TLLEFFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGV--GYMLEVP 224 (226)
T ss_pred HHHH--HHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC--CEEEECC
T ss_conf 8999--9999998689964879999999628887888588999999999985788999839996681--5698448