HHsearch alignment for GI: 254780620 and conserved domain: PRK11179
>PRK11179 DNA-binding transcriptional regulator AsnC; Provisional.
Probab=92.29 E-value=0.5 Score=27.17 Aligned_cols=79 Identities=15% Similarity=0.132 Sum_probs=52.3
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCC----CCCCE------EC-CCHHHCCHHHHH
Q ss_conf 99999998559863359999998199789999999999325905731565----45400------02-372126099999
Q gi|254780620|r 11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGR----RGGVR------LC-RPADQITILDVV 79 (144)
Q Consensus 11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~----~GGy~------La-k~~~~Itl~dI~ 79 (144)
T Consensus 12 ~~IL~~Lq--~d~R~s~~eiA~~lglS~stv~~Ri~rLe~~GvI~~~~~~id~~~lG~~~~a~i~i~~~~~~--~~~~~~ 87 (153)
T PRK11179 12 RGILEALM--ENARTPYAELAKQFGVSPGTIHVRVEKMKQAGIITGARIDVNPKQLGYDVCCFIGIILKSAK--DYPSAL 87 (153)
T ss_pred HHHHHHHH--HCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEECHHHHCCCEEEEEEEEECCCC--CHHHHH
T ss_conf 99999999--84899999999998929999999999999799658999997989939987999999984788--999999
Q ss_pred HHHCCCCCCCCCCC
Q ss_conf 99718763111468
Q gi|254780620|r 80 KATEESFFVAECFA 93 (144)
Q Consensus 80 ~aie~~~~~~~C~~ 93 (144)
T Consensus 88 ~~l~~~peV~~~~~ 101 (153)
T PRK11179 88 AKLESLDEVVEAYY 101 (153)
T ss_pred HHHHCCCHHEEEEE
T ss_conf 99748952118626