HHsearch alignment for GI: 254780620 and conserved domain: PRK11414
>PRK11414 putative DNA-binding transcriptional regulator; Provisional.
Probab=92.78 E-value=0.9 Score=25.64 Aligned_cols=71 Identities=11% Similarity=0.088 Sum_probs=50.3
Q ss_pred HHHHHHHHH-HCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECC-CHHHCCHHHHHH---HHCC
Q ss_conf 999999998-55986335999999819978999999999932590573156545400023-721260999999---9718
Q gi|254780620|r 10 GIRVLMYCA-IHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCR-PADQITILDVVK---ATEE 84 (144)
Q Consensus 10 Ai~~l~~La-~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak-~~~~Itl~dI~~---aie~ 84 (144)
T Consensus 19 ~Lr~~I~~G~l~PG~~L~e~~La~~lgVSRtPVREAL~rL~~eGLv~~~p~r--G~~V~~~s~~~--~~ei~~~R~~LE~ 94 (221)
T PRK11414 19 DLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVSVNALSVAPAQ--AFTVPEVSLEQ--LDEINRIRYELEL 94 (221)
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCC--CEEEECCCHHH--HHHHHHHHHHHHH
T ss_conf 9999998399899597189999999799906899999999988895650487--33750798899--9999999999999