HHsearch alignment for GI: 254780620 and conserved domain: PRK11569

>PRK11569 transcriptional repressor IclR; Provisional.
Probab=96.85  E-value=0.006  Score=38.49  Aligned_cols=61  Identities=18%  Similarity=0.308  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECC
Q ss_conf             689999999999855986335999999819978999999999932590573156545400023
Q gi|254780620|r    6 RTDYGIRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCR   68 (144)
Q Consensus         6 ~~~yAi~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak   68 (144)
T Consensus        26 sl~Ral~IL~~la~~~-~~lsl~eia~~lglpksT~~RlL~tL~~~G~v~~~-~~~~~Y~LG~   86 (274)
T PRK11569         26 SLTRGLKLLEWIAESN-GSVALTELAQQAGLPNSTTHRLLTTMQQQGFVRQV-GELGHWAIGA   86 (274)
T ss_pred             HHHHHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEC-CCCCEECCCH
T ss_conf             9999999999996389-99899999998791999999999999976987786-9988022457