HHsearch alignment for GI: 254780620 and conserved domain: PRK13509
>PRK13509 transcriptional repressor UlaR; Provisional.
Probab=93.27 E-value=0.35 Score=28.10 Aligned_cols=54 Identities=19% Similarity=0.132 Sum_probs=41.2
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCC
Q ss_conf 9999998559863359999998199789999999999325905731565454000237
Q gi|254780620|r 12 RVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCRP 69 (144)
Q Consensus 12 ~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak~ 69 (144)
T Consensus 9 ~Il~~L~~~--g~v~v~eLa~~~~VS~~TIRRDL~~Le~~g~l~r~~G--GA~~~~~~ 62 (251)
T PRK13509 9 ILLDMLAQL--GFVTVEKVIERLGISPATARRDINKLDESGKLKKVRN--GAEAITQQ 62 (251)
T ss_pred HHHHHHHHC--CCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEC--CEEECCCC
T ss_conf 999999986--9898999999989699899983999987897899988--97977777