HHsearch alignment for GI: 254780620 and conserved domain: TIGR02787

>TIGR02787 codY_Gpos GTP-sensing transcriptional pleiotropic repressor CodY; InterPro: IPR014154 This entry represents pleiotropic repressors in Bacillus subtilis, CodY, and other Firmicutes (low-GC Gram-positive bacteria) that respond to intracellular levels of GTP and branched chain amino acids. All have a C-terminal helix-turn-helix DNA-binding region..

Probab=90.61  E-value=0.16  Score=30.07  Aligned_cols=54  Identities=20%  Similarity=0.285  Sum_probs=44.2

Q ss_pred             HHHHHHHH--HCC-CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC-CCCCCC
Q ss_conf             99999998--559-8633599999981997899999999993259057315-654540
Q gi|254780620|r   11 IRVLMYCA--IHN-DYPNRISQIAEACCISELFLFKILQPLVKAGIVETVR-GRRGGV   64 (144)
Q Consensus        11 i~~l~~La--~~~-~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~r-G~~GGy   64 (144)
T Consensus       186 L~AV~aIf~ELdG~EG~LvAS~IAD~vGITRSVIVNALRKlESAGvIESRSLGMKGTy  243 (255)
T TIGR02787       186 LEAVEAIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGTY  243 (255)
T ss_pred             HHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCHHH
T ss_conf             9999999842289966277530207126603355454344420764130237852014