>TIGR02812 fadR_gamma fatty acid metabolism transcriptional regulator FadR; InterPro: IPR014178 Members of this entry are transcriptional regulators of fatty acid metabolism (FadR), including both biosynthesis and beta-oxidation reactions, which are found exclusively in a subset of Gammaproteobacteria with strictly one copy per genome. Proteins have an N-terminal DNA-binding domain and a less well conserved C-terminal long chain acyl-CoA-binding domain. FadR when expressed in Escherichia coli shows differences in regulatory response and fatty acid binding profiles. All members of this entry are expected to have the same function.; GO: 0000062 acyl-CoA binding, 0003677 DNA binding, 0003700 transcription factor activity, 0019217 regulation of fatty acid metabolic process.

Probab=90.50 E-value=0.2 Score=29.55 Aligned_cols=63 Identities=14% Similarity=0.169 Sum_probs=49.5 Q ss_pred CCCCCCH-HHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCC----CCCCEECCCHHHCCHHHHHHHHCCCCC Q ss_conf 9863359-999998199789999999999325905731565----454000237212609999999718763 Q gi|254780620|r 21 NDYPNRI-SQIAEACCISELFLFKILQPLVKAGIVETVRGR----RGGVRLCRPADQITILDVVKATEESFF 87 (144) Q Consensus 21 ~~~~~s~-~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~----~GGy~Lak~~~~Itl~dI~~aie~~~~ 87 (144) T Consensus 26 PGSiLPAERELsElIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNnfW----ETSGLNILeTL~~LD~~~~ 93 (275) T TIGR02812 26 PGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFW----ETSGLNILETLIRLDGESV 93 (275) T ss_pred CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHH----HCCCCCHHHHHHHHCCCCC T ss_conf 5898724665754237663037899988764113436588998627624----3027357899986187777

HHsearch alignment for GI: 254780620 and conserved domain: TIGR02812