HHsearch alignment for GI: 254780620 and conserved domain: cd00090
>cd00090 HTH_ARSR Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.
Probab=97.22 E-value=0.0017 Score=41.76 Aligned_cols=56 Identities=32% Similarity=0.388 Sum_probs=46.1
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC-CCCCCCEECC
Q ss_conf 9999999985598633599999981997899999999993259057315-6545400023
Q gi|254780620|r 10 GIRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVR-GRRGGVRLCR 68 (144)
Q Consensus 10 Ai~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~r-G~~GGy~Lak 68 (144)
T Consensus 9 r~~Il~~L~~~---~~~~~eia~~l~is~~~vs~hL~~L~~~Gli~~~~~~~~~~y~l~~ 65 (78)
T cd00090 9 RLRILRLLLEG---PLTVSELAERLGLSQSTVSRHLKKLEEAGLVESRREGRRVYYSLTD 65 (78)
T ss_pred HHHHHHHHHHC---CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEECC
T ss_conf 99999999848---9069999877784878999999999988986899988999999799