HHsearch alignment for GI: 254780620 and conserved domain: pfam01978

>pfam01978 TrmB Sugar-specific transcriptional regulator TrmB. One member of this family, TrmB, has been shown to be a sugar-specific transcriptional regulator of the trehalose/maltose ABC transporter in Thermococcus litoralis.

Probab=96.79  E-value=0.0038  Score=39.66  Aligned_cols=62  Identities=23%  Similarity=0.339  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCHH
Q ss_conf             89999999999855986335999999819978999999999932590573156545400023721
Q gi|254780620|r    7 TDYGIRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCRPAD   71 (144)
Q Consensus         7 ~~yAi~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak~~~   71 (144)
T Consensus         7 s~~E~~vY~~Ll~--~g~~t~~eia~~~~i~r~~vY~~L~~L~~kGlv~~~~~~p~-~y~a~~Pe   68 (68)
T pfam01978         7 SEYEAKVYLALLK--LGPATADEIAEESGVPRSKVYEVLRSLEKKGLVEREKGRPK-KYRAVDPE   68 (68)
T ss_pred             CHHHHHHHHHHHH--CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCC-EEEECCCC
T ss_conf             9999999999998--19988999999959889899999999998898898679744-79815969