HHsearch alignment for GI: 254780620 and conserved domain: pfam09339

>pfam09339 HTH_IclR IclR helix-turn-helix domain.
Probab=96.52  E-value=0.0068  Score=38.19  Aligned_cols=48  Identities=25%  Similarity=0.261  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf             9999999999855986335999999819978999999999932590573
Q gi|254780620|r    8 DYGIRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVET   56 (144)
Q Consensus         8 ~yAi~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S   56 (144)
T Consensus         3 ~r~l~iL~~~~~~~-~~~~l~eia~~~gl~kstv~RlL~tL~~~G~v~~   50 (52)
T pfam09339         3 DRALAILEALAEAP-GGLSLTEIARRTGLPKSTAHRLLQTLVELGYVEQ   50 (52)
T ss_pred             HHHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             99999999986289-9989999999989199999999999998819116