HHsearch alignment for GI: 254780620 and conserved domain: smart00344
>smart00344 HTH_ASNC helix_turn_helix ASNC type. AsnC: an autogenously regulated activator of asparagine synthetase A transcription in Escherichia coli
Probab=90.69 E-value=0.43 Score=27.53 Aligned_cols=78 Identities=14% Similarity=0.193 Sum_probs=48.9
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC----CCCCC-----EECC--CHHHCCHHHHH
Q ss_conf 9999999855986335999999819978999999999932590573156----54540-----0023--72126099999
Q gi|254780620|r 11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRG----RRGGV-----RLCR--PADQITILDVV 79 (144)
Q Consensus 11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG----~~GGy-----~Lak--~~~~Itl~dI~ 79 (144)
T Consensus 6 ~~Il~~L~~--n~R~s~~~iA~~lg~S~~tv~~Ri~~L~~~GiI~~~~~~vd~~~lg~~~~a~v~i~v~~~~--~~~~v~ 81 (108)
T smart00344 6 RKILEELQK--DARISLAELAKKVGLSPSTVHNRVKRLEEEGVIKGYTAVINPKKLGLSVTAFVGVDLESPD--KLEEFL 81 (108)
T ss_pred HHHHHHHHH--CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHCCCEEEEEEEEECCCH--HHHHHH
T ss_conf 999999998--2899999999998939999999999996089732028998989929987999999986830--399999
Q ss_pred HHHCCCCCCCCCC
Q ss_conf 9971876311146
Q gi|254780620|r 80 KATEESFFVAECF 92 (144)
Q Consensus 80 ~aie~~~~~~~C~ 92 (144)
T Consensus 82 ~~l~~~peV~~~~ 94 (108)
T smart00344 82 EKLEKLPEVVEVY 94 (108)
T ss_pred HHHHCCHHHHEHH
T ss_conf 9986690111312