HHsearch alignment for GI: 254780620 and conserved domain: smart00529
>smart00529 HTH_DTXR Helix-turn-helix diphteria tox regulatory element. iron dependent repressor
Probab=95.08 E-value=0.032 Score=34.23 Aligned_cols=46 Identities=28% Similarity=0.372 Sum_probs=40.8
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCEECCCHHHCC
Q ss_conf 999999819978999999999932590573156545400023721260
Q gi|254780620|r 27 ISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGGVRLCRPADQIT 74 (144)
Q Consensus 27 ~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GGy~Lak~~~~It 74 (144)
T Consensus 2 ~~diA~~L~vs~~sVs~~l~~L~~~Gli~--~~~y~~i~LT~~G~~~A 47 (96)
T smart00529 2 TSEIAERLNVSPPTVTQMLKKLEKDGLVE--YEPYRGITLTEKGRRLA 47 (96)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHCCCEE--ECCCCCEEECHHHHHHH
T ss_conf 78899884999167999999999888988--74998978898799999