HHsearch results for GI: 254780620 and protein with PDBid: 1kgs_A

>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix-turn-helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1
Probab=93.24  E-value=0.21  Score=28.05  Aligned_cols=57  Identities=18%  Similarity=0.213  Sum_probs=41.7

Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHH-----CCC----HHHHHHHHHHHHH---CCCEEECCCCCCCCEECCC
Q ss_conf             999999985598633599999981-----997----8999999999932---5905731565454000237
Q gi|254780620|r   11 IRVLMYCAIHNDYPNRISQIAEAC-----CIS----ELFLFKILQPLVK---AGIVETVRGRRGGVRLCRP   69 (144)
Q Consensus        11 i~~l~~La~~~~~~~s~~eIA~~~-----~i~----~~~l~kil~~L~~---agli~S~rG~~GGy~Lak~   69 (144)
                      ..+|.+|+.++++.+|-++|.+..     ..+    ..++.++-++|..   ..+|+++||.  ||+|..+
T Consensus       157 ~~lL~~L~~~~~~vvsr~~L~~~vwg~~~~~~~~tl~~~I~rLR~KL~~~~~~~~I~tv~g~--GY~l~~e  225 (225)
T 1kgs_A          157 YQILEYLVMNKNRVVTKEELQEHLWSFDDEVFSDVLRSHIKNLRKKVDKGFKKKIIHTVRGI--GYVARDE  225 (225)
T ss_dssp             HHHHHHHHHTTTSCEEHHHHHHHCC-----CHHHHHHHHHHHHHHHHHTTCSSCCEEEETTT--EEEECCC
T ss_pred             HHHHHHHHHCCCEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCE--EEEEEEC
T ss_conf             99999987524344429999998717777876576999999999984577999948991360--0898239