HHsearch results for GI: 254780620 and protein with PDBid: 1ku9_A

>1ku9_A Hypothetical protein MJ223; putative transcription factor, homodimeric winged-helix fold, structural genomics, PSI; 2.80A {Methanocaldococcus jannaschii} SCOP: a.4.5.36

Probab=96.57  E-value=0.0073  Score=36.71  Aligned_cols=61  Identities=25%  Similarity=0.121  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC--CCCCCCEECCCHH
Q ss_conf             9999999985598633599999981997899999999993259057315--6545400023721
Q gi|254780620|r   10 GIRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVR--GRRGGVRLCRPAD   71 (144)
Q Consensus        10 Ai~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~r--G~~GGy~Lak~~~   71 (144)
                      .-+++.+|..++ +|+|..+||+..+++++-+.+++..|.+.|+|...+  |-...|.+.-+|.
T Consensus        28 ~~~il~~L~~~~-~p~t~~eLa~~l~is~s~vs~~l~~L~~~GlV~r~~~~~drr~~~~~lt~~   90 (152)
T 1ku9_A           28 VGAVYAILYLSD-KPLTISDIMEELKISKGNVSMSLKKLEELGFVRKVWIKGERKNYYEAVDGF   90 (152)
T ss_dssp             HHHHHHHHHHCS-SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCTTCSSCEEEECCHH
T ss_pred             HHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHH
T ss_conf             999999999769-892999999998968857999999999889989853798887568774868