HHsearch results for GI: 254780620 and protein with PDBid: 1q1h_A

>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=93.60  E-value=0.089  Score=30.28  Aligned_cols=52  Identities=23%  Similarity=0.050  Sum_probs=43.0

Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCC
Q ss_conf             99999999985598633599999981997899999999993259057315654
Q gi|254780620|r    9 YGIRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRR   61 (144)
Q Consensus         9 yAi~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~   61 (144)
                      -|++++-.|-.++ +-++-++||+..++|+.-++++|..|...|+|...+-+.
T Consensus        19 ~a~~i~~~L~~~~-~~l~ee~la~~~~i~~k~vR~iL~~L~~~~lv~~~r~kd   70 (110)
T 1q1h_A           19 DVIDVLRILLDKG-TEMTDEEIANQLNIKVNDVRKKLNLLEEQGFVSYRKTRD   70 (110)
T ss_dssp             TTHHHHHHHHHHC-SCBCHHHHHHTTTSCHHHHHHHHHHHHHHTSCEEEEEC-
T ss_pred             HHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHEEEEC
T ss_conf             8999999999858-877899999894999999999999999879625201233