HHsearch results for GI: 254780620 and protein with PDBid: 1q1h_A
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=93.60 E-value=0.089 Score=30.28 Aligned_cols=52 Identities=23% Similarity=0.050 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCC
Q ss_conf 99999999985598633599999981997899999999993259057315654
Q gi|254780620|r 9 YGIRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRR 61 (144)
Q Consensus 9 yAi~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~ 61 (144)
-|++++-.|-.++ +-++-++||+..++|+.-++++|..|...|+|...+-+.
T Consensus 19 ~a~~i~~~L~~~~-~~l~ee~la~~~~i~~k~vR~iL~~L~~~~lv~~~r~kd 70 (110)
T 1q1h_A 19 DVIDVLRILLDKG-TEMTDEEIANQLNIKVNDVRKKLNLLEEQGFVSYRKTRD 70 (110)
T ss_dssp TTHHHHHHHHHHC-SCBCHHHHHHTTTSCHHHHHHHHHHHHHHTSCEEEEEC-
T ss_pred HHHHHHHHHHHCC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHEEEEC
T ss_conf 8999999999858-877899999894999999999999999879625201233