HHsearch results for GI: 254780620 and protein with PDBid: 1r1t_A

>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A

Probab=96.86  E-value=0.0031  Score=38.91  Aligned_cols=65  Identities=22%  Similarity=0.219  Sum_probs=47.8

Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC-CCCCCCEECCCHHHCCHHHHHHHH
Q ss_conf             999999985598633599999981997899999999993259057315-654540002372126099999997
Q gi|254780620|r   11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVR-GRRGGVRLCRPADQITILDVVKAT   82 (144)
Q Consensus        11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~r-G~~GGy~Lak~~~~Itl~dI~~ai   82 (144)
                      ++++..|+   +++.++.+|++..+++++-+.+-|+.|+++|+|.+.| |+.==|+|+.+    .+.++++.+
T Consensus        49 l~Il~~L~---~~~~~v~ela~~l~~s~stvS~HL~~L~~aGlV~~~r~Gr~~~Y~l~~~----~i~~ll~~~  114 (122)
T 1r1t_A           49 LRLLSLLA---RSELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQGRHVYYQLQDH----HIVALYQNA  114 (122)
T ss_dssp             HHHHHHHT---TCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEESSH----HHHHHHHHH
T ss_pred             HHHHHHHH---CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCEEEEEECHH----HHHHHHHHH
T ss_conf             99999998---2997699999998919888999999999889336898737899998929----999999999