HHsearch results for GI: 254780620 and protein with PDBid: 1r1u_A

>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A

Probab=97.22  E-value=0.00099  Score=41.82  Aligned_cols=57  Identities=18%  Similarity=0.173  Sum_probs=46.1

Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC-CCCCCCEECCCH
Q ss_conf             999999985598633599999981997899999999993259057315-654540002372
Q gi|254780620|r   11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVR-GRRGGVRLCRPA   70 (144)
Q Consensus        11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~r-G~~GGy~Lak~~   70 (144)
                      ++++..|+.   ++.++.+||+..+++++-+.+-|+.|+++|+|++.| |+.==|+|+.+.
T Consensus        29 l~Il~~L~~---~~~~v~el~~~l~~s~s~vS~HL~~L~~aglV~~~r~G~~~~Y~l~~~~   86 (106)
T 1r1u_A           29 IRIMELLSV---SEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIH   86 (106)
T ss_dssp             HHHHHHHHH---CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEESSHH
T ss_pred             HHHHHHHHC---CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEEECHHH
T ss_conf             999999982---9967999999876586589999999998893489988788999988399