HHsearch results for GI: 254780620 and protein with PDBid: 1s3j_A

>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28

Probab=94.87  E-value=0.055  Score=31.55  Aligned_cols=60  Identities=17%  Similarity=0.177  Sum_probs=45.6

Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCCCCC----CEECCCHHH
Q ss_conf             99999998559863359999998199789999999999325905731565454----000237212
Q gi|254780620|r   11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRGRRGG----VRLCRPADQ   72 (144)
Q Consensus        11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG~~GG----y~Lak~~~~   72 (144)
                      .++|..|+.+  ++.|..+||+..+++++.+.+++..|.+.|||+-.+.+.-+    +.|.....+
T Consensus        40 ~~vL~~l~~~--~~~t~~ela~~~~~~~~~vs~~l~~L~~~glv~r~~~~~D~R~~~v~LT~~G~~  103 (155)
T 1s3j_A           40 LFVLASLKKH--GSLKVSEIAERMEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDI  103 (155)
T ss_dssp             HHHHHHHHHH--SEEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHH
T ss_pred             HHHHHHHHHC--CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHH
T ss_conf             9999999986--997999999998969989999999998624255202336775200024898999