HHsearch results for GI: 254780620 and protein with PDBid: 2cfx_A
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=93.37 E-value=0.21 Score=28.13 Aligned_cols=78 Identities=8% Similarity=0.054 Sum_probs=53.6
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC----CCCCCE------ECCCHHHCCHHHHHH
Q ss_conf 9999999855986335999999819978999999999932590573156----545400------023721260999999
Q gi|254780620|r 11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRG----RRGGVR------LCRPADQITILDVVK 80 (144)
Q Consensus 11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG----~~GGy~------Lak~~~~Itl~dI~~ 80 (144)
.++|-.|..+ ...|..+||+..|+|++.+.+=+++|.+.|+|..... ..=||. +.-+|. ..-++.+
T Consensus 8 ~~Il~~L~~n--~R~s~~eiA~~~g~s~~tv~~Ri~rL~~~GiI~~~~~~id~~~lg~~~~a~i~i~~~~~--~~~~v~~ 83 (144)
T 2cfx_A 8 LNIIEELKKD--SRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQYTLEVDQKKLGLPVSCIVEATVKNA--DYERFKS 83 (144)
T ss_dssp HHHHHHHHHC--SCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEEEECTGGGTCCEEEEEEEEEGGG--CHHHHHH
T ss_pred HHHHHHHHHC--CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHCCCEEEEEEEEEECCC--CHHHHHH
T ss_conf 9999999983--89999999999892989999999999858984678999187991972899999997667--6788999
Q ss_pred HHCCCCCCCCCC
Q ss_conf 971876311146
Q gi|254780620|r 81 ATEESFFVAECF 92 (144)
Q Consensus 81 aie~~~~~~~C~ 92 (144)
.+..-..+..|.
T Consensus 84 ~l~~~p~V~~~~ 95 (144)
T 2cfx_A 84 YIQTLPNIEFCY 95 (144)
T ss_dssp HHHTCTTEEEEE
T ss_pred HHHCCCCCEEEE
T ss_conf 996498502688