HHsearch results for GI: 254780620 and protein with PDBid: 2e1c_A
>2e1c_A Putative HTH-type transcriptional regulator PH1519; DNA-binding; HET: DNA; 2.10A {Pyrococcus horikoshii OT3} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=90.37 E-value=0.51 Score=25.83 Aligned_cols=81 Identities=10% Similarity=0.142 Sum_probs=53.4
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC----CCCCCEEC----CCHHHCCHHHHHHHH
Q ss_conf 9999999855986335999999819978999999999932590573156----54540002----372126099999997
Q gi|254780620|r 11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVRG----RRGGVRLC----RPADQITILDVVKAT 82 (144)
Q Consensus 11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~rG----~~GGy~La----k~~~~Itl~dI~~ai 82 (144)
.++|-.|.. +...|..+||+..|+|++-+..=+++|.++|+|..... ..-||... ...+.=...++.+.+
T Consensus 30 ~~IL~~L~~--d~R~s~~~iA~~lglS~~tV~~Ri~rL~~~GiI~~~~~~vd~~~lg~~~~a~v~~~~~~~~~~~~~~~l 107 (171)
T 2e1c_A 30 KKIIKILQN--DGKAPLREISKITGLAESTIHERIRKLRESGVIKKFTAIIDPEALGYSMLAFILVKVKAGKYSEVASNL 107 (171)
T ss_dssp HHHHHHHHH--CTTCCHHHHHHHHTSCHHHHHHHHHHHHHTTSSCCCCCCCCGGGGTCCEEEEEEEEECTTCHHHHHHHH
T ss_pred HHHHHHHHH--CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCEEEEEEEECCCCHHHHHHHH
T ss_conf 999999998--389999999999891999999999999847990579999888996996289999874454058999999
Q ss_pred CCCCCCCCCCC
Q ss_conf 18763111468
Q gi|254780620|r 83 EESFFVAECFA 93 (144)
Q Consensus 83 e~~~~~~~C~~ 93 (144)
.....+..|..
T Consensus 108 ~~~p~V~~~~~ 118 (171)
T 2e1c_A 108 AKYPEIVEVYE 118 (171)
T ss_dssp HTSTTEEEEEE
T ss_pred HCCCCEEEEEE
T ss_conf 75998789999