HHsearch results for GI: 254780620 and protein with PDBid: 2kko_A
>2kko_A Possible transcriptional regulatory protein (possibly ARSR-family); NESG, DNA-binding, transcription regulation, WHTH, homodimer; NMR {Mycobacterium bovis} PDB: 3gw2_A
Probab=96.67 E-value=0.0053 Score=37.53 Aligned_cols=68 Identities=24% Similarity=0.267 Sum_probs=48.1
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECC-CCCCCCEECCCHHHCCHHHHHHHH
Q ss_conf 999999985598633599999981997899999999993259057315-654540002372126099999997
Q gi|254780620|r 11 IRVLMYCAIHNDYPNRISQIAEACCISELFLFKILQPLVKAGIVETVR-GRRGGVRLCRPADQITILDVVKAT 82 (144)
Q Consensus 11 i~~l~~La~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~agli~S~r-G~~GGy~Lak~~~~Itl~dI~~ai 82 (144)
++++..|. +++.++.+|++..++|.+-+.+-|+.|+++|+|.+.| |+.==|+|+.+. --.+.+.++.+
T Consensus 28 l~Il~~L~---~~~~~v~eLa~~l~is~s~vS~HL~~L~~aglV~~~r~G~~~~Y~l~~~~-i~~l~~~l~~~ 96 (108)
T 2kko_A 28 LQILDLLA---QGERAVEAIATATGMNLTTASANLQALKSGGLVEARREGTRQYYRIAGED-VARLFALVQVV 96 (108)
T ss_dssp HHHHHHHT---TCCEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEEEETTEEEEEESCHH-HHHHHHHHHHH
T ss_pred HHHHHHHH---CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCEEEEEECHHH-HHHHHHHHHHH
T ss_conf 99999998---09957999999989098889999999998893479988688999989199-99999999999