HHsearch alignment for GI: 254780621 and conserved domain: cd06470
>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins. IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6
Probab=99.95 E-value=1.1e-27 Score=191.66 Aligned_cols=90 Identities=62% Similarity=0.993 Sum_probs=86.4
Q ss_pred CCEEEEEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEEEEEE
Q ss_conf 84368994899399999701177021499996217999973033235566213455302304688973866158103852
Q gi|254780621|r 35 PPYDIERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVMSASLE 114 (157)
Q Consensus 35 P~~dI~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~~A~~~ 114 (157)
T Consensus 1 Pp~nI~~~~e~~y~i~~~lPG~~kedi~V~~~~~~LtI~g~~~~~~~~~~~~~~re~~~~~F~Rsf~Lp~~v~~~~A~~~ 80 (90)
T cd06470 1 PPYNIEKTGENNYRITLAVAGFSEDDLEIEVENNQLTVTGKKADEENEEREYLHRGIAKRAFERSFNLADHVKVKGAELE 80 (90)
T ss_pred CCCCEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEEEEEEEEEEEECCCCEECCEEEE
T ss_conf 99528992797299999949998799599999999999998656355676179995576799999994876599966986
Q ss_pred CCEEEEEEEC
Q ss_conf 8859999740
Q gi|254780621|r 115 NGLLYLELLR 124 (157)
Q Consensus 115 nGiLtI~lpK 124 (157)
T Consensus 81 nGvL~I~L~k 90 (90)
T cd06470 81 NGLLTIDLER 90 (90)
T ss_pred CCEEEEEEEC
T ss_conf 8889999989