HHsearch alignment for GI: 254780621 and conserved domain: cd06478
>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol
Probab=99.56 E-value=2.1e-14 Score=109.41 Aligned_cols=78 Identities=26% Similarity=0.540 Sum_probs=66.2
Q ss_pred EECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEE--EEEE-ECCE
Q ss_conf 948993999997011770214999962179999730332355662134553023046889738661581--0385-2885
Q gi|254780621|r 41 RTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVM--SASL-ENGL 117 (157)
Q Consensus 41 ~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~--~A~~-~nGi 117 (157)
T Consensus 3 ~~d~d~F~v~lDv~~F~Peei~Vkv~~~~l~V~gkhee~~d~~------g~~~r~F~R~~~LP~~vd~~~v~s~Ls~dG~ 76 (83)
T cd06478 3 RLDKDRFSVNLDVKHFSPEELSVKVLGDFVEIHGKHEERQDEH------GFISREFHRRYRLPPGVDPAAITSSLSADGV 76 (83)
T ss_pred EECCCCEEEEEECCCCCCHHEEEEEECCEEEEEEEEEEECCCC------CEEEEEEEEEECCCCCCCHHHEEEEECCCCE
T ss_conf 7868609999998898623369999899999999871074899------8899999997749999797896998589977
Q ss_pred EEEEEEC
Q ss_conf 9999740
Q gi|254780621|r 118 LYLELLR 124 (157)
Q Consensus 118 LtI~lpK 124 (157)
T Consensus 77 L~I~aPk 83 (83)
T cd06478 77 LTISGPR 83 (83)
T ss_pred EEEEECC
T ss_conf 9999669