HHsearch alignment for GI: 254780621 and conserved domain: cd06489
>cd06489 p23_CS_hSgt1_like p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins. hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the heat shock proteins (HSPs) Hsp70 and Hsp90, and it expression pattern is synchronized with these two Hsps. The interaction with HSP90 has been shown to involve the hSgt1_CS domain, and appears to be required for correct kinetochore assembly and efficient cell division. Some proteins in this subgroup contain a tetratricopeptide repeat (TPR) HSP-binding domain N-terminal to this CS domain, and most proteins in this subgroup contain a Sgt1-specific (SGS) domain C-terminal to the CS domain. The SGS domain interacts with some S100 family proteins. Studies suggest that S100A6 modulates in a Ca2+ dependent manner the interactions of hSgt1 with Hsp90 and Hsp70. The yeast Sgt1 CS domain is not found in this subgroup.
Probab=91.48 E-value=1.2 Score=24.33 Aligned_cols=72 Identities=15% Similarity=0.222 Sum_probs=52.0
Q ss_pred EEECCCCEEEEEECCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEEEE--EECCE
Q ss_conf 9948993999997011770214999962179999730332355662134553023046889738661581038--52885
Q gi|254780621|r 40 ERTGENAYRITIAVSGFHPSEITIEVDSSILMVRGEKKSEEKETVEYLHRGIAKRAFERRFQLADFVEVMSAS--LENGL 117 (157)
Q Consensus 40 ~~~~e~~y~i~~~lPG~~kedi~V~v~~~~LtI~g~~~~~~~~~~~~~~~e~~~~~F~R~f~Lp~~ve~~~A~--~~nGi 117 (157)
T Consensus 3 yQT~-~~V~isi~~K~~~~~~~~V~~~~~~l~v~~~~~~----g----------~~y~~~l~L~~~I~pe~S~~~v~~tK 67 (84)
T cd06489 3 YQTE-SQVVITILIKNVKPEDVSVEFEKRELSATVKLPS----G----------NDYSLKLHLLHPIVPEQSSYKILSTK 67 (84)
T ss_pred CCCC-CEEEEEEEECCCCHHHCEEEEECCEEEEEEECCC----C----------CEEEEEEECCCCCCCHHEEEEEECCE
T ss_conf 5579-9999999975899699799996999999998799----9----------74999867343117137099993718
Q ss_pred EEEEEECCC
Q ss_conf 999974068
Q gi|254780621|r 118 LYLELLRSV 126 (157)
Q Consensus 118 LtI~lpK~~ 126 (157)
T Consensus 68 vEI~LkK~~ 76 (84)
T cd06489 68 IEIKLKKTE 76 (84)
T ss_pred EEEEEECCC
T ss_conf 999998379