HHsearch alignment for GI: 254780622 and conserved domain: CHL00194
>CHL00194 ycf39 Ycf39; Provisional.
Probab=93.54 E-value=0.46 Score=26.65 Aligned_cols=204 Identities=14% Similarity=0.133 Sum_probs=87.5
Q ss_pred EEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 999952847899999999999987988999858568630698999997479758-2076788778774300114465578
Q gi|254780622|r 8 IALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVY-THLLSYKEGYESNHIQLANECDLLV 86 (405)
Q Consensus 8 IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~-~~~~~~~~~~~~~Hi~l~~~aD~~i 86 (405)
T Consensus 4 LV~GATG~lG----r~vVr~Ll~~G~~Vr~lvRn-p~ka---~~l~~~-Gve~v~gDl~dpes---l~--~Al~GvdaVi 69 (319)
T CHL00194 4 LVIGATGTLG----RQIVRRALDEGYQVKCLVRN-LRKA---AFLKEW-GAELVYGDLSLPET---IP--PALEGITAII 69 (319)
T ss_pred EEECCCCHHH----HHHHHHHHHCCCCEEEEECC-HHHH---HHHHHC-CCEEEEECCCCHHH---HH--HHHCCCCEEE
T ss_conf 9989985899----99999999688908999578-6763---234215-96799942788778---99--9965996799
Q ss_pred EEECCHH----HHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHH-HHH--HHHHHHH-HHHHC--CCCCCCCHHH
Q ss_conf 8411188----89885202455214666752279968984056600000-388--9999999-86400--0134652125
Q gi|254780622|r 87 VAPASAN----FIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWA-KPA--TQRNVEI-LQKDG--CYFIGPESGA 156 (405)
Q Consensus 87 VaPaTaN----tiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~-~p~--~~~nl~~-L~~~g--~~vi~P~~g~ 156 (405)
T Consensus 70 ~~~~~~~~~~~~~~~vd~~g~~~li~AAk~aG-Vkr~V~lS~lga~~~~~~p~~~~K~~~E~~L~~Sgl~~TIlRPs~-F 147 (319)
T CHL00194 70 DASTSRPSDLNNAYQIDLEGKLALIEAAKAAK-VKRFIFFSILNAEQYPQVPLMKIKSDIEEKLKQSGINYTIFRLAG-F 147 (319)
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH-H
T ss_conf 94566778862088988988999999999849-988999613566668875677879999999986799859984739-9
Q ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-EECCEEEEECCCCCHHHHHHHHHHHHCCCC-
Q ss_conf 531032233343455899999998631013200179778984042010-102135762157727889999999825883-
Q gi|254780622|r 157 MAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-PLDPMRYIANRSSGQQGHAIAKSLAYFGAE- 234 (405)
Q Consensus 157 la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~- 234 (405)
T Consensus 148 ~q--------------~l~~~~a-------~pi~~~~~v~~~~~~~~ia~I---------~~~DVA~~~a~aL~~~~~~g 197 (319)
T CHL00194 148 FQ--------------GLISQYA-------IPILDSQTIWITGESTPIAYI---------DTQDAAKFALKSLSLPETKN 197 (319)
T ss_pred HH--------------HHHHHHH-------HHHHCCCCEEECCCCCCCCCC---------CHHHHHHHHHHHHCCCCCCC
T ss_conf 99--------------8899876-------776307857766998752887---------79999999999958977589
Q ss_pred -EEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCC
Q ss_conf -89984156677656746754657789999998505
Q gi|254780622|r 235 -VILISGPVSIADPPNVMTIHVERAEDMLQEVLKAL 269 (405)
Q Consensus 235 -V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~ 269 (405)
T Consensus 198 k~y~L~GP~------------a~T~~EIa~l~~~~~ 221 (319)
T CHL00194 198 KTFPLVGPK------------SWNSSEIISLCEQLS 221 (319)
T ss_pred CEEEEECCC------------CCCHHHHHHHHHHHH
T ss_conf 899954986------------389999999999985