HHsearch alignment for GI: 254780622 and conserved domain: PRK01438

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=94.60  E-value=0.38  Score=27.16  Aligned_cols=73  Identities=22%  Similarity=0.249  Sum_probs=39.1

Q ss_pred             CCCCCEEEEEEEC-HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHH--CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8885569999528-478999999999999879889998585686306989999974--7975820767887787743001
Q gi|254780622|r    2 DLSGKKIALIMCG-SVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAIS--NRRVYTHLLSYKEGYESNHIQL   78 (405)
Q Consensus         2 ~l~~k~IllgvtG-siaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt--~~~v~~~~~~~~~~~~~~Hi~l   78 (405)
T Consensus        11 ~~~gk~v~V~GlG~sG-----~s~a~~L~~~G~~v~~~D~~~~~~--~~~~~~~l~~~g~~~~~g---~~------~~~~   74 (481)
T PRK01438         11 DWSGLRVVVAGLGVSG-----FPAADALHELGASVTVVADGDDDR--SRERAALLEVLGATVRLG---DG------ETTL   74 (481)
T ss_pred             HCCCCEEEEEEECHHH-----HHHHHHHHHCCCEEEEEECCCCCC--CHHHHHHHHHCCCEEEEC---CC------HHHH
T ss_conf             7189989999575889-----999999996799899997998744--868999888549889968---87------5666


Q ss_pred             CCCCCEEEEEEC
Q ss_conf             144655788411
Q gi|254780622|r   79 ANECDLLVVAPA   90 (405)
Q Consensus        79 ~~~aD~~iVaPa   90 (405)
T Consensus        75 ~~~~d~vV~SPG   86 (481)
T PRK01438         75 PEGTELVVTSPG   86 (481)
T ss_pred             HCCCCEEEECCC
T ss_conf             248999998997