HHsearch alignment for GI: 254780622 and conserved domain: PRK08261

Probab=96.96  E-value=0.0031  Score=40.62  Aligned_cols=109  Identities=17%  Similarity=0.201  Sum_probs=58.9

Q ss_pred             HHHHHHHHCCCCCCCCCCEEEEEECCCHHEECC-------EEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---
Q ss_conf             999986310132001797789840420101021-------3576215772788999999982588389984156677---
Q gi|254780622|r  176 RQITWLLYKSKELLLKGKRALVTSGPTYEPLDP-------MRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA---  245 (405)
Q Consensus       176 ~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~-------VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~---  245 (405)
T Consensus       169 ~~~lrf~ls~~sa~v~gq~~~v~~~~~~~~~~~~~pL~GKVALVTGAArG-IG~AIA~~LAreGA~VVi~Di~~a~~~l~  247 (447)
T PRK08261        169 ESTLRFFLSPRSAYVSGQVVRVGAADAAPPADWDRPLAGKVALVTGAARG-IGAAIAEVLARDGAHVVCLDVPQAGDDLA  247 (447)
T ss_pred             HHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHH
T ss_conf             55242440666331125389963898889888788899998999172578-99999999998699999982711489999


Q ss_pred             ----CCCC----EEEEEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH
Q ss_conf             ----6567----46754657789999998505-8887997404444432
Q gi|254780622|r  246 ----DPPN----VMTIHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF  285 (405)
Q Consensus       246 ----~~~~----~~~i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~  285 (405)
T Consensus       248 ~~a~elgg~al~~DVt~~~a~~~lv~~~~~~~G~lDILVnNAGi~~~~~  296 (447)
T PRK08261        248 AVAARLGGTALALDITAPDAPAKIAEHLAERHGGLDIVVHNAGITRDKT  296 (447)
T ss_pred             HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
T ss_conf             9998709808995368999999999999996499989998997899977