HHsearch alignment for GI: 254780622 and conserved domain: TIGR00521

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; InterPro: IPR005252 This entry represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, (6.3.2.5 from EC), and decarboxylation, (4.1.1.36 from EC)) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. The amino-terminal region is responsible for the phosphopantothenoylcysteine decarboxylase activity . In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein [. It has been suggested that this bifunctional protein should be renamed coaBC ..
Probab=100.00  E-value=0  Score=687.98  Aligned_cols=395  Identities=41%  Similarity=0.612  Sum_probs=376.9

Q ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCC
Q ss_conf             8855699995284789999999999998798899985856863069899999747975--82076788778774300114
Q gi|254780622|r    3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRV--YTHLLSYKEGYESNHIQLAN   80 (405)
Q Consensus         3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v--~~~~~~~~~~~~~~Hi~l~~   80 (405)
T Consensus         1 l~~k~~~~~~~g~ia~~~~~~l~~~l~~~ga~v~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   80 (418)
T TIGR00521         1 LENKKILLGVTGGIAAYKTVELVRELVKAGAEVKVIMTEAAKKFITPLTLEALSGHKVLGVTELWGPIEHNALGHIDLAK   80 (418)
T ss_pred             CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             99865899843641456789999999856971699863223534122333332066432310000102344444443216


Q ss_pred             CCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCC-CCCEEEECCCCCHHHHHHHHHHHHHHHHHH-CCCCCCCCHHHHH
Q ss_conf             46557884111888988520245521466675227-996898405660000038899999998640-0013465212553
Q gi|254780622|r   81 ECDLLVVAPASANFIAHVAHGMVYDLASAILLAKG-DQPVLIAPAMNFMMWAKPATQRNVEILQKD-GCYFIGPESGAMA  158 (405)
Q Consensus        81 ~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~-~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~-g~~vi~P~~g~la  158 (405)
T Consensus        81 ~ad~~~~~P~t~~~~~k~~~g~ad~~~~~~~l~~~g~~P~~~~p~~~~~~~~~~~~~~n~~~l~~~~~~~~~~p~~g~~a  160 (418)
T TIGR00521        81 WADLILIAPATANTISKLAHGIADDLLSTTLLAASGGAPIILAPAMNENMYNNPAVQENLKRLKDDDGYIFIEPDSGLLA  160 (418)
T ss_pred             CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEE
T ss_conf             87779982420236888753221135788887506998679851111444201678888988752388378747752110


Q ss_pred             HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE
Q ss_conf             10322333434558999999986310132001797789840420101021357621577278899999998258838998
Q gi|254780622|r  159 ESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI  238 (405)
Q Consensus       159 ~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li  238 (405)
T Consensus       161 -c~~~g~g~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~g~t~e~~dp~r~~~n~s~G~~g~~~a~~~~~~Ga~v~~~  239 (418)
T TIGR00521       161 -CGDEGKGRLAEPETIVKAAERELSPKGSADLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLI  239 (418)
T ss_pred             -CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf             -0111555567988999999986235310322586489953876011133000045664347899999998659717998


Q ss_pred             ECCCCCCCCC-CEEEEEHHHHHHHHHHHH-HCC-CCC------EEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
Q ss_conf             4156677656-746754657789999998-505-888------7997404444432222101123345577510455218
Q gi|254780622|r  239 SGPVSIADPP-NVMTIHVERAEDMLQEVL-KAL-PVD------IAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN  309 (405)
Q Consensus       239 ~g~~~~~~~~-~~~~i~v~t~~em~~~~~-~~~-~~D------~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~  309 (405)
T Consensus       240 ~g~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~p~~~~~aa~~d~~~~~~~~~k~~~~-~~~~~~~~l~~~  318 (418)
T TIGR00521       240 AGPVSLPTPPGGVKSIKVLTAEEMLEAALNELAKDFDKHALKPIFIGAAAVADFKPKTVFEGKIKKS-QGEELSLKLKKN  318 (418)
T ss_pred             ECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCC-CCCCEEEEEECC
T ss_conf             4477877675202344122089999999999873100000111321112220231210000022103-677405763057


Q ss_pred             HHHHHHHHHCCCCCCEEEEEECCCCH----HHHHHHHHHH--HCC---CCEEEEECCCCCCCCCCCCCEEEEEECCCC-E
Q ss_conf             06898876214899589998114123----8999999999--749---989999205776777776611899983698-5
Q gi|254780622|r  310 PDILKIIGHHQCRPSIVVGFAAETQC----IEQNAREKLL--NKG---ADFIVSNCILPDTGFVGKEWNKVSIVFPDK-I  379 (405)
Q Consensus       310 pdIL~~i~~~k~~~~~lVGFkaET~~----l~~~A~~Kl~--~K~---~D~IVAN~i~~~~~~fgsd~n~v~li~~~~-~  379 (405)
T Consensus       319 p~~~~~~~~~~~~~~~~~Gf~ae~~~~~~~~~~~a~~~l~p~~~ng~dl~~~~an~~~~~~~gfg~~~n~~~~~~~~g~~  398 (418)
T TIGR00521       319 PDIIKEVGKIKKHEQVIVGFKAETNDDNDELIKYAKEKLKPFKKNGKDLDLIVANDVSQPGRGFGSDENEVYIFSKHGHE  398 (418)
T ss_pred             HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCE
T ss_conf             15788765216766358887303688566888888985204440787101587414556766667543258998458752


Q ss_pred             EECCCCCHHHHHHHHHHHHH
Q ss_conf             97278998999999999999
Q gi|254780622|r  380 EEYPELPKAEVADRLCHLIV  399 (405)
Q Consensus       380 ~~~~~~sK~~iA~~Il~~i~  399 (405)
T Consensus       399 ~~~~~~~k~~~~~~~~~~~~  418 (418)
T TIGR00521       399 KELPLMSKLELAERILDEIL  418 (418)
T ss_pred             EECCCHHHHHHHHHHHHHHC
T ss_conf             32020116789999998719