HHsearch alignment for GI: 254780622 and conserved domain: TIGR01777
>TIGR01777 yfcH conserved hypothetical protein TIGR01777; InterPro: IPR010099 This entry represents proteins of unknown function including the Escherichia coli YfcH protein..
Probab=90.22 E-value=0.43 Score=26.83 Aligned_cols=110 Identities=14% Similarity=0.109 Sum_probs=62.9
Q ss_pred C-CCHHHHHHHHHHHHCCCCEEEEECCCC-CCCCCCEEEEEHHHH----HHHHHHHH--HCCCCCEEEEEHHHHHHHHHH
Q ss_conf 7-727889999999825883899841566-776567467546577----89999998--505888799740444443222
Q gi|254780622|r 216 S-SGQQGHAIAKSLAYFGAEVILISGPVS-IADPPNVMTIHVERA----EDMLQEVL--KALPVDIAVMVSAVSDWRFPK 287 (405)
Q Consensus 216 S-SGk~G~~iA~~~~~~Ga~V~li~g~~~-~~~~~~~~~i~v~t~----~em~~~~~--~~~~~D~~I~aAAVSDf~~~~ 287 (405)
T Consensus 6 gnTGfiG~~L~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~W~~l~~~DaviNLAG~~i~~P-~ 83 (307)
T TIGR01777 6 GNTGFIGRALTQRLTKSGHEVTILTRSPQAESNTKKVGYKNWLAEGKLGIVIAE-SGWSALEGADAVINLAGEPIADP-K 83 (307)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCH-HCCCCCCCCCEEEECCCCCCCCC-C
T ss_conf 330237899999998479989999616864320002554455552212452072-20566788627985568885778-8
Q ss_pred HHHCCCCCCCCCCCCEEEEEECHHHHHHHHH---CCCCCCEEEEEEC
Q ss_conf 2101123345577510455218068988762---1489958999811
Q gi|254780622|r 288 IAGTKIKRKDIGDTMRIDLMENPDILKIIGH---HQCRPSIVVGFAA 331 (405)
Q Consensus 288 ~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~---~k~~~~~lVGFka 331 (405)
T Consensus 84 RWt~~~K~-~i---~~SRi~~T~~L~~~i~~~~r~~~~P~~~isaSA 126 (307)
T TIGR01777 84 RWTEERKQ-EI---RDSRIDTTRALVEAIAAAPRAEQKPKVFISASA 126 (307)
T ss_pred CCCHHHHH-HH---HHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
T ss_conf 87877757-56---523347899999999846566788716885016