HHsearch alignment for GI: 254780622 and conserved domain: cd05211
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.65 E-value=0.59 Score=25.94 Aligned_cols=30 Identities=33% Similarity=0.438 Sum_probs=13.4
Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 8885569999528478999999999999879889
Q gi|254780622|r 2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVV 35 (405)
Q Consensus 2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V 35 (405)
T Consensus 20 ~l~g~~vaVqGfGnVG~~----~a~~l~~~Gakv 49 (217)
T cd05211 20 SLEGLTVAVQGLGNVGWG----LAKKLAEEGGKV 49 (217)
T ss_pred CCCCCEEEEECCCHHHHH----HHHHHHHCCCEE
T ss_conf 857999999898899999----999999859989