Query gi|254780622|ref|YP_003065035.1| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 405 No_of_seqs 175 out of 2564 Neff 6.1 Searched_HMMs 39220 Date Sun May 29 21:25:59 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780622.hhm -d /home/congqian_1/database/cdd/Cdd.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 PRK13982 bifunctional SbtC-lik 100.0 0 0 992.1 37.4 402 1-404 67-473 (476) 2 PRK05579 bifunctional phosphop 100.0 0 0 968.2 40.3 390 3-399 2-392 (392) 3 COG0452 Dfp Phosphopantothenoy 100.0 0 0 738.2 32.8 390 2-403 1-392 (392) 4 TIGR00521 coaBC_dfp phosphopan 100.0 0 0 688.0 32.1 395 3-399 1-418 (418) 5 PRK07313 phosphopantothenoylcy 100.0 0 0 442.5 17.6 178 4-182 1-179 (180) 6 pfam04127 DFP DNA / pantothena 100.0 0 0 429.6 18.3 189 191-388 1-197 (197) 7 PRK09620 hypothetical protein; 100.0 0 0 420.3 20.8 206 190-404 1-225 (229) 8 PRK06732 phosphopantothenate-- 100.0 0 0 419.0 20.8 200 193-401 1-227 (228) 9 TIGR02114 coaB_strep phosphopa 100.0 0 0 322.0 14.2 201 193-401 1-252 (253) 10 KOG0672 consensus 100.0 1.8E-42 0 293.0 7.5 178 4-184 18-207 (218) 11 PRK08305 spoVFB dipicolinate s 100.0 1.3E-40 2.8E-45 281.1 15.6 172 1-183 1-183 (195) 12 TIGR02113 coaC_strep phosphopa 100.0 2.1E-41 0 286.3 11.2 174 6-180 1-175 (177) 13 pfam02441 Flavoprotein Flavopr 100.0 1.2E-31 3E-36 223.5 12.8 116 6-124 1-118 (118) 14 KOG2728 consensus 100.0 2.1E-28 5.3E-33 202.6 14.8 202 190-401 28-292 (302) 15 PRK06029 3-octaprenyl-4-hydrox 99.9 3.9E-23 9.9E-28 168.7 12.7 159 6-181 2-169 (187) 16 PRK05920 aromatic acid decarbo 99.8 2E-19 5E-24 144.9 15.4 161 5-181 4-185 (205) 17 TIGR00421 ubiX_pad polyprenyl 99.8 8.3E-18 2.1E-22 134.4 13.2 157 7-181 1-166 (181) 18 COG0163 UbiX 3-polyprenyl-4-hy 99.8 4.3E-17 1.1E-21 129.8 14.5 156 5-181 2-171 (191) 19 TIGR02852 spore_dpaB dipicolin 99.7 1.8E-17 4.5E-22 132.3 10.3 170 6-194 1-182 (188) 20 TIGR02700 flavo_MJ0208 archaeo 99.7 6.8E-17 1.7E-21 128.5 8.3 117 7-124 1-130 (237) 21 TIGR02699 archaeo_AfpA archaeo 99.7 2.9E-16 7.3E-21 124.5 7.0 143 7-151 1-167 (176) 22 COG1036 Archaeal flavoproteins 99.6 1.6E-14 4.1E-19 113.2 9.3 143 4-149 7-173 (187) 23 PRK06550 fabG 3-ketoacyl-(acyl 97.7 0.00021 5.2E-09 48.2 7.8 108 189-316 2-111 (237) 24 PRK07577 short chain dehydroge 97.7 0.00023 6E-09 47.8 8.0 81 190-286 1-84 (234) 25 PRK07856 short chain dehydroge 97.7 0.00031 7.8E-09 47.1 8.3 107 187-314 3-116 (254) 26 PRK05565 fabG 3-ketoacyl-(acyl 97.6 0.00024 6.2E-09 47.7 6.8 184 189-398 2-227 (247) 27 PRK06523 short chain dehydroge 97.6 0.00064 1.6E-08 45.0 8.9 154 187-360 4-183 (260) 28 PRK12825 fabG 3-ketoacyl-(acyl 97.6 0.00049 1.2E-08 45.8 8.3 112 189-320 4-135 (250) 29 PRK12826 3-ketoacyl-(acyl-carr 97.6 0.00023 5.8E-09 47.9 6.4 122 188-329 2-142 (253) 30 PRK06171 sorbitol-6-phosphate 97.5 0.00074 1.9E-08 44.6 8.6 78 189-282 6-89 (266) 31 PRK08159 enoyl-(acyl carrier p 97.5 0.00022 5.5E-09 48.0 5.7 37 188-238 6-42 (272) 32 PRK07201 short chain dehydroge 97.5 0.0004 1E-08 46.3 7.1 185 187-401 371-593 (663) 33 PRK06505 enoyl-(acyl carrier p 97.5 0.00017 4.4E-09 48.6 5.0 34 1-38 1-39 (271) 34 PRK06398 aldose dehydrogenase; 97.5 0.00053 1.4E-08 45.5 7.5 120 188-330 2-131 (256) 35 PRK08945 short chain dehydroge 97.5 0.00049 1.3E-08 45.7 7.2 84 183-282 4-105 (245) 36 PRK05653 fabG 3-ketoacyl-(acyl 97.5 0.00059 1.5E-08 45.2 7.4 108 189-316 2-124 (246) 37 PRK06500 short chain dehydroge 97.4 0.00069 1.8E-08 44.8 7.1 81 189-285 3-95 (249) 38 PRK12428 3-alpha-hydroxysteroi 97.4 0.0011 2.8E-08 43.5 8.2 33 1-37 1-34 (261) 39 PRK12828 short chain dehydroge 97.4 0.00082 2.1E-08 44.3 7.5 180 188-398 3-218 (239) 40 PRK07831 short chain dehydroge 97.4 0.00059 1.5E-08 45.3 6.7 120 187-327 11-152 (261) 41 PRK05866 short chain dehydroge 97.4 0.00062 1.6E-08 45.1 6.7 184 186-399 34-256 (290) 42 PRK08416 7-alpha-hydroxysteroi 97.4 0.00081 2.1E-08 44.3 7.0 78 188-281 4-98 (260) 43 PRK09242 tropinone reductase; 97.4 0.00091 2.3E-08 44.0 7.2 160 188-371 6-201 (258) 44 PRK05557 fabG 3-ketoacyl-(acyl 97.4 0.00038 9.8E-09 46.4 5.2 107 189-315 2-124 (248) 45 PRK08220 2,3-dihydroxybenzoate 97.4 0.00054 1.4E-08 45.5 5.9 108 188-315 4-118 (253) 46 PRK08085 gluconate 5-dehydroge 97.4 0.00048 1.2E-08 45.8 5.6 108 189-316 6-128 (254) 47 PRK07533 enoyl-(acyl carrier p 97.3 0.0011 2.7E-08 43.6 7.3 34 1-38 2-38 (254) 48 PRK08063 enoyl-(acyl carrier p 97.3 0.00088 2.2E-08 44.1 6.8 104 190-313 2-121 (250) 49 PRK06196 oxidoreductase; Provi 97.3 0.00073 1.9E-08 44.6 6.3 77 189-281 23-110 (316) 50 PRK07370 enoyl-(acyl carrier p 97.3 0.00053 1.4E-08 45.5 5.6 80 189-282 4-100 (259) 51 PRK08936 glucose-1-dehydrogena 97.3 0.001 2.7E-08 43.6 6.8 100 189-309 4-120 (261) 52 PRK05854 short chain dehydroge 97.3 0.0013 3.2E-08 43.1 7.0 39 2-45 11-50 (314) 53 PRK07666 fabG 3-ketoacyl-(acyl 97.3 0.0014 3.7E-08 42.8 7.3 183 189-400 3-222 (238) 54 TIGR03325 BphB_TodD cis-2,3-di 97.3 0.0014 3.5E-08 42.9 7.1 81 189-285 2-94 (262) 55 PRK07984 enoyl-(acyl carrier p 97.2 0.0012 3.1E-08 43.3 6.7 31 3-37 4-37 (262) 56 PRK12746 short chain dehydroge 97.2 0.0011 2.7E-08 43.6 6.3 188 189-398 3-234 (254) 57 PRK06603 enoyl-(acyl carrier p 97.2 0.00057 1.5E-08 45.3 4.9 81 189-284 5-100 (260) 58 PRK06077 fabG 3-ketoacyl-(acyl 97.2 0.0013 3.3E-08 43.0 6.7 107 190-316 1-123 (249) 59 PRK12744 short chain dehydroge 97.2 0.0011 2.9E-08 43.4 6.3 112 187-318 3-133 (257) 60 PRK09072 short chain dehydroge 97.2 0.002 5E-08 41.9 7.5 35 1-38 1-35 (262) 61 PRK06197 short chain dehydroge 97.2 0.0016 4.1E-08 42.4 7.1 39 2-44 13-51 (306) 62 PRK08415 enoyl-(acyl carrier p 97.2 0.00053 1.4E-08 45.5 4.5 35 1-39 1-38 (274) 63 PRK06198 short chain dehydroge 97.2 0.0015 3.8E-08 42.6 6.8 121 189-330 3-143 (268) 64 PRK06200 2,3-dihydroxy-2,3-dih 97.2 0.0019 4.9E-08 42.0 7.2 80 189-284 3-94 (263) 65 PRK07231 fabG 3-ketoacyl-(acyl 97.2 0.0023 5.8E-08 41.5 7.5 78 189-282 3-93 (250) 66 PRK07035 short chain dehydroge 97.2 0.002 5.1E-08 41.8 7.2 79 189-283 5-98 (252) 67 PRK06124 gluconate 5-dehydroge 97.2 0.002 5.1E-08 41.8 7.2 162 188-373 10-205 (259) 68 PRK12429 3-hydroxybutyrate deh 97.2 0.0015 3.9E-08 42.6 6.5 80 190-285 2-96 (258) 69 PRK12742 oxidoreductase; Provi 97.1 0.0018 4.5E-08 42.2 6.7 81 189-285 3-90 (237) 70 PRK07889 enoyl-(acyl carrier p 97.1 0.0023 5.8E-08 41.5 7.3 79 189-281 4-95 (256) 71 PRK07067 sorbitol dehydrogenas 97.1 0.0025 6.3E-08 41.2 7.4 121 189-330 2-138 (256) 72 PRK06484 short chain dehydroge 97.1 0.0096 2.5E-07 37.4 10.4 148 161-314 205-389 (530) 73 PRK05867 short chain dehydroge 97.1 0.0018 4.7E-08 42.1 6.7 101 189-309 6-121 (253) 74 PRK12823 benD 1,6-dihydroxycyc 97.1 0.0024 6.1E-08 41.3 7.2 79 189-283 5-97 (260) 75 PRK05872 short chain dehydroge 97.1 0.0028 7.2E-08 40.9 7.6 82 188-285 5-98 (296) 76 PRK08217 fabG 3-ketoacyl-(acyl 97.1 0.0025 6.4E-08 41.2 7.3 77 189-281 2-93 (253) 77 PRK06841 short chain dehydroge 97.1 0.0027 7E-08 41.0 7.4 122 187-330 10-147 (255) 78 PRK08264 short chain dehydroge 97.1 0.0042 1.1E-07 39.8 8.3 80 189-284 2-84 (235) 79 PRK07774 short chain dehydroge 97.1 0.0025 6.4E-08 41.2 7.1 77 189-281 3-94 (250) 80 PRK08993 2-deoxy-D-gluconate 3 97.1 0.002 5.2E-08 41.8 6.6 82 188-285 6-100 (253) 81 PRK07060 short chain dehydroge 97.1 0.0023 5.9E-08 41.4 6.9 124 187-330 4-136 (245) 82 COG1086 Predicted nucleoside-d 97.1 0.0079 2E-07 38.0 9.4 133 118-282 180-337 (588) 83 PRK07814 short chain dehydroge 97.0 0.0026 6.7E-08 41.1 6.8 102 189-310 7-123 (263) 84 PRK09186 flagellin modificatio 97.0 0.003 7.8E-08 40.7 7.1 77 189-281 1-93 (255) 85 PRK08690 enoyl-(acyl carrier p 97.0 0.0026 6.7E-08 41.1 6.8 35 189-237 3-37 (261) 86 PRK08628 short chain dehydroge 97.0 0.0027 6.9E-08 41.0 6.8 82 188-285 3-98 (258) 87 PRK12827 short chain dehydroge 97.0 0.0028 7.2E-08 40.9 6.9 152 189-360 3-191 (251) 88 PRK07825 short chain dehydroge 97.0 0.003 7.8E-08 40.7 7.0 81 189-285 2-93 (273) 89 PRK06997 enoyl-(acyl carrier p 97.0 0.0036 9.1E-08 40.2 7.3 17 223-239 172-188 (260) 90 PRK07523 gluconate 5-dehydroge 97.0 0.0042 1.1E-07 39.7 7.7 159 189-371 6-195 (251) 91 PRK07776 consensus 97.0 0.0046 1.2E-07 39.5 7.8 160 188-370 4-194 (252) 92 PRK07791 short chain dehydroge 97.0 0.0016 4.1E-08 42.4 5.4 81 189-285 3-107 (285) 93 TIGR03206 benzo_BadH 2-hydroxy 97.0 0.0035 8.9E-08 40.3 7.0 119 190-330 1-138 (250) 94 PRK13394 3-hydroxybutyrate deh 97.0 0.0032 8.2E-08 40.5 6.9 108 189-316 4-126 (262) 95 PRK06346 consensus 97.0 0.0033 8.5E-08 40.4 6.9 78 189-282 2-94 (251) 96 PRK12481 2-deoxy-D-gluconate 3 97.0 0.0032 8.2E-08 40.5 6.8 100 189-309 5-118 (251) 97 PRK12829 short chain dehydroge 97.0 0.0046 1.2E-07 39.5 7.6 108 188-314 7-127 (264) 98 PRK06701 short chain dehydroge 97.0 0.0028 7.1E-08 40.9 6.4 110 188-316 41-166 (289) 99 PRK06114 short chain dehydroge 97.0 0.0037 9.4E-08 40.1 7.0 103 188-310 12-130 (262) 100 PRK08213 gluconate 5-dehydroge 97.0 0.0036 9.2E-08 40.2 6.9 107 189-315 9-130 (259) 101 PRK08261 fabG 3-ketoacyl-(acyl 97.0 0.0031 7.9E-08 40.6 6.5 109 176-285 169-296 (447) 102 PRK10675 UDP-galactose-4-epime 97.0 0.0052 1.3E-07 39.1 7.6 19 21-39 13-31 (338) 103 PRK12939 short chain dehydroge 96.9 0.004 1E-07 39.9 7.0 121 188-330 3-142 (250) 104 PRK06138 short chain dehydroge 96.9 0.0042 1.1E-07 39.8 7.1 102 189-310 2-117 (252) 105 PRK06079 enoyl-(acyl carrier p 96.9 0.0035 9E-08 40.2 6.7 36 189-238 4-39 (252) 106 PRK08226 short chain dehydroge 96.9 0.0045 1.1E-07 39.6 7.2 81 189-285 3-97 (263) 107 PRK06935 2-deoxy-D-gluconate 3 96.9 0.003 7.7E-08 40.7 6.3 106 189-314 12-131 (258) 108 PRK07097 gluconate 5-dehydroge 96.9 0.0046 1.2E-07 39.5 7.2 157 189-369 7-197 (265) 109 PRK09134 short chain dehydroge 96.9 0.0044 1.1E-07 39.6 7.1 81 189-285 6-102 (256) 110 PRK07677 short chain dehydroge 96.9 0.004 1E-07 39.9 6.8 105 190-314 1-120 (254) 111 PRK06463 fabG 3-ketoacyl-(acyl 96.9 0.0031 7.9E-08 40.6 6.2 82 188-285 3-94 (254) 112 PRK08642 fabG 3-ketoacyl-(acyl 96.9 0.0037 9.3E-08 40.1 6.6 76 189-280 3-92 (254) 113 PRK07041 short chain dehydroge 96.9 0.0059 1.5E-07 38.8 7.5 32 1-36 3-35 (240) 114 PRK06139 short chain dehydroge 96.9 0.0041 1.1E-07 39.8 6.7 36 1-39 1-37 (324) 115 PRK05717 oxidoreductase; Valid 96.9 0.0071 1.8E-07 38.3 7.9 109 188-315 6-127 (255) 116 PRK08263 short chain dehydroge 96.9 0.0049 1.2E-07 39.3 7.0 50 191-243 128-183 (275) 117 PRK12937 short chain dehydroge 96.9 0.0043 1.1E-07 39.7 6.7 122 189-330 2-139 (245) 118 PRK06949 short chain dehydroge 96.9 0.0029 7.4E-08 40.8 5.8 83 187-285 4-101 (258) 119 PRK08278 short chain dehydroge 96.9 0.0046 1.2E-07 39.5 6.8 34 1-38 2-36 (273) 120 PRK08862 short chain dehydroge 96.9 0.0056 1.4E-07 38.9 7.3 17 223-239 167-183 (227) 121 PRK05786 fabG 3-ketoacyl-(acyl 96.9 0.005 1.3E-07 39.2 7.0 33 1-37 1-34 (238) 122 PRK05876 short chain dehydroge 96.9 0.0041 1E-07 39.8 6.5 81 189-285 3-98 (275) 123 PRK07890 short chain dehydroge 96.8 0.0062 1.6E-07 38.7 7.3 33 190-238 3-35 (258) 124 PRK07326 short chain dehydroge 96.8 0.0055 1.4E-07 39.0 7.1 81 190-286 3-96 (235) 125 PRK07062 short chain dehydroge 96.8 0.0052 1.3E-07 39.2 6.9 108 187-314 3-127 (265) 126 KOG1201 consensus 96.8 0.0049 1.2E-07 39.3 6.7 190 179-401 25-256 (300) 127 PRK06125 short chain dehydroge 96.8 0.0069 1.8E-07 38.4 7.3 35 189-239 4-38 (259) 128 TIGR03466 HpnA hopanoid-associ 96.8 0.0021 5.3E-08 41.7 4.6 28 10-41 6-33 (328) 129 PRK06172 short chain dehydroge 96.8 0.0058 1.5E-07 38.8 6.9 103 188-309 3-120 (253) 130 PRK08324 short chain dehydroge 96.8 0.008 2E-07 38.0 7.6 109 186-314 415-537 (676) 131 PRK08265 short chain dehydroge 96.8 0.0078 2E-07 38.0 7.5 77 189-281 3-91 (261) 132 PRK07576 short chain dehydroge 96.8 0.0065 1.7E-07 38.5 7.1 20 219-238 19-38 (260) 133 PRK12935 acetoacetyl-CoA reduc 96.8 0.0055 1.4E-07 39.0 6.7 81 189-285 3-99 (247) 134 PRK08339 short chain dehydroge 96.8 0.0099 2.5E-07 37.4 7.9 33 1-37 4-37 (263) 135 PRK07063 short chain dehydroge 96.8 0.006 1.5E-07 38.8 6.8 106 189-314 4-125 (259) 136 PRK06057 short chain dehydroge 96.8 0.0078 2E-07 38.0 7.3 79 188-282 3-91 (255) 137 PRK06227 consensus 96.8 0.0064 1.6E-07 38.6 6.8 102 189-310 2-118 (256) 138 PRK07806 short chain dehydroge 96.7 0.0072 1.8E-07 38.3 7.1 18 222-239 165-182 (248) 139 PRK07109 short chain dehydroge 96.7 0.0076 1.9E-07 38.1 7.1 36 2-40 5-40 (338) 140 PRK08594 enoyl-(acyl carrier p 96.7 0.0082 2.1E-07 37.9 7.1 32 1-36 2-36 (256) 141 PRK08703 short chain dehydroge 96.7 0.0083 2.1E-07 37.8 7.1 76 189-280 3-97 (239) 142 PRK05875 short chain dehydroge 96.7 0.0083 2.1E-07 37.9 7.0 17 223-239 173-189 (277) 143 PRK07479 consensus 96.7 0.0084 2.1E-07 37.8 7.1 33 190-238 3-35 (252) 144 PRK06113 7-alpha-hydroxysteroi 96.7 0.0092 2.3E-07 37.6 7.2 84 186-285 5-103 (255) 145 PRK07478 short chain dehydroge 96.7 0.0077 2E-07 38.1 6.7 81 189-285 3-99 (254) 146 PRK06128 oxidoreductase; Provi 96.7 0.0073 1.9E-07 38.2 6.6 110 187-315 50-176 (300) 147 PRK08589 short chain dehydroge 96.6 0.011 2.7E-07 37.2 7.3 79 189-283 3-95 (272) 148 PRK12747 short chain dehydroge 96.6 0.0083 2.1E-07 37.9 6.6 79 190-284 2-102 (252) 149 PRK12936 3-ketoacyl-(acyl-carr 96.6 0.012 3E-07 36.9 7.4 107 189-315 3-121 (245) 150 PRK08303 short chain dehydroge 96.6 0.0053 1.4E-07 39.1 5.5 51 192-242 152-208 (305) 151 PRK06194 hypothetical protein; 96.6 0.0089 2.3E-07 37.7 6.5 33 2-38 3-36 (301) 152 PRK08277 D-mannonate oxidoredu 96.6 0.013 3.3E-07 36.6 7.2 75 189-279 7-96 (278) 153 PRK12748 3-ketoacyl-(acyl-carr 96.5 0.012 3E-07 36.8 6.8 17 223-239 180-196 (257) 154 PRK12938 acetyacetyl-CoA reduc 96.5 0.009 2.3E-07 37.6 6.2 158 190-369 1-191 (246) 155 PRK07832 short chain dehydroge 96.5 0.012 3.1E-07 36.8 6.8 78 193-286 1-94 (272) 156 PRK07775 short chain dehydroge 96.5 0.013 3.4E-07 36.5 7.0 21 219-239 21-41 (275) 157 PRK10217 dTDP-glucose 4,6-dehy 96.5 0.024 6.1E-07 34.9 8.1 30 6-39 2-32 (355) 158 PRK06182 short chain dehydroge 96.4 0.014 3.6E-07 36.4 6.9 48 192-242 126-179 (273) 159 PRK12859 3-ketoacyl-(acyl-carr 96.4 0.018 4.6E-07 35.7 7.3 83 189-285 3-111 (257) 160 PRK06720 hypothetical protein; 96.4 0.016 4E-07 36.1 7.0 83 186-284 10-107 (169) 161 PRK05855 short chain dehydroge 96.4 0.037 9.4E-07 33.7 8.8 168 91-285 202-407 (582) 162 PRK06300 enoyl-(acyl carrier p 96.4 0.029 7.3E-07 34.4 8.2 32 1-36 4-38 (298) 163 PRK07792 fabG 3-ketoacyl-(acyl 96.4 0.017 4.3E-07 35.9 7.0 45 192-239 145-194 (303) 164 PRK09135 pteridine reductase; 96.4 0.017 4.3E-07 35.9 7.0 81 189-285 3-100 (249) 165 PRK07985 oxidoreductase; Provi 96.4 0.017 4.2E-07 35.9 6.9 78 188-281 45-139 (294) 166 PRK08251 short chain dehydroge 96.3 0.017 4.3E-07 35.9 6.7 79 192-286 2-97 (248) 167 PRK06181 short chain dehydroge 96.3 0.018 4.7E-07 35.6 6.8 78 192-285 1-93 (263) 168 PRK06123 short chain dehydroge 96.2 0.023 5.9E-07 35.0 7.0 158 190-368 1-195 (249) 169 PRK12367 short chain dehydroge 96.2 0.023 6E-07 35.0 6.8 79 188-284 13-96 (250) 170 PRK06483 short chain dehydroge 96.2 0.019 4.9E-07 35.5 6.4 75 192-282 2-86 (236) 171 PRK07424 bifunctional sterol d 96.1 0.026 6.6E-07 34.7 6.7 185 173-401 166-374 (410) 172 cd01078 NAD_bind_H4MPT_DH NADP 96.1 0.032 8.1E-07 34.1 7.1 50 174-240 11-60 (194) 173 PRK08340 glucose-1-dehydrogena 96.1 0.029 7.4E-07 34.4 6.9 22 217-238 9-30 (259) 174 PRK10084 dTDP-glucose 4,6 dehy 96.1 0.041 1E-06 33.4 7.7 19 21-39 13-31 (352) 175 PRK12384 sorbitol-6-phosphate 96.0 0.029 7.5E-07 34.3 6.8 78 192-285 2-96 (259) 176 smart00822 PKS_KR This enzymat 96.0 0.027 6.9E-07 34.5 6.6 77 194-286 2-97 (180) 177 PRK06914 short chain dehydroge 96.0 0.032 8.3E-07 34.0 6.9 45 192-239 133-182 (280) 178 TIGR03589 PseB UDP-N-acetylglu 96.0 0.053 1.3E-06 32.7 7.8 35 3-41 2-38 (324) 179 pfam00106 adh_short short chai 95.9 0.039 9.9E-07 33.5 6.9 69 217-285 9-95 (167) 180 PRK06484 short chain dehydroge 95.9 0.056 1.4E-06 32.5 7.6 34 4-40 4-37 (530) 181 PRK06947 glucose-1-dehydrogena 95.9 0.044 1.1E-06 33.2 7.0 77 189-281 3-95 (252) 182 PRK07024 short chain dehydroge 95.8 0.052 1.3E-06 32.7 7.2 74 193-282 3-89 (256) 183 PRK06179 short chain dehydroge 95.8 0.053 1.4E-06 32.6 7.2 45 192-239 125-174 (270) 184 PRK11908 NAD-dependent epimera 95.7 0.065 1.7E-06 32.1 7.5 31 6-40 2-34 (347) 185 COG0451 WcaG Nucleoside-diphos 95.6 0.069 1.8E-06 31.9 7.3 31 10-41 3-33 (314) 186 pfam01370 Epimerase NAD depend 95.6 0.032 8.1E-07 34.1 5.4 97 216-321 6-108 (235) 187 pfam04321 RmlD_sub_bind RmlD s 95.5 0.052 1.3E-06 32.7 6.4 33 21-54 11-43 (284) 188 PRK07102 short chain dehydroge 95.5 0.079 2E-06 31.5 7.3 23 216-239 10-32 (243) 189 PRK08643 acetoin reductase; Va 95.5 0.063 1.6E-06 32.2 6.6 98 192-309 2-114 (256) 190 PRK12745 3-ketoacyl-(acyl-carr 95.5 0.066 1.7E-06 32.0 6.7 79 190-284 3-97 (259) 191 PRK07707 consensus 95.4 0.073 1.9E-06 31.8 6.6 21 218-238 12-32 (239) 192 PRK09291 short chain dehydroge 95.3 0.075 1.9E-06 31.7 6.6 49 191-242 124-178 (257) 193 PRK12743 acetoin dehydrogenase 95.3 0.082 2.1E-06 31.4 6.6 68 218-285 12-95 (253) 194 PRK08177 short chain dehydroge 95.2 0.11 2.8E-06 30.7 7.2 20 220-239 13-32 (225) 195 PRK08017 short chain dehydroge 95.2 0.058 1.5E-06 32.4 5.8 29 211-239 142-175 (256) 196 PRK07074 short chain dehydroge 95.1 0.14 3.4E-06 30.1 7.4 77 192-284 2-90 (256) 197 pfam02719 Polysacc_synt_2 Poly 95.1 0.19 4.8E-06 29.1 8.0 30 11-41 2-31 (280) 198 PRK07454 short chain dehydroge 94.9 0.12 3E-06 30.5 6.5 79 191-285 5-98 (241) 199 COG2910 Putative NADH-flavin r 94.8 0.067 1.7E-06 32.0 5.1 163 216-400 8-199 (211) 200 COG1028 FabG Dehydrogenases wi 94.8 0.19 4.9E-06 29.1 7.5 38 1-42 1-39 (251) 201 PRK12824 acetoacetyl-CoA reduc 94.8 0.11 2.9E-06 30.6 6.2 117 192-330 2-138 (245) 202 PRK05650 short chain dehydroge 94.8 0.095 2.4E-06 31.0 5.8 20 220-239 12-31 (270) 203 PRK01438 murD UDP-N-acetylmura 94.6 0.38 9.7E-06 27.2 8.7 73 2-90 11-86 (481) 204 PRK06180 short chain dehydroge 94.6 0.15 3.9E-06 29.7 6.5 49 191-242 129-183 (277) 205 PRK06101 short chain dehydroge 94.6 0.23 5.8E-06 28.6 7.4 18 222-239 153-170 (241) 206 pfam00208 ELFV_dehydrog Glutam 94.6 0.39 1E-05 27.1 8.6 46 189-251 29-75 (237) 207 cd01076 NAD_bind_1_Glu_DH NAD( 94.5 0.41 1E-05 27.0 9.2 47 188-251 27-74 (227) 208 PRK06482 short chain dehydroge 94.5 0.18 4.5E-06 29.3 6.6 46 191-239 127-177 (276) 209 PRK07904 short chain dehydroge 94.5 0.21 5.5E-06 28.8 7.0 14 220-233 20-33 (253) 210 PRK09730 hypothetical protein; 94.4 0.17 4.4E-06 29.4 6.5 65 217-281 10-90 (247) 211 TIGR01283 nifE nitrogenase MoF 94.4 0.071 1.8E-06 31.8 4.5 73 186-276 331-413 (470) 212 cd01076 NAD_bind_1_Glu_DH NAD( 94.4 0.15 3.8E-06 29.8 6.1 134 1-162 27-165 (227) 213 PRK06940 short chain dehydroge 94.3 0.17 4.3E-06 29.4 6.3 37 2-44 2-38 (277) 214 cd05313 NAD_bind_2_Glu_DH NAD( 94.3 0.26 6.7E-06 28.2 7.2 66 178-260 24-90 (254) 215 PRK11150 rfaD ADP-L-glycero-D- 94.3 0.28 7.1E-06 28.0 7.2 29 10-39 2-31 (308) 216 KOG1205 consensus 94.2 0.29 7.3E-06 28.0 7.2 28 122-149 116-146 (282) 217 PRK05993 short chain dehydroge 94.2 0.27 7E-06 28.1 7.1 49 191-242 127-181 (277) 218 KOG1210 consensus 94.2 0.16 4.2E-06 29.5 5.9 20 220-239 195-214 (331) 219 KOG1502 consensus 94.1 0.078 2E-06 31.6 4.2 34 9-43 8-41 (327) 220 PRK08220 2,3-dihydroxybenzoate 94.1 0.24 6.2E-06 28.4 6.8 34 1-38 4-38 (253) 221 PRK05693 short chain dehydroge 94.0 0.31 7.9E-06 27.7 7.0 46 191-239 122-172 (274) 222 COG0623 FabI Enoyl-[acyl-carri 93.9 0.29 7.3E-06 28.0 6.8 40 1-46 2-44 (259) 223 COG0300 DltE Short-chain dehyd 93.9 0.44 1.1E-05 26.7 7.7 187 189-400 3-226 (265) 224 KOG1371 consensus 93.8 0.23 5.8E-06 28.6 6.2 33 5-40 2-34 (343) 225 PRK10538 3-hydroxy acid dehydr 93.7 0.38 9.7E-06 27.2 7.1 63 220-282 12-86 (248) 226 cd05211 NAD_bind_Glu_Leu_Phe_V 93.6 0.59 1.5E-05 25.9 9.2 30 2-35 20-49 (217) 227 PRK09009 C factor cell-cell si 93.6 0.42 1.1E-05 26.9 7.1 71 194-281 2-78 (235) 228 CHL00194 ycf39 Ycf39; Provisio 93.5 0.46 1.2E-05 26.7 7.2 204 8-269 4-221 (319) 229 PRK08267 short chain dehydroge 93.5 0.37 9.4E-06 27.3 6.7 19 220-238 13-31 (258) 230 pfam00208 ELFV_dehydrog Glutam 93.5 0.27 6.9E-06 28.1 6.0 132 2-161 29-168 (237) 231 PRK04308 murD UDP-N-acetylmura 93.4 0.38 9.6E-06 27.2 6.7 36 1-41 1-37 (445) 232 PRK06924 short chain dehydroge 93.3 0.37 9.4E-06 27.2 6.5 44 193-239 135-183 (251) 233 TIGR03590 PseG pseudaminic aci 93.0 0.73 1.9E-05 25.3 11.0 225 7-285 2-257 (280) 234 PRK06718 precorrin-2 dehydroge 93.0 0.74 1.9E-05 25.3 9.6 158 1-182 6-180 (202) 235 PRK07023 short chain dehydroge 92.9 0.52 1.3E-05 26.3 6.8 20 220-239 13-32 (243) 236 COG1648 CysG Siroheme synthase 92.9 0.77 2E-05 25.2 11.0 157 2-182 9-183 (210) 237 PRK08219 short chain dehydroge 92.8 0.52 1.3E-05 26.3 6.6 78 191-285 2-85 (226) 238 TIGR02622 CDP_4_6_dhtase CDP-g 92.7 0.69 1.8E-05 25.5 7.2 34 190-239 2-35 (361) 239 PRK07453 protochlorophyllide o 92.7 0.44 1.1E-05 26.7 6.2 38 1-40 1-38 (322) 240 PRK00045 hemA glutamyl-tRNA re 92.7 0.46 1.2E-05 26.7 6.2 105 189-316 179-289 (429) 241 PRK07846 mycothione/glutathion 92.6 0.14 3.6E-06 30.0 3.5 77 162-243 106-202 (453) 242 PRK08978 acetolactate synthase 92.6 0.85 2.2E-05 24.9 16.9 153 172-353 355-520 (548) 243 PRK01747 mnmC 5-methylaminomet 92.5 0.73 1.9E-05 25.3 7.1 98 121-239 170-286 (660) 244 pfam00582 Usp Universal stress 92.2 0.95 2.4E-05 24.6 7.4 114 6-123 3-140 (140) 245 PRK07789 acetolactate synthase 92.1 0.96 2.5E-05 24.6 18.8 177 168-372 397-595 (612) 246 PRK06467 dihydrolipoamide dehy 92.1 0.2 5E-06 29.0 3.7 75 163-241 112-206 (472) 247 PRK06115 dihydrolipoamide dehy 92.1 0.29 7.3E-06 28.0 4.5 74 163-240 112-205 (466) 248 PRK07282 acetolactate synthase 92.0 0.99 2.5E-05 24.5 13.0 148 167-346 367-530 (566) 249 COG4221 Short-chain alcohol de 92.0 0.83 2.1E-05 25.0 6.8 73 209-282 8-93 (246) 250 PRK06416 dihydrolipoamide dehy 91.9 0.29 7.4E-06 27.9 4.4 74 163-241 111-204 (462) 251 PRK09987 dTDP-4-dehydrorhamnos 91.9 0.93 2.4E-05 24.7 7.0 17 216-232 8-24 (299) 252 pfam01488 Shikimate_DH Shikima 91.7 0.37 9.5E-06 27.2 4.8 76 189-287 9-92 (134) 253 pfam02882 THF_DHG_CYH_C Tetrah 91.6 0.99 2.5E-05 24.5 6.9 74 171-284 20-93 (159) 254 KOG4169 consensus 91.6 0.91 2.3E-05 24.7 6.7 79 189-283 2-96 (261) 255 PRK07069 short chain dehydroge 91.6 0.52 1.3E-05 26.3 5.4 99 217-319 8-128 (251) 256 pfam03446 NAD_binding_2 NAD bi 91.5 0.93 2.4E-05 24.6 6.7 22 217-238 9-30 (163) 257 PRK06370 mercuric reductase; V 91.5 0.22 5.6E-06 28.7 3.4 70 163-241 113-202 (459) 258 cd05212 NAD_bind_m-THF_DH_Cycl 91.4 1 2.5E-05 24.5 6.7 73 177-285 14-86 (140) 259 KOG0725 consensus 91.3 0.87 2.2E-05 24.9 6.3 35 189-239 5-39 (270) 260 pfam05368 NmrA NmrA-like famil 91.3 0.76 1.9E-05 25.2 6.0 30 8-41 2-31 (232) 261 PTZ00079 NADP-specific glutama 91.2 1.2 3E-05 24.0 7.1 54 185-255 245-299 (469) 262 pfam08659 KR KR domain. This e 91.2 0.68 1.7E-05 25.5 5.7 70 217-286 9-97 (181) 263 PRK03806 murD UDP-N-acetylmura 90.6 0.86 2.2E-05 24.9 5.7 70 2-91 3-75 (438) 264 PRK07525 sulfoacetaldehyde ace 90.5 1.4 3.5E-05 23.6 12.1 148 168-344 385-545 (589) 265 PRK12446 N-acetylglucosaminyl 90.5 0.37 9.3E-06 27.3 3.8 39 6-44 2-41 (352) 266 PRK00726 murG N-acetylglucosam 90.4 0.38 9.6E-06 27.2 3.8 38 6-43 2-40 (359) 267 COG1087 GalE UDP-glucose 4-epi 90.3 1.3 3.3E-05 23.8 6.4 30 10-40 3-32 (329) 268 TIGR01179 galE UDP-glucose 4-e 90.3 0.98 2.5E-05 24.5 5.8 231 10-272 2-287 (341) 269 PRK13940 glutamyl-tRNA reducta 90.2 0.95 2.4E-05 24.6 5.7 79 189-287 178-259 (414) 270 TIGR01777 yfcH conserved hypot 90.2 0.43 1.1E-05 26.8 4.0 110 216-331 6-126 (307) 271 COG0373 HemA Glutamyl-tRNA red 90.2 0.99 2.5E-05 24.5 5.8 99 164-287 155-255 (414) 272 TIGR02197 heptose_epim ADP-L-g 90.2 0.92 2.4E-05 24.7 5.6 114 189-314 184-313 (353) 273 PRK06953 short chain dehydroge 90.1 1.5 3.8E-05 23.3 7.0 14 23-36 16-29 (222) 274 pfam01073 3Beta_HSD 3-beta hyd 90.0 1.5 3.9E-05 23.2 6.8 19 21-39 10-30 (280) 275 COG1249 Lpd Pyruvate/2-oxoglut 89.6 1.3 3.3E-05 23.8 6.0 76 162-243 112-207 (454) 276 PRK02472 murD UDP-N-acetylmura 89.5 1.7 4.3E-05 23.0 6.8 75 3-91 7-82 (450) 277 COG0452 Dfp Phosphopantothenoy 89.4 0.53 1.4E-05 26.2 3.9 52 230-282 181-235 (392) 278 PRK02006 murD UDP-N-acetylmura 89.4 0.73 1.9E-05 25.4 4.6 75 2-91 4-79 (501) 279 TIGR01139 cysK cysteine syntha 89.3 0.61 1.6E-05 25.8 4.2 112 82-241 58-175 (312) 280 PRK05476 S-adenosyl-L-homocyst 89.3 1.7 4.4E-05 22.9 8.5 183 2-239 42-238 (427) 281 PRK07578 short chain dehydroge 89.3 1.7 4.4E-05 22.9 7.6 63 217-286 9-71 (199) 282 PRK06882 acetolactate synthase 89.3 1.7 4.4E-05 22.9 13.3 147 168-346 371-533 (574) 283 PRK05884 short chain dehydroge 89.2 0.73 1.9E-05 25.3 4.5 16 23-38 15-30 (223) 284 PRK06719 precorrin-2 dehydroge 89.2 0.69 1.8E-05 25.5 4.4 36 1-40 9-44 (157) 285 PRK00143 trmU tRNA (5-methylam 89.1 0.71 1.8E-05 25.4 4.4 33 3-39 2-35 (355) 286 TIGR01214 rmlD dTDP-4-dehydror 88.9 0.71 1.8E-05 25.4 4.3 66 216-282 7-72 (317) 287 COG3967 DltE Short-chain dehyd 88.8 1.5 3.8E-05 23.4 5.8 74 190-280 3-88 (245) 288 PRK07845 flavoprotein disulfid 88.5 0.29 7.3E-06 28.0 2.0 89 140-240 99-209 (467) 289 cd03785 GT1_MurG MurG is an N- 88.4 0.53 1.4E-05 26.2 3.3 37 7-43 1-38 (350) 290 PRK06965 acetolactate synthase 88.3 2 5.2E-05 22.5 10.7 159 165-351 384-555 (587) 291 COG2072 TrkA Predicted flavopr 88.2 0.42 1.1E-05 26.9 2.7 68 160-244 140-210 (443) 292 COG1091 RfbD dTDP-4-dehydrorha 88.2 1 2.7E-05 24.3 4.7 38 9-52 5-42 (281) 293 PRK05249 soluble pyridine nucl 87.9 1 2.6E-05 24.4 4.5 75 163-241 114-208 (465) 294 KOG1208 consensus 87.6 2.2 5.7E-05 22.2 7.6 21 219-239 46-66 (314) 295 PRK10637 cysG siroheme synthas 87.3 2.3 5.9E-05 22.1 9.7 134 1-158 8-155 (457) 296 TIGR03457 sulphoacet_xsc sulfo 87.2 2.3 6E-05 22.1 11.2 60 208-277 420-483 (579) 297 PRK06154 hypothetical protein; 87.2 2.4 6E-05 22.1 10.3 146 169-346 372-531 (556) 298 cd00950 DHDPS Dihydrodipicolin 87.0 2.4 6.2E-05 22.0 14.5 177 118-353 6-182 (284) 299 cd01080 NAD_bind_m-THF_DH_Cycl 86.9 2.4 6.2E-05 22.0 6.9 76 169-284 26-101 (168) 300 TIGR01963 PHB_DH 3-hydroxybuty 86.7 2.5 6.3E-05 21.9 7.0 69 131-202 187-256 (258) 301 PRK03170 dihydrodipicolinate s 86.6 2.5 6.5E-05 21.9 14.7 176 120-354 9-184 (292) 302 COG1090 Predicted nucleoside-d 86.5 0.83 2.1E-05 25.0 3.4 23 21-44 11-33 (297) 303 pfam03358 FMN_red NADPH-depend 86.5 2 5.1E-05 22.5 5.4 84 194-287 2-85 (147) 304 PRK07418 acetolactate synthase 86.5 2.6 6.5E-05 21.8 12.2 158 169-358 387-559 (615) 305 PRK12320 hypothetical protein; 86.1 2.7 6.8E-05 21.7 6.3 37 10-47 3-45 (699) 306 PRK08010 pyridine nucleotide-d 85.9 0.59 1.5E-05 25.9 2.4 74 163-241 96-190 (441) 307 cd03818 GT1_ExpC_like This fam 85.8 2.1 5.2E-05 22.4 5.1 32 10-42 3-34 (396) 308 PRK03369 murD UDP-N-acetylmura 85.7 0.89 2.3E-05 24.8 3.3 33 3-41 10-44 (487) 309 PRK10422 lipopolysaccharide co 85.4 2.9 7.4E-05 21.5 18.1 204 1-243 1-226 (352) 310 PRK13748 putative mercuric red 85.4 1.7 4.2E-05 23.0 4.5 75 163-241 208-302 (561) 311 PRK08527 acetolactate synthase 85.4 2.9 7.4E-05 21.5 14.7 158 167-354 364-535 (560) 312 cd03808 GT1_cap1E_like This fa 85.2 2 5.1E-05 22.5 4.9 35 7-42 1-37 (359) 313 PRK08655 prephenate dehydrogen 85.2 1 2.6E-05 24.5 3.3 78 9-105 5-85 (441) 314 cd03784 GT1_Gtf_like This fami 85.1 0.89 2.3E-05 24.8 3.0 41 7-47 2-43 (401) 315 KOG1014 consensus 85.1 2.4 6E-05 22.0 5.2 99 216-316 57-170 (312) 316 PRK00421 murC UDP-N-acetylmura 84.9 2 5.2E-05 22.5 4.8 72 2-92 5-78 (459) 317 TIGR03452 mycothione_red mycot 84.9 2 5.1E-05 22.5 4.7 74 162-243 110-203 (452) 318 PRK07168 bifunctional uroporph 84.8 3.1 7.9E-05 21.3 11.8 218 3-279 78-309 (474) 319 PRK06129 3-hydroxyacyl-CoA deh 84.7 1.3 3.4E-05 23.7 3.7 32 6-41 3-34 (308) 320 pfam03807 F420_oxidored NADP o 84.5 0.49 1.2E-05 26.5 1.5 26 216-241 6-31 (93) 321 pfam05221 AdoHcyase S-adenosyl 84.5 3.2 8.1E-05 21.2 11.6 182 2-239 40-240 (430) 322 PRK05976 dihydrolipoamide dehy 84.2 1.8 4.5E-05 22.8 4.2 73 163-240 114-206 (464) 323 PRK01710 murD UDP-N-acetylmura 83.7 3.4 8.7E-05 21.0 6.9 74 3-90 12-86 (458) 324 TIGR01983 UbiG ubiquinone bios 83.6 1.3 3.3E-05 23.8 3.3 39 164-208 224-262 (275) 325 COG0482 TrmU Predicted tRNA(5- 83.4 2.3 6E-05 22.1 4.6 36 4-42 2-37 (356) 326 cd03132 GATase1_catalase Type 83.3 3.3 8.5E-05 21.1 5.3 102 5-123 1-102 (142) 327 PRK07979 acetolactate synthase 83.2 3.6 9.2E-05 20.9 15.5 155 168-350 371-538 (574) 328 TIGR01136 cysKM cysteine synth 83.1 1.1 2.8E-05 24.2 2.8 56 82-154 61-118 (315) 329 cd05213 NAD_bind_Glutamyl_tRNA 83.1 3.6 9.2E-05 20.9 10.1 105 189-318 175-284 (311) 330 PRK10660 tilS tRNA(Ile)-lysidi 83.0 3.6 9.1E-05 20.9 5.4 39 1-39 9-49 (433) 331 COG1797 CobB Cobyrinic acid a, 82.7 2.3 5.8E-05 22.1 4.3 81 6-89 1-86 (451) 332 PRK07092 benzoylformate decarb 82.6 3.8 9.7E-05 20.7 7.9 11 230-240 261-271 (521) 333 pfam01210 NAD_Gly3P_dh_N NAD-d 82.5 3.7 9.3E-05 20.8 5.3 25 215-239 6-30 (159) 334 PRK06912 acoL dihydrolipoamide 82.2 3.2 8.1E-05 21.2 4.9 74 163-241 109-202 (458) 335 PRK13896 cobyrinic acid a,c-di 81.2 2.5 6.4E-05 21.9 4.0 55 6-62 2-58 (432) 336 PRK06292 dihydrolipoamide dehy 81.1 4.3 0.00011 20.4 5.3 52 189-240 128-200 (460) 337 pfam03054 tRNA_Me_trans tRNA m 81.1 2.3 5.8E-05 22.2 3.8 29 7-39 2-31 (354) 338 TIGR01289 LPOR light-dependent 81.0 4.3 0.00011 20.4 5.9 71 210-281 6-92 (321) 339 TIGR00420 trmU tRNA (5-methyla 81.0 2.6 6.7E-05 21.8 4.1 29 6-41 1-33 (394) 340 PRK09414 glutamate dehydrogena 80.5 4.5 0.00011 20.3 9.8 53 186-255 223-276 (446) 341 PRK06835 DNA replication prote 80.5 2 5E-05 22.6 3.3 73 212-287 189-267 (330) 342 PRK08268 3-hydroxybutyryl-CoA 80.0 2.6 6.7E-05 21.7 3.8 32 6-41 4-35 (503) 343 KOG1209 consensus 79.8 4.7 0.00012 20.1 5.4 18 21-38 21-38 (289) 344 TIGR01832 kduD 2-deoxy-D-gluco 79.8 3.7 9.4E-05 20.8 4.5 62 217-284 159-235 (249) 345 PRK06130 3-hydroxybutyryl-CoA 79.7 2.7 7E-05 21.6 3.8 37 1-41 1-37 (310) 346 PRK08306 dipicolinate synthase 79.5 2.2 5.7E-05 22.2 3.3 143 186-404 146-292 (296) 347 PRK05134 3-demethylubiquinone- 79.2 2.7 6.8E-05 21.7 3.6 31 189-239 46-77 (233) 348 PRK06327 dihydrolipoamide dehy 79.0 4.6 0.00012 20.2 4.8 52 189-240 143-214 (475) 349 TIGR00872 gnd_rel 6-phosphoglu 78.8 1.3 3.2E-05 23.8 1.9 131 23-183 15-152 (341) 350 COG1819 Glycosyl transferases, 78.6 5.1 0.00013 19.9 5.0 46 6-51 2-48 (406) 351 PRK09496 trkA potassium transp 78.6 2.3 5.8E-05 22.2 3.1 62 214-277 237-304 (455) 352 PRK08293 3-hydroxybutyryl-CoA 78.5 3.1 7.9E-05 21.3 3.8 33 5-41 3-35 (288) 353 PRK06035 3-hydroxyacyl-CoA deh 78.5 3.1 7.9E-05 21.3 3.8 32 6-41 4-35 (291) 354 PRK07530 3-hydroxybutyryl-CoA 78.3 3.1 7.9E-05 21.3 3.8 33 5-41 4-36 (292) 355 PRK10799 putative hydrolase-ox 78.3 5.2 0.00013 19.8 5.0 113 122-255 93-213 (247) 356 cd01075 NAD_bind_Leu_Phe_Val_D 78.2 5.3 0.00013 19.8 8.9 20 217-236 36-55 (200) 357 cd00401 AdoHcyase S-adenosyl-L 78.0 5.4 0.00014 19.8 12.2 183 2-239 33-232 (413) 358 PRK01390 murD UDP-N-acetylmura 78.0 4.7 0.00012 20.1 4.6 33 2-39 6-39 (457) 359 PRK07819 3-hydroxybutyryl-CoA 77.9 3.3 8.5E-05 21.1 3.8 33 6-42 3-35 (284) 360 PRK09117 consensus 77.9 3.4 8.7E-05 21.0 3.8 32 6-41 3-34 (282) 361 PRK08322 acetolactate synthase 77.8 5.4 0.00014 19.7 11.2 10 231-240 261-270 (547) 362 cd06451 AGAT_like Alanine-glyo 77.8 5.4 0.00014 19.7 5.4 20 382-402 336-355 (356) 363 PRK07660 consensus 77.7 3.3 8.4E-05 21.1 3.7 34 4-41 2-35 (283) 364 cd01998 tRNA_Me_trans tRNA met 77.5 3.2 8.1E-05 21.2 3.6 29 7-39 1-30 (349) 365 PRK05562 precorrin-2 dehydroge 77.3 5.3 0.00014 19.8 4.7 152 2-180 19-191 (222) 366 PRK04690 murD UDP-N-acetylmura 76.5 5.9 0.00015 19.5 6.2 72 2-90 5-78 (468) 367 PRK05808 3-hydroxybutyryl-CoA 76.0 4 0.0001 20.6 3.8 34 5-42 3-36 (282) 368 PRK00094 gpsA NAD(P)H-dependen 76.0 6.1 0.00016 19.4 4.9 32 7-42 3-34 (325) 369 TIGR03249 KdgD 5-dehydro-4-deo 75.7 6.2 0.00016 19.4 9.5 176 119-356 12-187 (296) 370 pfam07993 NAD_binding_4 Male s 75.7 6.2 0.00016 19.4 6.5 25 11-39 3-29 (245) 371 pfam02737 3HCDH_N 3-hydroxyacy 75.2 3.3 8.4E-05 21.1 3.2 26 215-240 5-30 (180) 372 TIGR01035 hemA glutamyl-tRNA r 75.2 6.4 0.00016 19.3 6.4 145 189-359 182-344 (436) 373 TIGR02536 eut_hyp ethanolamine 75.1 4.6 0.00012 20.2 3.9 101 79-181 58-176 (248) 374 TIGR01830 3oxo_ACP_reduc 3-oxo 74.9 6.5 0.00016 19.2 5.1 150 216-371 6-187 (238) 375 LOAD_USPA consensus 74.9 6.5 0.00017 19.2 6.2 33 6-38 1-34 (135) 376 PRK06116 glutathione reductase 74.8 6.5 0.00017 19.2 5.9 71 162-241 111-199 (450) 377 COG1908 FrhD Coenzyme F420-red 74.8 6.5 0.00017 19.2 6.2 87 198-285 18-111 (132) 378 TIGR02525 plasmid_TraJ plasmid 74.5 3.7 9.4E-05 20.8 3.3 41 160-215 155-195 (374) 379 COG0329 DapA Dihydrodipicolina 74.1 6.8 0.00017 19.1 13.6 182 118-357 10-191 (299) 380 cd00952 CHBPH_aldolase Trans-o 74.1 6.8 0.00017 19.1 14.0 156 130-344 26-182 (309) 381 PRK12831 putative oxidoreducta 74.1 6.8 0.00017 19.1 5.2 42 190-248 279-320 (464) 382 PRK06526 transposase; Provisio 73.9 4.2 0.00011 20.5 3.5 31 211-241 103-135 (254) 383 pfam00201 UDPGT UDP-glucoronos 73.8 6.9 0.00018 19.1 4.8 36 5-41 1-36 (501) 384 KOG1429 consensus 73.7 6.4 0.00016 19.3 4.3 33 3-38 25-57 (350) 385 pfam05025 RbsD_FucU RbsD / Fuc 73.4 7 0.00018 19.0 5.2 67 217-283 4-76 (137) 386 COG1004 Ugd Predicted UDP-gluc 73.2 7.1 0.00018 19.0 5.8 199 7-239 2-238 (414) 387 cd03814 GT1_like_2 This family 73.2 7.1 0.00018 19.0 5.0 36 7-43 1-42 (364) 388 PRK12409 D-amino acid dehydrog 72.6 4.1 0.00011 20.5 3.2 18 218-235 197-214 (410) 389 PRK05599 hypothetical protein; 72.3 7.5 0.00019 18.8 6.4 68 213-282 6-89 (246) 390 PRK00141 murD UDP-N-acetylmura 72.2 7.5 0.00019 18.8 4.7 70 3-90 16-85 (476) 391 PRK07251 pyridine nucleotide-d 72.1 3.4 8.8E-05 21.0 2.7 88 137-241 81-189 (438) 392 PRK11199 tyrA bifunctional cho 71.9 7.6 0.00019 18.8 5.7 138 191-356 97-242 (374) 393 PRK10792 bifunctional 5,10-met 71.8 7.7 0.0002 18.8 6.1 74 171-284 143-216 (288) 394 PRK09260 3-hydroxybutyryl-CoA 71.7 5.8 0.00015 19.6 3.7 32 6-41 3-34 (289) 395 PRK05370 argininosuccinate syn 71.6 7.7 0.0002 18.7 4.8 38 4-44 10-47 (447) 396 COG0499 SAM1 S-adenosylhomocys 71.4 7.8 0.0002 18.7 11.3 182 2-239 42-239 (420) 397 COG3660 Predicted nucleoside-d 71.4 7.8 0.0002 18.7 8.7 115 20-156 16-137 (329) 398 PRK07066 3-hydroxybutyryl-CoA 71.3 6 0.00015 19.5 3.7 31 6-40 8-38 (321) 399 PRK12769 putative oxidoreducta 71.1 7.9 0.0002 18.7 4.6 22 217-238 335-356 (654) 400 pfam01121 CoaE Dephospho-CoA k 71.1 2.9 7.4E-05 21.5 2.1 27 8-35 1-27 (179) 401 COG0569 TrkA K+ transport syst 71.0 4.5 0.00011 20.3 3.0 178 6-240 1-182 (225) 402 cd01134 V_A-ATPase_A V/A-type 70.9 5.7 0.00015 19.6 3.6 27 216-242 237-263 (369) 403 cd03802 GT1_AviGT4_like This f 70.6 8.1 0.00021 18.6 5.0 35 7-42 2-46 (335) 404 PRK07710 acetolactate synthase 70.6 8.2 0.00021 18.6 13.2 157 169-357 375-547 (571) 405 COG0289 DapB Dihydrodipicolina 70.4 8.2 0.00021 18.6 4.3 14 134-147 81-94 (266) 406 TIGR03301 PhnW-AepZ 2-aminoeth 70.4 8.2 0.00021 18.6 6.3 80 164-253 106-198 (355) 407 cd00293 USP_Like Usp: Universa 70.4 8.2 0.00021 18.6 4.9 18 7-24 1-18 (130) 408 TIGR03394 indol_phenyl_DC indo 70.3 8.2 0.00021 18.6 11.3 24 5-32 14-37 (535) 409 TIGR01578 MiaB-like-B MiaB-lik 70.2 8.3 0.00021 18.5 5.0 187 134-361 132-340 (487) 410 PRK09754 phenylpropionate diox 70.0 6.2 0.00016 19.3 3.6 33 191-240 143-175 (400) 411 cd00951 KDGDH 5-dehydro-4-deox 69.8 8.5 0.00022 18.5 9.2 176 120-357 8-183 (289) 412 COG4081 Uncharacterized protei 69.5 8.4 0.00021 18.5 4.2 27 21-47 21-47 (148) 413 cd03791 GT1_Glycogen_synthase_ 69.4 7.6 0.00019 18.8 3.9 27 13-40 15-41 (476) 414 TIGR02415 23BDH acetoin reduct 69.2 7.9 0.0002 18.7 4.0 69 125-200 186-254 (258) 415 pfam03033 Glyco_transf_28 Glyc 69.2 3.8 9.7E-05 20.7 2.4 31 195-237 1-31 (136) 416 PRK01077 cobyrinic acid a,c-di 69.2 8.7 0.00022 18.4 4.4 84 5-90 3-90 (451) 417 COG5157 CDC73 RNA polymerase I 69.2 4.4 0.00011 20.3 2.7 79 114-213 202-284 (362) 418 COG0031 CysK Cysteine synthase 68.8 7.7 0.0002 18.7 3.9 132 83-240 62-202 (300) 419 PRK04965 nitric oxide reductas 68.7 6.4 0.00016 19.3 3.4 33 191-240 140-172 (378) 420 COG3980 spsG Spore coat polysa 68.6 9 0.00023 18.3 14.6 241 7-310 2-258 (318) 421 PRK05038 consensus 68.5 9 0.00023 18.3 6.0 19 216-234 224-242 (315) 422 PRK13943 protein-L-isoaspartat 68.5 9 0.00023 18.3 4.8 93 227-346 119-225 (317) 423 cd03821 GT1_Bme6_like This fam 68.3 9.1 0.00023 18.3 4.9 35 7-42 1-41 (375) 424 PRK07818 dihydrolipoamide dehy 68.3 4 0.0001 20.6 2.3 74 163-240 111-203 (467) 425 pfam00070 Pyr_redox Pyridine n 68.1 5.7 0.00015 19.6 3.1 28 216-243 6-33 (82) 426 cd04962 GT1_like_5 This family 67.9 9.3 0.00024 18.2 5.1 34 7-42 2-39 (371) 427 PRK05752 uroporphyrinogen-III 67.7 9.3 0.00024 18.2 7.3 158 3-241 1-162 (255) 428 TIGR03449 mycothiol_MshA UDP-N 67.7 8 0.0002 18.7 3.7 32 8-40 14-45 (405) 429 COG0771 MurD UDP-N-acetylmuram 67.7 5.7 0.00014 19.6 3.0 192 3-239 5-219 (448) 430 PRK00081 coaE dephospho-CoA ki 67.6 4.7 0.00012 20.1 2.6 28 8-36 3-30 (199) 431 CHL00099 ilvB acetohydroxyacid 67.6 9.4 0.00024 18.2 11.4 162 167-358 377-551 (588) 432 pfam00701 DHDPS Dihydrodipicol 67.3 9.5 0.00024 18.2 10.0 179 118-355 7-185 (289) 433 KOG1221 consensus 67.0 9.7 0.00025 18.1 4.8 102 3-108 10-133 (467) 434 TIGR03026 NDP-sugDHase nucleot 66.5 9.9 0.00025 18.1 6.6 36 322-357 314-355 (411) 435 PRK00654 glgA glycogen synthas 66.4 9.4 0.00024 18.2 3.9 27 13-40 16-42 (476) 436 pfam01266 DAO FAD dependent ox 66.1 7 0.00018 19.0 3.2 53 218-280 147-200 (309) 437 PRK10307 predicted glycosyl tr 66.0 10 0.00026 18.0 5.1 33 7-40 2-40 (415) 438 PRK00711 D-amino acid dehydrog 65.8 6.9 0.00018 19.1 3.1 68 200-280 188-255 (416) 439 TIGR02788 VirB11 P-type DNA tr 65.7 1.7 4.4E-05 23.0 0.0 145 101-269 61-234 (328) 440 PRK05225 ketol-acid reductoiso 65.3 10 0.00026 17.9 4.7 69 3-88 35-105 (489) 441 PTZ00052 thioredoxin reductase 65.2 4.7 0.00012 20.1 2.2 76 163-240 158-253 (541) 442 cd03800 GT1_Sucrose_synthase T 65.2 9.5 0.00024 18.2 3.7 26 13-39 20-45 (398) 443 PRK11730 fadB multifunctional 64.9 9.1 0.00023 18.3 3.6 37 204-240 308-344 (715) 444 cd03817 GT1_UGDG_like This fam 64.7 11 0.00027 17.8 4.8 28 14-42 14-41 (374) 445 cd01988 Na_H_Antiporter_C The 64.7 11 0.00027 17.8 5.4 29 7-35 1-30 (132) 446 PRK11761 cysM cysteine synthas 64.6 6.8 0.00017 19.1 2.9 50 84-150 64-113 (296) 447 TIGR02853 spore_dpaA dipicolin 64.5 5.6 0.00014 19.7 2.4 102 217-356 160-264 (288) 448 PRK05439 pantothenate kinase; 64.5 7.1 0.00018 19.0 3.0 26 215-240 95-124 (312) 449 PRK01184 hypothetical protein; 64.5 6 0.00015 19.4 2.6 27 9-36 3-29 (183) 450 PTZ00300 pyruvate kinase; Prov 64.3 11 0.00028 17.8 10.9 71 301-374 372-451 (454) 451 TIGR01426 MGT glycosyltransfer 64.2 5 0.00013 20.0 2.1 23 21-43 12-34 (429) 452 PRK06975 bifunctional uroporph 64.1 11 0.00028 17.8 6.9 35 189-240 136-170 (653) 453 PRK06354 pyruvate kinase; Prov 64.1 11 0.00028 17.8 9.4 18 116-133 276-293 (589) 454 cd06192 DHOD_e_trans_like FAD/ 63.9 11 0.00028 17.7 7.0 37 192-243 97-134 (243) 455 PRK00805 putative deoxyhypusin 63.7 11 0.00028 17.7 5.9 54 4-61 52-105 (338) 456 pfam01175 Urocanase Urocanase. 63.5 8.9 0.00023 18.4 3.3 136 111-262 70-277 (545) 457 PRK02705 murD UDP-N-acetylmura 63.5 7.3 0.00019 18.9 2.9 63 24-90 15-77 (459) 458 PRK05414 urocanate hydratase; 63.4 8.8 0.00022 18.4 3.3 122 111-248 81-271 (558) 459 PRK09183 transposase/IS protei 63.3 11 0.00027 17.8 3.7 33 209-241 104-138 (258) 460 pfam03853 YjeF_N YjeF-related 63.2 11 0.00029 17.7 6.4 38 190-240 26-63 (170) 461 TIGR02279 PaaC-3OHAcCoADH 3-hy 63.1 4.7 0.00012 20.1 1.9 23 82-104 112-134 (508) 462 PRK03971 putative deoxyhypusin 62.8 10 0.00026 17.9 3.6 38 6-44 67-104 (334) 463 cd03794 GT1_wbuB_like This fam 62.7 12 0.0003 17.6 4.8 27 14-41 14-40 (394) 464 PRK04527 argininosuccinate syn 62.5 12 0.0003 17.6 4.7 38 3-43 1-38 (397) 465 PRK06019 phosphoribosylaminoim 62.3 12 0.0003 17.6 4.8 148 3-179 5-171 (377) 466 PRK03333 coaE dephospho-CoA ki 62.2 7.5 0.00019 18.8 2.8 38 8-48 2-40 (394) 467 COG2945 Predicted hydrolase of 62.1 12 0.0003 17.5 4.1 79 100-179 10-96 (210) 468 PRK00054 dihydroorotate dehydr 61.9 12 0.00031 17.5 6.1 37 192-243 100-137 (248) 469 COG1157 FliI Flagellar biosynt 61.9 12 0.00031 17.5 4.0 137 85-241 95-261 (441) 470 PRK13479 2-aminoethylphosphona 61.8 12 0.00031 17.5 11.4 32 139-179 96-127 (368) 471 PRK00048 dihydrodipicolinate r 61.5 12 0.00031 17.5 5.2 16 134-149 81-96 (265) 472 TIGR03649 ergot_EASG ergot alk 61.4 12 0.00031 17.5 3.8 31 9-43 4-34 (285) 473 TIGR01584 citF citrate lyase, 61.3 12 0.0003 17.5 3.7 130 192-354 130-285 (496) 474 pfam06258 DUF1022 Protein of u 61.3 12 0.00031 17.5 11.2 128 190-349 141-273 (308) 475 TIGR01043 ATP_syn_A_arch ATP s 61.2 5.4 0.00014 19.8 1.9 225 131-400 237-502 (584) 476 PRK07591 threonine synthase; V 61.1 12 0.00032 17.4 4.1 50 85-151 141-190 (422) 477 PRK03620 5-dehydro-4-deoxygluc 60.9 12 0.00032 17.4 14.7 174 121-356 10-183 (296) 478 PRK07531 bifunctional 3-hydrox 60.8 12 0.0003 17.5 3.6 38 6-47 3-41 (489) 479 cd04955 GT1_like_6 This family 60.8 13 0.00032 17.4 4.8 34 7-41 1-41 (363) 480 pfam08323 Glyco_transf_5 Starc 60.6 13 0.00032 17.4 3.9 31 11-42 12-42 (229) 481 pfam05179 CDC73 RNA pol II acc 60.5 7.2 0.00018 19.0 2.4 38 115-157 115-152 (273) 482 TIGR01138 cysM cysteine syntha 60.2 8.7 0.00022 18.4 2.8 55 85-156 64-120 (300) 483 TIGR02685 pter_reduc_Leis pter 60.1 13 0.00033 17.3 5.4 67 219-287 12-112 (283) 484 PRK09564 coenzyme A disulfide 60.1 13 0.00033 17.3 4.6 34 191-241 148-181 (443) 485 pfam10727 Rossmann-like Rossma 60.1 12 0.00032 17.4 3.6 27 216-242 4-30 (111) 486 PRK08192 aspartate carbamoyltr 60.1 13 0.00033 17.3 7.3 58 1-60 1-74 (338) 487 PRK07667 uridine kinase; Provi 60.0 13 0.00032 17.4 3.6 39 4-42 11-52 (190) 488 TIGR03364 HpnW_proposed FAD de 59.9 10 0.00026 17.9 3.1 27 10-39 4-30 (365) 489 PRK11797 D-ribose pyranase; Pr 59.8 13 0.00033 17.3 3.6 58 217-274 4-67 (138) 490 pfam01916 DS Deoxyhypusine syn 59.6 13 0.00033 17.3 4.2 49 5-56 37-85 (297) 491 PRK05480 uridine kinase; Provi 59.4 13 0.00034 17.2 6.3 26 4-30 3-28 (209) 492 PRK11559 garR tartronate semia 59.2 9.8 0.00025 18.1 2.9 120 7-156 3-124 (295) 493 cd02022 DPCK Dephospho-coenzym 59.1 6.2 0.00016 19.4 1.9 26 9-35 1-26 (179) 494 PRK09954 hypothetical protein; 59.0 13 0.00034 17.2 6.4 28 213-240 88-115 (362) 495 PRK07952 DNA replication prote 59.0 13 0.00034 17.2 3.9 34 208-241 98-133 (242) 496 pfam00205 TPP_enzyme_M Thiamin 58.5 11 0.00027 17.8 3.0 11 81-91 77-87 (138) 497 COG0143 MetG Methionyl-tRNA sy 58.5 12 0.0003 17.6 3.2 24 14-37 23-47 (558) 498 PRK01259 ribose-phosphate pyro 58.3 14 0.00035 17.1 7.1 19 216-234 219-237 (309) 499 PRK01221 putative deoxyhypusin 58.3 14 0.00035 17.1 5.7 53 5-61 54-106 (312) 500 COG0621 MiaB 2-methylthioadeni 57.9 14 0.00036 17.1 6.3 155 164-352 168-329 (437) No 1 >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional Probab=100.00 E-value=0 Score=992.06 Aligned_cols=402 Identities=50% Similarity=0.800 Sum_probs=383.9 Q ss_pred CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 98885569999528478999999999999879889998585686306989999974797582076788778774300114 Q gi|254780622|r 1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLAN 80 (405) Q Consensus 1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~ 80 (405) |.|+||||||||||||||||+++|+|+|+++|++|+||||++|++||+|++|+++|+|+||+|+|+...+.+++||+|++ T Consensus 67 ~~l~GKkIlLgVtGsIAAYKa~~LvR~L~k~Ga~V~vvmT~~A~~FVtplt~~~ls~~~V~tdl~~~~~~~~~~HI~La~ 146 (476) T PRK13982 67 ASLGSKRITLIIGGGIAAYKALDLIRRLKERGAEVRCVLTKAAQQFVTPLTASALSGQRVYTDLFDPESEFDAGHIRLAR 146 (476) T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHH T ss_conf 68889979999674899999999999999789989999787786341899999983997770267876567776514414 Q ss_pred CCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC Q ss_conf 46557884111888988520245521466675227996898405660000038899999998640001346521255310 Q gi|254780622|r 81 ECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAES 160 (405) Q Consensus 81 ~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c 160 (405) |+|++||||||||||+|+|+||||||+|+++|++ ++|+++|||||++||+||+||+|+++|+++|++|++|..|.||+| T Consensus 147 ~ADlilVAPATAN~IaK~A~GiADdllst~~LA~-~~pvliaPAMN~~Mw~npatq~Ni~~L~~~G~~ii~P~~G~lA~c 225 (476) T PRK13982 147 DCDLIVVAPATADLMAKMANGLADDLASAILLAA-NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNAGEMAER 225 (476) T ss_pred HCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHC-CCCEEEEECCCHHHHHCHHHHHHHHHHHCCCCEECCCCCCCHHCC T ss_conf 4499998238999999997566556999999865-997799958299988699999999998614988458866601204 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 32233343455899999998631013200179778984042010102135762157727889999999825883899841 Q gi|254780622|r 161 NGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 161 ~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) |++|.|||+||++|+.++.+++....+.+|+|||||||+|||+|||||||||||+||||||++||++|+.+||+||||+| T Consensus 226 ge~G~GRl~ep~~Iv~~i~~~l~~~~~~~L~GkkVLITAGpT~E~IDPVR~IsN~SSGKmG~aiA~aa~~rGA~VtLIsG 305 (476) T PRK13982 226 GEAGVGRMAEPLEIAAAAEALLRPPQPKPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISG 305 (476) T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC T ss_conf 66577889999999999999872145555679889996688712226745577668519999999999967997999956 Q ss_pred CCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCC Q ss_conf 56677656746754657789999998505888799740444443222210112334557751045521806898876214 Q gi|254780622|r 241 PVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQ 320 (405) Q Consensus 241 ~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k 320 (405) |++++.|+++++++|+|++||++++++.+++|++||+||||||+|++.+++||||++. +.++|+|++|||||+++++++ T Consensus 306 p~~l~~P~gv~~i~V~tA~eM~~av~~~~~~Di~I~aAAVsDyrp~~~~~~KiKK~~~-~~~~L~L~~npDIL~~i~~~~ 384 (476) T PRK13982 306 PVDLRDPQGVKVIHVESAREMLAAVEAALPADIAIFAAAVADWRVANEGGQKLKKGAA-GPPPLQLVENPDILATISKLA 384 (476) T ss_pred CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHCCCCCCEECCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHH T ss_conf 6777789984699887999999999733132633532221455205654346145778-766357767953999998742 Q ss_pred -CCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCE----EECCCCCHHHHHHHHH Q ss_conf -89958999811412389999999997499899992057767777766118999836985----9727899899999999 Q gi|254780622|r 321 -CRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKI----EEYPELPKAEVADRLC 395 (405) Q Consensus 321 -~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~----~~~~~~sK~~iA~~Il 395 (405) .+++++|||+|||++++++|++||++|||||||||+|++...+||+|+|+++|++++|. ++||.++|.++|++|+ T Consensus 385 ~~~~~~~VGFAAETe~li~~A~~KL~~K~~D~IvaNdv~~~~~gFgsD~N~V~ii~kdg~~~~ie~~P~~sK~evA~~Il 464 (476) T PRK13982 385 ENRPPLVIGFAAETEHLIDNARAKLARKGCDWIVANDVSPATGVMGGDRNTVHLLTRDGDAVDVESWPVMTKDEVATALV 464 (476) T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCHHHHHHHHH T ss_conf 57998899980386837999999999729899998078888997588852899996899712220066899999999999 Q ss_pred HHHHHHHCC Q ss_conf 999998517 Q gi|254780622|r 396 HLIVEHLGM 404 (405) Q Consensus 396 ~~i~~~L~~ 404 (405) ++|.+.|.. T Consensus 465 d~I~~~~s~ 473 (476) T PRK13982 465 ARIASTFTV 473 (476) T ss_pred HHHHHHHCC T ss_conf 999997276 No 2 >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated Probab=100.00 E-value=0 Score=968.20 Aligned_cols=390 Identities=46% Similarity=0.695 Sum_probs=375.4 Q ss_pred CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 88556999952847899999999999987988999858568630698999997479758207678877877430011446 Q gi|254780622|r 3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANEC 82 (405) Q Consensus 3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~a 82 (405) |+||||+|||||||||||+++|+|+|+|+|++|+|+||++|++||+|++|+++|+++|++|.|+.....+++||+|++|| T Consensus 2 L~gK~IllgVtGsIAayK~~~L~r~L~k~G~~V~vvmT~~A~~fi~plt~~~ls~~~V~td~~~~~~~~~~~HI~la~~a 81 (392) T PRK05579 2 LAGKRIVLGVSGGIAAYKALELVRRLRKAGADVRVVMTEAALKFVTPLTFQALSGNPVYTDLWDPAAEAAMGHIELAKWA 81 (392) T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHC T ss_conf 99998999983379999999999999878998999988537542799899998099886277787666775463441315 Q ss_pred CEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC Q ss_conf 55788411188898852024552146667522799689840566000003889999999864000134652125531032 Q gi|254780622|r 83 DLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNG 162 (405) Q Consensus 83 D~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~ 162 (405) |+++|||||||||||+|+|||||++|++++|+ ++|+++|||||++||+||+||+|+++|+++|+.|++|+.|.|| ||+ T Consensus 82 D~~liAPATAN~iaK~A~GiaDdllt~~~la~-~~pv~iaPAMn~~M~~np~tq~Ni~~L~~~G~~vi~P~~G~LA-cgd 159 (392) T PRK05579 82 DLVLIAPATADLIAKLAHGIADDLLTTTLLAT-DAPVLVAPAMNTQMWENPATQRNLATLRSRGVLVIGPASGRLA-CGD 159 (392) T ss_pred CEEEECCCCHHHHHHHHCCCCCHHHHHHHHHC-CCCEEEEECCCHHHHHCHHHHHHHHHHHHCCCEEECCCCCCCC-CCC T ss_conf 76898323378999987577437888888853-9957998376988886979999999997369888189667524-633 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC Q ss_conf 23334345589999999863101320017977898404201010213576215772788999999982588389984156 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV 242 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~ 242 (405) +|+||||||++|+.++++.+.. ++|+|||||||+|||+|+|||||||||+||||||++||++|+++||+|+||+||+ T Consensus 160 ~G~Grl~ep~~I~~~i~~~l~~---~~l~gkkvLITaG~T~E~IDpVR~IsN~SSGkmG~aiA~~a~~~GA~VtlI~g~~ 236 (392) T PRK05579 160 VGKGRMAEPEEIVAAAERLLGP---KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPV 236 (392) T ss_pred CCCCCCCCHHHHHHHHHHHCCC---CCCCCCEEEEECCCCEEEECCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCC T ss_conf 2356899999999999985067---7767887999747724776762476657865899999999996799799996478 Q ss_pred CCCCCCCEEEEEHHHHHHHHHHHHHCCC-CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCC Q ss_conf 6776567467546577899999985058-887997404444432222101123345577510455218068988762148 Q gi|254780622|r 243 SIADPPNVMTIHVERAEDMLQEVLKALP-VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQC 321 (405) Q Consensus 243 ~~~~~~~~~~i~v~t~~em~~~~~~~~~-~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~ 321 (405) ++..|+++++++|+|++||++++++.++ +|++||+||||||+|.+++++|+||++.++.++|+|++|||||+++++ ++ T Consensus 237 ~~~~p~~v~~i~v~ta~eM~~~v~~~~~~~D~~I~aAAVsDf~p~~~~~~Kikk~~~~~~~~l~L~~npDIL~~i~~-~~ 315 (392) T PRK05579 237 NLPTPAGVKRIDVESAQEMLDAVLAAAQKADIFIMAAAVADYRPATVAEQKIKKTEDGDELTLELVPNPDILAEVAA-LK 315 (392) T ss_pred CCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHC-CC T ss_conf 77899996799967599999999973544789999301100011454565547677888865787528289999861-28 Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHH Q ss_conf 995899981141238999999999749989999205776777776611899983698597278998999999999999 Q gi|254780622|r 322 RPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVADRLCHLIV 399 (405) Q Consensus 322 ~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA~~Il~~i~ 399 (405) |++++|||||||++++++|++||++|+||+||||++++ ..+||+|+|+++|+++++.++++.++|.++|++|+|+|. T Consensus 316 ~~~~~VGFaaEt~~l~~~A~~Kl~~K~~D~IvaN~v~~-~~gFgsd~N~v~ii~~~g~~~~~~~sK~~iA~~Ild~Ia 392 (392) T PRK05579 316 DNQPLVGFAAETGNVLEYARAKLKRKGLDLIVANDVSA-GGGFGSDENAVTLLWKDGEKELPLASKLELARRLLDEIA 392 (392) T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCC-CCCCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHHC T ss_conf 99759999637771899999999975989999935899-988787863999997999188588999999999999859 No 3 >COG0452 Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism] Probab=100.00 E-value=0 Score=738.24 Aligned_cols=390 Identities=45% Similarity=0.653 Sum_probs=367.6 Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 88855699995284789999999999998798899985856863069899999747975820767887787743001144 Q gi|254780622|r 2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANE 81 (405) Q Consensus 2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~ 81 (405) .|+||+|+|||||||||||+++++|.|++.|++|+|+||++|++||+|++|+++++|+|++ .+++.....++||+|++| T Consensus 1 ~l~~k~ill~v~gsiaayk~~~l~r~L~~~ga~v~vvmt~~a~~fv~p~~~~~~s~~~v~t-~~~~~~~~~~~HI~l~~~ 79 (392) T COG0452 1 LLEGKRILLGVTGSIAAYKSVELVRLLRRSGAEVRVVMTESARKFITPLTFQALSGNPVYT-LLDEELTGSVEHIELARW 79 (392) T ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCHHHHHCCCCCC-CCCCCCCCCCCHHHHHHH T ss_conf 9877638999417333446789999876279736897065564223740488760897311-255566566427765320 Q ss_pred CCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC Q ss_conf 65578841118889885202455214666752279968984056600000388999999986400013465212553103 Q gi|254780622|r 82 CDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESN 161 (405) Q Consensus 82 aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~ 161 (405) +|+++|+|||+|||+|+|+|++||++|+++++. ..|++++||||+.||+||++|+|+++|+.+|+.+|+|+.|.++ T Consensus 80 adl~lvaPaTan~i~Kla~g~aD~~~t~~~~a~-~~p~~~aPamn~~M~~~~~tq~n~~~l~~~g~~~I~p~~~~~a--- 155 (392) T COG0452 80 ADLLLVAPATANTIAKLAVGIADNLSTTTLLAA-KAPLVLAPAMNVIMYTHPATQENLQRLKSEGVLFIEPIEGELA--- 155 (392) T ss_pred CCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHH-CCCEEECCCCCHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCC--- T ss_conf 688996799711688876412043887799874-5836871464657643776776999886569589765533200--- Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 22333434558999999986310132001797789840420101021357621577278899999998258838998415 Q gi|254780622|r 162 GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP 241 (405) Q Consensus 162 ~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~ 241 (405) +.|.|||+||++|+..+.+.+... +|+|++||||+|||+|+|||||||||+||||||++||++++++||+|++|+|| T Consensus 156 ~~g~g~~~e~~~Iv~~~~~~~~~~---~l~gk~Vlit~G~t~E~idpvr~itn~ssGk~g~alA~a~~~~GA~V~lv~g~ 232 (392) T COG0452 156 DVGDGRLAEPEEIVEAALALLKTP---DLKGKKVLITAGPTREYIDPVRFISNRSSGKMGFALAAAAKRRGASVTLVSGP 232 (392) T ss_pred CCCCCCCCCHHHHHHHHHHCCCCC---CCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCC T ss_conf 123334689899999987314651---22697798747986657662012124445545689999999769825881487 Q ss_pred CCCCCCCCEEEEEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCC Q ss_conf 6677656746754657789999998505-888799740444443222210112334557751045521806898876214 Q gi|254780622|r 242 VSIADPPNVMTIHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQ 320 (405) Q Consensus 242 ~~~~~~~~~~~i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k 320 (405) +++..|+++..++|.|++||++++.+.. ++|++|++|||+||+|+..+++|+|| ..+.+.|+|.+|||||.++++.+ T Consensus 233 ~~~~~p~~v~~v~v~sa~em~~~v~~~~~~~d~~i~~aAvaD~~~~~~~~~Kikk--~~~~~~l~l~~n~dil~~~~~~~ 310 (392) T COG0452 233 TSLKIPAGVEVVKVESAEEMLNAVLEAALPADIFISAAAVADYRPKWVAEAKIKK--QGEPFKLELVPNPDILASVARDY 310 (392) T ss_pred CCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCCCCCEEC--CCCCEEEEECCCCHHHHHHHHHC T ss_conf 7677876442021000999999997414431000121023103346444230213--78833799457803999998643 Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCE-EECCCCCHHHHHHHHHHHHH Q ss_conf 89958999811412389999999997499899992057767777766118999836985-97278998999999999999 Q gi|254780622|r 321 CRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKI-EEYPELPKAEVADRLCHLIV 399 (405) Q Consensus 321 ~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~-~~~~~~sK~~iA~~Il~~i~ 399 (405) ...+++|||+|||++++++|++|+.+|++|+++||+++.. +||+|+|+++++++++. .+++.++|.++|++|++++. T Consensus 311 ~~~~~~Vgfaaet~~~~~~a~~kl~~k~~D~i~aNd~~~~--~fg~d~n~~~~~~~d~~~~~~~~~~k~~~a~~i~~~i~ 388 (392) T COG0452 311 PKKNILVGFAAETGDIVEYAREKLERKNLDLIVANDVSEI--GFGSDDNEVRIIDKDGEDVELPEMSKEELAERILDEIA 388 (392) T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCC--CCCCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHHH T ss_conf 5776389983570778899999865417876885344456--77865321054215997512455477889999999998 Q ss_pred HHHC Q ss_conf 9851 Q gi|254780622|r 400 EHLG 403 (405) Q Consensus 400 ~~L~ 403 (405) +.+. T Consensus 389 ~~~~ 392 (392) T COG0452 389 ELLE 392 (392) T ss_pred HHHC T ss_conf 8519 No 4 >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; InterPro: IPR005252 This entry represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, (6.3.2.5 from EC), and decarboxylation, (4.1.1.36 from EC)) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. The amino-terminal region is responsible for the phosphopantothenoylcysteine decarboxylase activity . In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein [. It has been suggested that this bifunctional protein should be renamed coaBC .. Probab=100.00 E-value=0 Score=687.98 Aligned_cols=395 Identities=41% Similarity=0.612 Sum_probs=376.9 Q ss_pred CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCC Q ss_conf 8855699995284789999999999998798899985856863069899999747975--82076788778774300114 Q gi|254780622|r 3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRV--YTHLLSYKEGYESNHIQLAN 80 (405) Q Consensus 3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v--~~~~~~~~~~~~~~Hi~l~~ 80 (405) |+||+|++|||||||+||+++++|+|.++|++|+|+||++|++||+|++|+++++|++ +++.|+..++..+.||+++. T Consensus 1 l~~k~~~~~~~g~ia~~~~~~l~~~l~~~ga~v~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~ 80 (418) T TIGR00521 1 LENKKILLGVTGGIAAYKTVELVRELVKAGAEVKVIMTEAAKKFITPLTLEALSGHKVLGVTELWGPIEHNALGHIDLAK 80 (418) T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC T ss_conf 99865899843641456789999999856971699863223534122333332066432310000102344444443216 Q ss_pred CCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCC-CCCEEEECCCCCHHHHHHHHHHHHHHHHHH-CCCCCCCCHHHHH Q ss_conf 46557884111888988520245521466675227-996898405660000038899999998640-0013465212553 Q gi|254780622|r 81 ECDLLVVAPASANFIAHVAHGMVYDLASAILLAKG-DQPVLIAPAMNFMMWAKPATQRNVEILQKD-GCYFIGPESGAMA 158 (405) Q Consensus 81 ~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~-~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~-g~~vi~P~~g~la 158 (405) |+|+++++|||+|+++|+++|++||+++++++++. ++|++++||||++||++|++++|+.+|+.. |+.+++|..|.++ T Consensus 81 ~ad~~~~~P~t~~~~~k~~~g~ad~~~~~~~l~~~g~~P~~~~p~~~~~~~~~~~~~~n~~~l~~~~~~~~~~p~~g~~a 160 (418) T TIGR00521 81 WADLILIAPATANTISKLAHGIADDLLSTTLLAASGGAPIILAPAMNENMYNNPAVQENLKRLKDDDGYIFIEPDSGLLA 160 (418) T ss_pred CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEE T ss_conf 87779982420236888753221135788887506998679851111444201678888988752388378747752110 Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 10322333434558999999986310132001797789840420101021357621577278899999998258838998 Q gi|254780622|r 159 ESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI 238 (405) Q Consensus 159 ~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li 238 (405) |+++|+||+++|++|+..+.+.+......+++|++|+||+|||+|+|||||||+|+||||||++||++++++||+|++| T Consensus 161 -c~~~g~g~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~g~t~e~~dp~r~~~n~s~G~~g~~~a~~~~~~Ga~v~~~ 239 (418) T TIGR00521 161 -CGDEGKGRLAEPETIVKAAERELSPKGSADLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLI 239 (418) T ss_pred -CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCEEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCEEEE T ss_conf -0111555567988999999986235310322586489953876011133000045664347899999998659717998 Q ss_pred ECCCCCCCCC-CEEEEEHHHHHHHHHHHH-HCC-CCC------EEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC Q ss_conf 4156677656-746754657789999998-505-888------7997404444432222101123345577510455218 Q gi|254780622|r 239 SGPVSIADPP-NVMTIHVERAEDMLQEVL-KAL-PVD------IAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN 309 (405) Q Consensus 239 ~g~~~~~~~~-~~~~i~v~t~~em~~~~~-~~~-~~D------~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~ 309 (405) +||.+...|+ +++.++|.++.||.++++ +.. .+| ++|.+|||+||++....++|+|++ .++.+.++|.+| T Consensus 240 ~g~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~p~~~~~aa~~d~~~~~~~~~k~~~~-~~~~~~~~l~~~ 318 (418) T TIGR00521 240 AGPVSLPTPPGGVKSIKVLTAEEMLEAALNELAKDFDKHALKPIFIGAAAVADFKPKTVFEGKIKKS-QGEELSLKLKKN 318 (418) T ss_pred ECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCC-CCCCEEEEEECC T ss_conf 4477877675202344122089999999999873100000111321112220231210000022103-677405763057 Q ss_pred HHHHHHHHHCCCCCCEEEEEECCCCH----HHHHHHHHHH--HCC---CCEEEEECCCCCCCCCCCCCEEEEEECCCC-E Q ss_conf 06898876214899589998114123----8999999999--749---989999205776777776611899983698-5 Q gi|254780622|r 310 PDILKIIGHHQCRPSIVVGFAAETQC----IEQNAREKLL--NKG---ADFIVSNCILPDTGFVGKEWNKVSIVFPDK-I 379 (405) Q Consensus 310 pdIL~~i~~~k~~~~~lVGFkaET~~----l~~~A~~Kl~--~K~---~D~IVAN~i~~~~~~fgsd~n~v~li~~~~-~ 379 (405) |||+..+++.+.+++++|||+||+++ ++++|++|+. ++| +|+|+||+++....+||+|+|+++++++++ . T Consensus 319 p~~~~~~~~~~~~~~~~~Gf~ae~~~~~~~~~~~a~~~l~p~~~ng~dl~~~~an~~~~~~~gfg~~~n~~~~~~~~g~~ 398 (418) T TIGR00521 319 PDIIKEVGKIKKHEQVIVGFKAETNDDNDELIKYAKEKLKPFKKNGKDLDLIVANDVSQPGRGFGSDENEVYIFSKHGHE 398 (418) T ss_pred HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCE T ss_conf 15788765216766358887303688566888888985204440787101587414556766667543258998458752 Q ss_pred EECCCCCHHHHHHHHHHHHH Q ss_conf 97278998999999999999 Q gi|254780622|r 380 EEYPELPKAEVADRLCHLIV 399 (405) Q Consensus 380 ~~~~~~sK~~iA~~Il~~i~ 399 (405) .+++.++|.+++.+|++.+. T Consensus 399 ~~~~~~~k~~~~~~~~~~~~ 418 (418) T TIGR00521 399 KELPLMSKLELAERILDEIL 418 (418) T ss_pred EECCCHHHHHHHHHHHHHHC T ss_conf 32020116789999998719 No 5 >PRK07313 phosphopantothenoylcysteine decarboxylase; Validated Probab=100.00 E-value=0 Score=442.47 Aligned_cols=178 Identities=42% Similarity=0.617 Sum_probs=172.1 Q ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 85569999528478999999999999879889998585686306989999974797582076788778774300114465 Q gi|254780622|r 4 SGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECD 83 (405) Q Consensus 4 ~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD 83 (405) .+|||||||||||||||+++|+|+|+++|++|+||||++|++||+|++|+++++++||+|.++++.+..++||+|++|+| T Consensus 1 m~K~IllgvtGsIAayK~~~lir~L~k~g~~V~vi~T~~A~~fv~~~~~~~ls~~~v~~d~~~~~~~~~~~HI~L~~waD 80 (180) T PRK07313 1 MTKKILLAVSGSIAAYKAADLTSQLTKIGYDVTVIMTKAATQFITPLTLQVLSKNPVHLDVMDEEDPKSMNHIELAKNTD 80 (180) T ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCHHHHHHHCCCEEECCCCCCCCCCCCCCEEECCCCC T ss_conf 99769999954999999999999999889959999774699766987898872992883788654678766121232038 Q ss_pred EEEEEECCHHHHHHHHCCCCCCHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC Q ss_conf 5788411188898852024552146667522-799689840566000003889999999864000134652125531032 Q gi|254780622|r 84 LLVVAPASANFIAHVAHGMVYDLASAILLAK-GDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNG 162 (405) Q Consensus 84 ~~iVaPaTaNtiaK~A~GiaD~llt~~~la~-~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~ 162 (405) ++||||||||||||+|+|+|||++|++++|+ .++|+++|||||++||+||+||+|+++|+++|++|++|++|.|| ||+ T Consensus 81 l~lIaPaTANtiaK~A~GiaDnllt~~~lA~~~~~Pv~iaPAMn~~Mw~~p~tq~nl~~L~~~G~~ii~P~~G~La-cg~ 159 (180) T PRK07313 81 LFLVAPATANTIAKLAHGIADNLVTSVALALPATTPKLIAPAMNTKMYQNPATQRNIKRLKEDGVTIIEPKEGLLA-CGD 159 (180) T ss_pred EEEEECCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHCHHHHHHHHHHHHCCCEEECCCCCCCC-CCC T ss_conf 8898108686999998412472999999972689988995177888887988999999999789899869745107-998 Q ss_pred CCCCCCCCHHHHHHHHHHHH Q ss_conf 23334345589999999863 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLL 182 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~ 182 (405) +|.|||+||++|++++.++| T Consensus 160 ~G~Grm~e~~~Iv~~i~~~l 179 (180) T PRK07313 160 EGYGALAEIDTILSTIENLL 179 (180) T ss_pred CCCCCCCCHHHHHHHHHHHH T ss_conf 12568999999999999975 No 6 >pfam04127 DFP DNA / pantothenate metabolism flavoprotein. The DNA/pantothenate metabolism flavoprotein (EC:4.1.1.36) affects synthesis of DNA, and pantothenate metabolism. Probab=100.00 E-value=0 Score=429.56 Aligned_cols=189 Identities=38% Similarity=0.552 Sum_probs=173.3 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--CCCCEEEEEHHHHHHHHHHHHHC Q ss_conf 7977898404201010213576215772788999999982588389984156677--65674675465778999999850 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--DPPNVMTIHVERAEDMLQEVLKA 268 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--~~~~~~~i~v~t~~em~~~~~~~ 268 (405) +||+||||+|||+|||||||||||+|||+||++||++|+++||+||||+||++.. +|.++++++|+|++||++++++. T Consensus 1 kgk~vlITaG~T~E~ID~VR~ItN~SSGkmG~alA~~~~~~Ga~V~li~g~~~~~~~~~~~~~~i~v~t~~em~~~~~~~ 80 (197) T pfam04127 1 KGRRVLVTSGGTREPIDPVRFISNFSSGKMGAAIAEEFLKRGADVTLIAGKGSLKPEPSGNLLIIPVETAEEMLNALKEI 80 (197) T ss_pred CCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHH T ss_conf 99899993688644438831536269559999999999978993899723565566898881899968999999999974 Q ss_pred CC--CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCC----CHHHHHHHH Q ss_conf 58--887997404444432222101123345577510455218068988762148995899981141----238999999 Q gi|254780622|r 269 LP--VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAET----QCIEQNARE 342 (405) Q Consensus 269 ~~--~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET----~~l~~~A~~ 342 (405) .+ +|++|||||||||+|...+++||||. +.++|+|++|||||+++++. .|++++||||||| ++++++|++ T Consensus 81 ~~~~~D~~I~aAAVsDf~p~~~~~~Kikk~---~~~~l~L~~tpdIL~~i~~~-~~~~~lVGFaaEt~~~~e~li~~A~~ 156 (197) T pfam04127 81 APDLHDVFILAAAVSDFRPKEMAEHKISSG---SELTLELKPNPKIISYVKEW-NPNAFLVGFKAETGVDEEELIDKARK 156 (197) T ss_pred CCCCCCEEEEEEECCCCCCCCHHCCEECCC---CCCCCCCCCCHHHHHHHHHH-CCCCEEEEEEECCCCCHHHHHHHHHH T ss_conf 756577999910004455400110664678---75513346883699998875-79967999980638857899999999 Q ss_pred HHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHH Q ss_conf 9997499899992057767777766118999836985972789989 Q gi|254780622|r 343 KLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKA 388 (405) Q Consensus 343 Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~ 388 (405) ||++|+||+||||+++ +||+|+|+++||++++. +++.+||. T Consensus 157 KL~~K~~D~IvAN~v~----~fgsd~n~v~ii~~~~~-e~~~~sKk 197 (197) T pfam04127 157 KLEKYNHDLVIANDVE----GFGTDKNRVIIVSKNEV-ELVLTSKK 197 (197) T ss_pred HHHHCCCCEEEECCCC----CCCCCCCEEEEEECCCE-EECCCCCC T ss_conf 9997599999982777----55888508999979987-90476889 No 7 >PRK09620 hypothetical protein; Provisional Probab=100.00 E-value=0 Score=420.27 Aligned_cols=206 Identities=24% Similarity=0.290 Sum_probs=179.7 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC---CCCEEEEEHHHHHHHHHHHH Q ss_conf 179778984042010102135762157727889999999825883899841566776---56746754657789999998 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIAD---PPNVMTIHVERAEDMLQEVL 266 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~---~~~~~~i~v~t~~em~~~~~ 266 (405) |+|||||||+|||+|||||||||||+||||||++||++|++|||+||||+|+++..+ +.++++++++|+.||.+++. T Consensus 1 L~GkkVLITaG~T~E~IDpVR~ItN~SSGkmG~aiA~~a~~~GA~Vtli~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~ 80 (229) T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMK 80 (229) T ss_pred CCCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHHH T ss_conf 99989999588875666884562776823999999999997799799994588778987788835898500999999999 Q ss_pred HCC---CCCEEEEEHHHHHHHHHHHHH---------CCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCC Q ss_conf 505---888799740444443222210---------11233455775104552180689887621489958999811412 Q gi|254780622|r 267 KAL---PVDIAVMVSAVSDWRFPKIAG---------TKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQ 334 (405) Q Consensus 267 ~~~---~~D~~I~aAAVSDf~~~~~~~---------~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~ 334 (405) ... ++|++||+||||||+|+++++ +|++ + +..+.|+|++|||||+++++ +.|++++|||||||+ T Consensus 81 ~~~~~~~~D~~I~aAAVsDf~~~~~~~~~~~~~~~~~Ki~--s-~~~~~i~L~~tpdIl~~i~~-~~~~~~lVGFkaEt~ 156 (229) T PRK09620 81 SIITHEKVDAVIMAAAGSDWVVDKICDQEGNVLDMNGKIS--S-DIAPIIHFQKAPKVLKQIKQ-WDPETVLVGFKLESD 156 (229) T ss_pred HHHCCCCCCEEEECCCHHCCCCCCCCCCCCCCHHHCCCCC--C-CCCCEEECCCCHHHHHHHHH-HCCCCEEEEEEECCC T ss_conf 9845678899999545020131302323232001126767--7-87553321257799999872-389986999983788 Q ss_pred ----HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCC Q ss_conf ----3899999999974998999920577677777661189998369859727899899999999999998517 Q gi|254780622|r 335 ----CIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVADRLCHLIVEHLGM 404 (405) Q Consensus 335 ----~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA~~Il~~i~~~L~~ 404 (405) +++++|++||++|+|||||||++.. |+++.|++|||++++.... .++|.++|++|+++|...++. T Consensus 157 ~~~e~Li~~A~~kl~~k~~D~ivAN~~~~----~~~~~~~~~ii~~d~~~~~-~~sK~eiA~~I~~~i~~l~~~ 225 (229) T PRK09620 157 VNEEELFERAKNRMEEAKASVMIANSPHS----LYSRGAMHYVIGQDGKGQL-CNGKDETAKEIVKRLEVLCNH 225 (229) T ss_pred CCHHHHHHHHHHHHHHCCCCEEEECCHHH----CCCCCCEEEEECCCCCEEC-CCCHHHHHHHHHHHHHHHHHH T ss_conf 96789999999999976999999848766----5789865999928994762-789999999999999999766 No 8 >PRK06732 phosphopantothenate--cysteine ligase; Validated Probab=100.00 E-value=0 Score=419.01 Aligned_cols=200 Identities=29% Similarity=0.425 Sum_probs=178.7 Q ss_pred CEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC--CCEEEEEHHHHHHHHHHHHHCCC Q ss_conf 7789840420101021357621577278899999998258838998415667765--67467546577899999985058 Q gi|254780622|r 193 KRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADP--PNVMTIHVERAEDMLQEVLKALP 270 (405) Q Consensus 193 k~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~--~~~~~i~v~t~~em~~~~~~~~~ 270 (405) .|||||+|||+|||||||||||+||||||++||++|+.+||+||||+||+++.++ +++++++|+|++||++++.+.++ T Consensus 1 ~kvLITaG~T~E~ID~VR~IsN~SSGk~G~aiA~~~~~~Ga~Vtli~g~~~~~p~~~~~~~~i~v~ta~em~~~~~~~~~ 80 (228) T PRK06732 1 MKILITSGGTTEPIDAVRGITNHSTGQLGKIIAETFLQAGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLATLKPLVP 80 (228) T ss_pred CEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCC T ss_conf 98999578876676884476767814999999999997899899995677568898898589994589999999997478 Q ss_pred -CCEEEEEHHHHHHHHHHH--------------------HHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEE Q ss_conf -887997404444432222--------------------10112334557751045521806898876214899589998 Q gi|254780622|r 271 -VDIAVMVSAVSDWRFPKI--------------------AGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGF 329 (405) Q Consensus 271 -~D~~I~aAAVSDf~~~~~--------------------~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGF 329 (405) +|++||+||||||+|... ..+|+ ++..+.+.|+|++|||||+.+ +.|.|++++||| T Consensus 81 ~~D~~I~aAAVsDy~p~~~~~~~~~~~~~~~~~~~~~~~~~~Ki--~s~~~~~~l~L~~~pkil~~v-~~~~~~~~~VGF 157 (228) T PRK06732 81 HHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLCKPNSESKI--SSASDYQVLFLKKTPKVISYV-KQWNPNIKLVGF 157 (228) T ss_pred CCCEEEEEEEECCCEEHHHHHHHHHHCCCHHHHHHCCCCHHCCC--CCCCCCCEEECCCCCHHHHHH-HHHCCCCEEEEE T ss_conf 99999993181015210110345543010034431132011153--568873364143581999998-854899658986 Q ss_pred ECCC----CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHH Q ss_conf 1141----23899999999974998999920577677777661189998369859727899899999999999998 Q gi|254780622|r 330 AAET----QCIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVADRLCHLIVEH 401 (405) Q Consensus 330 kaET----~~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA~~Il~~i~~~ 401 (405) |||| ++++++|++||++||||+||||+++. ||+|+|+++||++++.+. ..+|.++|++|+|+|.++ T Consensus 158 klet~~~~e~Li~~A~~kL~~k~~D~ivAN~v~~----~g~d~n~~~ii~~~~~~~--~~sK~eiA~~i~~~i~k~ 227 (228) T PRK06732 158 KLLVNVSKEELFKVARASLIKNQADYILANDLTD----ISAGQHKALLVSKNEVQS--ADTKEEIADLLYERIEKH 227 (228) T ss_pred EEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCC----CCCCCEEEEEEECCCEEE--CCCHHHHHHHHHHHHHHC T ss_conf 6423765679999999999976999999926663----589952999995899284--689999999999999734 No 9 >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase; InterPro: IPR011848 In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis. These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This entry describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of IPR005252 from INTERPRO, corresponding to phosphopantothenate--cysteine ligase activity .. Probab=100.00 E-value=0 Score=322.01 Aligned_cols=201 Identities=27% Similarity=0.359 Sum_probs=177.3 Q ss_pred CEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC--CEEEEEHHHHHHHHHHHHHCC- Q ss_conf 77898404201010213576215772788999999982588389984156677656--746754657789999998505- Q gi|254780622|r 193 KRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPP--NVMTIHVERAEDMLQEVLKAL- 269 (405) Q Consensus 193 k~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~--~~~~i~v~t~~em~~~~~~~~- 269 (405) .+||||||||.||||.||.|||+|||..|..||+.+++.||+||||+.+..+.|.+ ++...++++.+|+..++.+.. T Consensus 1 Mk~LvTsGGTsE~ID~VRSITNHStG~LGK~IaE~fL~~Gh~VtlvTTK~A~kP~~~~~Lsi~Eie~~~~L~~~L~~~v~ 80 (253) T TIGR02114 1 MKILVTSGGTSEPIDNVRSITNHSTGGLGKIIAEKFLAAGHEVTLVTTKRALKPEPQLNLSIKEIETVKDLLTTLKELVA 80 (253) T ss_pred CCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCC T ss_conf 93688158863666663551233768721799999986587897875361218888888624864277899999887501 Q ss_pred C--CCEEEEEHHHHHHHHHH------------------------------------------HHHCCCCCCCCCCCCEEE Q ss_conf 8--88799740444443222------------------------------------------210112334557751045 Q gi|254780622|r 270 P--VDIAVMVSAVSDWRFPK------------------------------------------IAGTKIKRKDIGDTMRID 305 (405) Q Consensus 270 ~--~D~~I~aAAVSDf~~~~------------------------------------------~~~~Kikk~s~~~~l~L~ 305 (405) + +|++||++|||||+|.. -...|| ||..|.+.|- T Consensus 81 ~kq~d~liHsMAVSDYTpvym~~~E~v~~SfaqqLseqtLPktkeaLvtivq~~L~~fl~~~n~~~KI--SS~~d~qvlF 158 (253) T TIGR02114 81 EKQHDILIHSMAVSDYTPVYMTDLEQVKDSFAQQLSEQTLPKTKEALVTIVQDNLNEFLDKDNHETKI--SSDSDYQVLF 158 (253) T ss_pred CCCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCEEEE T ss_conf 25543888851126885100011678999998755420365201452233365367773124667875--5533524555 Q ss_pred EEECHHHHHHHHHCCCCCCEEEEEECCC----CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEE Q ss_conf 5218068988762148995899981141----238999999999749989999205776777776611899983698597 Q gi|254780622|r 306 LMENPDILKIIGHHQCRPSIVVGFAAET----QCIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEE 381 (405) Q Consensus 306 L~~~pdIL~~i~~~k~~~~~lVGFkaET----~~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~ 381 (405) |++||||+..+ +.|.|...||||||-. |+|.+-||..|.++.||||+||||-+ ..++.++++||+.+|... T Consensus 159 LKKtPKvIslv-k~wnP~i~LvGFKLLVnV~~e~Lv~vAr~sL~KN~adfiLANDL~~----i~~~~H~alLi~~~G~v~ 233 (253) T TIGR02114 159 LKKTPKVISLV-KDWNPQIKLVGFKLLVNVTQEELVKVARASLIKNRADFILANDLVD----ISETEHKALLIEENGEVQ 233 (253) T ss_pred ECCCCCEEEEE-ECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCC----CCCCCCEEEEECCCCEEE T ss_conf 51799367776-5369947898677404378656899999854204557766534201----454566588761786167 Q ss_pred CCCCCHHHHHHHHHHHHHHH Q ss_conf 27899899999999999998 Q gi|254780622|r 382 YPELPKAEVADRLCHLIVEH 401 (405) Q Consensus 382 ~~~~sK~~iA~~Il~~i~~~ 401 (405) ...||++||.-|++.+.++ T Consensus 234 -~a~tKe~Ia~Ll~e~v~k~ 252 (253) T TIGR02114 234 -EAQTKEEIAELLYEKVEKY 252 (253) T ss_pred -EEECHHHHHHHHHHHHHCC T ss_conf -7535689999988854226 No 10 >KOG0672 consensus Probab=100.00 E-value=1.8e-42 Score=293.05 Aligned_cols=178 Identities=34% Similarity=0.505 Sum_probs=154.8 Q ss_pred CCC-EEEEEEECHHHHHHHHHHHHHHHHC-C---CEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCC----CCCCCC Q ss_conf 855-6999952847899999999999987-9---889998585686306989999974797582076788----778774 Q gi|254780622|r 4 SGK-KIALIMCGSVAVYKSLDLIRRLRER-G---AVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYK----EGYESN 74 (405) Q Consensus 4 ~~k-~IllgvtGsiaa~k~~~l~~~L~~~-g---~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~----~~~~~~ 74 (405) .|| +||+|.|||+|++|.+.+++.|-+- | .+|+||+|++|..|.....+... -.+|+|.+.|+ -..++. T Consensus 18 d~K~hvL~gaTGSvA~iK~~~li~kL~ei~G~dki~iqvvvT~~a~~f~~~~~l~~~--v~~~~d~DeW~~W~~r~dpVL 95 (218) T KOG0672 18 DGKFHVLLGATGSVAVIKLPLLIKKLEEIYGRDKISIQVVVTKSATHFLEKLKLNKH--VQLYTDEDEWKMWKSRSDPVL 95 (218) T ss_pred CCCEEEEEEECCCCCEEEHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHCCCCCC--EEEECCHHHHHHHHHCCCCEE T ss_conf 886469997136300002588999999861776236999981408889852446640--353057577665330588535 Q ss_pred CCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCC-CCCEEEECCCCCHHHHHHHHHHHHHHHHH--HCCCCCC Q ss_conf 30011446557884111888988520245521466675227-99689840566000003889999999864--0001346 Q gi|254780622|r 75 HIQLANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKG-DQPVLIAPAMNFMMWAKPATQRNVEILQK--DGCYFIG 151 (405) Q Consensus 75 Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~-~~pi~iaPaMn~~M~~~p~~~~nl~~L~~--~g~~vi~ 151 (405) ||+|.||||+++|||.||||+||+|+|+||||||++..|+. .+|+++|||||+.||+||.|++++..|++ .|+.++. T Consensus 96 HIeLRrWADilliAPLsANTlaKiA~GlCDNLLTsviRAW~~skPil~aPaMnT~mw~np~T~~hl~~l~~~~~~~~~i~ 175 (218) T KOG0672 96 HIELRRWADILLIAPLSANTLAKIANGLCDNLLTSVIRAWDPSKPILLAPAMNTLMWNNPMTKKHLTSLKEEYPGITVIK 175 (218) T ss_pred EEHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEC T ss_conf 43476653653434367215999872344678999999716678657623222354238104999999987547848965 Q ss_pred CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC Q ss_conf 521255310322333434558999999986310 Q gi|254780622|r 152 PESGAMAESNGYGVGRMSEPCDIIRQITWLLYK 184 (405) Q Consensus 152 P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~ 184 (405) |..+.|. |||+|.|.|+|+.+|+..+...+.. T Consensus 176 pieK~li-cGDiGlG~Mae~~~IV~~V~~~~~~ 207 (218) T KOG0672 176 PIEKVLI-CGDIGLGGMAEWGTIVSKVRRKLGE 207 (218) T ss_pred CHHEEEE-CCCCCCCCCCCHHHHHHHHHHHHHC T ss_conf 6210675-1564753104188899999999702 No 11 >PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed Probab=100.00 E-value=1.3e-40 Score=281.11 Aligned_cols=172 Identities=22% Similarity=0.279 Sum_probs=143.4 Q ss_pred CCCCCCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEECHHHHHHCCHH--------HHHHHHCCCCCCCCCCCCCCC Q ss_conf 9888556999952847899-9999999999879889998585686306989--------999974797582076788778 Q gi|254780622|r 1 MDLSGKKIALIMCGSVAVY-KSLDLIRRLRERGAVVIPVMTKSAQKFITPL--------IVGAISNRRVYTHLLSYKEGY 71 (405) Q Consensus 1 m~l~~k~IllgvtGsiaa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~--------~l~~lt~~~v~~~~~~~~~~~ 71 (405) |+|+||||++|||||||+| |+.+++|+|+++|++|++|||++|++|+++. .++++||++|++++++ T Consensus 1 M~L~gK~I~lgvTGSiaay~kv~~~ir~L~~~GA~V~~ImS~~a~~~~Trfg~~~~~~~~le~iTg~~vi~ti~~----- 75 (195) T PRK08305 1 MSLKGKRIGFGLTGSHCTYEEVMPQIEKLVAEGAEVRPIVSYTVQTTDTRFGEGEEWIKKIEEITGFKVINSIVE----- 75 (195) T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEECCC----- T ss_conf 976898899996727998999999999999879969999754477505667527889999999859952001345----- Q ss_pred CCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHH--HCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 77430011446557884111888988520245521466675--2279968984056600000388999999986400013 Q gi|254780622|r 72 ESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAILL--AKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYF 149 (405) Q Consensus 72 ~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~l--a~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~v 149 (405) .+|+...+|+|+|||||||+|||+|+||||+|++++..+- .++++||+++||||..||.|+. |+.+|.+.++++ T Consensus 76 -aE~igp~~~~D~lvIAPaTaNtiaKLAnGI~DtpV~maaka~Lrn~kPVvia~stNd~l~~n~~---Ni~~Ll~~kniy 151 (195) T PRK08305 76 -AEPLGPKKPLDCMVIAPCTGNTMAKLANGITDSPVLMAAKATLRNQKPVVLAISTNDALGLNAV---NLGRLLNTKNIY 151 (195) T ss_pred -CEECCCCCCCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHCHH---HHHHHHHCCCEE T ss_conf -5133667633689990075418999865355877999999986279988999836867876899---999998269789 Q ss_pred CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH Q ss_conf 4652125531032233343455899999998631 Q gi|254780622|r 150 IGPESGAMAESNGYGVGRMSEPCDIIRQITWLLY 183 (405) Q Consensus 150 i~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~ 183 (405) ..| .|.-. |......-.++.+.|.+.++..+. T Consensus 152 fvP-fgqd~-~~~Kp~slva~~~~l~~t~~~Al~ 183 (195) T PRK08305 152 FVP-FGQDD-PEKKPNSLVARMDLLIPTIEEALQ 183 (195) T ss_pred EEE-CCCCC-CCCCCHHHHHCHHHHHHHHHHHHC T ss_conf 995-68867-344704565059877999999964 No 12 >TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase; InterPro: IPR011847 In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis. These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This entry describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of IPR005252 from INTERPRO, corresponding to phosphopantothenoylcysteine decarboxylase activity .. Probab=100.00 E-value=2.1e-41 Score=286.30 Aligned_cols=174 Identities=41% Similarity=0.584 Sum_probs=167.1 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE Q ss_conf 56999952847899999999999987988999858568630698999997479758207678877877430011446557 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECDLL 85 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD~~ 85 (405) ++|+++|+|||++||+.++.+.|.+.|++|.++||++|++||+|++++.++.++|+.+......+..++||+|++.+|+| T Consensus 1 ~~i~lav~Gsi~~yk~adl~~~l~k~G~~v~~lmt~~~~~fi~Pltlq~ls~n~~~~~vm~e~~P~~~nhi~lak~~~lf 80 (177) T TIGR02113 1 KKILLAVSGSIAAYKAADLTSQLTKLGYDVEVLMTKAATEFITPLTLQVLSKNPVHLDVMKEEDPKVINHIELAKKADLF 80 (177) T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHCCCCEE T ss_conf 90578750103456677789998745861577520114645140354454100467876412476323354431125547 Q ss_pred EEEECCHHHHHHHHCCCCCCHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCC Q ss_conf 88411188898852024552146667522-79968984056600000388999999986400013465212553103223 Q gi|254780622|r 86 VVAPASANFIAHVAHGMVYDLASAILLAK-GDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYG 164 (405) Q Consensus 86 iVaPaTaNtiaK~A~GiaD~llt~~~la~-~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G 164 (405) +|+||||||++++|+|.+||+++++.++- ...|-+++||||+.||+||++|+|++.|++.|+..+.|+...|| |||.| T Consensus 81 ~~~Pa~a~t~~~la~G~ad~~~~~~alal~~~~Pk~~aPamnt~my~~~~~q~n~~~l~~~~y~~i~P~~~lla-CGd~G 159 (177) T TIGR02113 81 LVAPASANTIAKLAHGFADNLVTSVALALPSEVPKLIAPAMNTKMYQNPITQKNIKILKKIGYQEIQPKESLLA-CGDVG 159 (177) T ss_pred EEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHC-CCCCC T ss_conf 87054367899874022457888988765330530221245666652045688999998604100264045310-27888 Q ss_pred CCCCCCHHHHHHHHHH Q ss_conf 3343455899999998 Q gi|254780622|r 165 VGRMSEPCDIIRQITW 180 (405) Q Consensus 165 ~grl~e~~~I~~~~~~ 180 (405) .|.+++.+.|+..+.. T Consensus 160 ~Gala~~~~il~~~~~ 175 (177) T TIGR02113 160 RGALADLETILEKIKE 175 (177) T ss_pred CCHHHHHHHHHHHHHH T ss_conf 8326779999999884 No 13 >pfam02441 Flavoprotein Flavoprotein. This family contains diverse flavoprotein enzymes. This family includes epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN. This enzyme catalyses the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance. dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase (EC:4.1.1.-). Probab=99.97 E-value=1.2e-31 Score=223.50 Aligned_cols=116 Identities=42% Similarity=0.579 Sum_probs=108.1 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE Q ss_conf 56999952847899999999999987988999858568630698999997479758207678877877430011446557 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECDLL 85 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD~~ 85 (405) |||++|||||+++|++++++++|++.|++|+++||++|++|+++.++++.++++++++.+++ ..+.|+++++|+|+| T Consensus 1 kri~l~itGs~~a~~~~~ll~~L~~~~~~v~vv~S~~A~~~~~~~~~~~~~~~~~~~~~~~~---~~~~h~~~~~~~D~~ 77 (118) T pfam02441 1 KKILLGITGSSAAIKALRLLRELKKEGAEVRVILSKAAKKFITPETLEALLGNPVYTDENDE---GAPIHIELSRWADLM 77 (118) T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCEEEECCCC---CCCCCCCCCCCCCEE T ss_conf 97999991789999999999999878997999976269876777668886099599972688---886511013455749 Q ss_pred EEEECCHHHHHHHHCCCCCCHHHHHHHHC--CCCCEEEECC Q ss_conf 88411188898852024552146667522--7996898405 Q gi|254780622|r 86 VVAPASANFIAHVAHGMVYDLASAILLAK--GDQPVLIAPA 124 (405) Q Consensus 86 iVaPaTaNtiaK~A~GiaD~llt~~~la~--~~~pi~iaPa 124 (405) +|+|||+|||||+|+|++|||++++++++ .++|++++|+ T Consensus 78 iI~PaSantlakiA~GiaD~ll~~~a~~~lk~~~pvii~Pa 118 (118) T pfam02441 78 VVAPATANTLAKIANGIADNLLTRAALAALKERKPLVIAPA 118 (118) T ss_pred EEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECC T ss_conf 98041499999997555797999999998426997899469 No 14 >KOG2728 consensus Probab=99.96 E-value=2.1e-28 Score=202.60 Aligned_cols=202 Identities=27% Similarity=0.412 Sum_probs=153.9 Q ss_pred CCCC-EEEEEECCCHHEEC--CEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC-----C-------------- Q ss_conf 1797-78984042010102--135762157727889999999825883899841566776-----5-------------- Q gi|254780622|r 190 LKGK-RALVTSGPTYEPLD--PMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIAD-----P-------------- 247 (405) Q Consensus 190 l~gk-~vlITaG~T~E~ID--~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~-----~-------------- 247 (405) ++|. =|+||+|||..|+. +||||.|+|+|..|.+-|+++.+.|+.|+++|-..++.+ | T Consensus 28 ~~~rrIVlVTSGGTtVPLE~ntVRFiDNFSaGtRGAaSAE~Fl~agYaVIFl~R~~Sl~Py~R~f~~~~~~~~l~~~g~~ 107 (302) T KOG2728 28 LQGRRIVLVTSGGTTVPLEQNTVRFIDNFSAGTRGAASAEYFLAAGYAVIFLYRERSLFPYTRHFPGQTWFLFLRPSGSA 107 (302) T ss_pred CCCCEEEEEECCCEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCC T ss_conf 55864999944985721355725765055767765031899986794599986046666420248972123332557743 Q ss_pred --------C--------------------CEEEEEHHHHHHHH---HHHHHCC----CCCEEEEEHHHHHHHHHH--HHH Q ss_conf --------6--------------------74675465778999---9998505----888799740444443222--210 Q gi|254780622|r 248 --------P--------------------NVMTIHVERAEDML---QEVLKAL----PVDIAVMVSAVSDWRFPK--IAG 290 (405) Q Consensus 248 --------~--------------------~~~~i~v~t~~em~---~~~~~~~----~~D~~I~aAAVSDf~~~~--~~~ 290 (405) + .+-.+++.|..|++ +++-+++ +.-+++.|||||||.++. ... T Consensus 108 ~~~~i~~~e~~~~vf~~~~~~~k~~~k~~~lL~vpFtT~~~Yl~~L~aiae~Ln~~~sramfYLAAAVSDFyVP~~~mpe 187 (302) T KOG2728 108 LSGLIEKEENALPVFAEALEKYKYAEKAGTLLYVPFTTLADYLWLLRAIAEALNPLGSRAMFYLAAAVSDFYVPESEMPE 187 (302) T ss_pred CCCCEECCCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHCCH T ss_conf 46631048302589999998878888619489984204999999999999984534624799999875335258222644 Q ss_pred CCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCH--HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC Q ss_conf 112334557751045521806898876214899589998114123--899999999974998999920577677777661 Q gi|254780622|r 291 TKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQC--IEQNAREKLLNKGADFIVSNCILPDTGFVGKEW 368 (405) Q Consensus 291 ~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~--l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~ 368 (405) +|| +|++..|.++|.+.||.|..+...|.|+.++|.||+||++ ++.+|++-|.+++-.++|||.++. .. T Consensus 188 HKI--qSg~~~l~i~l~~VPK~L~~Lv~~WaP~AfiiSFKLETDesiLi~KAr~AL~kY~HqlVIAN~LsT-------Rk 258 (302) T KOG2728 188 HKI--QSGSGPLQITLKPVPKMLSPLVSDWAPKAFIISFKLETDESILINKARKALEKYKHQLVIANLLST-------RK 258 (302) T ss_pred HHC--CCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEHHHH-------CC T ss_conf 210--358998447833366889999985076507999983277178789999999972750564002330-------43 Q ss_pred EEEEEECCCCEEECCCCCHHH--HHHHHHHHHHHH Q ss_conf 189998369859727899899--999999999998 Q gi|254780622|r 369 NKVSIVFPDKIEEYPELPKAE--VADRLCHLIVEH 401 (405) Q Consensus 369 n~v~li~~~~~~~~~~~sK~~--iA~~Il~~i~~~ 401 (405) .+|.+++++-. .+...+|.. |..-|++.++.+ T Consensus 259 ~~V~fVt~~~~-~~~~l~~~~~~IE~~ii~~vv~r 292 (302) T KOG2728 259 SRVVFVTKNIV-QWLELDKAPGAIEDSIIKLVVSR 292 (302) T ss_pred EEEEEEECCCC-EEEECCCCCCHHHHHHHHHHHHH T ss_conf 05999926731-02461666322677889999998 No 15 >PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional Probab=99.90 E-value=3.9e-23 Score=168.69 Aligned_cols=159 Identities=18% Similarity=0.204 Sum_probs=120.5 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHC-CCEEEEEECHHHHHHCCHHH------HHHHHCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 56999952847899999999999987-98899985856863069899------999747975820767887787743001 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRER-GAVVIPVMTKSAQKFITPLI------VGAISNRRVYTHLLSYKEGYESNHIQL 78 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~-g~~V~vv~T~~A~~fi~~~~------l~~lt~~~v~~~~~~~~~~~~~~Hi~l 78 (405) |||+|||||+..++.+.++++.|.+. ++||++|+|++|++++...+ ++.+.. .+|.+. ++. .++-+- T Consensus 2 krIvvgITGASGa~ya~rll~~L~~~~~~ev~lv~S~~A~~v~~~E~~~~~~~~~~~~~-~~~~~~-d~~----A~iASG 75 (187) T PRK06029 2 KRLIVGISGASGAIYGVRLLQVLRDVEEVETHLVISQAARQTLAHELDFSLREVQALAD-VVHDVR-DIG----ASIASG 75 (187) T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCCCHHHHHHHHH-EECCHH-CCC----CCCCCC T ss_conf 73999985288899999999998642895699998868999999993998888655554-047730-107----875545 Q ss_pred CCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH Q ss_conf 144655788411188898852024552146667--522799689840566000003889999999864000134652125 Q gi|254780622|r 79 ANECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGA 156 (405) Q Consensus 79 ~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~ 156 (405) +.+.|.|||+|||+||+|++|+|++|||++..+ +...++|++++| ..|-.|.+..||+.+|.+.|+.|++|..|. T Consensus 76 S~~~d~MvI~PCSm~TLa~IA~G~sdnLi~RaAdV~LKErR~Lvlvp---REtPls~ihLeNMl~ls~~GaiI~P~~P~F 152 (187) T PRK06029 76 SFGTDGMVIAPCSMKTLAKIAHGYSDNLLTRAADVMLKERRRLVLCV---RETPLHLGHLRNMTKLAEMGAIIMPPVPAF 152 (187) T ss_pred CCHHCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEE---CCCCCCHHHHHHHHHHHHCCCEEECCCCCC T ss_conf 63007579941548899999700458889999999987178189997---688976899999999998899894798200 Q ss_pred HHHCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 5310322333434558999999986 Q gi|254780622|r 157 MAESNGYGVGRMSEPCDIIRQITWL 181 (405) Q Consensus 157 la~c~~~G~grl~e~~~I~~~~~~~ 181 (405) - .+--..+++++++..- T Consensus 153 Y--------~~p~si~dlv~fvvgr 169 (187) T PRK06029 153 Y--------HRPQTLEDMVDQTVGR 169 (187) T ss_pred C--------CCCCCHHHHHHHHHHH T ss_conf 2--------7999899999999999 No 16 >PRK05920 aromatic acid decarboxylase; Validated Probab=99.84 E-value=2e-19 Score=144.86 Aligned_cols=161 Identities=19% Similarity=0.215 Sum_probs=116.0 Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHH------HHHHH-----CC--------CCCCCCC Q ss_conf 55699995284789999999999998798899985856863069899------99974-----79--------7582076 Q gi|254780622|r 5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLI------VGAIS-----NR--------RVYTHLL 65 (405) Q Consensus 5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~------l~~lt-----~~--------~v~~~~~ 65 (405) -|||++||||...+.-...+++.|++.|++|++|+|++|.+.+...+ .+.+. .+ .+|.+ . T Consensus 4 mkrivvgITGASG~~ya~rll~~L~~~~~ev~lviS~~a~~v~~~E~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~ 82 (205) T PRK05920 4 MKRIVLAITGASGAIYGVRLLECLLAADYEVHLVISKAARKVLATETGLKLPAVPDLAEAFLREQLGANAGQLRVHGK-D 82 (205) T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCH-H T ss_conf 875999986542799999999999867998999986789999999849984304788988877530256774478377-6 Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHH Q ss_conf 7887787743001144655788411188898852024552146667--52279968984056600000388999999986 Q gi|254780622|r 66 SYKEGYESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQ 143 (405) Q Consensus 66 ~~~~~~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~ 143 (405) +...+..+. +...|.|+|+|||++|+|++|+|++|||++..+ +...++|++++| ..|-.|.+..||+.+|. T Consensus 83 d~~A~iASG----S~~~dgMvV~PCSm~TLa~IA~G~sdnLi~RaAdV~LKErR~LVlvp---REtPls~iHLeNMlkls 155 (205) T PRK05920 83 DWGAPIASG----SFATDGMVIAPCSMGTLAAIAHGLSDNLIERAADVVLKERRKLILVP---RETPLSLIHLENMLKLA 155 (205) T ss_pred HCCCCCCCC----CCCCCCEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEE---CCCCCCHHHHHHHHHHH T ss_conf 427865667----76658369941528789998734645589999999998568179997---68897689999999999 Q ss_pred HHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 40001346521255310322333434558999999986 Q gi|254780622|r 144 KDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWL 181 (405) Q Consensus 144 ~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~ 181 (405) +.|+.|++|..|.- .|--..+++++++..- T Consensus 156 ~~GaiI~P~~P~FY--------~~P~tiedlvdfvvgr 185 (205) T PRK05920 156 EAGAVILPAIPAFY--------HKPQTIDDLVDFVVAR 185 (205) T ss_pred HCCCEEECCCCCCC--------CCCCCHHHHHHHHHHH T ss_conf 88998947982002--------7999899999999999 No 17 >TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases; InterPro: IPR004507 This family contains flavoproteins, which are aromatic acid decarboxylases. An example is the Saccharomyces cerevisiae gene, PAD1 that encodes phenylacrylic acid decarboxylase. Mutations of this gene are viable and confer resistance to cinnamic acid. ; GO: 0016831 carboxy-lyase activity. Probab=99.77 E-value=8.3e-18 Score=134.39 Aligned_cols=157 Identities=24% Similarity=0.297 Sum_probs=119.4 Q ss_pred EEEEEEEC-HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCC------HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 69999528-4789999999999998798899985856863069------8999997479758207678877877430011 Q gi|254780622|r 7 KIALIMCG-SVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFIT------PLIVGAISNRRVYTHLLSYKEGYESNHIQLA 79 (405) Q Consensus 7 ~IllgvtG-siaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~------~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~ 79 (405) ||+|++|| |-.+| ...|+..|+..|+||+.|.|++|...+. +..++.|-. ++|.+. |......++ + T Consensus 1 ~ivVa~TGAsGvI~-G~RLL~~Lk~~GvE~~LviS~~A~~tiK~Etd~~~~~v~~LAT-~~Y~~~-D~~a~i~SG----S 73 (181) T TIGR00421 1 KIVVAITGASGVIY-GIRLLEVLKELGVEVHLVISKWAKKTIKYETDYDPGEVEELAT-KYYDED-DFAAPIASG----S 73 (181) T ss_pred CEEEEECCHHHHHH-HHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHH-HHCCHH-HHHHHHCCC----C T ss_conf 95786222448999-9999999986793687863558999998853899889999967-532611-211000157----8 Q ss_pred CCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH Q ss_conf 44655788411188898852024552146667--5227996898405660000038899999998640001346521255 Q gi|254780622|r 80 NECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAM 157 (405) Q Consensus 80 ~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~l 157 (405) ..+|.|+|+|||+-|+|-||+|++|||+|..+ +-..++..+++| ..|-.|-+..||+-+|.+.|..|++|..+.- T Consensus 74 f~~Dgm~VvPCSmKtLsaIa~G~a~NLitRAADV~LKErRkLvL~~---REtPL~SiHLENmL~L~~~G~IIlPP~PaFY 150 (181) T TIGR00421 74 FKFDGMVVVPCSMKTLSAIANGYAENLITRAADVALKERRKLVLVP---RETPLNSIHLENMLRLSRMGAIILPPVPAFY 150 (181) T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC---CCCCCCHHHHHHHHHHHHCCCEEECCCCCCC T ss_conf 6768268864856789999851105568889755422054246403---6788751548999999827925327955444 Q ss_pred HHCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 310322333434558999999986 Q gi|254780622|r 158 AESNGYGVGRMSEPCDIIRQITWL 181 (405) Q Consensus 158 a~c~~~G~grl~e~~~I~~~~~~~ 181 (405) -|=.+.+|+++++-.- T Consensus 151 --------~rPkS~~Dl~~~~VgR 166 (181) T TIGR00421 151 --------NRPKSVEDLIDFIVGR 166 (181) T ss_pred --------CCCCCHHHHHHHHHHH T ss_conf --------7898878898677987 No 18 >COG0163 UbiX 3-polyprenyl-4-hydroxybenzoate decarboxylase [Coenzyme metabolism] Probab=99.76 E-value=4.3e-17 Score=129.78 Aligned_cols=156 Identities=20% Similarity=0.222 Sum_probs=114.4 Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCC------------CCCCCCCCCCCCCC Q ss_conf 556999952847899999999999987988999858568630698999997479------------75820767887787 Q gi|254780622|r 5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNR------------RVYTHLLSYKEGYE 72 (405) Q Consensus 5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~------------~v~~~~~~~~~~~~ 72 (405) .+||++||||..-+.=...|+..|+..|.|+++|+|++|.+-+ ...+|+ .+|.+ .+...... T Consensus 2 ~~riivgisGASG~iygvrlLe~L~~~~~e~hlviS~~a~~~~-----~~E~~~~~~~~~~~~~a~~~~~~-~D~~A~iA 75 (191) T COG0163 2 MKRIIVGISGASGAIYGVRLLEVLRELGVETHLVISKAAKKTL-----KYETGNDESLGEVLALADVVHDE-KDIGAPIA 75 (191) T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHH-----HHHHCCCHHHHHHHHHCCEECCH-HHCCCCCC T ss_conf 8279999736642899999999997469569999867899999-----98747631067774201022678-77167655 Q ss_pred CCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 743001144655788411188898852024552146667--522799689840566000003889999999864000134 Q gi|254780622|r 73 SNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFI 150 (405) Q Consensus 73 ~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi 150 (405) +. +...|.|+|+|||+.|+|++|+|++|||++..+ .-..++|.+++| ..|-.|-+..||+-+|.+.|..|+ T Consensus 76 SG----S~~~~gMiI~PCSmkTla~IA~G~~dnLi~RAAdV~LKErR~LVLv~---REtPl~~ihLeNMlkls~~GaiI~ 148 (191) T COG0163 76 SG----SFRTDGMIIAPCSMKTLAAIAHGFADNLITRAADVALKERRPLVLVP---RETPLSLIHLENMLKLAEMGAIIM 148 (191) T ss_pred CC----CCCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEE---CCCCCCHHHHHHHHHHHHCCCEEC T ss_conf 78----87768479994727779999811421489898899886178259996---378854899999999998889865 Q ss_pred CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 6521255310322333434558999999986 Q gi|254780622|r 151 GPESGAMAESNGYGVGRMSEPCDIIRQITWL 181 (405) Q Consensus 151 ~P~~g~la~c~~~G~grl~e~~~I~~~~~~~ 181 (405) +|..+.-. |=-..|++++++..- T Consensus 149 Pp~PaFY~--------kP~sieDlvd~~v~r 171 (191) T COG0163 149 PPMPAFYH--------KPQSIEDLVDFVVGR 171 (191) T ss_pred CCCHHHHC--------CCCCHHHHHHHHHHH T ss_conf 79706644--------998899999999999 No 19 >TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit; InterPro: IPR014214 Members of this entry represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.. Probab=99.74 E-value=1.8e-17 Score=132.28 Aligned_cols=170 Identities=19% Similarity=0.316 Sum_probs=122.9 Q ss_pred CEEEEEEECHHHHHHHH-HHHHHHHHCCCEEEEEECHHHH----HHCCH----HHHHHHHCCCCCCCCCCCCCCCCCCCC Q ss_conf 56999952847899999-9999999879889998585686----30698----999997479758207678877877430 Q gi|254780622|r 6 KKIALIMCGSVAVYKSL-DLIRRLRERGAVVIPVMTKSAQ----KFITP----LIVGAISNRRVYTHLLSYKEGYESNHI 76 (405) Q Consensus 6 k~IllgvtGsiaa~k~~-~l~~~L~~~g~~V~vv~T~~A~----~fi~~----~~l~~lt~~~v~~~~~~~~~~~~~~Hi 76 (405) |||.+|.|||=..|... --+++|+..|+||.+|+|.+-+ ||-.+ .-+|.+||++++..+...++-.+ T Consensus 1 krIGfglTGSHCt~~~~~p~le~L~~~GAev~P~~s~~V~~T~TrFG~~~dwi~~~E~iTG~~~i~ti~~AEP~GP---- 76 (188) T TIGR02852 1 KRIGFGLTGSHCTLEAVMPQLEKLVEEGAEVTPIVSETVQTTDTRFGDGADWIKKIEEITGKKAINTIVEAEPFGP---- 76 (188) T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCC---- T ss_conf 9343113620116678989999999669848888630004356556861889999886306311300345545976---- Q ss_pred CCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHH--CCCCCEEEECCCCCHHHHHHHHHHHHHHH-HHHCCCCCCCC Q ss_conf 0114465578841118889885202455214666752--27996898405660000038899999998-64000134652 Q gi|254780622|r 77 QLANECDLLVVAPASANFIAHVAHGMVYDLASAILLA--KGDQPVLIAPAMNFMMWAKPATQRNVEIL-QKDGCYFIGPE 153 (405) Q Consensus 77 ~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la--~~~~pi~iaPaMn~~M~~~p~~~~nl~~L-~~~g~~vi~P~ 153 (405) ...-|+|||||||.||+||+||++.|+++...+=| ++++|||++=+-|...= ..-+||-.| ...+++||+=. T Consensus 77 --~~~LD~mviaP~TGNsmsKlANA~tDspVLMAAKA~lRN~~PVvLa~sTNDaLG---lNa~NL~~Ll~~KNIyFvPFG 151 (188) T TIGR02852 77 --KVPLDVMVIAPLTGNSMSKLANAITDSPVLMAAKATLRNNKPVVLAISTNDALG---LNAVNLMRLLNTKNIYFVPFG 151 (188) T ss_pred --CCCCCEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCC---HHHHHHHHHHHHCCEEEECCC T ss_conf --975336887788621389984215897778877877517897898750345011---328999999751483310477 Q ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCE Q ss_conf 12553103223334345589999999863101320017977 Q gi|254780622|r 154 SGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKR 194 (405) Q Consensus 154 ~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~ 194 (405) = |. -.--|..+++.+.++|...-..-|+|+- T Consensus 152 Q-------D~---P~~KPnSl~A~~~h~L~~ti~~Al~G~Q 182 (188) T TIGR02852 152 Q-------DD---PFKKPNSLVAKLDHYLIPTIEEALQGRQ 182 (188) T ss_pred C-------CC---CCCCCCCCHHCHHHCCHHHHHHHHCCCC T ss_conf 7-------78---7764850001223014789999962796 No 20 >TIGR02700 flavo_MJ0208 archaeoflavoprotein, MJ0208 family; InterPro: IPR014073 This entry describes one of two paralogous families of archaeal flavoprotein. The other, described by IPR014072 from INTERPRO and typified by the partially characterised AF1518 of ArchaArchaeoglobus fulgidus, is a homodimeric FMN-containing flavoprotein that accepts electrons from ferredoxin and can transfer them to various oxidoreductases. The function of this protein family is unknown.. Probab=99.70 E-value=6.8e-17 Score=128.52 Aligned_cols=117 Identities=29% Similarity=0.472 Sum_probs=92.2 Q ss_pred EEEEEEECHHH-HHHHHHHHHHHHHC--CCEEEEEECHHHHHHCCHH----HHHHHHCCCCCCCCCC-CCCCCCCCCC-- Q ss_conf 69999528478-99999999999987--9889998585686306989----9999747975820767-8877877430-- Q gi|254780622|r 7 KIALIMCGSVA-VYKSLDLIRRLRER--GAVVIPVMTKSAQKFITPL----IVGAISNRRVYTHLLS-YKEGYESNHI-- 76 (405) Q Consensus 7 ~IllgvtGsia-a~k~~~l~~~L~~~--g~~V~vv~T~~A~~fi~~~----~l~~lt~~~v~~~~~~-~~~~~~~~Hi-- 76 (405) ||.+||||.-- -.++..++.+|++. .+.|...+|++|++.|.-- -|..+|+-.-|.|++- .+++.++|-| T Consensus 1 rI~WgITGAgHlL~esfqvmKelk~~~~el~v~t~vSrAgEEVvrMyGL~~~L~~Is~G~yyeE~f~esE~g~SsPi~GR 80 (237) T TIGR02700 1 RIAWGITGAGHLLDESFQVMKELKRRIEELKVSTYVSRAGEEVVRMYGLFDELVEISNGDYYEEVFLESEEGASSPIVGR 80 (237) T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCC T ss_conf 90331033567788899999998630866346631001322335411311566621589600201010478888971012 Q ss_pred -CCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHH--CCCCCEEEECC Q ss_conf -0114465578841118889885202455214666752--27996898405 Q gi|254780622|r 77 -QLANECDLLVVAPASANFIAHVAHGMVYDLASAILLA--KGDQPVLIAPA 124 (405) Q Consensus 77 -~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la--~~~~pi~iaPa 124 (405) .|.+ .|+++|.|||+||+||+||||||+|+|+.+.- .+..|++|+|. T Consensus 81 faLgk-YD~LivsPAT~NTVaKia~GIADsLVTNAvaQAgKG~Vpv~vVPv 130 (237) T TIGR02700 81 FALGK-YDLLIVSPATANTVAKIAYGIADSLVTNAVAQAGKGDVPVLVVPV 130 (237) T ss_pred CCCCC-CCEEEECCCCCCCHHHEEECCHHHHHHHHHHHCCCCCCCEEEEEE T ss_conf 32453-265787585102001100021003567677522377543588875 No 21 >TIGR02699 archaeo_AfpA archaeoflavoprotein AfpA; InterPro: IPR014072 The prototypical member of this archaeal protein family is AF1518 from Archaeoglobus fulgidus. This homodimer with two non-covalently bound FMN cofactors can receive electrons from ferredoxin, but not from a number of other electron donors such as NADH or rubredoxin. It can then donate electrons to various reductases.. Probab=99.65 E-value=2.9e-16 Score=124.49 Aligned_cols=143 Identities=21% Similarity=0.359 Sum_probs=102.5 Q ss_pred EEEEEEECHHH-HHHHHHHHHHHHHC-CC--EEEEEECHHHHHHCCHHH-HHHHHCC--CCCCCCCCCCCCCCCCCCCCC Q ss_conf 69999528478-99999999999987-98--899985856863069899-9997479--758207678877877430011 Q gi|254780622|r 7 KIALIMCGSVA-VYKSLDLIRRLRER-GA--VVIPVMTKSAQKFITPLI-VGAISNR--RVYTHLLSYKEGYESNHIQLA 79 (405) Q Consensus 7 ~IllgvtGsia-a~k~~~l~~~L~~~-g~--~V~vv~T~~A~~fi~~~~-l~~lt~~--~v~~~~~~~~~~~~~~Hi~l~ 79 (405) ||.+|||||-- -.++.+++..+++. |. +|.|.+|+++...+.-.- +..|..+ .++.|. +.+.+.-.+.++++ T Consensus 1 ~iAWGITGsGd~L~Et~~im~~vK~~y~~rV~~~vfLSK~G~~VvKyY~L~~~L~~~F~~~~Ve~-~ANsPFLaG~lQ~G 79 (176) T TIGR02699 1 RIAWGITGSGDKLPETVEIMKDVKKKYGDRVEIDVFLSKAGEQVVKYYKLWDKLEEDFDDLRVEI-NANSPFLAGQLQLG 79 (176) T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHCCCEEEEE-CCCCCCCCCCCCCC T ss_conf 90342028998416788888997520598789999860586745316676788863106405870-78678100641346 Q ss_pred CCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHH--CCCCCEEEECCCCCH------HHHH--------HHHHHHHHHHH Q ss_conf 4465578841118889885202455214666752--279968984056600------0003--------88999999986 Q gi|254780622|r 80 NECDLLVVAPASANFIAHVAHGMVYDLASAILLA--KGDQPVLIAPAMNFM------MWAK--------PATQRNVEILQ 143 (405) Q Consensus 80 ~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la--~~~~pi~iaPaMn~~------M~~~--------p~~~~nl~~L~ 143 (405) + .|.+|||||||||.||||.||||+|+|+.+.+ .+..||.|.|+=+.. .-++ -.=.+|+++|+ T Consensus 80 ~-YdflLvAPATaNtvAKI~~GIADtLvtNAv~~a~KA~vPvYI~P~D~k~G~V~T~lP~gk~L~L~~r~~DVe~v~kL~ 158 (176) T TIGR02699 80 K-YDFLLVAPATANTVAKIAYGIADTLVTNAVIQALKAKVPVYIMPSDYKEGTVKTALPDGKKLELRMRKVDVENVEKLA 158 (176) T ss_pred E-EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEEEECHHHHHHHH T ss_conf 0-110221554210156444303337899999963168744686278898325898569896168987641202468876 Q ss_pred H-HCCCCCC Q ss_conf 4-0001346 Q gi|254780622|r 144 K-DGCYFIG 151 (405) Q Consensus 144 ~-~g~~vi~ 151 (405) + +|+.|++ T Consensus 159 ~Me~i~vL~ 167 (176) T TIGR02699 159 QMEGIEVLE 167 (176) T ss_pred HHCCCCCCC T ss_conf 515711037 No 22 >COG1036 Archaeal flavoproteins [Energy production and conversion] Probab=99.57 E-value=1.6e-14 Score=113.20 Aligned_cols=143 Identities=23% Similarity=0.345 Sum_probs=96.1 Q ss_pred CCCEEEEEEECHHH-HHHHHHHHHHHHHC--CCEEEEEECHHHHHHCCHH----HHHHHHCCCCCCCCCCCCCCCCCCCC Q ss_conf 85569999528478-99999999999987--9889998585686306989----99997479758207678877877430 Q gi|254780622|r 4 SGKKIALIMCGSVA-VYKSLDLIRRLRER--GAVVIPVMTKSAQKFITPL----IVGAISNRRVYTHLLSYKEGYESNHI 76 (405) Q Consensus 4 ~~k~IllgvtGsia-a~k~~~l~~~L~~~--g~~V~vv~T~~A~~fi~~~----~l~~lt~~~v~~~~~~~~~~~~~~Hi 76 (405) .++||.+|+||+-- -.++.+++.++++. +++|.+.+|+++++.+.-. .++..++. +..|. +.+.+.-...+ T Consensus 7 ~~~rIaWgITGaG~~L~Et~~imk~lk~~~~~~~v~v~lSkageeVvk~YgL~~~l~~~~~~-~~~e~-~ansPfi~Grl 84 (187) T COG1036 7 KKKRIAWGITGAGHLLPETYQIMKELKKEYGDVEVDVFLSKAGEEVVKMYGLWDKLEKIFGG-LEVEI-GANSPFIAGRL 84 (187) T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCC-EEEEC-CCCCCCEECCE T ss_conf 36158999705530109999999999864588058876223089999999899999987598-67643-89997453110 Q ss_pred CCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHH-H-CCCCCEEEECCCCCH--------------HHHHHHHHHHHH Q ss_conf 011446557884111888988520245521466675-2-279968984056600--------------000388999999 Q gi|254780622|r 77 QLANECDLLVVAPASANFIAHVAHGMVYDLASAILL-A-KGDQPVLIAPAMNFM--------------MWAKPATQRNVE 140 (405) Q Consensus 77 ~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~l-a-~~~~pi~iaPaMn~~--------------M~~~p~~~~nl~ 140 (405) ++.+ .|+++|+|||+||.||+|+||||+|+|+.+. | .+..|+.++|.=... |.-...-.+|.+ T Consensus 85 qlGk-YD~llvaPaTsNTvAKIa~GIADtLVTNAVaqa~Kg~VPvyivP~D~k~G~V~t~~~gGk~~el~vR~vDvenv~ 163 (187) T COG1036 85 QLGK-YDFLLVAPATSNTVAKIAYGIADTLVTNAVAQAGKGKVPVYIVPVDYKEGTVETTLPGGKKLELRVRKVDVENVE 163 (187) T ss_pred ECCC-CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCEEEEEEEECCHHHHH T ss_conf 0253-017998246563189998655789999999996078986899345565775887279995789998622167799 Q ss_pred HHHHH-CCCC Q ss_conf 98640-0013 Q gi|254780622|r 141 ILQKD-GCYF 149 (405) Q Consensus 141 ~L~~~-g~~v 149 (405) +|+.. |+.| T Consensus 164 kl~~megi~V 173 (187) T COG1036 164 KLAQMEGIEV 173 (187) T ss_pred HHHHCCCEEE T ss_conf 9984269088 No 23 >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=97.72 E-value=0.00021 Score=48.19 Aligned_cols=108 Identities=19% Similarity=0.204 Sum_probs=70.8 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHC Q ss_conf 01797789840420101021357621577278899999998258838998415667765674675465778999999850 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKA 268 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~ 268 (405) +|+||.+|||+|. +=.|.++|+.|...||+|..+.-.........+..+...-.++..+++.+. T Consensus 2 dl~gK~alVTGas----------------~GIG~aia~~~a~~Ga~V~~~d~~~~~~~~~~~~~~~~Dv~~~~v~~~~~~ 65 (237) T PRK06550 2 EFMTKTVLVTGAA----------------SGIGLAQARAFLEQGAHVYGVDKSDKPDLSGNFHFIQLDLSSDKLEPLFKV 65 (237) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCEEEEECCCCHHHHHHHHHH T ss_conf 9899899993747----------------799999999999879999997086124306973899863888999999997 Q ss_pred C-CCCEEEEEHHHHH-HHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH Q ss_conf 5-8887997404444-4322221011233455775104552180689887 Q gi|254780622|r 269 L-PVDIAVMVSAVSD-WRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII 316 (405) Q Consensus 269 ~-~~D~~I~aAAVSD-f~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i 316 (405) + ..|++|.+|.+.+ +.|-. + +.-+.....+.+.|.-.--+.+.+ T Consensus 66 ~g~iDiLvNnAGi~~~~~~~~--~--~~~e~w~~~~~vNl~~~~~~~~~~ 111 (237) T PRK06550 66 VPSVDILCNTAGILDDYKPLL--D--TSDEEWQHIFDINLFSTFLLTRAY 111 (237) T ss_pred CCCCCEEEECCCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 599979998988899999905--5--999999999999729999999999 No 24 >PRK07577 short chain dehydrogenase; Provisional Probab=97.71 E-value=0.00023 Score=47.82 Aligned_cols=81 Identities=22% Similarity=0.217 Sum_probs=59.3 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCE---EEEEHHHHHHHHHHHH Q ss_conf 1797789840420101021357621577278899999998258838998415667765674---6754657789999998 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNV---MTIHVERAEDMLQEVL 266 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~---~~i~v~t~~em~~~~~ 266 (405) |+||.+|||+|+ +-.|.++|+.|...||+|..+.-......+..+ .+-.....+++.+.+. T Consensus 1 L~~K~alITGas----------------~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~~~ 64 (234) T PRK07577 1 MSSRTVLVTGAT----------------KGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQIN 64 (234) T ss_pred CCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHH T ss_conf 941989993778----------------8899999999998799999963475447897699995799999999999999 Q ss_pred HCCCCCEEEEEHHHHHHHHH Q ss_conf 50588879974044444322 Q gi|254780622|r 267 KALPVDIAVMVSAVSDWRFP 286 (405) Q Consensus 267 ~~~~~D~~I~aAAVSDf~~~ 286 (405) +..+.|++|.+|++..+.+- T Consensus 65 ~~~~id~LVnnAG~~~~~~~ 84 (234) T PRK07577 65 EIHPVDAIVNNVGIALPQPL 84 (234) T ss_pred HHCCCCEEEECCCCCCCCCH T ss_conf 76999899989988999880 No 25 >PRK07856 short chain dehydrogenase; Provisional Probab=97.69 E-value=0.00031 Score=47.07 Aligned_cols=107 Identities=17% Similarity=0.210 Sum_probs=66.5 Q ss_pred CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-CCCCEEEE-----EHHHHHH Q ss_conf 20017977898404201010213576215772788999999982588389984156677-65674675-----4657789 Q gi|254780622|r 187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA-DPPNVMTI-----HVERAED 260 (405) Q Consensus 187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-~~~~~~~i-----~v~t~~e 260 (405) +.+|+||.+|||+|. +-.|.++|+.+...||+|.+.. ....+ .....+.+ .-+..++ T Consensus 3 ~~~l~~K~alITGgs----------------~GIG~aia~~la~~Ga~V~i~~-r~~~~~~~~~~~~~~~Dv~~~~~v~~ 65 (254) T PRK07856 3 NLDLTGRVVLVTGGT----------------RGVGAGISEAFLAAGATVVVCG-RRAPEVDGRPAEFHACDIRDPDQVAA 65 (254) T ss_pred CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEE-CCHHHCCCCCEEEEECCCCCHHHHHH T ss_conf 423599989994767----------------6899999999998799999997-98557489843999846999999999 Q ss_pred HHHHHHHCCC-CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH Q ss_conf 9999985058-88799740444443222210112334557751045521806898 Q gi|254780622|r 261 MLQEVLKALP-VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK 314 (405) Q Consensus 261 m~~~~~~~~~-~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~ 314 (405) +.+++.+.+. .|++|..|.+.-+.+.... .-+.....+.+.|.-.--+.+ T Consensus 66 ~~~~~~~~~g~iDilVnNAG~~~~~~~~~~----~~~~~~~~~~vNl~~~~~l~q 116 (254) T PRK07856 66 LVDAIAERHGRLDVLVNNAGGSPYALAAEA----SPRFHEKIVELNLLAPLLVAQ 116 (254) T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCHHHC----CHHHHHHHHHHHHHHHHHHHH T ss_conf 999999980998889988988999881349----999999999998289999999 No 26 >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=97.61 E-value=0.00024 Score=47.70 Aligned_cols=184 Identities=20% Similarity=0.263 Sum_probs=94.6 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC---------C-CCCCEEEE----- Q ss_conf 01797789840420101021357621577278899999998258838998415667---------7-65674675----- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI---------A-DPPNVMTI----- 253 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~---------~-~~~~~~~i----- 253 (405) +|+||.||||+| |+-+|.++|+.+..+|++|.+....... . ....+..+ T Consensus 2 ~L~gK~vlITGg----------------s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~ 65 (247) T PRK05565 2 KLMGKVAIVTGA----------------SGGIGRAIAELLAKEGAKVVIAYDKNEEAANELLEEIKEVGGDAIAVKADVS 65 (247) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 989988999378----------------4589999999999879989998179989999999999963990899983589 Q ss_pred EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHH----HHHHHCCCCCCEEEE Q ss_conf 4657789999998505-88879974044444322221011233455775104552180689----887621489958999 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDIL----KIIGHHQCRPSIVVG 328 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL----~~i~~~k~~~~~lVG 328 (405) +.++.+++.+.+.+.+ +.|++|.+|++..+.+-. +. .-+...+.+.+.|.-.--+. ..+.+++ ...+|- T Consensus 66 ~~~~~~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~--~~--~~~~~~~~~~~Nl~~~~~~~~~~~~~m~~~~--~G~II~ 139 (247) T PRK05565 66 SEDDVENLVEQIVEKFGKIDILVNNAGISKFGLVT--DM--TDEEWDRVINVNLTGVMRLTRYALPIMIKRG--SGVIVN 139 (247) T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEEE T ss_conf 99999999999999809984999899878999915--59--9999999999854789999998579887569--975999 Q ss_pred EE---CCC---CH---------HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCC---CE-EECC---CCC Q ss_conf 81---141---23---------899999999974998999920577677777661189998369---85-9727---899 Q gi|254780622|r 329 FA---AET---QC---------IEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPD---KI-EEYP---ELP 386 (405) Q Consensus 329 Fk---aET---~~---------l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~---~~-~~~~---~~s 386 (405) +. +.. +. ++.-++.-..+-+-+=|-.|.|.++ ++.++..+. +... .. ...| ..+ T Consensus 140 isS~~~~~~~~~~~~Y~asKaal~~ltr~lA~e~~~~gIrvN~V~PG--~~~T~~~~~--~~~~~~~~~~~~~p~~R~~~ 215 (247) T PRK05565 140 ISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAIAPG--AIETEMNSS--FSEEDKEGLAEEIPLGRLGE 215 (247) T ss_pred ECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEC--CCCCCCCCC--CCHHHHHHHHHCCCCCCCCC T ss_conf 73512257899833889999999999999999954309499999609--895742100--49778999985599889939 Q ss_pred HHHHHHHHHHHH Q ss_conf 899999999999 Q gi|254780622|r 387 KAEVADRLCHLI 398 (405) Q Consensus 387 K~~iA~~Il~~i 398 (405) ..|+|+-+.-.+ T Consensus 216 p~dva~~v~fL~ 227 (247) T PRK05565 216 PEEIAKVVLFLA 227 (247) T ss_pred HHHHHHHHHHHH T ss_conf 999999999996 No 27 >PRK06523 short chain dehydrogenase; Provisional Probab=97.60 E-value=0.00064 Score=45.01 Aligned_cols=154 Identities=21% Similarity=0.244 Sum_probs=83.2 Q ss_pred CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEH-----HHHHHH Q ss_conf 200179778984042010102135762157727889999999825883899841566776567467546-----577899 Q gi|254780622|r 187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHV-----ERAEDM 261 (405) Q Consensus 187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v-----~t~~em 261 (405) +.+|+||.+|||+| |+-+|.++|+.|...||+|....-.........+..+.+ ...+++ T Consensus 4 ~l~L~gK~alITG~----------------s~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~Dv~~~~~v~~~ 67 (260) T PRK06523 4 DLELAGKRALVTGG----------------TKGIGAATVARFREAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAV 67 (260) T ss_pred CCCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHH T ss_conf 73899998999475----------------76999999999998799999994884013798628998379999999999 Q ss_pred HHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCCEEEEEE---CC- Q ss_conf 99998505-888799740444443222210112334557751045521806----8988762148995899981---14- Q gi|254780622|r 262 LQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPSIVVGFA---AE- 332 (405) Q Consensus 262 ~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~~lVGFk---aE- 332 (405) .+++.+.+ ..|++|..|.++-..+... .++.-+++...+.+.|.-.-- ++..+.+++. .-+|-+. +. T Consensus 68 v~~~~~~~g~iDiLVnNAG~~~~~~~~~--~~~~~~~w~~~~~~Nl~~~~~~~q~~~p~m~~~~~--G~IinisS~~~~~ 143 (260) T PRK06523 68 ARAVLERLGGVDILVHVLGGSSAPAGGF--AALTDEEWQDELNLNLLAAVRLDRALLPAMIARGS--GVIIHVTSIQRRL 143 (260) T ss_pred HHHHHHHCCCCCEEEECCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCEEEEEEHHHCC T ss_conf 9999997499979998998876799880--31999999999999849999999999999998399--8669995522146 Q ss_pred --CCHHHHH----------HHHHHHHCCCCEEEEECCCCC Q ss_conf --1238999----------999999749989999205776 Q gi|254780622|r 333 --TQCIEQN----------AREKLLNKGADFIVSNCILPD 360 (405) Q Consensus 333 --T~~l~~~----------A~~Kl~~K~~D~IVAN~i~~~ 360 (405) .+....+ .+.--.+-+-+=|-.|.|.++ T Consensus 144 ~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrvN~V~PG 183 (260) T PRK06523 144 PLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNRVSPG 183 (260) T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEC T ss_conf 8886508899999999999999999973439299999648 No 28 >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=97.60 E-value=0.00049 Score=45.77 Aligned_cols=112 Identities=21% Similarity=0.212 Sum_probs=68.2 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC----------CCCCCEEEE----- Q ss_conf 01797789840420101021357621577278899999998258838998415667----------765674675----- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI----------ADPPNVMTI----- 253 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~----------~~~~~~~~i----- 253 (405) .|+||.++||+| |+-.|.++|+++...|++|.+....... .....+..+ T Consensus 4 ~LkgK~~lITGa----------------s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 67 (250) T PRK12825 4 SLSGRVALVTGA----------------ARGIGRAIALRLAAAGADVIVHPPSDEAAAEETVAAVEALGRRAQAVQADVT 67 (250) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECC T ss_conf 609788999389----------------5589999999999879989999798878999999999853994899994189 Q ss_pred EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCC Q ss_conf 4657789999998505-888799740444443222210112334557751045521806----898876214 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQ 320 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k 320 (405) +.++.+++.+.+.+.+ +.|++|.+|++..+.+- .+ +.-.+..+.+.+.+.-.-- ++..+.+++ T Consensus 68 ~~~~~~~~~~~~~~~~g~iDilInnAg~~~~~~~--~~--~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~ 135 (250) T PRK12825 68 DAAALEAAVEELVERFGAIDILVNNAGITGDGRL--WE--MSDDEWERVIDVNLTGVFNVLRAVVPPMIEAG 135 (250) T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCH--HH--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 9999999999999976999899989988999890--23--99999999999851899999999899999749 No 29 >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed Probab=97.58 E-value=0.00023 Score=47.88 Aligned_cols=122 Identities=18% Similarity=0.156 Sum_probs=71.1 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C--------CCCCCEEEE----- Q ss_conf 00179778984042010102135762157727889999999825883899841566-7--------765674675----- Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I--------ADPPNVMTI----- 253 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~--------~~~~~~~~i----- 253 (405) .+|+||.+|||+| |+-.|.++|+++...|++|.+..-... . .....+..+ T Consensus 2 ~~L~gK~alITGg----------------s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dl~ 65 (253) T PRK12826 2 RDLMGRVALVTGA----------------ARGIGRAIAVRFAADGADVIVVDICGQAAAATAELVAAAGGKARAYQVDVR 65 (253) T ss_pred CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEECC T ss_conf 9889988999489----------------778999999999987998999989889999999999850995899995179 Q ss_pred EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC----HHHHHHHHHCCCCCCEEEE Q ss_conf 4657789999998505-8887997404444432222101123345577510455218----0689887621489958999 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN----PDILKIIGHHQCRPSIVVG 328 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~----pdIL~~i~~~k~~~~~lVG 328 (405) .-+..+++.+.+.+.+ ..|++|.+|++....+-. + +.-++....+.+.|... .-.+..+.+++....+.|+ T Consensus 66 ~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~--~--~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~is 141 (253) T PRK12826 66 DRAALKALVAAGVERFGRLDILVANAGIFPLTPFA--E--LDDEDWDRVIDVNLTGTFLLTQAALPALKRAGGGRIVLTS 141 (253) T ss_pred CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE T ss_conf 99999999999999839987899899889999815--5--9999999999987566643378746999976997699995 Q ss_pred E Q ss_conf 8 Q gi|254780622|r 329 F 329 (405) Q Consensus 329 F 329 (405) - T Consensus 142 S 142 (253) T PRK12826 142 S 142 (253) T ss_pred C T ss_conf 2 No 30 >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional Probab=97.55 E-value=0.00074 Score=44.59 Aligned_cols=78 Identities=21% Similarity=0.208 Sum_probs=56.5 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEE-----HHHHHHHHH Q ss_conf 017977898404201010213576215772788999999982588389984156677656746754-----657789999 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIH-----VERAEDMLQ 263 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~-----v~t~~em~~ 263 (405) +|+||.+|||+|. +=.|.++|+.|...||+|.+..-.........+..+. -+..+++.+ T Consensus 6 ~L~gKvalVTGgs----------------~GIG~aia~~la~~Ga~V~~~d~~~~~~~~~~~~~~~~Dvt~~~~v~~~v~ 69 (266) T PRK06171 6 NLQGKIIIVTGGS----------------SGIGLAIVEELLAQGANVQMVDIHGGDEKHKGYQFWPTDISSAKEVNHTVA 69 (266) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCEEEEECCCCCHHHHHHHHH T ss_conf 8999979994778----------------789999999999879999999788535058976999816999999999999 Q ss_pred HHHHCC-CCCEEEEEHHHHH Q ss_conf 998505-8887997404444 Q gi|254780622|r 264 EVLKAL-PVDIAVMVSAVSD 282 (405) Q Consensus 264 ~~~~~~-~~D~~I~aAAVSD 282 (405) ++.+.+ ..|++|.+|.+.- T Consensus 70 ~~~~~~G~iDiLVNNAGi~~ 89 (266) T PRK06171 70 EIIERFGRIDGLVNNAGINF 89 (266) T ss_pred HHHHHHCCCCEEEECCCCCC T ss_conf 99998399889998886676 No 31 >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional Probab=97.53 E-value=0.00022 Score=48.05 Aligned_cols=37 Identities=30% Similarity=0.366 Sum_probs=19.9 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 001797789840420101021357621577278899999998258838998 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI 238 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li 238 (405) ..|+||++|||+++ ||--.|++||+.|...||+|.+. T Consensus 6 g~L~GK~alITGaa--------------g~~GIG~aiA~~la~~GA~V~i~ 42 (272) T PRK08159 6 GLMQGKRGLILGVA--------------NNRSIAWGIAKACRAAGAELAFT 42 (272) T ss_pred CCCCCCEEEEECCC--------------CCCHHHHHHHHHHHHCCCEEEEE T ss_conf 23589999998899--------------98689999999999869999997 No 32 >PRK07201 short chain dehydrogenase; Provisional Probab=97.53 E-value=0.0004 Score=46.31 Aligned_cols=185 Identities=23% Similarity=0.263 Sum_probs=100.9 Q ss_pred CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC------CC-C--CCEE-----E Q ss_conf 2001797789840420101021357621577278899999998258838998415667------76-5--6746-----7 Q gi|254780622|r 187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI------AD-P--PNVM-----T 252 (405) Q Consensus 187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~------~~-~--~~~~-----~ 252 (405) +.+|+||.+|||+| ||| .|.++|+.+.++||.|.++.-.... +. . ..+. + T Consensus 371 ~g~L~GKvalITGA---------------SSG-IG~A~A~~LA~~GA~Vvl~AR~~e~Le~v~~ei~~~Gg~a~~~~~DV 434 (663) T PRK07201 371 RGPLEGKHVIITGA---------------SSG-IGRATAIKVAEAGATVFALARDGEKLDELVAEIRARGGQAHAYTCDL 434 (663) T ss_pred CCCCCCCEEEECCC---------------CCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECC T ss_conf 88879947999388---------------759-99999999998799899998999999999999995599189999627 Q ss_pred EEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH----HHHHHHHHCCCCCCEEE Q ss_conf 54657789999998505-88879974044444322221011233455775104552180----68988762148995899 Q gi|254780622|r 253 IHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP----DILKIIGHHQCRPSIVV 327 (405) Q Consensus 253 i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p----dIL~~i~~~k~~~~~lV 327 (405) -..+..+.+.+++.+.+ ..|++|.+|.++-+++..-...++ .+....+.+.+.-.- -++..+.+++ . .-+| T Consensus 435 td~~~v~~lv~~i~~~~G~IDVLVNNAG~si~~~~~~~~d~~--~d~er~m~vN~~G~v~l~~a~lP~M~~r~-~-G~IV 510 (663) T PRK07201 435 TDSASVEHTVKDILGRHGHVDYLVNNAGRSIRRSVVNSTDRF--HDYERTMQLNYFGAVRLVLGLLPHMRERR-F-GHVV 510 (663) T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C-EEEE T ss_conf 999999999999999679988899896446757501134549--99999999974999999999999888539-9-3999 Q ss_pred EEE---CCC---------------CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCE-EECCCCCHH Q ss_conf 981---141---------------2389999999997499899992057767777766118999836985-972789989 Q gi|254780622|r 328 GFA---AET---------------QCIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKI-EEYPELPKA 388 (405) Q Consensus 328 GFk---aET---------------~~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~-~~~~~~sK~ 388 (405) --+ ... +..-+.+..-+..+| |-.|.|... ..-. -+|.+... ...|.++-+ T Consensus 511 NISSiag~~~~P~~saYsASKaAl~aftr~La~Ela~~G---VrVttI~PG--~V~T-----pMiapt~~y~~~p~l~pe 580 (663) T PRK07201 511 NISSIGVQTNAPRFSAYVASKAALDAFARVAASETLSDG---ITFTNIHMP--LVRT-----PMIAPTKRYNPVPTLSPE 580 (663) T ss_pred EECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---EEEEEECCC--CCCC-----CCCCCCCCCCCCCCCCHH T ss_conf 975565477899864999999999999999999837578---289997159--7178-----877875222789989999 Q ss_pred HHHHHHHHHHHHH Q ss_conf 9999999999998 Q gi|254780622|r 389 EVADRLCHLIVEH 401 (405) Q Consensus 389 ~iA~~Il~~i~~~ 401 (405) ++|..|++.|+++ T Consensus 581 ~aA~~i~~a~~~~ 593 (663) T PRK07201 581 EAADMVARALVEK 593 (663) T ss_pred HHHHHHHHHHHCC T ss_conf 9999999998518 No 33 >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional Probab=97.51 E-value=0.00017 Score=48.65 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=20.8 Q ss_pred CC--CCCCEEEE-EEEC--HHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 98--88556999-9528--478999999999999879889998 Q gi|254780622|r 1 MD--LSGKKIAL-IMCG--SVAVYKSLDLIRRLRERGAVVIPV 38 (405) Q Consensus 1 m~--l~~k~Ill-gvtG--siaa~k~~~l~~~L~~~g~~V~vv 38 (405) |+ |+||++|+ |.+| +|. ..+++.|.++|++|.+. T Consensus 1 M~g~L~GK~alITGaa~~~GIG----~aiA~~La~~GA~V~i~ 39 (271) T PRK06505 1 MEGLMQGKRGLIMGVANDHSIA----WGIAKQLAAQGAELAFT 39 (271) T ss_pred CCCCCCCCEEEEECCCCCCHHH----HHHHHHHHHCCCEEEEE T ss_conf 9875799979997999985499----99999999869999998 No 34 >PRK06398 aldose dehydrogenase; Validated Probab=97.51 E-value=0.00053 Score=45.52 Aligned_cols=120 Identities=18% Similarity=0.188 Sum_probs=72.2 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEE-----EHHHHHHHH Q ss_conf 001797789840420101021357621577278899999998258838998415667765674675-----465778999 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTI-----HVERAEDML 262 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i-----~v~t~~em~ 262 (405) .+|+||.+|||+| |+-.|.++|+.|...||+|..+.-.. .........+ .-+..+++. T Consensus 2 ~~L~gKvalVTGg----------------s~GIG~aia~~la~~Ga~V~~~~~~~-~~~~~~~~~i~~Dvt~~~~v~~~v 64 (256) T PRK06398 2 RDLRDKVVIVTGG----------------SSGIGLAIVSRFVDEGSKVVSISRSE-PEDINKSDHIKCDVTNEDEVKNAI 64 (256) T ss_pred CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCC-CCCCCCCCEEEECCCCHHHHHHHH T ss_conf 8999898999687----------------87899999999998699999994875-125172238985479999999999 Q ss_pred HHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHH----HHHHHCCCCCCEEEEEE Q ss_conf 9998505-88879974044444322221011233455775104552180689----88762148995899981 Q gi|254780622|r 263 QEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDIL----KIIGHHQCRPSIVVGFA 330 (405) Q Consensus 263 ~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL----~~i~~~k~~~~~lVGFk 330 (405) +++.+.+ ..|++|.+|.+..+.+-. .+.-..+...+.+.|.-.--.. ..+.++ ...-+|-+. T Consensus 65 ~~~~~~~G~iDiLVNNAG~~~~~~~~----~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--~~G~IVnis 131 (256) T PRK06398 65 NEISKKYGRIDVLVNNAGIEKYGSLH----KTDSGTWRRIIDVNVNGVYYMSKEVIPHMLRS--GTGSIVNIS 131 (256) T ss_pred HHHHHHCCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEEEE T ss_conf 99999839997999899999999904----49999999999997362899999999999983--995799980 No 35 >PRK08945 short chain dehydrogenase; Provisional Probab=97.50 E-value=0.00049 Score=45.75 Aligned_cols=84 Identities=24% Similarity=0.322 Sum_probs=55.9 Q ss_pred HCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-------C--CCCCEEE Q ss_conf 1013200179778984042010102135762157727889999999825883899841566-7-------7--6567467 Q gi|254780622|r 183 YKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-------A--DPPNVMT 252 (405) Q Consensus 183 ~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-------~--~~~~~~~ 252 (405) ++.++..|+||.+|||+|. +-.|.++|+.+...|++|.++.-... + . ..+...+ T Consensus 4 ~~p~~~~L~gK~~lITGas----------------~GIG~aiA~~la~~Ga~Vil~~r~~~~l~~~~~el~~~~~~~~~~ 67 (245) T PRK08945 4 YQPKPDLLKDRIILVTGAG----------------DGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAI 67 (245) T ss_pred CCCCCCCCCCCEEEEECCC----------------HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEE T ss_conf 9999867897989994886----------------189999999999879989999698899999999999747984489 Q ss_pred E--EH-----HHHHHHHHHHHHCC-CCCEEEEEHHHHH Q ss_conf 5--46-----57789999998505-8887997404444 Q gi|254780622|r 253 I--HV-----ERAEDMLQEVLKAL-PVDIAVMVSAVSD 282 (405) Q Consensus 253 i--~v-----~t~~em~~~~~~~~-~~D~~I~aAAVSD 282 (405) + .+ ...+++.+.+.+.+ ..|++|.+|++.. T Consensus 68 ~~~d~~~~~~~~~~~~~~~i~~~~g~iD~lVnNAG~~~ 105 (245) T PRK08945 68 IPLDLLGATEQNYQDLADTIEEQFGRLDGVLHNAGLLG 105 (245) T ss_pred EEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC T ss_conf 99446759999999999999998099879998887557 No 36 >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated Probab=97.48 E-value=0.00059 Score=45.24 Aligned_cols=108 Identities=20% Similarity=0.251 Sum_probs=68.5 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C--------CCCCCEE-----EEE Q ss_conf 0179778984042010102135762157727889999999825883899841566-7--------7656746-----754 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I--------ADPPNVM-----TIH 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~--------~~~~~~~-----~i~ 254 (405) .|+||.++||+| ||-.|.++|+.+...|++|.++.-... + .....+. +-. T Consensus 2 ~L~~Kv~lITGg----------------s~GIG~a~a~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dl~~ 65 (246) T PRK05653 2 SLQGKTALVTGA----------------SRGIGRAIALRLAADGARVVIYDSNEEAAEALAEELRAAGGEAALLVFDVTD 65 (246) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCC T ss_conf 989988999389----------------7589999999999879999999799999999999999659948999972899 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH Q ss_conf 657789999998505-88879974044444322221011233455775104552180689887 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII 316 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i 316 (405) .++.+++.+.+.+.+ +.|++|.+|++....+-. + +..++..+.+.+.|.-.-.+.+.+ T Consensus 66 ~~~~~~~~~~~~~~~g~iDilvnnAg~~~~~~~~--~--~~~~~~~~~~~vNl~~~~~~~~~~ 124 (246) T PRK05653 66 EAAVRALIEAAVERFGGLDVLVNNAGITRDALLP--R--MSEEDWDRVIDTNLTGTFNVCRAA 124 (246) T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH--H--CCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999749986999899999998801--3--999999999998608899999999 No 37 >PRK06500 short chain dehydrogenase; Provisional Probab=97.42 E-value=0.00069 Score=44.79 Aligned_cols=81 Identities=23% Similarity=0.286 Sum_probs=58.2 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC------CCCCCCCEEEE-----EHHH Q ss_conf 017977898404201010213576215772788999999982588389984156------67765674675-----4657 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV------SIADPPNVMTI-----HVER 257 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~------~~~~~~~~~~i-----~v~t 257 (405) .|+||.++||+|. +=+|.++|+.|...||+|.+..-.. ..+....+..+ ..++ T Consensus 3 rl~gK~~lITGas----------------~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~~~~~~Dv~~~~~ 66 (249) T PRK06500 3 RLQGKTALITGGT----------------SGIGLETARQFAAEGARVAITGRDAATLEAARAELGEDALVIRNDAGSVAA 66 (249) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCHHH T ss_conf 9899889993768----------------789999999999879999999699899999999858975999951799999 Q ss_pred HHHHHHHHHHCCC-CCEEEEEHHHHHHHH Q ss_conf 7899999985058-887997404444432 Q gi|254780622|r 258 AEDMLQEVLKALP-VDIAVMVSAVSDWRF 285 (405) Q Consensus 258 ~~em~~~~~~~~~-~D~~I~aAAVSDf~~ 285 (405) .+++.+.+.+.+. .|++|.+|++..+.+ T Consensus 67 ~~~~~~~~~~~~g~iDiLvnnAG~~~~~~ 95 (249) T PRK06500 67 QRALAQALAEAGGRLDAVFINAGVAKFAP 95 (249) T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCCCC T ss_conf 99999999997699989998998789999 No 38 >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional Probab=97.42 E-value=0.0011 Score=43.47 Aligned_cols=33 Identities=36% Similarity=0.472 Sum_probs=18.5 Q ss_pred CCCCCCEEEE-EEECHHHHHHHHHHHHHHHHCCCEEEE Q ss_conf 9888556999-952847899999999999987988999 Q gi|254780622|r 1 MDLSGKKIAL-IMCGSVAVYKSLDLIRRLRERGAVVIP 37 (405) Q Consensus 1 m~l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g~~V~v 37 (405) |+|+||++|+ |-+++| -..+++.|.+.|++|.. T Consensus 1 ~~L~gK~alVTG~s~GI----G~aia~~la~~GA~V~~ 34 (261) T PRK12428 1 MRLDGKTIVVTGVASGI----GAEVARLLRFLGARVIG 34 (261) T ss_pred CCCCCCEEEEECCCCHH----HHHHHHHHHHCCCEEEE T ss_conf 98999889997857799----99999999986999999 No 39 >PRK12828 short chain dehydrogenase; Provisional Probab=97.41 E-value=0.00082 Score=44.32 Aligned_cols=180 Identities=20% Similarity=0.261 Sum_probs=96.1 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-------CCCCCCEE--EEE---H Q ss_conf 00179778984042010102135762157727889999999825883899841566-------77656746--754---6 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-------IADPPNVM--TIH---V 255 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-------~~~~~~~~--~i~---v 255 (405) ..|+||.+|||+| |+-+|.++|+.|...||+|.+..-... .....+.. ... . T Consensus 3 ~~L~gKvalITGa----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~Dvt~~ 66 (239) T PRK12828 3 HSLQGKVVAITGG----------------FGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP 66 (239) T ss_pred CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCH T ss_conf 9969898999472----------------548999999999987998999979877899999875178856999607999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC----HHHHHHHHHCCCCCCEEEEEE Q ss_conf 57789999998505-8887997404444432222101123345577510455218----068988762148995899981 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN----PDILKIIGHHQCRPSIVVGFA 330 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~----pdIL~~i~~~k~~~~~lVGFk 330 (405) +..+++.+++.+.+ ..|++|.+|.+..+.+-. + +.-++..+.+.+.|.-. .-.+..+.++ ....+|-+. T Consensus 67 ~~~~~~v~~~~~~~G~iDilVnNAG~~~~~~~~--~--~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--~~G~IInis 140 (239) T PRK12828 67 QAARRAVDEVNRQFGRLDALVNIAGAFVWGTIA--D--GDADTWDRMYGVNVKTTLNASKAALPALTAS--GGGRIVNIG 140 (239) T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEEEE T ss_conf 999999999999839997999897789999904--4--9999999999999699999999999999876--998699997 Q ss_pred CC---CC--HHHHH-------------HHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCC-CCHHHHH Q ss_conf 14---12--38999-------------999999749989999205776777776611899983698597278-9989999 Q gi|254780622|r 331 AE---TQ--CIEQN-------------AREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPE-LPKAEVA 391 (405) Q Consensus 331 aE---T~--~l~~~-------------A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~-~sK~~iA 391 (405) -. .. ..-.+ ...-+..+ =|=.|.|.++ ++.++.++-.+. +. .+.+ .+-+++| T Consensus 141 S~~~~~~~~~~~~Y~asKaal~~ltk~lA~e~~~~---gIrVN~V~PG--~v~T~~~~~~~~--~~--~~~r~~~p~diA 211 (239) T PRK12828 141 AGAALKAGPGMGAYAAAKAGVARLTEALAAELLDR---GITVNAVLPS--IIDTPPNRADMP--DA--DFSRWVTPEQIA 211 (239) T ss_pred CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---CEEEEEEEEC--CCCCCCHHCCCC--HH--HCCCCCCHHHHH T ss_conf 77867779996899999999999999999986130---9089999738--788820024185--64--617989999999 Q ss_pred HHHHHHH Q ss_conf 9999999 Q gi|254780622|r 392 DRLCHLI 398 (405) Q Consensus 392 ~~Il~~i 398 (405) .-++-.. T Consensus 212 ~~v~fL~ 218 (239) T PRK12828 212 AVIAFLL 218 (239) T ss_pred HHHHHHH T ss_conf 9999995 No 40 >PRK07831 short chain dehydrogenase; Provisional Probab=97.41 E-value=0.00059 Score=45.26 Aligned_cols=120 Identities=17% Similarity=0.209 Sum_probs=72.8 Q ss_pred CCCCCCCEEEEEECCCHHEECCEEEEECCCCCH-HHHHHHHHHHHCCCCEEEEECCCC----------CCC-CCCEEEE- Q ss_conf 200179778984042010102135762157727-889999999825883899841566----------776-5674675- Q gi|254780622|r 187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQ-QGHAIAKSLAYFGAEVILISGPVS----------IAD-PPNVMTI- 253 (405) Q Consensus 187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk-~G~~iA~~~~~~Ga~V~li~g~~~----------~~~-~~~~~~i- 253 (405) ...|+||++|||+|+ |+ +|.++|+.|.+.||+|.+..-... ... ...+..+ T Consensus 11 ~g~L~gKvalVTGgs----------------g~GIG~a~a~~la~~Ga~V~i~d~~~~~~~e~~~~~~~~~g~~~v~~~~ 74 (261) T PRK07831 11 HGLLAGKVVVVTAAA----------------GTGIGSATARRALEEGADVVISDIHERRLGETADELAAELGLGRVEGVV 74 (261) T ss_pred CCCCCCCEEEEECCC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEE T ss_conf 874699849994999----------------6478999999999879989998087777899999999843877289997 Q ss_pred ----EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCC Q ss_conf ----4657789999998505-888799740444443222210112334557751045521806----8988762148995 Q gi|254780622|r 254 ----HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPS 324 (405) Q Consensus 254 ----~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~ 324 (405) ..+..++|.+.+.+.+ ..|++|..|.+....+.. + +.-+++...+.+.|.-+-- .+..+.+++ ... T Consensus 75 ~Dvt~~~~v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~~--e--~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~~-~gG 149 (261) T PRK07831 75 CDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVV--D--MTDDEWSRVLDVTLTGTFRATRAALRYMRAAP-HGG 149 (261) T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC-CCC T ss_conf 568999999999999999829986999888668998814--4--99999999861321519999999999999769-997 Q ss_pred EEE Q ss_conf 899 Q gi|254780622|r 325 IVV 327 (405) Q Consensus 325 ~lV 327 (405) .+| T Consensus 150 ~Ii 152 (261) T PRK07831 150 VIV 152 (261) T ss_pred EEE T ss_conf 898 No 41 >PRK05866 short chain dehydrogenase; Provisional Probab=97.40 E-value=0.00062 Score=45.10 Aligned_cols=184 Identities=20% Similarity=0.269 Sum_probs=95.0 Q ss_pred CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C---CCCCEEEE--- Q ss_conf 3200179778984042010102135762157727889999999825883899841566-7-----7---65674675--- Q gi|254780622|r 186 KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A---DPPNVMTI--- 253 (405) Q Consensus 186 ~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~---~~~~~~~i--- 253 (405) .+.+|+||.+|||+|. || .|.++|+.+...||+|.++.-... + + .-..+..+ T Consensus 34 ~P~dL~GKvaLITGas---------------sG-IG~aiA~~la~~Ga~Vvl~~R~~~~l~~~~~~i~~~g~~~~~~~~D 97 (290) T PRK05866 34 TPVDLTGKRILLTGAS---------------SG-IGEAAAEKFARRGATVVAVARRKDLLDAVADRITAAGGDAMAIPCD 97 (290) T ss_pred CCCCCCCCEEEECCCC---------------CH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECC T ss_conf 4978999989990813---------------09-9999999999869989999899999999999999649908999778 Q ss_pred --EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC----HHHHHHHHHCCCCCCEE Q ss_conf --4657789999998505-8887997404444432222101123345577510455218----06898876214899589 Q gi|254780622|r 254 --HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN----PDILKIIGHHQCRPSIV 326 (405) Q Consensus 254 --~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~----pdIL~~i~~~k~~~~~l 326 (405) .-+..+++.+.+.+.+ ..|++|.+|.++...+........ .+....+.+.+.-. .-.+..+.+++ . ..+ T Consensus 98 vtd~~~v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~~~--~d~~~~~~vN~~g~~~l~~~~lp~M~~~~-~-G~I 173 (290) T PRK05866 98 LSDLDAVDALVADVEERIGGVDILINNAGRSIRRPLAESLDRW--HDVERTMVLNYYAPLRLIRGLAPGMIERG-D-GHI 173 (290) T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C-CEE T ss_conf 8989999999999999859988899757666787422215779--99999999983999999987509999669-9-649 Q ss_pred EEEE---CCCC----------------HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCC-EEECCCCC Q ss_conf 9981---1412----------------38999999999749989999205776777776611899983698-59727899 Q gi|254780622|r 327 VGFA---AETQ----------------CIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDK-IEEYPELP 386 (405) Q Consensus 327 VGFk---aET~----------------~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~-~~~~~~~s 386 (405) |-.+ +... .+-+....-+..+| |=.|.|..+ +..++. +.+.. ....+.++ T Consensus 174 VnisS~~~~~~~~p~~~~Y~ASKaAl~~lt~sLa~El~~~g---IrVn~V~PG--~V~Tpm-----~a~~~~~~~~~~~~ 243 (290) T PRK05866 174 INVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRG---VHSTTLYYP--LVATPM-----IAPTKAYDGLPALT 243 (290) T ss_pred EEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC---EEEEEEECC--CCCCCC-----CCCCCCCCCCCCCC T ss_conf 99927243278898864189999999999999999852619---699999768--898756-----79887767888899 Q ss_pred HHHHHHHHHHHHH Q ss_conf 8999999999999 Q gi|254780622|r 387 KAEVADRLCHLIV 399 (405) Q Consensus 387 K~~iA~~Il~~i~ 399 (405) -+++|++|++-+. T Consensus 244 pe~~A~~iv~a~~ 256 (290) T PRK05866 244 ADEAAEWMVTAAR 256 (290) T ss_pred HHHHHHHHHHHHH T ss_conf 9999999999984 No 42 >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional Probab=97.37 E-value=0.00081 Score=44.34 Aligned_cols=78 Identities=17% Similarity=0.270 Sum_probs=49.1 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC---------CCCCCCEE--EE--- Q ss_conf 00179778984042010102135762157727889999999825883899841566---------77656746--75--- Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS---------IADPPNVM--TI--- 253 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~---------~~~~~~~~--~i--- 253 (405) .+|+||.+|||+| |+-.|.++|+.|...||+|.+.+.... +....+++ .+ T Consensus 4 ~~L~gK~alVTGg----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~g~~~~~~~~D 67 (260) T PRK08416 4 NEMKGKTLVISGG----------------TRGIGKAIVYEFAQSGVNIAFTYNSNVEEADKIAQDLEKKYGIKARAYPLN 67 (260) T ss_pred CCCCCCEEEEECC----------------CHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECC T ss_conf 7789998999673----------------409999999999987999999859988999999999988419836999778 Q ss_pred --EHHHHHHHHHHHHHCCC-CCEEEEEHHHH Q ss_conf --46577899999985058-88799740444 Q gi|254780622|r 254 --HVERAEDMLQEVLKALP-VDIAVMVSAVS 281 (405) Q Consensus 254 --~v~t~~em~~~~~~~~~-~D~~I~aAAVS 281 (405) +.+..+++.+.+.+.+. .|++|..|.++ T Consensus 68 v~~~~~~~~~~~~i~~~~g~iDilVnnA~i~ 98 (260) T PRK08416 68 ILEPETYKELFKKIDADFDRVDFFISNAIIS 98 (260) T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEECCEEC T ss_conf 8999999999999999819978998643422 No 43 >PRK09242 tropinone reductase; Provisional Probab=97.37 E-value=0.00091 Score=44.04 Aligned_cols=160 Identities=19% Similarity=0.236 Sum_probs=86.4 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCE--EEE--- Q ss_conf 00179778984042010102135762157727889999999825883899841566--------77-65674--675--- Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNV--MTI--- 253 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~--~~i--- 253 (405) -.|+||++|||+| |+-.|.++|+.+...||+|.++.-... +. ..++. ..+ T Consensus 6 f~L~gK~alITGg----------------s~GIG~a~a~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D 69 (258) T PRK09242 6 WRLDGQTALITGA----------------SKGIGLAIARELLGLGADVLIVARDADALAQARDELAEEFPERELHGLAAD 69 (258) T ss_pred CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEE T ss_conf 6379999999484----------------868999999999987998999969889999999999864479729999930 Q ss_pred --EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH----HHHHCCCCCCEE Q ss_conf --4657789999998505-888799740444443222210112334557751045521806898----876214899589 Q gi|254780622|r 254 --HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK----IIGHHQCRPSIV 326 (405) Q Consensus 254 --~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~----~i~~~k~~~~~l 326 (405) .-++.+++.+++.+.+ ..|++|.+|.+....+. . ++.-+...+.+.+.|.-.--+.+ .+.++ ....+ T Consensus 70 v~~~~~~~~~~~~~~~~~g~iDiLVnnAG~~~~~~~--~--~~s~~~w~~~~~vNl~~~~~l~~~~~p~m~~~--~~G~I 143 (258) T PRK09242 70 VSDDEDRRAILDWVEDHWDGLHILVNNAGGNITKAA--I--DYTEDEWRGIFETNLFSAFELSRYAYPLLKRH--AASSI 143 (258) T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC--C--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEE T ss_conf 799999999999999974999799989988999980--0--19999999999998199999999999999975--99279 Q ss_pred EEEEC---CC--CHHHHH----------HHHHHHHCCCCEEEEECCCCCCCCCCCCCEEE Q ss_conf 99811---41--238999----------99999974998999920577677777661189 Q gi|254780622|r 327 VGFAA---ET--QCIEQN----------AREKLLNKGADFIVSNCILPDTGFVGKEWNKV 371 (405) Q Consensus 327 VGFka---ET--~~l~~~----------A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v 371 (405) |-+.- .. .....+ .+.--.+-+-+=|-.|-|.++ ++.++.++. T Consensus 144 InisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG--~i~T~~~~~ 201 (258) T PRK09242 144 VNIGSVSGLTHVRSGAPYGMTKAALQQMTRNLAVEWAEDGIRVNAVAPW--YIRTRRTSG 201 (258) T ss_pred EEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEC--CCCCHHHHC T ss_conf 9993042116898755679999999999999999980279899998358--898721202 No 44 >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated Probab=97.35 E-value=0.00038 Score=46.44 Aligned_cols=107 Identities=27% Similarity=0.298 Sum_probs=66.5 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC----------CCCCEEEE----- Q ss_conf 017977898404201010213576215772788999999982588389984156677----------65674675----- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA----------DPPNVMTI----- 253 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~----------~~~~~~~i----- 253 (405) +|+||.+|||+| |+-.|.++|+.+...|++|.+........ ....+..+ T Consensus 2 ~L~gK~~lITGg----------------s~GIG~aia~~la~~G~~Vii~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlt 65 (248) T PRK05557 2 SLEGKVALVTGA----------------SRGIGRAIAERLAAQGANVVLNYASSEAGAEALVAEIGALGGKALAVQGDVA 65 (248) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCC T ss_conf 679988999489----------------7689999999999879989999698565899999999963995899990389 Q ss_pred EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH Q ss_conf 4657789999998505-8887997404444432222101123345577510455218068988 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI 315 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~ 315 (405) .-...++|.+.+.+.. +.|++|.+|++....+-. ++.-....+.+.+.+.-.--+.+. T Consensus 66 ~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~----~~~~~~~~~~~~vN~~~~~~~~~~ 124 (248) T PRK05557 66 DAESIERAVDEAKAEFGGVDILVNNAGITRDNLLM----RMKEEDWDRVIDTNLTGVFNLTKA 124 (248) T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999829971999899779999915----599999999998783049999999 No 45 >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated Probab=97.35 E-value=0.00054 Score=45.49 Aligned_cols=108 Identities=19% Similarity=0.232 Sum_probs=62.9 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CCCCCCEEE-----EEHHHHHHH Q ss_conf 00179778984042010102135762157727889999999825883899841566-776567467-----546577899 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IADPPNVMT-----IHVERAEDM 261 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~~~~~~~~-----i~v~t~~em 261 (405) ..|+||.+|||+|. +-.|.++|+.+...|++|..+.-... +.....+.. -+.+..+++ T Consensus 4 ~~l~gK~alITG~s----------------~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~Dv~~~~~v~~~ 67 (253) T PRK08220 4 MDFSGKTVWVTGAA----------------QGIGYAVALAFVEAGAKVIGFDQAFEQLNEQYPFATFVLDVADAAAVAQV 67 (253) T ss_pred CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCEEEEEEECCCHHHHHHH T ss_conf 89999989995885----------------68999999999987999999978877874899779999737999999999 Q ss_pred HHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH Q ss_conf 99998505-8887997404444432222101123345577510455218068988 Q gi|254780622|r 262 LQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI 315 (405) Q Consensus 262 ~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~ 315 (405) .+++.+.+ +.|++|.+|.+..+.+-. + +.-+.....+.+.|.-.--+.+. T Consensus 68 ~~~~~~~~g~iDilVnnAG~~~~~~~~--~--~~~~~~~~~~~vNl~~~~~~~~~ 118 (253) T PRK08220 68 CQRLLAETGPLDVLVNVAGVLRMGATD--S--LSDEDWQQTFAVNAGGVFNLSRA 118 (253) T ss_pred HHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHH T ss_conf 999999739988899899878999804--4--99999999999974638999999 No 46 >PRK08085 gluconate 5-dehydrogenase; Provisional Probab=97.35 E-value=0.00048 Score=45.83 Aligned_cols=108 Identities=18% Similarity=0.291 Sum_probs=66.4 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC------CCCCE-------EEEE Q ss_conf 0179778984042010102135762157727889999999825883899841566-77------65674-------6754 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA------DPPNV-------MTIH 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~------~~~~~-------~~i~ 254 (405) +|+||.+|||+|+. -.|.++|+.+...||+|.+..-... .+ ...+. ++-. T Consensus 6 ~L~gK~alVTG~~~----------------GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dvtd 69 (254) T PRK08085 6 SLAGKNILITGSAQ----------------GIGFLLATGLAEYGAEIIINDITAERAEKAVAKLRQEGIKAHAAAFNVTH 69 (254) T ss_pred CCCCCEEEEECCCC----------------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC T ss_conf 89999899968567----------------89999999999869999999698899999999998449818999826899 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH Q ss_conf 657789999998505-88879974044444322221011233455775104552180689887 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII 316 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i 316 (405) .++.+.+.+++.+.+ +.|++|.+|.+....|-. .+.-+.....+.+.|.-.--+.+.+ T Consensus 70 ~~~v~~~v~~~~~~~G~iDilVnNAG~~~~~~~~----~~~~e~w~~~~~vNl~g~f~~~q~~ 128 (254) T PRK08085 70 KQEIEAAIEHIEKDIGPIDVLINNAGIQRRHPFT----EFPEQEWNDVIAVNQTAVFLVSQAV 128 (254) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999839986999898678887701----0989999999999849999999998 No 47 >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional Probab=97.34 E-value=0.0011 Score=43.57 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=19.3 Q ss_pred CCCCCCEEEE-EEECH--HHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 9888556999-95284--78999999999999879889998 Q gi|254780622|r 1 MDLSGKKIAL-IMCGS--VAVYKSLDLIRRLRERGAVVIPV 38 (405) Q Consensus 1 m~l~~k~Ill-gvtGs--iaa~k~~~l~~~L~~~g~~V~vv 38 (405) |+|+||++|+ |.+|+ |. ..+++.|.+.|++|.+. T Consensus 2 ~~L~GK~alVTGaa~g~GIG----~aiA~~la~~Ga~V~i~ 38 (254) T PRK07533 2 MPLAGKRGLVVGIANEQSIA----WGCARAFRALGAELAVT 38 (254) T ss_pred CCCCCCEEEEECCCCCCHHH----HHHHHHHHHCCCEEEEE T ss_conf 98999989996888980899----99999999879999998 No 48 >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional Probab=97.33 E-value=0.00088 Score=44.12 Aligned_cols=104 Identities=24% Similarity=0.186 Sum_probs=64.9 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC----------CCCCEEE-----EE Q ss_conf 17977898404201010213576215772788999999982588389984156677----------6567467-----54 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA----------DPPNVMT-----IH 254 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~----------~~~~~~~-----i~ 254 (405) |+||.+|||+| |+-.|.++|++|.+.||+|.+.++..... ....+.. -+ T Consensus 2 L~gKvalVTGa----------------s~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~d 65 (250) T PRK08063 2 FSGKVALVTGS----------------SRGIGKAIALRLAKEGYDIAINYARSRKAAEETANEIEQLGRKALVVKANVGD 65 (250) T ss_pred CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 89498999587----------------66999999999998899899975999899999999999549958999847999 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHH Q ss_conf 657789999998505-88879974044444322221011233455775104552180689 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDIL 313 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL 313 (405) .++.+++.+++.+.+ +.|++|.+|+...++|-. + +.-......+.+.|...--+. T Consensus 66 ~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~--~--~~~~~~~~~~~vNl~~~~~~~ 121 (250) T PRK08063 66 VEKIKEMFSQIDEHFGRLDVFVNNAASGVLRPAM--E--LEESHWDWTMNINAKALLFCA 121 (250) T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999809988999878567889926--6--999999999987403799999 No 49 >PRK06196 oxidoreductase; Provisional Probab=97.32 E-value=0.00073 Score=44.65 Aligned_cols=77 Identities=27% Similarity=0.356 Sum_probs=37.5 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-----CCCCCCEEEE-----EHHHH Q ss_conf 0179778984042010102135762157727889999999825883899841566-----7765674675-----46577 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-----IADPPNVMTI-----HVERA 258 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-----~~~~~~~~~i-----~v~t~ 258 (405) +|.||.++||+| +|| .|++.|+++..+||.|++..-... .....++..+ ...+. T Consensus 23 dL~GK~~vITGa---------------~sG-IG~~tA~~La~~Ga~Vil~~R~~~k~~~a~~~i~~~~~~~lDLs~~~sV 86 (316) T PRK06196 23 DLSGKTAIVTGG---------------YSG-LGLETTRALAQAGAHVVVPARRPDAAREALAGIDGVEVVALDLADLASV 86 (316) T ss_pred CCCCCEEEECCC---------------CCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEECCCCCHHHH T ss_conf 999998999179---------------967-9999999999789989999499999999998741785798368899999 Q ss_pred HHHHHHHHHCC-CCCEEEEEHHHH Q ss_conf 89999998505-888799740444 Q gi|254780622|r 259 EDMLQEVLKAL-PVDIAVMVSAVS 281 (405) Q Consensus 259 ~em~~~~~~~~-~~D~~I~aAAVS 281 (405) .+..+++.+.. +.|++|..|.|- T Consensus 87 r~~a~~~~~~~~~lDvLInNAGi~ 110 (316) T PRK06196 87 RAFAERFLDSGRRIDILINNAGVM 110 (316) T ss_pred HHHHHHHHHHCCCCEEEEECCCCC T ss_conf 999999997579832999578767 No 50 >PRK07370 enoyl-(acyl carrier protein) reductase; Validated Probab=97.32 E-value=0.00053 Score=45.52 Aligned_cols=80 Identities=26% Similarity=0.281 Sum_probs=37.3 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC----------CCCCC-E-----EE Q ss_conf 01797789840420101021357621577278899999998258838998415667----------76567-4-----67 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI----------ADPPN-V-----MT 252 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~----------~~~~~-~-----~~ 252 (405) +|+||++|||+++ ++.=.|.++|+.+...||+|.+.+-+... ....+ . .+ T Consensus 4 ~L~GK~alVTGaa--------------g~~GiG~aia~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 69 (259) T PRK07370 4 DLTGKKALVTGIA--------------NNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCNV 69 (259) T ss_pred CCCCCEEEEECCC--------------CCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC T ss_conf 9999989997989--------------98579999999999869999999478701358999999984128648999128 Q ss_pred EEHHHHHHHHHHHHHCC-CCCEEEEEHHHHH Q ss_conf 54657789999998505-8887997404444 Q gi|254780622|r 253 IHVERAEDMLQEVLKAL-PVDIAVMVSAVSD 282 (405) Q Consensus 253 i~v~t~~em~~~~~~~~-~~D~~I~aAAVSD 282 (405) -.-...+++.+++.+.+ ..|++|.+|+.+. T Consensus 70 s~~~~v~~~~~~~~~~~G~iDilVnna~~~~ 100 (259) T PRK07370 70 QDDAQIEEVFETIKQKWGQLDILVHCLAFAG 100 (259) T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEEECCCC T ss_conf 9999999999999998589877986301146 No 51 >PRK08936 glucose-1-dehydrogenase; Provisional Probab=97.29 E-value=0.001 Score=43.64 Aligned_cols=100 Identities=16% Similarity=0.200 Sum_probs=65.6 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---------CCCCEEE------- Q ss_conf 017977898404201010213576215772788999999982588389984156677---------6567467------- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA---------DPPNVMT------- 252 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~---------~~~~~~~------- 252 (405) +|+||.+|||+| ++-.|.++|+.+...||+|.+... .+.. ...+.+. T Consensus 4 ~L~gKvalVTGa----------------~~GIG~aia~~la~~Ga~V~i~~~-~~~~~~~~~~~~~~~~g~~~~~~~~Dv 66 (261) T PRK08936 4 DLEGKVVVITGG----------------STGLGRAMAVRFGKEKAKVVINYR-SDESEANDVAEEIKKVGGEAIAVKGDV 66 (261) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECC-CCHHHHHHHHHHHHHCCCCEEEEECCC T ss_conf 899998999684----------------778999999999987999999728-987899999999996599389998279 Q ss_pred EEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC Q ss_conf 54657789999998505-8887997404444432222101123345577510455218 Q gi|254780622|r 253 IHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN 309 (405) Q Consensus 253 i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~ 309 (405) -+-++.+++.+++.+.+ +.|++|.+|++....+.. ++........+.+.|.-. T Consensus 67 ~~~~~v~~~v~~~~~~~G~iDiLVNNAg~~~~~~~~----~~~~e~w~~~~~iNl~~~ 120 (261) T PRK08936 67 TVESDVVNLIQSAVKEFGTLDVMINNAGIENAVPSH----EMPLEDWNKVINTNLTGA 120 (261) T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHH T ss_conf 999999999999999829988999899789998813----399999999999971649 No 52 >PRK05854 short chain dehydrogenase; Provisional Probab=97.27 E-value=0.0013 Score=43.09 Aligned_cols=39 Identities=36% Similarity=0.433 Sum_probs=23.5 Q ss_pred CCCCCEEEE-EEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHH Q ss_conf 888556999-95284789999999999998798899985856863 Q gi|254780622|r 2 DLSGKKIAL-IMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQK 45 (405) Q Consensus 2 ~l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~ 45 (405) +|.||.+++ |.|.+| ..+.++.|.++|+.|.+. .++.++ T Consensus 11 dL~GK~~vITGa~sGI----G~~~a~~La~~Ga~Vil~-~R~~~k 50 (314) T PRK05854 11 DLSGKLAVVTGASSGL----GFGLARRLAAAGADVILP-VRNRAK 50 (314) T ss_pred CCCCCEEEECCCCCHH----HHHHHHHHHHCCCEEEEE-ECCHHH T ss_conf 9999989990688299----999999999784989999-799999 No 53 >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=97.27 E-value=0.0014 Score=42.76 Aligned_cols=183 Identities=16% Similarity=0.197 Sum_probs=94.6 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC------CCCCE-------EEEE Q ss_conf 0179778984042010102135762157727889999999825883899841566-77------65674-------6754 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA------DPPNV-------MTIH 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~------~~~~~-------~~i~ 254 (405) .|+||.+|||+|. +=.|.++|+.|.++|++|.++.-... ++ .-.+. .+-. T Consensus 3 sL~gKvalITGas----------------~GIG~aiA~~la~~Ga~V~l~~r~~~~l~~~~~~i~~~g~~~~~~~~Dvtd 66 (238) T PRK07666 3 SLQGKNALITGAG----------------RGIGRAVAIALAKEGVNVGLLARSEENLKAVAKEVEAEGVKAVIATADVSD 66 (238) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCC T ss_conf 9999989991637----------------789999999999879989999899999999999999559927999930799 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH----HHHHHHHHCCCCCCEEEEE Q ss_conf 657789999998505-88879974044444322221011233455775104552180----6898876214899589998 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP----DILKIIGHHQCRPSIVVGF 329 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p----dIL~~i~~~k~~~~~lVGF 329 (405) .+..+++.+++.+.+ ..|++|..|.+..+.+-. +. .-++....+.+.|.-.- -++..+.+++ ...+|-. T Consensus 67 ~~~v~~~v~~~~~~~G~iDiLVNNAGi~~~~~~~--~~--~~e~~~~~~~vNl~g~~~~~~~~lp~M~~~~--~G~IIni 140 (238) T PRK07666 67 YEEVTTAIETLKNGLGSIDILINNAGISKFGKFL--EL--DVAEWEKIIQVNLMGVYYVTRAVLPSMIEQQ--SGDIINI 140 (238) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEEEE T ss_conf 9999999999999819987899847457999823--39--9999999998962999999999999999749--9589998 Q ss_pred E------CCCC------------HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHH Q ss_conf 1------1412------------389999999997499899992057767777766118999836985972789989999 Q gi|254780622|r 330 A------AETQ------------CIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVA 391 (405) Q Consensus 330 k------aET~------------~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA 391 (405) + .... .+-+....-+..+| |=.|.|.++ +..++...-.-+ .++... ..+.=+++| T Consensus 141 sS~ag~~~~~~~~~Y~aSK~av~glt~~la~El~~~g---IrVn~v~PG--~v~T~m~~~~~~-~~~~~~-~~~~PedVA 213 (238) T PRK07666 141 SSTAGQKGAPVTSAYSASKFAVLGLTESLMMEVRKHN---IRVTALTPS--TVATDMAVDLGL-TDGNPD-KVMQPEDLA 213 (238) T ss_pred CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC---EEEEEEEEC--CCCCCCCCCCCC-CCCCCC-CCCCHHHHH T ss_conf 7777706799980699999999999999999854139---699999858--898624678777-878830-257999999 Q ss_pred HHHHHHHHH Q ss_conf 999999999 Q gi|254780622|r 392 DRLCHLIVE 400 (405) Q Consensus 392 ~~Il~~i~~ 400 (405) +.++..+.. T Consensus 214 ~~vv~~l~~ 222 (238) T PRK07666 214 EFIVAQLKL 222 (238) T ss_pred HHHHHHHCC T ss_conf 999999839 No 54 >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Probab=97.26 E-value=0.0014 Score=42.87 Aligned_cols=81 Identities=22% Similarity=0.349 Sum_probs=55.5 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC------CCCCCCCEEEE-----EHHH Q ss_conf 017977898404201010213576215772788999999982588389984156------67765674675-----4657 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV------SIADPPNVMTI-----HVER 257 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~------~~~~~~~~~~i-----~v~t 257 (405) .|+||.+|||+|+ +-+|.++|+.+...||+|.++.-.. .......+..+ ..++ T Consensus 2 ~L~gKvalITGgs----------------~GIG~aia~~~a~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~ 65 (262) T TIGR03325 2 RLKGEVVLVTGGA----------------SGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDD 65 (262) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCHHH T ss_conf 9899889990678----------------789999999999879999999899899999998679967999845799999 Q ss_pred HHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 789999998505-8887997404444432 Q gi|254780622|r 258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) .+++.+++.+.+ +.|++|..|.+.+|.- T Consensus 66 ~~~~v~~~~~~~G~iDiLVnNAG~~~~~~ 94 (262) T TIGR03325 66 HKEAVARCVAAFGKIDCLIPNAGIWDYST 94 (262) T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 99999999998499888997265168776 No 55 >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional Probab=97.24 E-value=0.0012 Score=43.26 Aligned_cols=31 Identities=29% Similarity=0.425 Sum_probs=13.6 Q ss_pred CCCCEEEE-EEEC--HHHHHHHHHHHHHHHHCCCEEEE Q ss_conf 88556999-9528--47899999999999987988999 Q gi|254780622|r 3 LSGKKIAL-IMCG--SVAVYKSLDLIRRLRERGAVVIP 37 (405) Q Consensus 3 l~~k~Ill-gvtG--siaa~k~~~l~~~L~~~g~~V~v 37 (405) |+||++|+ |.++ +|+. .+++.|.+.|++|.+ T Consensus 4 L~GK~alVTGaa~~~GiG~----aiA~~la~~GA~V~i 37 (262) T PRK07984 4 LSGKRILVTGVASKLSIAY----GIAQAMHREGAELAF 37 (262) T ss_pred CCCCEEEEECCCCCCHHHH----HHHHHHHHCCCEEEE T ss_conf 8998799989999725999----999999987999999 No 56 >PRK12746 short chain dehydrogenase; Provisional Probab=97.23 E-value=0.0011 Score=43.58 Aligned_cols=188 Identities=19% Similarity=0.197 Sum_probs=94.6 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC---------CC-CCCCE-----EEE Q ss_conf 0179778984042010102135762157727889999999825883899841566---------77-65674-----675 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS---------IA-DPPNV-----MTI 253 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~---------~~-~~~~~-----~~i 253 (405) +|+||.++||+|. +-.|.++|+.+...||+|.+..+.-. ++ ..... .+- T Consensus 3 ~l~gKvalITGga----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 66 (254) T PRK12746 3 NLDGKVALVTGAS----------------RGIGRAIAMRLANDGALVAIHYGRNKAAADETIREIESNGGKAFLIEADLN 66 (254) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 9999889994847----------------689999999999879999996599989999999999855992899975779 Q ss_pred EHHHHHHHHHHHHHCC-------CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEE Q ss_conf 4657789999998505-------888799740444443222210112334557751045521806898876214899589 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-------PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIV 326 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-------~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~l 326 (405) ..+..++|.+++.+.+ +.|++|.+|++....+-. +. ..+.....+.+.|.-.--+.+...+.-....-+ T Consensus 67 ~~~~~~~~~~~~~~~~~~~~g~g~iDiLVnnAg~~~~~~~~--~~--~~~~~~~~~~vNl~~~f~~~k~~~p~m~~~G~I 142 (254) T PRK12746 67 SIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIE--NT--TEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRV 142 (254) T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHH--HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE T ss_conf 99999999999999986641689851899799788999914--49--999999999985346899999999998616966 Q ss_pred EEEEC---CCC--HHHHH-----HHHHH-----HHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCC---E-EE--CCC- Q ss_conf 99811---412--38999-----99999-----9749989999205776777776611899983698---5-97--278- Q gi|254780622|r 327 VGFAA---ETQ--CIEQN-----AREKL-----LNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDK---I-EE--YPE- 384 (405) Q Consensus 327 VGFka---ET~--~l~~~-----A~~Kl-----~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~---~-~~--~~~- 384 (405) |-+.- ... ....+ |..-| .+-+-+-|=.|-|.++ ++.++.++-.+-+++- . .. +++ T Consensus 143 VnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~e~a~~gIrVNaVaPG--~i~T~~~~~~~~~~~~~~~~~~~~~lgR~ 220 (254) T PRK12746 143 INISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPG--YTKTDINAKLLDDPEIRNFATNSSVFGRI 220 (254) T ss_pred EEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC--CCCCHHHHHCCCCHHHHHHHHHCCCCCCC T ss_conf 9992432335788737789999999999999999965139899998789--89863343304999999999727997897 Q ss_pred CCHHHHHHHHHHHH Q ss_conf 99899999999999 Q gi|254780622|r 385 LPKAEVADRLCHLI 398 (405) Q Consensus 385 ~sK~~iA~~Il~~i 398 (405) .+-+|+|.-++-.. T Consensus 221 g~p~dia~~v~FL~ 234 (254) T PRK12746 221 GQVEDIADAVAFLA 234 (254) T ss_pred CCHHHHHHHHHHHH T ss_conf 59999999999995 No 57 >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional Probab=97.23 E-value=0.00057 Score=45.33 Aligned_cols=81 Identities=19% Similarity=0.195 Sum_probs=41.0 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCH-HHHHHHHHHHHCCCCEEEEECCCC-C--------CCC-C---CEEEEE Q ss_conf 0179778984042010102135762157727-889999999825883899841566-7--------765-6---746754 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQ-QGHAIAKSLAYFGAEVILISGPVS-I--------ADP-P---NVMTIH 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk-~G~~iA~~~~~~Ga~V~li~g~~~-~--------~~~-~---~~~~i~ 254 (405) .|+||++|||+|+ +|. .|++||+.+...||+|.+..-.-. . ... . .+.+-+ T Consensus 5 ~L~GK~alVTGaa---------------~g~Gig~aia~~~~~~Ga~V~i~~~~~~~~~~~~~l~~~~g~~~~~~~Dvt~ 69 (260) T PRK06603 5 LLQGKKGLITGIA---------------NNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN 69 (260) T ss_pred CCCCCEEEEECCC---------------CCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCC T ss_conf 6899989998999---------------9668999999999987999999668679999999999843837698657999 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHH Q ss_conf 657789999998505-888799740444443 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWR 284 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~ 284 (405) -++.+++.+++.+.+ ..|++|..|++.+.. T Consensus 70 ~~~v~~~~~~~~~~~G~iDiLVnnag~~~~~ 100 (260) T PRK06603 70 PKSISNLFDDIKEKWGSFDFLLHGMAFADKN 100 (260) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCC T ss_conf 9999999999999869977899644237776 No 58 >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=97.22 E-value=0.0013 Score=43.01 Aligned_cols=107 Identities=23% Similarity=0.208 Sum_probs=62.7 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC---------CC-CCCCEEEE--EH-- Q ss_conf 179778984042010102135762157727889999999825883899841566---------77-65674675--46-- Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS---------IA-DPPNVMTI--HV-- 255 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~---------~~-~~~~~~~i--~v-- 255 (405) |+||.+|||+| |+| .|.++|+.|...||+|.+-...-. +. .......+ .+ T Consensus 1 L~gKvalITGg---------------s~G-IG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~ 64 (249) T PRK06077 1 LKDKVVVVTGS---------------GRG-IGRAIAVRLAKEGAKVVVNAKKRAEEMNETLRMVKEYGGEGIGVLADVST 64 (249) T ss_pred CCCCEEEEECC---------------CCH-HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 96198999263---------------678-99999999998799899984887689999999999759958999847999 Q ss_pred -HHHHHHHHHHHHCCC-CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH Q ss_conf -577899999985058-8879974044444322221011233455775104552180689887 Q gi|254780622|r 256 -ERAEDMLQEVLKALP-VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII 316 (405) Q Consensus 256 -~t~~em~~~~~~~~~-~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i 316 (405) +..+++.+++.+.+. .|++|..|.+..+.+-. + +.-+.....+.+.|.-.--+.+.. T Consensus 65 ~~~v~~~~~~~~~~~g~iDiLVnNAG~~~~~~~~--~--~~~~~~~~~~~vN~~~~~~~~~~~ 123 (249) T PRK06077 65 REGCRTLAKAALDNFGVVDILVNNAGLGLFSPFL--N--ADDRLIEKHISTDLKSVIYCSQEA 123 (249) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC--C--CCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999819988899857757887501--0--999999999988621899999999 No 59 >PRK12744 short chain dehydrogenase; Provisional Probab=97.22 E-value=0.0011 Score=43.44 Aligned_cols=112 Identities=20% Similarity=0.219 Sum_probs=66.2 Q ss_pred CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-----------CCCCEEE--- Q ss_conf 20017977898404201010213576215772788999999982588389984156677-----------6567467--- Q gi|254780622|r 187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA-----------DPPNVMT--- 252 (405) Q Consensus 187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-----------~~~~~~~--- 252 (405) +..|+||.+|||+|. +-.|.++|+.+...||+|.+++-..... ...+.+. T Consensus 3 ~~~L~gKvalVTGgs----------------~GIG~aiA~~la~~Ga~vv~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 66 (257) T PRK12744 3 DHSLKGKVVLIAGGA----------------KNLGGLIARDLAAQGAKAVAIHYNSAATKADAEETVAAVKAAGAKAVAF 66 (257) T ss_pred CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE T ss_conf 999899989992887----------------5899999999998799899993787436899999999999739928999 Q ss_pred ----EEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHH Q ss_conf ----54657789999998505-8887997404444432222101123345577510455218068988762 Q gi|254780622|r 253 ----IHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGH 318 (405) Q Consensus 253 ----i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~ 318 (405) -.-.+.+++.+++.+.+ ..|++|.+|......+-. + +.-.+....+.+.+.-.--+.+...+ T Consensus 67 ~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~--~--~~~~~~~~~~~vN~~~~~~~~~~~~~ 133 (257) T PRK12744 67 QADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIV--E--ISEAEYDEMFAVNSKSAFFFIKEAGR 133 (257) T ss_pred ECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 7688999999999999999809988999766445677233--3--22888888988887669999999999 No 60 >PRK09072 short chain dehydrogenase; Provisional Probab=97.21 E-value=0.002 Score=41.88 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=20.8 Q ss_pred CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 98885569999528478999999999999879889998 Q gi|254780622|r 1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPV 38 (405) Q Consensus 1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv 38 (405) |+|+||+++ |||+-+-+ ...+++.|.++|+.|-.+ T Consensus 1 M~l~~K~vl--ITGassGI-G~a~A~~la~~G~~vil~ 35 (262) T PRK09072 1 MDLKDKRVL--LTGASGGI-GEALAEALCAAGARLLLV 35 (262) T ss_pred CCCCCCEEE--EECCCCHH-HHHHHHHHHHCCCEEEEE T ss_conf 998998899--94862399-999999999879989999 No 61 >PRK06197 short chain dehydrogenase; Provisional Probab=97.21 E-value=0.0016 Score=42.42 Aligned_cols=39 Identities=21% Similarity=0.328 Sum_probs=21.2 Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHH Q ss_conf 8885569999528478999999999999879889998585686 Q gi|254780622|r 2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQ 44 (405) Q Consensus 2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~ 44 (405) +|.||.++ |||+-+-+ ..+.++.|.++|+.|.+.- ++.+ T Consensus 13 DL~GK~~l--ITGa~sGI-G~~~A~~La~~ga~Vil~~-R~~~ 51 (306) T PRK06197 13 DQSGRVAV--VTGANTGL-GYETAAALAAKGAHVVLAV-RNLD 51 (306) T ss_pred CCCCCEEE--ECCCCCHH-HHHHHHHHHHCCCEEEEEE-CCHH T ss_conf 98999999--91689599-9999999997849899997-9899 No 62 >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional Probab=97.20 E-value=0.00053 Score=45.53 Aligned_cols=35 Identities=26% Similarity=0.267 Sum_probs=23.5 Q ss_pred CCCCCCEEEE-EEEC--HHHHHHHHHHHHHHHHCCCEEEEEE Q ss_conf 9888556999-9528--4789999999999998798899985 Q gi|254780622|r 1 MDLSGKKIAL-IMCG--SVAVYKSLDLIRRLRERGAVVIPVM 39 (405) Q Consensus 1 m~l~~k~Ill-gvtG--siaa~k~~~l~~~L~~~g~~V~vv~ 39 (405) |.|+||++|+ |.+| +|. ..+++.|.+.|++|-+.- T Consensus 1 M~L~GK~alITGaag~~GIG----~aiA~~la~~GA~V~i~~ 38 (274) T PRK08415 1 MIMKGKKGLIVGVANNKSIA----YGIAKACFEQGAELAFTY 38 (274) T ss_pred CCCCCCEEEEECCCCCCHHH----HHHHHHHHHCCCEEEEEE T ss_conf 92899879998999983799----999999998699999984 No 63 >PRK06198 short chain dehydrogenase; Provisional Probab=97.20 E-value=0.0015 Score=42.62 Aligned_cols=121 Identities=22% Similarity=0.279 Sum_probs=71.0 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-------C-C--CCEEEE----- Q ss_conf 017977898404201010213576215772788999999982588389984156677-------6-5--674675----- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA-------D-P--PNVMTI----- 253 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-------~-~--~~~~~i----- 253 (405) .|+||.+|||+|. +| .|.++|+.|.+.||+|.++.+..... . - ..+..+ T Consensus 3 ~L~gK~alVTGas---------------~G-IG~aiA~~la~~Ga~vv~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~ 66 (268) T PRK06198 3 RLDGKIALVTGGT---------------QG-LGAAIARLFAERGAAGLVICGRSAEKGEAKAAELEALGAKAVFVQADLA 66 (268) T ss_pred CCCCCEEEEECCC---------------CH-HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 8899889995857---------------78-9999999999879938999629888999999999954996799982689 Q ss_pred EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCCEEEE Q ss_conf 4657789999998505-888799740444443222210112334557751045521806----89887621489958999 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPSIVVG 328 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~~lVG 328 (405) ..+..+.+.+++.+.+ ..|++|.+|.+.+..+.. +. .-+.....+.+.|.-.-- .+..+.+++.+ .-+|- T Consensus 67 ~~~~v~~~~~~~~~~fG~iDiLVNnAG~~~~~~~~--~~--~~e~w~~~~~vNl~~~~~~~~~~~~~m~~~~~~-G~IVn 141 (268) T PRK06198 67 KVEDCRAVVAAADEAFGRLDALVNAAGLTDRGTIL--DT--SPELFDRMFAVNVRAPFFLMQEAIKLMRRRRAE-GTIVN 141 (268) T ss_pred CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CEEEE T ss_conf 99999999999999839998999899789999826--59--999999999987269999999999999975999-27999 Q ss_pred EE Q ss_conf 81 Q gi|254780622|r 329 FA 330 (405) Q Consensus 329 Fk 330 (405) +. T Consensus 142 is 143 (268) T PRK06198 142 IG 143 (268) T ss_pred EE T ss_conf 91 No 64 >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional Probab=97.19 E-value=0.0019 Score=41.95 Aligned_cols=80 Identities=19% Similarity=0.284 Sum_probs=53.1 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEE-----EHHH Q ss_conf 0179778984042010102135762157727889999999825883899841566------7765674675-----4657 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPPNVMTI-----HVER 257 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~~i-----~v~t 257 (405) .|+||.+|||+| |+-.|.++|+.|...||+|.++.-... ...+..+..+ ..++ T Consensus 3 ~L~gK~alVTGa----------------s~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~ 66 (263) T PRK06200 3 WLTGQVALITGG----------------GSGIGRALVERFLAEGARVAVLERSAEKCASLRQRFGDDVLVVEGDVTSYAD 66 (263) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEECCCCCHHH T ss_conf 717288999586----------------6799999999999879999999799999999999818864687179999999 Q ss_pred HHHHHHHHHHCC-CCCEEEEEHHHHHHH Q ss_conf 789999998505-888799740444443 Q gi|254780622|r 258 AEDMLQEVLKAL-PVDIAVMVSAVSDWR 284 (405) Q Consensus 258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~ 284 (405) .+++.+.+.+.+ +.|++|.+|.+.++. T Consensus 67 ~~~~~~~~~~~~G~iDiLVnnAG~~~~~ 94 (263) T PRK06200 67 NQRAVAQTVDRFGKLDCFVGNAGIWDYY 94 (263) T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCC T ss_conf 9999999999849988899757546777 No 65 >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=97.17 E-value=0.0023 Score=41.46 Aligned_cols=78 Identities=24% Similarity=0.324 Sum_probs=46.9 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-----CC--CCCCEEEE-----EHH Q ss_conf 0179778984042010102135762157727889999999825883899841566-----77--65674675-----465 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-----IA--DPPNVMTI-----HVE 256 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-----~~--~~~~~~~i-----~v~ 256 (405) +|+||.+|||+| |+-.|.++|+.+...|++|.+..-... .. ....+..+ +-+ T Consensus 3 ~l~gK~alITGg----------------s~GIG~aia~~la~~G~~V~i~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 66 (250) T PRK07231 3 RLEGKVAIVTGA----------------GSGFGEGIARRFAAEGARVVVTDRNQEAAERVAAEIRGGRAIAVAADVSDEA 66 (250) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCHH T ss_conf 769988999388----------------8689999999999879999999798899999999844996799993079999 Q ss_pred HHHHHHHHHHHCC-CCCEEEEEHHHHH Q ss_conf 7789999998505-8887997404444 Q gi|254780622|r 257 RAEDMLQEVLKAL-PVDIAVMVSAVSD 282 (405) Q Consensus 257 t~~em~~~~~~~~-~~D~~I~aAAVSD 282 (405) ..+++.+.+.+.+ ..|++|.+|++.. T Consensus 67 ~~~~~~~~~~~~~g~iD~lInnAG~~~ 93 (250) T PRK07231 67 DVRAAVEAALERFGSVDILVNNAGTTH 93 (250) T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCC T ss_conf 999999999998199719998883378 No 66 >PRK07035 short chain dehydrogenase; Provisional Probab=97.16 E-value=0.002 Score=41.82 Aligned_cols=79 Identities=34% Similarity=0.393 Sum_probs=54.5 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------C-CCCCCEEEE-----E Q ss_conf 0179778984042010102135762157727889999999825883899841566--------7-765674675-----4 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------I-ADPPNVMTI-----H 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~-~~~~~~~~i-----~ 254 (405) +|+||.+|||+| |+-.|.++|+.+...|++|.+..-... + ........+ . T Consensus 5 ~L~gKvalITGa----------------s~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~ 68 (252) T PRK07035 5 DLTGKIALVTGA----------------SRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE 68 (252) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 678998999588----------------7499999999999879989999798899999999999649957999824899 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHH Q ss_conf 657789999998505-88879974044444 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDW 283 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf 283 (405) .++.+++.+.+.+.+ ..|++|.+|+...+ T Consensus 69 ~~~v~~~~~~~~~~~G~iDilVnnAg~~~~ 98 (252) T PRK07035 69 MEQIDALFAQIRERHGRLDILVNNAAANPY 98 (252) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCC T ss_conf 999999999999982997789876855888 No 67 >PRK06124 gluconate 5-dehydrogenase; Provisional Probab=97.16 E-value=0.002 Score=41.81 Aligned_cols=162 Identities=20% Similarity=0.184 Sum_probs=86.4 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC--------CCCCEEE-----E Q ss_conf 00179778984042010102135762157727889999999825883899841566-77--------6567467-----5 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA--------DPPNVMT-----I 253 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~--------~~~~~~~-----i 253 (405) -+|+||.+|||+| |+-.|.++|+.+...||+|.+..-... ++ ....+.. - T Consensus 10 ~~L~gK~alITGg----------------s~GIG~~ia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv~ 73 (259) T PRK06124 10 FSLAGQVALVTGS----------------ARGLGLEIARALAEAGAHVLVNGRNAARVEAAVAALRAAGGAAEALVFDIS 73 (259) T ss_pred CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCC T ss_conf 0999998999286----------------748999999999987999999969889999999999965995899995179 Q ss_pred EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH----HHHHHHCCCCCCEEEE Q ss_conf 4657789999998505-8887997404444432222101123345577510455218068----9887621489958999 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDI----LKIIGHHQCRPSIVVG 328 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdI----L~~i~~~k~~~~~lVG 328 (405) +.++.+++.+++.+.+ ..|++|.+|...+..+-.. +.-++....+.+.|.-.--+ +..+.+++ ...+|- T Consensus 74 ~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~----~~~e~~~~~~~~Nl~g~~~~~q~~~~~M~~~~--~G~IIn 147 (259) T PRK06124 74 DEEAVAAAFARIDAEHGRLDILVNNVGARNRRPLAE----LDDAEIRALLETDLVAPILLSRLAAQRMVRQG--YGRIIA 147 (259) T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHH----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEEE T ss_conf 999999999999997599979998988899999066----99999999999984999999999999987769--936999 Q ss_pred EE---CCC--CHHHHH-----HHHHH-----HHCCCCEEEEECCCCCCCCCCCCCEEEEE Q ss_conf 81---141--238999-----99999-----97499899992057767777766118999 Q gi|254780622|r 329 FA---AET--QCIEQN-----AREKL-----LNKGADFIVSNCILPDTGFVGKEWNKVSI 373 (405) Q Consensus 329 Fk---aET--~~l~~~-----A~~Kl-----~~K~~D~IVAN~i~~~~~~fgsd~n~v~l 373 (405) .. +.. ...-.+ |..-| .+-+-+=|-.|.|.++ ++-++.++-+. T Consensus 148 isS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG--~i~T~~~~~~~ 205 (259) T PRK06124 148 ITSIAGEVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPG--YFATETNAAMA 205 (259) T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC--CCCCCCHHHHC T ss_conf 72330046799837899999999999999999965139799999758--89773221112 No 68 >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional Probab=97.16 E-value=0.0015 Score=42.58 Aligned_cols=80 Identities=29% Similarity=0.310 Sum_probs=53.4 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCEEEE-----EH Q ss_conf 179778984042010102135762157727889999999825883899841566--------77-65674675-----46 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNVMTI-----HV 255 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~~~i-----~v 255 (405) |+||.+|||+| |+-.|.++|+.+...||+|.+..-... +. ....+..+ .- T Consensus 2 L~gK~alITGa----------------s~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~ 65 (258) T PRK12429 2 LKGKTALVTGA----------------ASGIGLEIALALAKEGAKVVIADLNDEAAAKAAEAIKKAGGKAIGVAMDVTDE 65 (258) T ss_pred CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCH T ss_conf 89598999488----------------75899999999998799999997988999999999984499189998358999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 57789999998505-8887997404444432 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) ...+++.+.+.+.+ ..|++|.+|.+....+ T Consensus 66 ~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~ 96 (258) T PRK12429 66 EAINAGIDKVVETFGGVDILVNNAGIQHVAP 96 (258) T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 9999999999998299709998998889988 No 69 >PRK12742 oxidoreductase; Provisional Probab=97.15 E-value=0.0018 Score=42.19 Aligned_cols=81 Identities=23% Similarity=0.299 Sum_probs=37.4 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----CCCCCEEEEE--HHHHHHH Q ss_conf 01797789840420101021357621577278899999998258838998415667-----7656746754--6577899 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-----ADPPNVMTIH--VERAEDM 261 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-----~~~~~~~~i~--v~t~~em 261 (405) .|+||++|||+| |+-.|.++|+.|...||+|.+.+..... ....+...+. +...+.+ T Consensus 3 ~l~gK~alITGa----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 66 (237) T PRK12742 3 AFTGKSVLVLGG----------------SRGIGAAIVRRFVTDGANVVFTYAGSKDAAERLAAETGATAVFTDSADRDAV 66 (237) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCEEEEECCCCHHHH T ss_conf 989998999278----------------8799999999999879999997799989999998863982899354589999 Q ss_pred HHHHHHCCCCCEEEEEHHHHHHHH Q ss_conf 999985058887997404444432 Q gi|254780622|r 262 LQEVLKALPVDIAVMVSAVSDWRF 285 (405) Q Consensus 262 ~~~~~~~~~~D~~I~aAAVSDf~~ 285 (405) .+.+.+.-+.|++|.+|++..|.+ T Consensus 67 ~~~~~~~g~iD~lVnnAg~~~~~~ 90 (237) T PRK12742 67 IDVVRKSGPLDILVVNAGIALFGD 90 (237) T ss_pred HHHHHHHCCCCEEEECCCCCCCCC T ss_conf 999998699989998997789998 No 70 >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional Probab=97.14 E-value=0.0023 Score=41.46 Aligned_cols=79 Identities=27% Similarity=0.254 Sum_probs=41.8 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC-C------CCCCCCEEEE--EH---H Q ss_conf 017977898404201010213576215772788999999982588389984156-6------7765674675--46---5 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV-S------IADPPNVMTI--HV---E 256 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~-~------~~~~~~~~~i--~v---~ 256 (405) .|+||++|||+|. ++.=.|+++|+.+...||+|.+..-.- . ...+.....+ .+ + T Consensus 4 ~L~GK~~lVTG~~--------------~~~GIG~a~A~~la~~GA~Vvi~~~~~~~~~~~~~~~~~~~~~~i~~Dv~~~~ 69 (256) T PRK07889 4 LLEGKRILVTGVI--------------TDSSIAFHIARVAQEQGAEVVLTGFRRLRLTERIAKRLPEPAPVLELDVTNEE 69 (256) T ss_pred CCCCCEEEEECCC--------------CCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCHH T ss_conf 1499979998998--------------85689999999999879999998389358999999865888759994288999 Q ss_pred HHHHHHHHHHHCC-CCCEEEEEHHHH Q ss_conf 7789999998505-888799740444 Q gi|254780622|r 257 RAEDMLQEVLKAL-PVDIAVMVSAVS 281 (405) Q Consensus 257 t~~em~~~~~~~~-~~D~~I~aAAVS 281 (405) ..+++.+++.+.+ ..|++|++|++. T Consensus 70 ~v~~~~~~~~~~~G~lD~lVnnag~~ 95 (256) T PRK07889 70 HLASLADRVREHIGGLDGVVHSIGFA 95 (256) T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCC T ss_conf 99999999999868978797421347 No 71 >PRK07067 sorbitol dehydrogenase; Provisional Probab=97.14 E-value=0.0025 Score=41.24 Aligned_cols=121 Identities=19% Similarity=0.211 Sum_probs=67.7 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC------CCCCCCCEEE-----EEHHH Q ss_conf 017977898404201010213576215772788999999982588389984156------6776567467-----54657 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV------SIADPPNVMT-----IHVER 257 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~------~~~~~~~~~~-----i~v~t 257 (405) .|+||.+|||+|+ +-.|.++|+.|...||+|.+..-.. .......... -.-+. T Consensus 2 rL~gKvalVTGas----------------~GIG~aia~~la~~Ga~V~i~d~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~ 65 (256) T PRK07067 2 RLQGKVALLTGAA----------------SGIGEAVAQRYLREGARVVLADIKPARAALAALEIGPAAVAVSLDVTRQDS 65 (256) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCHHH T ss_conf 9899889993767----------------789999999999879999999798899999999819975999984899999 Q ss_pred HHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCCEEEEEE Q ss_conf 789999998505-888799740444443222210112334557751045521806----8988762148995899981 Q gi|254780622|r 258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPSIVVGFA 330 (405) Q Consensus 258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~~lVGFk 330 (405) .+++.+++.+.+ ..|++|.+|.+.++.+-.. +..+.....+.+.|.-.-- .+..+.++. ....+|-++ T Consensus 66 v~~~v~~~~~~~G~iDiLVNNAGi~~~~~~~~----~~~e~~~~~~~vNl~g~f~~~~~~~~~m~~~~-~~G~IVnis 138 (256) T PRK07067 66 IDRIVAAAVERFGGIDILVNNAALFDMAPILE----ISRDVYDRLFAVNVKGLFFLMQAVAQHMVEQG-RGGKIINMA 138 (256) T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCCCCHHH----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEE T ss_conf 99999999998199989998998899988134----99999999999851778999999999999808-995599984 No 72 >PRK06484 short chain dehydrogenase; Validated Probab=97.13 E-value=0.0096 Score=37.44 Aligned_cols=148 Identities=18% Similarity=0.252 Sum_probs=86.3 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-EE-----------------------CCEEEEECCC Q ss_conf 32233343455899999998631013200179778984042010-10-----------------------2135762157 Q gi|254780622|r 161 NGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-PL-----------------------DPMRYIANRS 216 (405) Q Consensus 161 ~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-~I-----------------------D~VR~ItN~S 216 (405) ...=.||+.+||+|...+..+.. ....+..|..+.|-+|=+.- +. ..|=.||--+ T Consensus 205 ~~iPlgR~g~PeeiA~~v~FLaS-d~asyITG~~i~VDGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kGKvalVTGaa 283 (530) T PRK06484 205 GRIPMGRLARPDEIAEAVHFLAS-AQASYITGSTLVVDGGWDAYNQSGKAHTAQMPHPGAEFMRPVPVRAGRVVCVTGGA 283 (530) T ss_pred CCCCCCCCCCHHHHHHHHHHHCC-HHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEECCCC T ss_conf 17998887899999999999768-33258889879983893153788876644467855651577767789899992876 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCC-------CCCCCCE----EEEEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHH- Q ss_conf 727889999999825883899841566-------7765674----6754657789999998505-88879974044444- Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVILISGPVS-------IADPPNV----MTIHVERAEDMLQEVLKAL-PVDIAVMVSAVSDW- 283 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~li~g~~~-------~~~~~~~----~~i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf- 283 (405) +| .|.++|+.+...||+|.+..-... ......+ .+-+-+..+.|.+++.+.+ ..|++|..|.+.+. T Consensus 284 ~G-IG~aiA~~la~~GA~Vvi~d~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~v~~~~~~fG~iDiLVNNAGi~~~~ 362 (530) T PRK06484 284 SG-IGAAIADRFAALGDRVAIIDSDGEEAVKLREILGGEHLSWQVDITDEASVESAFAGIQGRLGPLDVLVNNAGIAEPF 362 (530) T ss_pred CH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC T ss_conf 78-99999999998879899995888999999997399736999538999999999999999829988999897789899 Q ss_pred HHHHHHHCCCCCCCCCCCCEEEEEECHHHHH Q ss_conf 3222210112334557751045521806898 Q gi|254780622|r 284 RFPKIAGTKIKRKDIGDTMRIDLMENPDILK 314 (405) Q Consensus 284 ~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~ 314 (405) .+-. + .........+.+.|.-+--..+ T Consensus 363 ~~~~--e--~t~e~w~~v~~vNl~g~f~~~~ 389 (530) T PRK06484 363 APSA--E--QSLEDFRRTIDVNLKGAFHCSR 389 (530) T ss_pred CCCC--C--CCHHHHHHHHHHHHHHHHHHHH T ss_conf 9800--0--9999999999997199999999 No 73 >PRK05867 short chain dehydrogenase; Provisional Probab=97.13 E-value=0.0018 Score=42.06 Aligned_cols=101 Identities=22% Similarity=0.293 Sum_probs=60.7 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C-CCCC--EEEE-----E Q ss_conf 0179778984042010102135762157727889999999825883899841566-7-----7-6567--4675-----4 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A-DPPN--VMTI-----H 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~-~~~~--~~~i-----~ 254 (405) +|+||.+|||+|+. -.|.++|+.|...||+|.+..-... + + ...+ +..+ + T Consensus 6 ~L~gKvalVTGas~----------------GIG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~ei~~~g~~~~~~~~Dvt~ 69 (253) T PRK05867 6 DLHGKRALITGAST----------------GIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ 69 (253) T ss_pred CCCCCEEEEECCCC----------------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC T ss_conf 88999899979565----------------99999999999869999999798899999999998459919999836999 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC Q ss_conf 657789999998505-8887997404444432222101123345577510455218 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN 309 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~ 309 (405) -++.+++.+++.+.+ ..|++|.+|.+....+-. + +.-++....+.+.|.-. T Consensus 70 ~~~v~~~v~~~~~~~G~iDiLVnNAG~~~~~~~~--~--~~~e~w~~~~~vNl~g~ 121 (253) T PRK05867 70 HQQVTSMLDQVTAELGGIDIAVCNAGIITVTPML--D--MPLEEFQRLQNTNVTGV 121 (253) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC--C--CCHHHHHHHHHHHHHHH T ss_conf 9999999999999959985999899778887501--0--99999999999975999 No 74 >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional Probab=97.12 E-value=0.0024 Score=41.32 Aligned_cols=79 Identities=22% Similarity=0.347 Sum_probs=42.4 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--------CCCCCEEEE--EH--- Q ss_conf 01797789840420101021357621577278899999998258838998415667--------765674675--46--- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--------ADPPNVMTI--HV--- 255 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--------~~~~~~~~i--~v--- 255 (405) .|+||.+|||+| |+-.|.++|+.|.+.|++|.+..-.-.. .....+..+ .+ T Consensus 5 ~l~gKvalITGa----------------s~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 68 (260) T PRK12823 5 RFAGKVAVVTGA----------------AQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELVAAGGEALALTADLETY 68 (260) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCH T ss_conf 879998999488----------------6789999999999879999999694689999999985499489998126885 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHH Q ss_conf 57789999998505-88879974044444 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDW 283 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf 283 (405) +..+++.+.+.+.+ +.|++|..|+.+-+ T Consensus 69 ~~~~~~~~~~~~~~G~iDiLVnnag~~~~ 97 (260) T PRK12823 69 AGAQAVMAAAVEAFGRIDVLINNVGGTIW 97 (260) T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCC T ss_conf 89999999999983998799977522457 No 75 >PRK05872 short chain dehydrogenase; Provisional Probab=97.12 E-value=0.0028 Score=40.88 Aligned_cols=82 Identities=22% Similarity=0.302 Sum_probs=43.7 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEE--EH---H Q ss_conf 00179778984042010102135762157727889999999825883899841566------7765674675--46---5 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPPNVMTI--HV---E 256 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~~i--~v---~ 256 (405) .+|+||.+|||+|. +=.|.++|+.+..+||+|.++.-... .+....+..+ .| + T Consensus 5 ~~L~gKvalITGas----------------sGIG~aiA~~la~~Ga~Vvl~dr~~~~l~~~~~~lg~~~~~~~~DVtd~~ 68 (296) T PRK05872 5 TSLDGKVVFVTGAA----------------RGVGAELARRLHARGAKVALVDLEEAELAALAAELGDRVLTVVADVTDLA 68 (296) T ss_pred CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCHH T ss_conf 88599879992710----------------58999999999987998999989999999999983887389998279999 Q ss_pred HHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 7789999998505-8887997404444432 Q gi|254780622|r 257 RAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 257 t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) ..+++.+++.+.+ ..|++|.+|.++.+.+ T Consensus 69 ~v~~~v~~i~~~~G~iDiLVnNAGi~~~~~ 98 (296) T PRK05872 69 AMQAAAEEAVERFGGIDVVVANAGIASYGS 98 (296) T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 999999999997199878765562579976 No 76 >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=97.12 E-value=0.0025 Score=41.17 Aligned_cols=77 Identities=22% Similarity=0.226 Sum_probs=42.4 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-------C-CCCCEEEE-----E Q ss_conf 0179778984042010102135762157727889999999825883899841566-7-------7-65674675-----4 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-------A-DPPNVMTI-----H 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-------~-~~~~~~~i-----~ 254 (405) +|+||.+|||+|. +-.|.++|+.+...|++|.+..-... + . ....+..+ + T Consensus 2 ~L~gK~~lITGas----------------~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dv~~ 65 (253) T PRK08217 2 DLKDKVIVITGGA----------------QGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAQCAALGGEAEVYAANVTD 65 (253) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 7899889994887----------------789999999999879989999799999999999999659948999824799 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHH Q ss_conf 657789999998505-888799740444 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVS 281 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVS 281 (405) .+..+++.+.+.+.+ ..|++|.+|++. T Consensus 66 ~~~v~~~~~~~~~~~g~iD~lVnNAGi~ 93 (253) T PRK08217 66 EEDVEATFAQIAEDFGQLNGLINNAGIL 93 (253) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCC T ss_conf 9999999999999839985999857436 No 77 >PRK06841 short chain dehydrogenase; Provisional Probab=97.11 E-value=0.0027 Score=40.95 Aligned_cols=122 Identities=25% Similarity=0.242 Sum_probs=72.6 Q ss_pred CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEE-----EEEH Q ss_conf 200179778984042010102135762157727889999999825883899841566------77656746-----7546 Q gi|254780622|r 187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPPNVM-----TIHV 255 (405) Q Consensus 187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~-----~i~v 255 (405) +-+|+||.+|||+|+ +=.|.++|+.|...||+|.+..-... ......+. +-.- T Consensus 10 ~~~l~gKvalVTGas----------------~GIG~aiA~~la~~Ga~V~i~d~~~~~~~~~~~~~~~~~~~~~~Dvt~~ 73 (255) T PRK06841 10 AFDLSGKVAVVTGGA----------------SGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDS 73 (255) T ss_pred CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEECCCH T ss_conf 758999999997967----------------7899999999998799999996987899999984599669999846999 Q ss_pred HHHHHHHHHHHHCCC-CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCCEEEEEE Q ss_conf 577899999985058-88799740444443222210112334557751045521806----8988762148995899981 Q gi|254780622|r 256 ERAEDMLQEVLKALP-VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPSIVVGFA 330 (405) Q Consensus 256 ~t~~em~~~~~~~~~-~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~~lVGFk 330 (405) +..+++.+++.+.+. .|++|.+|.+..+.+-. ++.-.++...+.+.|.-.-- .+..+.+++ ..-+|-++ T Consensus 74 ~~v~~~v~~~~~~~g~iDiLVNNAGi~~~~~~~----~~~~e~w~~~~~vNl~g~f~~~~~~~~~m~~~~--~G~IInis 147 (255) T PRK06841 74 QSVEAAVAAAISAFGRIDILVNSAGVALLAPAE----DVSEADWDKTIDINLKGSFLMAQAVGRHMIAAG--GGKIVNLA 147 (255) T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEEEEE T ss_conf 999999999999819987999899789999804----499999999999855999999999999999829--96599994 No 78 >PRK08264 short chain dehydrogenase; Validated Probab=97.10 E-value=0.0042 Score=39.76 Aligned_cols=80 Identities=24% Similarity=0.250 Sum_probs=48.8 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC-CCCCCCCEEEE--EHHHHHHHHHHH Q ss_conf 017977898404201010213576215772788999999982588389984156-67765674675--465778999999 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV-SIADPPNVMTI--HVERAEDMLQEV 265 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~-~~~~~~~~~~i--~v~t~~em~~~~ 265 (405) +|+||.+|||+| |+=.|.++|+++..+|+.+.++.... .....+++..+ .+...++..+.. T Consensus 2 ~l~gK~alITGa----------------ssGIG~aiA~~la~~Ga~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 65 (235) T PRK08264 2 DIKGKVVLVTGA----------------NRGIGRAFVEELLARGAAKVYAAARDPESVDLPRVVPLQLDVTDPASVAAAA 65 (235) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCCEEEEEECCCCHHHHHHHH T ss_conf 279988999267----------------5499999999999869977999727840355598799980689999999999 Q ss_pred HHCCCCCEEEEEHHHHHHH Q ss_conf 8505888799740444443 Q gi|254780622|r 266 LKALPVDIAVMVSAVSDWR 284 (405) Q Consensus 266 ~~~~~~D~~I~aAAVSDf~ 284 (405) .+..+.|++|.+|.+..+. T Consensus 66 ~~~~~idvlVnNAGi~~~~ 84 (235) T PRK08264 66 EQASDVTILINNAGISRPG 84 (235) T ss_pred HHCCCCCEEEECCCCCCCC T ss_conf 9739986999888557789 No 79 >PRK07774 short chain dehydrogenase; Provisional Probab=97.09 E-value=0.0025 Score=41.19 Aligned_cols=77 Identities=25% Similarity=0.265 Sum_probs=50.2 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-------CCCCCCEE--EE-----E Q ss_conf 0179778984042010102135762157727889999999825883899841566-------77656746--75-----4 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-------IADPPNVM--TI-----H 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-------~~~~~~~~--~i-----~ 254 (405) +|+||.+|||+| |+-.|.++|+.+.+.|++|.+..-... .-...+.+ .+ . T Consensus 3 ~L~gK~alVTGg----------------s~GiG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~ 66 (250) T PRK07774 3 DFDDKVAIVTGA----------------AGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD 66 (250) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC T ss_conf 779988999797----------------6889999999999869999999798899999999998559849999825899 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHH Q ss_conf 657789999998505-888799740444 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVS 281 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVS 281 (405) -++.+++.+++.+.+ ..|++|.+|++. T Consensus 67 ~~~v~~~~~~~~~~fG~iDilVNnAg~~ 94 (250) T PRK07774 67 PDSAKAMADRTVSAFGGIDYLVNNAAIY 94 (250) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCC T ss_conf 9999999999999839998999888435 No 80 >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated Probab=97.09 E-value=0.002 Score=41.77 Aligned_cols=82 Identities=20% Similarity=0.218 Sum_probs=54.8 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC------C-CCCCEE-----EEEH Q ss_conf 001797789840420101021357621577278899999998258838998415667------7-656746-----7546 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI------A-DPPNVM-----TIHV 255 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~------~-~~~~~~-----~i~v 255 (405) -+|+||.+|||+| |+-.|.++|+++...||+|..+.-.-.. . ....+. +-.. T Consensus 6 ~~L~gK~alITGa----------------s~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 69 (253) T PRK08993 6 FSLEGKVAVVTGC----------------DTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKI 69 (253) T ss_pred CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCH T ss_conf 3999998999388----------------768999999999987999999558774999999996599579998037999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 57789999998505-8887997404444432 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) +..+++.+++.+.+ ..|++|.+|.+....+ T Consensus 70 ~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~ 100 (253) T PRK08993 70 DGIPALLERAVAEFGHIDILVNNAGLIRRED 100 (253) T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCCCCC T ss_conf 9999999999998499729998997788998 No 81 >PRK07060 short chain dehydrogenase; Provisional Probab=97.09 E-value=0.0023 Score=41.43 Aligned_cols=124 Identities=15% Similarity=0.210 Sum_probs=70.1 Q ss_pred CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC---CCCCEEEEEHH-HHHHH Q ss_conf 200179778984042010102135762157727889999999825883899841566-77---65674675465-77899 Q gi|254780622|r 187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA---DPPNVMTIHVE-RAEDM 261 (405) Q Consensus 187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~---~~~~~~~i~v~-t~~em 261 (405) +.+|+||.+|||+|+ +-.|.++|+.+...||+|.++.-... ++ ...+.+.+.++ +.++- T Consensus 4 ~~~l~gK~~lVTG~~----------------~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~ 67 (245) T PRK07060 4 AFDFSGKSVLVTGAS----------------SGIGRACAVALAARGARVVAAARNQADLDRLAGETGCEPLRLDVGDDAA 67 (245) T ss_pred CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCEEEEEECCCHHH T ss_conf 737999989994777----------------6899999999998799999997998999999986398799980799999 Q ss_pred HHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHH---CCCCCCEEEEEE Q ss_conf 99998505-8887997404444432222101123345577510455218068988762---148995899981 Q gi|254780622|r 262 LQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGH---HQCRPSIVVGFA 330 (405) Q Consensus 262 ~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~---~k~~~~~lVGFk 330 (405) .++..+.+ ..|++|.+|++..+.+.. +++.++....+.+.|.-.--+.+...+ .+.+...+|-.. T Consensus 68 v~~~~~~~g~iDilVnnAG~~~~~~~~----~~~~e~~~~~~~vNl~~~~~~~k~~~~~m~~~~~~G~IInis 136 (245) T PRK07060 68 IRAALAGAGAFDGLVNCAGIASLESAI----DMTAAGFDRVMAVNARGALLVARHVARAMIRAGRGGSIVNVS 136 (245) T ss_pred HHHHHHHCCCCCEEEECCCCCCCCCCH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE T ss_conf 999999659998999898879999901----399999999999970999999999999999808980799986 No 82 >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] Probab=97.06 E-value=0.0079 Score=37.97 Aligned_cols=133 Identities=23% Similarity=0.301 Sum_probs=79.8 Q ss_pred CEEE-ECCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCC--------C Q ss_conf 6898-4056600000388999999986400013-4652125531032233343455899999998631013--------2 Q gi|254780622|r 118 PVLI-APAMNFMMWAKPATQRNVEILQKDGCYF-IGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSK--------E 187 (405) Q Consensus 118 pi~i-aPaMn~~M~~~p~~~~nl~~L~~~g~~v-i~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~--------~ 187 (405) -+++ .|+.-.+ ..++-++.|.++|+.+ +-|....+.. ..+.-|=.+.++ ++.++. . T Consensus 180 ~iiiAips~~~~-----~~~~i~~~l~~~~~~v~~lP~~~~l~~--~~~~lreI~ieD-------LLgR~pV~~d~~~i~ 245 (588) T COG1086 180 LILIAIPSASQE-----ERRRILLRLARTGIAVRILPQLTDLKD--LNGQLREIEIED-------LLGRPPVALDTELIG 245 (588) T ss_pred EEEEECCCCCHH-----HHHHHHHHHHHCCCCEEECCCHHHHHH--HCCCCCCCCHHH-------HHCCCCCCCCHHHHH T ss_conf 699964878899-----999999998755970785574899987--324654377989-------738999987879998 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----------CCCCCEEEE--- Q ss_conf 001797789840420101021357621577278899999998258838998415667-----------765674675--- Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-----------ADPPNVMTI--- 253 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-----------~~~~~~~~i--- 253 (405) ..+.||+||||+|+ |.-|.++.+.....+.....+.+.... ..| ..+.. T Consensus 246 ~~~~gK~vLVTGag----------------GSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~-~~~~~~~i 308 (588) T COG1086 246 AMLTGKTVLVTGGG----------------GSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP-ELKLRFYI 308 (588) T ss_pred HHCCCCEEEEECCC----------------CCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCC-CCCEEEEE T ss_conf 67079889996898----------------73679999999854987899961763779999999986278-75168996 Q ss_pred -EHHHHHHHHHHHHHCCCCCEEEEEHHHHH Q ss_conf -46577899999985058887997404444 Q gi|254780622|r 254 -HVERAEDMLQEVLKALPVDIAVMVSAVSD 282 (405) Q Consensus 254 -~v~t~~em~~~~~~~~~~D~~I~aAAVSD 282 (405) .|...+-|.. +++..+.|+++||||--- T Consensus 309 gdVrD~~~~~~-~~~~~kvd~VfHAAA~KH 337 (588) T COG1086 309 GDVRDRDRVER-AMEGHKVDIVFHAAALKH 337 (588) T ss_pred CCCCCHHHHHH-HHHCCCCCEEEEHHHHCC T ss_conf 35346899999-986388866887555536 No 83 >PRK07814 short chain dehydrogenase; Provisional Probab=97.05 E-value=0.0026 Score=41.08 Aligned_cols=102 Identities=23% Similarity=0.259 Sum_probs=63.1 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-------C-CCCCEEEE-----E Q ss_conf 0179778984042010102135762157727889999999825883899841566-7-------7-65674675-----4 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-------A-DPPNVMTI-----H 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-------~-~~~~~~~i-----~ 254 (405) +|+||.+|||+|. +-.|.++|+.+...||+|.+..-... + . ....+..+ . T Consensus 7 ~L~gKvalITGgs----------------~GIG~aia~~la~~Ga~V~i~~~~~~~l~~~~~~i~~~g~~~~~~~~Dv~~ 70 (263) T PRK07814 7 RLDGQVAVVTGAG----------------RGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH 70 (263) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC T ss_conf 8999989995896----------------689999999999879989999698999999999998529928999815899 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH Q ss_conf 657789999998505-88879974044444322221011233455775104552180 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP 310 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p 310 (405) -+..+++.+++.+.+ ..|++|.+|+.....+- .+ +.-....+.+.+.|.-.- T Consensus 71 ~~~v~~~v~~~~~~~G~iDiLVnNAg~~~~~~~--~~--~~~e~w~~~~~vNl~~~~ 123 (263) T PRK07814 71 PEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPL--LS--TSTKDLADAFTFNVATAH 123 (263) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH--HH--CCHHHHHHHHHHHHHHHH T ss_conf 999999999999982998899989866788844--54--889999999999719999 No 84 >PRK09186 flagellin modification protein A; Provisional Probab=97.04 E-value=0.003 Score=40.66 Aligned_cols=77 Identities=25% Similarity=0.335 Sum_probs=50.7 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC--------CC--CCCCCEEEE--EH- Q ss_conf 017977898404201010213576215772788999999982588389984156--------67--765674675--46- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV--------SI--ADPPNVMTI--HV- 255 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~--------~~--~~~~~~~~i--~v- 255 (405) .|+||.+|||+| ||-.|.++|+.|...||+|.+..-.. .+ .....+..+ .+ T Consensus 1 lL~gK~~lVTGg----------------s~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~Dvt 64 (255) T PRK09186 1 MLEGKTILITGA----------------GGLIGSALVKAILEAGGIVIAADINKEALNKLLESLGTIEKTKLTLVELDIT 64 (255) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCC T ss_conf 989598999795----------------8689999999999879999999698899999999998705980799984689 Q ss_pred --HHHHHHHHHHHHCC-CCCEEEEEHHHH Q ss_conf --57789999998505-888799740444 Q gi|254780622|r 256 --ERAEDMLQEVLKAL-PVDIAVMVSAVS 281 (405) Q Consensus 256 --~t~~em~~~~~~~~-~~D~~I~aAAVS 281 (405) +..+++.+++.+.+ ..|++|.+|.+. T Consensus 65 ~~~~v~~~~~~~~~~~g~id~lVnnA~~~ 93 (255) T PRK09186 65 DQESLEEFLSKSQERYGKIDGAVNCAYPR 93 (255) T ss_pred CHHHHHHHHHHHHHHHCCCCEEEECCCCC T ss_conf 99999999999999819977899757667 No 85 >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional Probab=97.04 E-value=0.0026 Score=41.05 Aligned_cols=35 Identities=34% Similarity=0.387 Sum_probs=17.7 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 0179778984042010102135762157727889999999825883899 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVIL 237 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~l 237 (405) .|+||++|||+|+ |++-.|.+||+.+.+.||+|.+ T Consensus 3 ~L~gK~~lVTGa~--------------~~~GIG~aia~~la~~Ga~v~~ 37 (261) T PRK08690 3 FLQGKKILITGMI--------------SERSIAYGIAKACREQGAELAF 37 (261) T ss_pred CCCCCEEEEECCC--------------CCHHHHHHHHHHHHHCCCEEEE T ss_conf 9999889998987--------------8638999999999985999999 No 86 >PRK08628 short chain dehydrogenase; Provisional Probab=97.04 E-value=0.0027 Score=40.98 Aligned_cols=82 Identities=24% Similarity=0.217 Sum_probs=51.5 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCCEEEE-----E Q ss_conf 0017977898404201010213576215772788999999982588389984156677--------65674675-----4 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPNVMTI-----H 254 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~~~~i-----~ 254 (405) .+|+||.+|||+|. +=.|.++|+.+...||.|.++.-.-... .-..+..+ + T Consensus 3 ~~l~gKvalVTG~s----------------~GIG~a~a~~la~~Ga~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~ 66 (258) T PRK08628 3 LNLKDKVVIVTGGA----------------SGIGAAISLRLAEEGAIPVVFGRSAPDDEFAEELRALQPRAEFVQVDLQD 66 (258) T ss_pred CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCC T ss_conf 99799989992777----------------78999999999987998999808802399999999539978999952799 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 657789999998505-8887997404444432 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) .+..+++.+++.+.+ ..|++|.+|.+.+..+ T Consensus 67 ~~~v~~~v~~~~~~~g~iDiLVnnAGi~~~~~ 98 (258) T PRK08628 67 DAQCRDAVAQTVAKFGRIDGLVNNAGVNDGVG 98 (258) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 99999999999998299889998882278877 No 87 >PRK12827 short chain dehydrogenase; Provisional Probab=97.03 E-value=0.0028 Score=40.86 Aligned_cols=152 Identities=20% Similarity=0.221 Sum_probs=84.2 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--CC---------CCC--CEEEE-- Q ss_conf 0179778984042010102135762157727889999999825883899841566--77---------656--74675-- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--IA---------DPP--NVMTI-- 253 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--~~---------~~~--~~~~i-- 253 (405) .|+||.+|||+|. +-.|.++|+.|...||+|.++.-... .. ... .+..+ T Consensus 3 ~L~gKvalVTGas----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 66 (251) T PRK12827 3 SLDSRRVLITGGS----------------GGLGRAIAVRLAADGADVIVLDIHPMRGRAEAEAVAALIEAAGGKALGLAF 66 (251) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEE T ss_conf 9899889996825----------------589999999999879989998488853289999999999964984999990 Q ss_pred ---EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHH---CCCCCCEE Q ss_conf ---4657789999998505-8887997404444432222101123345577510455218068988762---14899589 Q gi|254780622|r 254 ---HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGH---HQCRPSIV 326 (405) Q Consensus 254 ---~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~---~k~~~~~l 326 (405) +..+.+++.+++.+.+ ..|++|.+|.+....+-. .+..++....+.+.|.-+--+.+.+.+ ++.....+ T Consensus 67 Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAG~~~~~~~~----~~~~e~w~~~~~vNl~g~~~~~~~~~~~m~~~~~~G~I 142 (251) T PRK12827 67 DVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFA----ELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRI 142 (251) T ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE T ss_conf 38999999999999999839997999899889999903----49999999999998599999999999999983899469 Q ss_pred EEEECC---C--CHHHHHHHHH----------HHHCCCCEEEEECCCCC Q ss_conf 998114---1--2389999999----------99749989999205776 Q gi|254780622|r 327 VGFAAE---T--QCIEQNAREK----------LLNKGADFIVSNCILPD 360 (405) Q Consensus 327 VGFkaE---T--~~l~~~A~~K----------l~~K~~D~IVAN~i~~~ 360 (405) |-+.-. . .....++-.| -.+-+-+=|-.|-|.++ T Consensus 143 InisS~~~~~~~~~~~~Y~asKaav~~lTr~lA~e~a~~gIrVNaV~PG 191 (251) T PRK12827 143 VNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPG 191 (251) T ss_pred EEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC T ss_conf 9982533355789868899999999999999999965049699999648 No 88 >PRK07825 short chain dehydrogenase; Provisional Probab=97.02 E-value=0.003 Score=40.66 Aligned_cols=81 Identities=23% Similarity=0.208 Sum_probs=42.2 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCCCCCE--EEEEHHHH Q ss_conf 0179778984042010102135762157727889999999825883899841566--------7765674--67546577 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IADPPNV--MTIHVERA 258 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~~~~~~--~~i~v~t~ 258 (405) +|+||.|+||+|. +=.|.++|+.+..+||+|.+..-... ......+ .+-.-++. T Consensus 2 dl~gKvvlITGas----------------sGIG~a~A~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~DVtd~~~v 65 (273) T PRK07825 2 NLRGKVIAITGGA----------------RGIGLATARALAALGAKVAIGDLDEALAKESAAELGLVVGGPLDVTDPASF 65 (273) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCHHHH T ss_conf 9999889992623----------------399999999999879989999799999999998607855999147999999 Q ss_pred HHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 89999998505-8887997404444432 Q gi|254780622|r 259 EDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 259 ~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) +++.+++.+.+ +.|++|-+|.+..+.+ T Consensus 66 ~~~~~~~~~~~G~iDiLVNNAGi~~~~~ 93 (273) T PRK07825 66 AAFLDAVEADLGPIDVLVNNAGIMPVGP 93 (273) T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 9999999997099778998787789987 No 89 >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional Probab=97.02 E-value=0.0036 Score=40.20 Aligned_cols=17 Identities=41% Similarity=0.264 Sum_probs=10.9 Q ss_pred HHHHHHHHCCCCEEEEE Q ss_conf 99999982588389984 Q gi|254780622|r 223 AIAKSLAYFGAEVILIS 239 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~ 239 (405) .+|.++..+|-.|..|+ T Consensus 172 ~lA~elg~~gIRVNaV~ 188 (260) T PRK06997 172 YLAVSLGPKGIRVNAIS 188 (260) T ss_pred HHHHHHHHCCCEEEEEE T ss_conf 99998611797898873 No 90 >PRK07523 gluconate 5-dehydrogenase; Provisional Probab=97.02 E-value=0.0042 Score=39.72 Aligned_cols=159 Identities=19% Similarity=0.221 Sum_probs=81.6 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEE--EHH---H Q ss_conf 0179778984042010102135762157727889999999825883899841566------7765674675--465---7 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPPNVMTI--HVE---R 257 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~~i--~v~---t 257 (405) +|+||.+|||+|. +=.|.++|+.|...||+|.+..-... .........+ .+. . T Consensus 6 ~L~gK~alVTG~s----------------~GIG~aiA~~la~~Ga~Vvi~~r~~~~l~~~~~~l~~~~~~~~~Dvtd~~~ 69 (251) T PRK07523 6 DLTGRRALITGSS----------------QGIGYALAKGLAQAGAEVILNGRDAAKLAAAAESLKGSAHTLAFDVTDHDA 69 (251) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCHHH T ss_conf 6899989995836----------------699999999999879999999699899999999818872799995799999 Q ss_pred HHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH----HHHHHHCCCCCCEEEEEEC- Q ss_conf 789999998505-8887997404444432222101123345577510455218068----9887621489958999811- Q gi|254780622|r 258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDI----LKIIGHHQCRPSIVVGFAA- 331 (405) Q Consensus 258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdI----L~~i~~~k~~~~~lVGFka- 331 (405) .+.+.+++.+.+ +.|++|.+|.+....|-. + +..++..+.+.+.|.-.--+ +..+.++ ....+|-++- T Consensus 70 v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~~--~--~~~e~~~~~~~vNl~~~f~~~~~~~~~m~~~--~~G~IInisS~ 143 (251) T PRK07523 70 VRAAIDAFEAEIGPIDILVNNAGMQHRTPLE--D--FPADAFERLLQTNISSVFYVGQAVARHMIAR--GAGKIINIASV 143 (251) T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEEEEEH T ss_conf 9999999999759986999898879999905--5--9999999999997399999999998998863--99679999415 Q ss_pred --CC--CHHHHHH-----HHHH-----HHCCCCEEEEECCCCCCCCCCCCCEEE Q ss_conf --41--2389999-----9999-----974998999920577677777661189 Q gi|254780622|r 332 --ET--QCIEQNA-----REKL-----LNKGADFIVSNCILPDTGFVGKEWNKV 371 (405) Q Consensus 332 --ET--~~l~~~A-----~~Kl-----~~K~~D~IVAN~i~~~~~~fgsd~n~v 371 (405) .. .....++ ..-| .+-.-+=|-.|-|.++ ++.++.++. T Consensus 144 ~~~~~~~~~~~Y~asKaav~~lTr~lA~e~a~~gIrVNaVaPG--~i~T~~~~~ 195 (251) T PRK07523 144 QSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPG--YFDTPLNAA 195 (251) T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC--CCCCHHHHH T ss_conf 7607689947899999999999999999970209499999737--898732432 No 91 >PRK07776 consensus Probab=97.01 E-value=0.0046 Score=39.49 Aligned_cols=160 Identities=19% Similarity=0.231 Sum_probs=86.7 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CC-CCCCEE-----EEEH Q ss_conf 00179778984042010102135762157727889999999825883899841566------77-656746-----7546 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IA-DPPNVM-----TIHV 255 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~-~~~~~~-----~i~v 255 (405) -+|+||.+|||+|. +-.|.++|+.+...||+|.+..-.-+ .. ...... +-+. T Consensus 4 ~~L~gKv~lITG~~----------------~GIG~aiA~~la~~Ga~V~i~~~~~~~l~~~~~~l~~~~~~~~~~Dv~~~ 67 (252) T PRK07776 4 LDLTGRTAIVTGAS----------------RGIGLAIAQALAAAGANVVITARKQEALDEAAAQLGAERALGVAGHAVDE 67 (252) T ss_pred CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCH T ss_conf 89999989994778----------------79999999999987998999979889999999984799579999742899 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHH-HHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHH--CCCCCCEEEEEEC Q ss_conf 57789999998505-8887997404444-432222101123345577510455218068988762--1489958999811 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSD-WRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGH--HQCRPSIVVGFAA 331 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSD-f~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~--~k~~~~~lVGFka 331 (405) +..+++.+.+.+.+ ..|++|..|++.. +.+- .+ +.-+...+.+.+.|..+--+.+.+.+ .+.+..-+|-+.- T Consensus 68 ~~~~~~~~~~~~~~g~iDilVnNAg~~~~~~~~--~e--~~~e~w~~~~~~Nl~~~~~~~~~~~~~m~~~~~G~IInisS 143 (252) T PRK07776 68 EHAREAVDLTLERFGSVDILVNNAGTNPAYGPL--ID--QDLARFRKIFEVNVWAALGWTQLAWKAWMGEHGGAVVNVAS 143 (252) T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCH--HH--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC T ss_conf 999999999999849986999878668889981--34--99999999999980789999999999986627964998077 Q ss_pred CC-----CHHHHHH----------HHHHHHCCCCEEEEECCCCCCCCCCCCCEE Q ss_conf 41-----2389999----------999997499899992057767777766118 Q gi|254780622|r 332 ET-----QCIEQNA----------REKLLNKGADFIVSNCILPDTGFVGKEWNK 370 (405) Q Consensus 332 ET-----~~l~~~A----------~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~ 370 (405) .. .....++ +.--.+-+-+ |=.|.|+++ ++.++..+ T Consensus 144 ~~~~~~~~~~~~Y~asKaav~~ltk~lA~e~a~~-IrVN~V~PG--~i~T~~~~ 194 (252) T PRK07776 144 IGGLHPSPGIGAYGASKAALIHLTKQLALELAPR-VRVNAVAPG--VVRTKFAE 194 (252) T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEEC--CCCCCCHH T ss_conf 4411579984799999999999999999998699-889999645--79885411 No 92 >PRK07791 short chain dehydrogenase; Provisional Probab=97.00 E-value=0.0016 Score=42.43 Aligned_cols=81 Identities=23% Similarity=0.301 Sum_probs=52.3 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC-------CCCCC---------CCCCEE- Q ss_conf 0179778984042010102135762157727889999999825883899841-------56677---------656746- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG-------PVSIA---------DPPNVM- 251 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g-------~~~~~---------~~~~~~- 251 (405) .|+||.+|||+|+ +=.|.++|+.|...||+|.+..= +.+.. ...+.+ T Consensus 3 ~L~GKvalVTGas----------------~GIG~aiA~~lA~~GA~Vvi~D~~~~~~~~~~~~~~a~~~~~ei~~~g~~~ 66 (285) T PRK07791 3 LLDGRVVIVTGAG----------------GGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGAAQAVVDEITAAGGEA 66 (285) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEE T ss_conf 8899879992867----------------689999999999869999998376431224456799999999999749839 Q ss_pred ------EEEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf ------754657789999998505-8887997404444432 Q gi|254780622|r 252 ------TIHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 252 ------~i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) +-..+..+.|.+++.+.+ ..|++|.+|.+....+ T Consensus 67 ~~~~~Dvsd~~~v~~~v~~~~~~fG~iDiLVNNAGi~~~~~ 107 (285) T PRK07791 67 VANGDDIADWDQAANLVDAAVETFGGLDVLVNNAGILRDRM 107 (285) T ss_pred EEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 99968999999999999999998399869997886678887 No 93 >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Probab=96.99 E-value=0.0035 Score=40.28 Aligned_cols=119 Identities=24% Similarity=0.242 Sum_probs=69.5 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC--------CCC-CCCCEE-----EEEH Q ss_conf 17977898404201010213576215772788999999982588389984156--------677-656746-----7546 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV--------SIA-DPPNVM-----TIHV 255 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~--------~~~-~~~~~~-----~i~v 255 (405) |+||.+|||+| |+=+|.++|+.+...||+|.+..-.. .+. ....+. +-.. T Consensus 1 L~gKvalITG~----------------s~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~g~~~~~~~~Dv~d~ 64 (250) T TIGR03206 1 LKDKTAIVTGG----------------GGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDR 64 (250) T ss_pred CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCH T ss_conf 95199999685----------------76899999999998799999997988999999999995399289999448999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH----HHHHHHHCCCCCCEEEEEE Q ss_conf 57789999998505-888799740444443222210112334557751045521806----8988762148995899981 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD----ILKIIGHHQCRPSIVVGFA 330 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd----IL~~i~~~k~~~~~lVGFk 330 (405) .+.+++.+.+.+.+ +.|++|.+|++.-+.+.. ++.-+.....+.+.|.-+-- .+..+.+++ ..-+|-.. T Consensus 65 ~~v~~~v~~~~~~~G~iDilvnnAg~~~~~~~~----~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--~G~IVnis 138 (250) T TIGR03206 65 DSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFT----KTEPPLWERLIAINLTGALHMHHAVLPGMVERG--AGRIVNIA 138 (250) T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEEEEC T ss_conf 999999999999759997999898889998903----499999999999982999999999999999749--91799965 No 94 >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional Probab=96.99 E-value=0.0032 Score=40.50 Aligned_cols=108 Identities=20% Similarity=0.125 Sum_probs=67.1 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C-CCCCE-------EEEE Q ss_conf 0179778984042010102135762157727889999999825883899841566-7-----7-65674-------6754 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A-DPPNV-------MTIH 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~-~~~~~-------~~i~ 254 (405) +|+||.+|||+|. +=.|.++|+.|...||+|.+..-.-. + . ...+- .+-. T Consensus 4 ~l~gKvalVTGgs----------------~GIG~a~A~~la~~Ga~V~i~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~ 67 (262) T PRK13394 4 NLNGKTAVVTGAA----------------SGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN 67 (262) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC T ss_conf 8899989995857----------------789999999999879999999798899999999999629939999815899 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH Q ss_conf 657789999998505-88879974044444322221011233455775104552180689887 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII 316 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i 316 (405) .+..+++.+++.+.+ ..|++|.+|.+..+.|-. + +.-+...+.+.+.|.-+--+.+.+ T Consensus 68 ~~~v~~~v~~~~~~~G~iDiLVnnAG~~~~~~~~--~--~~~e~w~~~~~vNl~g~~~~~~~~ 126 (262) T PRK13394 68 EDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIE--N--YSFADWKKMQAIHVDGAFLTTKAA 126 (262) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999999819999999899889999916--5--999999999999758999999999 No 95 >PRK06346 consensus Probab=96.99 E-value=0.0033 Score=40.39 Aligned_cols=78 Identities=27% Similarity=0.388 Sum_probs=55.2 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C-CCCC--EEEE-----E Q ss_conf 0179778984042010102135762157727889999999825883899841566-7-----7-6567--4675-----4 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A-DPPN--VMTI-----H 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~-~~~~--~~~i-----~ 254 (405) .|+||.++||+| |+-.|.++|+.|...||+|.+..-... . . ...+ +..+ + T Consensus 2 ~l~gKv~lITGg----------------s~GIG~a~a~~la~~Ga~V~i~~r~~e~~~~~~~~l~~~~~~~~~~~~Dv~~ 65 (251) T PRK06346 2 KLKGKVAIVTGA----------------ASGMGKSIAELFAKEGAKVVVADLNLERAQKVVEEITSNGGTAIAVVANVTK 65 (251) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC T ss_conf 889988999475----------------7889999999999879989999798999999999999639908999778898 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHH Q ss_conf 657789999998505-8887997404444 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSD 282 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSD 282 (405) -++.+++.+++.+.+ ..|++|.+|++.+ T Consensus 66 ~~~v~~~i~~~~~~fg~iDiLVnNAgi~~ 94 (251) T PRK06346 66 QEDIENMVDTAVDTYGTLDILVNNAGIMD 94 (251) T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCC T ss_conf 99999999999998299979998998899 No 96 >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional Probab=96.98 E-value=0.0032 Score=40.49 Aligned_cols=100 Identities=18% Similarity=0.231 Sum_probs=62.4 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCCEEEE-----EH Q ss_conf 017977898404201010213576215772788999999982588389984156677--------65674675-----46 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPNVMTI-----HV 255 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~~~~i-----~v 255 (405) +|+||.+|||+|+ + -.|.++|+.|.+.||+|..+.-. ..+ ....+..+ .. T Consensus 5 ~L~gKvalVTGas---------------~-GIG~aia~~la~~Ga~Vv~~~~~-~~~~~~~~~~~~g~~~~~~~~Dv~~~ 67 (251) T PRK12481 5 DLNGKVAIITGCN---------------T-GLGQGMAIGLAKAGADIVGVGVA-EAPETQAQVEALGRKFHFITADLIQQ 67 (251) T ss_pred CCCCCEEEEECCC---------------C-HHHHHHHHHHHHCCCEEEEECCC-CHHHHHHHHHHCCCCEEEEEECCCCH T ss_conf 8999989994867---------------6-89999999999869999997898-71999999997599479999127999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC Q ss_conf 57789999998505-8887997404444432222101123345577510455218 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN 309 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~ 309 (405) +..+.+.+++.+.+ ..|++|..|.+....+-. + .+-++....+.+.|.-+ T Consensus 68 ~~~~~~~~~~~~~~g~iDilVNNAG~~~~~~~~--~--~~~~~w~~~~~vNl~~~ 118 (251) T PRK12481 68 KDIDSIVSQAVEVMGHIDILINNAGIIRRQDLL--E--FGNKDWDDVININQKTV 118 (251) T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH--H--CCHHHHHHHHHHHHHHH T ss_conf 999999999999819998999899899999903--4--99999999999983779 No 97 >PRK12829 short chain dehydrogenase; Provisional Probab=96.98 E-value=0.0046 Score=39.48 Aligned_cols=108 Identities=21% Similarity=0.225 Sum_probs=64.9 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCC-CCCEE-----EEEH Q ss_conf 00179778984042010102135762157727889999999825883899841566------776-56746-----7546 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IAD-PPNVM-----TIHV 255 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~-~~~~~-----~i~v 255 (405) .+|+||.+|||+|. +=.|.++|+.|...||+|.+..-... ... -.++. +-.- T Consensus 7 ~~L~GKvalVTGgs----------------~GIG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~~~Dvt~~ 70 (264) T PRK12829 7 KPLDGLRVLVTGGA----------------SGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADP 70 (264) T ss_pred CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEECCCH T ss_conf 68999979994737----------------68999999999987998999979989999999974799759999628999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH Q ss_conf 57789999998505-888799740444443222210112334557751045521806898 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK 314 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~ 314 (405) ++.+++.+++.+.+ ..|++|.+|.+.....+ ..+ +.-+.+...+.+.|.-+--..+ T Consensus 71 ~~v~~~v~~~~~~~G~iDiLVNNAGi~~~~~~-~~~--~~~e~w~~~~~vNl~g~~~~~~ 127 (264) T PRK12829 71 AQVERVFDTAVERFGGLDVLVNNAGIAGPTGG-IDE--ITPEQWEQTLAVNLNGQFYFAR 127 (264) T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC-HHH--CCHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999973999899989989999998-023--9999999999998487899999 No 98 >PRK06701 short chain dehydrogenase; Provisional Probab=96.97 E-value=0.0028 Score=40.90 Aligned_cols=110 Identities=25% Similarity=0.291 Sum_probs=67.7 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--C------CCCCEE--EE---- Q ss_conf 001797789840420101021357621577278899999998258838998415667--7------656746--75---- Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--A------DPPNVM--TI---- 253 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--~------~~~~~~--~i---- 253 (405) ..|+||.+|||+| |+-.|.++|+.|...||+|.+....... . .-.+.+ .+ T Consensus 41 grL~GKvalVTGg----------------s~GIG~aiA~~la~~GA~V~i~~~~~~~~a~~~~~~~~~~G~~~~~~~~Dv 104 (289) T PRK06701 41 GKLKGKVALITGG----------------DSGIGRAVAVAFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDV 104 (289) T ss_pred CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCC T ss_conf 8779998999682----------------579999999999987998999828946789999999996399089998478 Q ss_pred -EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH Q ss_conf -4657789999998505-88879974044444322221011233455775104552180689887 Q gi|254780622|r 254 -HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII 316 (405) Q Consensus 254 -~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i 316 (405) +-...+++.+++.+.+ ..|++|..|+.+....+ ..+ +.-+.+...+.+.|.-+--+.+.. T Consensus 105 ~d~~~v~~~v~~~~~~fG~iDiLVNNAG~~~~~~~-~~~--~~~~~~~~~~~vNl~g~f~~~~~~ 166 (289) T PRK06701 105 SDEQFCKDAVEETVRELGRLDILVNNAAQQYPQQS-LED--ITAEQLDKTFRTNIYSYFHMTKAA 166 (289) T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC-HHH--CCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999985999899988834678887-244--999999999745217899999999 No 99 >PRK06114 short chain dehydrogenase; Provisional Probab=96.97 E-value=0.0037 Score=40.12 Aligned_cols=103 Identities=21% Similarity=0.228 Sum_probs=64.5 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--C--------CCCCEEEE---- Q ss_conf 001797789840420101021357621577278899999998258838998415667--7--------65674675---- Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--A--------DPPNVMTI---- 253 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--~--------~~~~~~~i---- 253 (405) -+|+||.+|||+|+. -.|.++|+.|...||+|.+..-.... . .......+ T Consensus 12 f~L~gKvalVTGa~~----------------GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv 75 (262) T PRK06114 12 FDLDGQVAFVTGAGS----------------GIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADV 75 (262) T ss_pred CCCCCCEEEEECCCC----------------HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCC T ss_conf 498999899968478----------------9999999999987998999958974699999999996599589998168 Q ss_pred -EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH Q ss_conf -4657789999998505-88879974044444322221011233455775104552180 Q gi|254780622|r 254 -HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP 310 (405) Q Consensus 254 -~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p 310 (405) +-+..+++.+++.+.+ ..|++|-+|.+....|.. .+.-++....+.+.|.-+- T Consensus 76 t~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~----~~~~e~w~~~~~vNl~g~f 130 (262) T PRK06114 76 TSKSDLAAAVARTEAELGALTLAVNAAGIANANPAE----EMEEEQWQTVMDINLTGVF 130 (262) T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHH T ss_conf 999999999999999819998999899899998815----5999999999999736699 No 100 >PRK08213 gluconate 5-dehydrogenase; Provisional Probab=96.96 E-value=0.0036 Score=40.17 Aligned_cols=107 Identities=22% Similarity=0.240 Sum_probs=66.8 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC------CCCC--EEEE-----E Q ss_conf 0179778984042010102135762157727889999999825883899841566-77------6567--4675-----4 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA------DPPN--VMTI-----H 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~------~~~~--~~~i-----~ 254 (405) +|+||.+|||+| |+-.|.++|+.|...||+|.+..-... ++ ...+ +..+ + T Consensus 9 ~L~gKvalVTG~----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~ 72 (259) T PRK08213 9 DLTGKTALVTGG----------------SRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWLAADVAD 72 (259) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 999998999487----------------7689999999999869999999798899999999999549958999826899 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH Q ss_conf 657789999998505-8887997404444432222101123345577510455218068988 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI 315 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~ 315 (405) -+..+++.+++.+.+ ..|++|.+|.+....|.. .+.-+.....+.+.|.-.--+.+. T Consensus 73 ~~~v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~~----~~~~e~w~~~~~vNl~g~f~~~~~ 130 (259) T PRK08213 73 EADIERLAEETLERFGHIDILVNNAGATWGAPAE----DHPVEAWDKVMNLNVRGTFLLSQA 130 (259) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC----CCCHHHHHHHHHHHCCCHHHHHHH T ss_conf 9999999999999839998999899778898645----699999999998844119999999 No 101 >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=96.96 E-value=0.0031 Score=40.62 Aligned_cols=109 Identities=17% Similarity=0.201 Sum_probs=58.9 Q ss_pred HHHHHHHHCCCCCCCCCCEEEEEECCCHHEECC-------EEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--- Q ss_conf 999986310132001797789840420101021-------3576215772788999999982588389984156677--- Q gi|254780622|r 176 RQITWLLYKSKELLLKGKRALVTSGPTYEPLDP-------MRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--- 245 (405) Q Consensus 176 ~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~-------VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--- 245 (405) +...+.|.+.+..+-.|.-|-|.++....+-|. |=.+|--|+| .|.+||+.|.+.||+|.++.=+-... T Consensus 169 ~~~lrf~ls~~sa~v~gq~~~v~~~~~~~~~~~~~pL~GKVALVTGAArG-IG~AIA~~LAreGA~VVi~Di~~a~~~l~ 247 (447) T PRK08261 169 ESTLRFFLSPRSAYVSGQVVRVGAADAAPPADWDRPLAGKVALVTGAARG-IGAAIAEVLARDGAHVVCLDVPQAGDDLA 247 (447) T ss_pred HHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHH T ss_conf 55242440666331125389963898889888788899998999172578-99999999998699999982711489999 Q ss_pred ----CCCC----EEEEEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf ----6567----46754657789999998505-8887997404444432 Q gi|254780622|r 246 ----DPPN----VMTIHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 246 ----~~~~----~~~i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) ...+ +++-.-+..+++.+.+.+.+ ..|++|++|.+...++ T Consensus 248 ~~a~elgg~al~~DVt~~~a~~~lv~~~~~~~G~lDILVnNAGi~~~~~ 296 (447) T PRK08261 248 AVAARLGGTALALDITAPDAPAKIAEHLAERHGGLDIVVHNAGITRDKT 296 (447) T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC T ss_conf 9998709808995368999999999999996499989998997899977 No 102 >PRK10675 UDP-galactose-4-epimerase; Provisional Probab=96.95 E-value=0.0052 Score=39.15 Aligned_cols=19 Identities=16% Similarity=0.093 Sum_probs=15.7 Q ss_pred HHHHHHHHHHCCCEEEEEE Q ss_conf 9999999998798899985 Q gi|254780622|r 21 SLDLIRRLRERGAVVIPVM 39 (405) Q Consensus 21 ~~~l~~~L~~~g~~V~vv~ 39 (405) .-.|++.|.+.|++|.++- T Consensus 13 Gs~l~~~Ll~~g~~V~~~d 31 (338) T PRK10675 13 GSHTCVQLLQNGHDVVILD 31 (338) T ss_pred HHHHHHHHHHCCCEEEEEE T ss_conf 9999999997849899998 No 103 >PRK12939 short chain dehydrogenase; Provisional Probab=96.95 E-value=0.004 Score=39.90 Aligned_cols=121 Identities=21% Similarity=0.229 Sum_probs=69.4 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-------CC-CCCEEEE----- Q ss_conf 00179778984042010102135762157727889999999825883899841566-7-------76-5674675----- Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-------AD-PPNVMTI----- 253 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-------~~-~~~~~~i----- 253 (405) ..|+||.+|||+| |+=.|.++|+.|...||+|.+..-... . .. ...+..+ T Consensus 3 ~~L~~KvalVTGg----------------s~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~ 66 (250) T PRK12939 3 SSLAGKRALVTGA----------------ARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLA 66 (250) T ss_pred CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCC T ss_conf 9999987999583----------------668999999999987999999969889999999999955990999992489 Q ss_pred EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH----HHHHHHCCCCCCEEEE Q ss_conf 4657789999998505-8887997404444432222101123345577510455218068----9887621489958999 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDI----LKIIGHHQCRPSIVVG 328 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdI----L~~i~~~k~~~~~lVG 328 (405) +.+..+.+.+++.+.+ ..|++|.+|.+....+-. + +.-....+.+.+.|.-+--+ +..+.++ ...-+|- T Consensus 67 ~~~~~~~~~~~~~~~~g~iDiLVNNAG~~~~~~~~--~--~~~e~~~~~~~iNl~~~~~~~k~~~~~m~~~--~~G~IIn 140 (250) T PRK12939 67 DPASVQRFFDAAAAALGGLDGLVNNAGITNSKSAT--E--LDIDTWDAVMNVNVRGTFLMSRAALPHLRDS--GRGRIVN 140 (250) T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH--H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEE T ss_conf 99999999999999749997999887789999903--4--9999999999998299999999999999984--9937999 Q ss_pred EE Q ss_conf 81 Q gi|254780622|r 329 FA 330 (405) Q Consensus 329 Fk 330 (405) +. T Consensus 141 is 142 (250) T PRK12939 141 LA 142 (250) T ss_pred EC T ss_conf 80 No 104 >PRK06138 short chain dehydrogenase; Provisional Probab=96.95 E-value=0.0042 Score=39.78 Aligned_cols=102 Identities=23% Similarity=0.189 Sum_probs=61.3 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCCCCCEEEE-----EH Q ss_conf 0179778984042010102135762157727889999999825883899841566--------7765674675-----46 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IADPPNVMTI-----HV 255 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~~~~~~~~i-----~v 255 (405) +|+||.+|||+|+ +=.|.++|+.|...||+|.+..-... +.....+..+ .. T Consensus 2 ~L~gKvalVTGas----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~ 65 (252) T PRK06138 2 RLAGRVAIVTGAG----------------SGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSA 65 (252) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCH T ss_conf 8899889994746----------------799999999999879989999688789999999983799199999428999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH Q ss_conf 57789999998505-88879974044444322221011233455775104552180 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP 310 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p 310 (405) +..+++.+.+.+.+ ..|++|.+|.+....+-. + +.-+.....+.+.|.-+- T Consensus 66 ~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~--~--~~~e~w~~~~~vNl~g~f 117 (252) T PRK06138 66 EAVEALVDFVAARWGRLDVLVNNAGFGCGGTVV--T--TDEADWDAVMRVNVGGVF 117 (252) T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC--C--CCHHHHHHHHHHHHHHHH T ss_conf 999999999999829998999898899999801--0--999999999999969999 No 105 >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional Probab=96.94 E-value=0.0035 Score=40.23 Aligned_cols=36 Identities=25% Similarity=0.328 Sum_probs=17.3 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 01797789840420101021357621577278899999998258838998 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI 238 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li 238 (405) .|+||.+|||+++. +.=.|.++|+.+...||+|.+. T Consensus 4 ~L~gK~~lVTGaag--------------~~GIG~a~A~~la~~Ga~Vv~~ 39 (252) T PRK06079 4 ILSGKKIVVMGVAN--------------KRSIAWGCAQAIKDQGATVIYT 39 (252) T ss_pred CCCCCEEEEECCCC--------------CCHHHHHHHHHHHHCCCEEEEE T ss_conf 13998899989999--------------8779999999999869999998 No 106 >PRK08226 short chain dehydrogenase; Provisional Probab=96.94 E-value=0.0045 Score=39.58 Aligned_cols=81 Identities=23% Similarity=0.236 Sum_probs=47.6 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC------CCCC--EEE-----EEH Q ss_conf 017977898404201010213576215772788999999982588389984156677------6567--467-----546 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA------DPPN--VMT-----IHV 255 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~------~~~~--~~~-----i~v 255 (405) .|+||.+|||+|. +=.|.++|+.|...||+|.+..-.-... ...+ +.. -.- T Consensus 3 ~L~gKvalVTGas----------------~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~g~~~~~~~~Dvsd~ 66 (263) T PRK08226 3 KLTGKTALITGAL----------------QGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDP 66 (263) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCH T ss_conf 9899889994737----------------799999999999879989999698799999999983699179999417999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 57789999998505-8887997404444432 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) +..+++.+++.+.+ +.|++|.+|.+....+ T Consensus 67 ~~v~~~v~~~~~~~G~iDiLVNNAGi~~~~~ 97 (263) T PRK08226 67 ASVAAAIKRAKEKEGRIDILVNNAGVCRLGN 97 (263) T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 9999999999998399869998997789999 No 107 >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional Probab=96.93 E-value=0.003 Score=40.68 Aligned_cols=106 Identities=26% Similarity=0.292 Sum_probs=64.8 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCCEEEE-----EH Q ss_conf 017977898404201010213576215772788999999982588389984156677--------65674675-----46 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPNVMTI-----HV 255 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~~~~i-----~v 255 (405) +|+||.+|||+|+ +-.|.++|+.+...||+|.+..-....+ ....+..+ .- T Consensus 12 ~L~gKvalVTGas----------------~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~ 75 (258) T PRK06935 12 SLKGKVAIVTGGN----------------TGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQLDLTKK 75 (258) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCH T ss_conf 9999989994857----------------589999999999879999997299789999999996699379999048999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH Q ss_conf 57789999998505-888799740444443222210112334557751045521806898 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK 314 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~ 314 (405) +..+++.+++.+.+ +.|++|..|.+....+-. + +.-.+....+.+.|.-.--+.+ T Consensus 76 ~~v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~~--~--~~~e~w~~~~~vNl~g~~~~~~ 131 (258) T PRK06935 76 ESAEAVVAEALEKFGKIDILVNNAGTIRRAPLL--E--YKDEDWQAVIDINLNSVYHLSQ 131 (258) T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHH T ss_conf 999999999999749999999899999999802--3--9999999999986478999999 No 108 >PRK07097 gluconate 5-dehydrogenase; Provisional Probab=96.92 E-value=0.0046 Score=39.50 Aligned_cols=157 Identities=22% Similarity=0.243 Sum_probs=85.4 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC------CCCCE-------EEEE Q ss_conf 0179778984042010102135762157727889999999825883899841566-77------65674-------6754 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA------DPPNV-------MTIH 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~------~~~~~-------~~i~ 254 (405) +|+||.+|||+| |+-.|.++|+.|...||+|.+....-. ++ ...+. ++-. T Consensus 7 ~l~gK~alVTG~----------------s~GIG~aiA~~la~~Ga~Vii~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~ 70 (265) T PRK07097 7 SLKGKIALITGA----------------SYGIGFAIAKAYAEAGATIVFNDIKQELVDKGLAAYRELGIEAHGYVCDVTD 70 (265) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCC T ss_conf 989998999585----------------7689999999999869999999599899999999999549917999932899 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH----HHHHHHCCCCCCEEEEE Q ss_conf 657789999998505-8887997404444432222101123345577510455218068----98876214899589998 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDI----LKIIGHHQCRPSIVVGF 329 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdI----L~~i~~~k~~~~~lVGF 329 (405) .+..+.+.+++.+.+ ..|++|.+|.+....+- .++.-+.....+.+.|.-.--+ +..+.+++ ...+|-+ T Consensus 71 ~~~v~~~~~~~~~~~g~iDiLVnNAG~~~~~~~----~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--~G~IVni 144 (265) T PRK07097 71 EDGIQAMVAQIEKEVGVIDILVNNAGIIRRIPM----LEMSAEDFRQVIDIDLNAPFIVSKAVLPSMIKKG--HGKIINI 144 (265) T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCH----HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCEEEEE T ss_conf 999999999999982999899989989999882----6599999999999860728999999999899808--9759999 Q ss_pred EC---CC--CHHHHHHHHH-----H-----HHCCCCEEEEECCCCCCCCCCCCCE Q ss_conf 11---41--2389999999-----9-----9749989999205776777776611 Q gi|254780622|r 330 AA---ET--QCIEQNAREK-----L-----LNKGADFIVSNCILPDTGFVGKEWN 369 (405) Q Consensus 330 ka---ET--~~l~~~A~~K-----l-----~~K~~D~IVAN~i~~~~~~fgsd~n 369 (405) .- .. .....++-.| | .+-.-+=|-.|.|.++ ++.++.. T Consensus 145 sS~~~~~~~~~~~~Y~asKaav~~ltr~lA~e~a~~gIrVN~V~PG--~i~T~~~ 197 (265) T PRK07097 145 CSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPG--YIATPQT 197 (265) T ss_pred ECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEC--CCCCCCC T ss_conf 0521156788866899999999999999999970249599999658--8988630 No 109 >PRK09134 short chain dehydrogenase; Provisional Probab=96.92 E-value=0.0044 Score=39.64 Aligned_cols=81 Identities=20% Similarity=0.221 Sum_probs=55.7 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCC--E-----EEE Q ss_conf 017977898404201010213576215772788999999982588389984156677--------6567--4-----675 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPN--V-----MTI 253 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~--~-----~~i 253 (405) .+++|.+|||+| |+-.|.++|+.|...|++|.+.+...... ...+ . .+- T Consensus 6 ~~~~KvalVTGa----------------s~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dl~ 69 (256) T PRK09134 6 MAAPRAALVTGA----------------ARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLA 69 (256) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 999997999488----------------6789999999999879989998499989999999999964991899975589 Q ss_pred EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 4657789999998505-8887997404444432 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) .-++.+++.+++.+.+ ..|++|.+|.+..+.+ T Consensus 70 ~~~~~~~~v~~~~~~~G~iDiLVnNAg~~~~~~ 102 (256) T PRK09134 70 DEAQVRALVARASAALGPITLLVNNASLFEYDS 102 (256) T ss_pred CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 999999999999998299878998871168997 No 110 >PRK07677 short chain dehydrogenase; Provisional Probab=96.91 E-value=0.004 Score=39.87 Aligned_cols=105 Identities=21% Similarity=0.253 Sum_probs=62.6 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCEEEE-----EH Q ss_conf 179778984042010102135762157727889999999825883899841566--------77-65674675-----46 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNVMTI-----HV 255 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~~~i-----~v 255 (405) |+||.+|||+| |+-.|.++|+++...||+|.+..-... +. ....+..+ .- T Consensus 1 L~gK~alVTGg----------------s~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~ 64 (254) T PRK07677 1 MKEKVVIITGG----------------SSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNP 64 (254) T ss_pred CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCH T ss_conf 95298999587----------------67899999999998799999996999999999999985699099998038999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH Q ss_conf 57789999998505-888799740444443222210112334557751045521806898 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK 314 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~ 314 (405) ++.+++.+++.+.+ ..|++|.+|+..-..+.. ++.-......+.+.|.-+--+.+ T Consensus 65 ~~v~~~v~~~~~~~g~iDiLVnNAg~~~~~~~~----~~t~~~~~~~~~vnl~g~~~~~~ 120 (254) T PRK07677 65 DDVQKMIEQIDEKFGRIDALINNAAGNFICPAE----DLSVNGWKSVIDIVLNGTFYCSQ 120 (254) T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHH T ss_conf 999999999999839988899757557788826----59999999999997231889999 No 111 >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=96.91 E-value=0.0031 Score=40.61 Aligned_cols=82 Identities=26% Similarity=0.268 Sum_probs=55.1 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC----CCCCCEEEE-----EHHHH Q ss_conf 001797789840420101021357621577278899999998258838998415667----765674675-----46577 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI----ADPPNVMTI-----HVERA 258 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~----~~~~~~~~i-----~v~t~ 258 (405) ..|+||.+|||+|. +-.|.++|+.|...||+|.+....... ....+...+ .-+.. T Consensus 3 grL~gKvalVTGas----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v 66 (254) T PRK06463 3 GKFKGKVALITGGS----------------RGIGRAIAEKFLKEGAKVAILYNSSEDKAKELKEKGVETFKCDVSNRDQV 66 (254) T ss_pred CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCHHHH T ss_conf 75698989994847----------------78999999999988999999649978999999866988999738999999 Q ss_pred HHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 89999998505-8887997404444432 Q gi|254780622|r 259 EDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 259 ~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) +++.+++.+.+ ..|++|.+|.+....| T Consensus 67 ~~~v~~~~~~~G~iDiLVNNAG~~~~~~ 94 (254) T PRK06463 67 RKAKEEIHKKLGRIDVLVNNAGIWYLMP 94 (254) T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 9999999998299989998997789999 No 112 >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=96.91 E-value=0.0037 Score=40.14 Aligned_cols=76 Identities=21% Similarity=0.205 Sum_probs=47.6 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-------CCCCCE-----EEEEHH Q ss_conf 01797789840420101021357621577278899999998258838998415667-------765674-----675465 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-------ADPPNV-----MTIHVE 256 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-------~~~~~~-----~~i~v~ 256 (405) +|+||.+|||+| |+-.|.++|+.+...||+|.+....... +..... .+-..+ T Consensus 3 ~L~gK~alVTGa----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~ 66 (254) T PRK08642 3 DISEQIVLVTGG----------------SRGLGAAIARAFAREGARVVVNYHRSEDAAEALADELGDRAIAIQADVTDRN 66 (254) T ss_pred CCCCCEEEEECH----------------HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCHH T ss_conf 989899999781----------------1199999999999879999996189889999999981994699980699999 Q ss_pred HHHHHHHHHHHCC--CCCEEEEEHHH Q ss_conf 7789999998505--88879974044 Q gi|254780622|r 257 RAEDMLQEVLKAL--PVDIAVMVSAV 280 (405) Q Consensus 257 t~~em~~~~~~~~--~~D~~I~aAAV 280 (405) ..++|.+.+.+.+ +.|++|.+|.+ T Consensus 67 ~~~~~v~~~~~~~G~~idilVnnA~~ 92 (254) T PRK08642 67 QVDAMFATATEHFGKPITTVVNNALA 92 (254) T ss_pred HHHHHHHHHHHHHCCCCEEEEECCEE T ss_conf 99999999999949977699867642 No 113 >PRK07041 short chain dehydrogenase; Provisional Probab=96.89 E-value=0.0059 Score=38.81 Aligned_cols=32 Identities=28% Similarity=0.370 Sum_probs=12.9 Q ss_pred CCCCCCEEEE-EEECHHHHHHHHHHHHHHHHCCCEEE Q ss_conf 9888556999-95284789999999999998798899 Q gi|254780622|r 1 MDLSGKKIAL-IMCGSVAVYKSLDLIRRLRERGAVVI 36 (405) Q Consensus 1 m~l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g~~V~ 36 (405) |+|+||++++ |-+++| -..+++.|.++|++|. T Consensus 3 ~~l~gK~~lITGgs~GI----G~aia~~la~~Ga~V~ 35 (240) T PRK07041 3 MSLNDQKVLVVGGSSGI----GLAAARAFAARGADVT 35 (240) T ss_pred CCCCCCEEEEECCCCHH----HHHHHHHHHHCCCEEE T ss_conf 88599989995778889----9999999998799999 No 114 >PRK06139 short chain dehydrogenase; Provisional Probab=96.88 E-value=0.0041 Score=39.79 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=22.1 Q ss_pred CC-CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEE Q ss_conf 98-8855699995284789999999999998798899985 Q gi|254780622|r 1 MD-LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVM 39 (405) Q Consensus 1 m~-l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~ 39 (405) |. |+||.++ |||+-+-+ --.+++.|-++|+.|.++- T Consensus 1 Mg~L~gKvvl--ITGASsGI-G~aiA~~~A~~Ga~Vvl~~ 37 (324) T PRK06139 1 MGPLHGAVVV--ITGASSGI-GRATAEAFARRGARLVLAA 37 (324) T ss_pred CCCCCCCEEE--EECHHHHH-HHHHHHHHHHCCCEEEEEE T ss_conf 9985997799--93825499-9999999998799899998 No 115 >PRK05717 oxidoreductase; Validated Probab=96.88 E-value=0.0071 Score=38.30 Aligned_cols=109 Identities=21% Similarity=0.156 Sum_probs=64.3 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-------CCCCCCEE--EEEH--- Q ss_conf 00179778984042010102135762157727889999999825883899841566-------77656746--7546--- Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-------IADPPNVM--TIHV--- 255 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-------~~~~~~~~--~i~v--- 255 (405) ..|.||.+|||+| ||-.|.++|+.|...||+|.+. +.-. ........ ...| T Consensus 6 ~~l~GKvalITG~----------------s~GIG~aia~~la~~Ga~V~i~-~~~~~~~~~~~~~~~~~~~~~~~Dvt~~ 68 (255) T PRK05717 6 PGHNGRVALVTGA----------------ARGIGLGIAAWLIAEGWQVVLA-DLDRERGAKVAKALGENAWFIAMDVADE 68 (255) T ss_pred CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEE-ECCHHHHHHHHHHHCCCEEEEEEECCCH T ss_conf 8999988999587----------------8889999999999879989999-6988999999998489758999307999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH Q ss_conf 57789999998505-8887997404444432222101123345577510455218068988 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI 315 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~ 315 (405) ++.+++.+++.+.+ ..|++|..|++.+..-... .++.-.+....+.+.|.-.--+.+. T Consensus 69 ~~v~~~i~~~~~~~G~id~lvnNAg~~~~~~~~l--~~~~~~~w~~~~~vNl~g~f~~~k~ 127 (255) T PRK05717 69 AQVAAGVAEVLGQFGRLDALVCNAAIANPHNTTL--ESLSLAQWNRVLAVNLGGPMLLAKH 127 (255) T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCH--HHCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 9999999999998299989998773057899983--5599999999999860426577664 No 116 >PRK08263 short chain dehydrogenase; Provisional Probab=96.88 E-value=0.0049 Score=39.32 Aligned_cols=50 Identities=22% Similarity=0.279 Sum_probs=32.7 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHHHH-----HHHHHHHHCCCCEEEEE-CCCC Q ss_conf 79778984042010102135762157727889-----99999982588389984-1566 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGH-----AIAKSLAYFGAEVILIS-GPVS 243 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~-----~iA~~~~~~Ga~V~li~-g~~~ 243 (405) .|.=|.|+|.+...+ .-..+-.+.-|-+. .||.|+...|-.|+.|+ |++. T Consensus 128 ~G~IvnisS~ag~~~---~p~~~~Y~ASK~Al~~lt~sLa~El~~~gIrVn~V~PG~v~ 183 (275) T PRK08263 128 SGHIIQISSIGGISA---FPMVGIYHASKWALEGFSEALAQEVAHFGIKVTLVEPGGYS 183 (275) T ss_pred CCEEEEECCHHHCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC T ss_conf 977999457010567---99970799999999999999999840339689999708875 No 117 >PRK12937 short chain dehydrogenase; Provisional Probab=96.88 E-value=0.0043 Score=39.67 Aligned_cols=122 Identities=19% Similarity=0.232 Sum_probs=66.6 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC---------C-CCCCEEEE----- Q ss_conf 01797789840420101021357621577278899999998258838998415667---------7-65674675----- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI---------A-DPPNVMTI----- 253 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~---------~-~~~~~~~i----- 253 (405) .+.||.+|||+|. +| .|.++|+.|...||+|.+....... . ....+..+ T Consensus 2 ~~sgK~alVTGgs---------------~G-IG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 65 (245) T PRK12937 2 TDSNKVAIVTGAS---------------RG-IGAAIARRLAADGFAVAVNYAGSAAMADELVEEIEAAGGRAIAVQADVA 65 (245) T ss_pred CCCCCEEEEECCC---------------CH-HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 9999889994857---------------78-9999999999879999997699868999999999965995899983789 Q ss_pred EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEE Q ss_conf 4657789999998505-8887997404444432222101123345577510455218068988762148995899981 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFA 330 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFk 330 (405) +-+..+.+.+.+.+.+ ..|++|.+|.+....+ ..+. .-+++...+.+.|.-.--+.+...++-.....+|-+. T Consensus 66 ~~~~~~~~v~~~~~~~g~iDilVnNAg~~~~~~--~~~~--~~e~w~~~~~vNl~~~~~~~~~~~~~m~~~G~IInis 139 (245) T PRK12937 66 DAAAVDRLFEAAETAFGRIDVLVNSAGIMPLAP--IADG--DLEGFDRTIAVNLRGAFNVLGEAARHLRRGGRIINLS 139 (245) T ss_pred CHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC--HHHC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE T ss_conf 999999999999998199889998054899988--1349--9999999999985999999999999997288299997 No 118 >PRK06949 short chain dehydrogenase; Provisional Probab=96.87 E-value=0.0029 Score=40.78 Aligned_cols=83 Identities=28% Similarity=0.309 Sum_probs=53.7 Q ss_pred CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCEEEE---- Q ss_conf 200179778984042010102135762157727889999999825883899841566--------77-65674675---- Q gi|254780622|r 187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNVMTI---- 253 (405) Q Consensus 187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~~~i---- 253 (405) ..+|+||.+|||+|+ +=.|.++|+.+.+.||+|.+..-... +. .......+ T Consensus 4 ~~~L~gKvalVTGas----------------~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv 67 (258) T PRK06949 4 SINLEGKVALVTGAS----------------SGLGQRFAQVLSQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDV 67 (258) T ss_pred CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCC T ss_conf 887899989995857----------------7999999999998799999996988999999999996599289998268 Q ss_pred -EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf -4657789999998505-8887997404444432 Q gi|254780622|r 254 -HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 254 -~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) +-++.+.+.+++.+.+ ..|++|.+|+++-+.+ T Consensus 68 ~~~~~v~~~v~~~~~~~G~iDiLVnnAG~~~~~~ 101 (258) T PRK06949 68 TDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQK 101 (258) T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 9999999999999998499989998998899989 No 119 >PRK08278 short chain dehydrogenase; Provisional Probab=96.87 E-value=0.0046 Score=39.49 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=17.9 Q ss_pred CCCCCCEEEE-EEECHHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 9888556999-9528478999999999999879889998 Q gi|254780622|r 1 MDLSGKKIAL-IMCGSVAVYKSLDLIRRLRERGAVVIPV 38 (405) Q Consensus 1 m~l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g~~V~vv 38 (405) |+|+||.+++ |-+++| -..+++.|-++|++|.+. T Consensus 2 m~L~gKvalVTGas~GI----G~aiA~~la~~Ga~Vvi~ 36 (273) T PRK08278 2 MSLSGKTLFITGASRGI----GLAIALRAARDGANIVIA 36 (273) T ss_pred CCCCCCEEEEECCCCHH----HHHHHHHHHHCCCEEEEE T ss_conf 89899989994876599----999999999879989999 No 120 >PRK08862 short chain dehydrogenase; Provisional Probab=96.87 E-value=0.0056 Score=38.94 Aligned_cols=17 Identities=29% Similarity=0.202 Sum_probs=9.1 Q ss_pred HHHHHHHHCCCCEEEEE Q ss_conf 99999982588389984 Q gi|254780622|r 223 AIAKSLAYFGAEVILIS 239 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~ 239 (405) .+|.|+..+|-.|..|+ T Consensus 167 slA~Ela~~gIRVNaVa 183 (227) T PRK08862 167 SWAKELTPFNIRVGGVV 183 (227) T ss_pred HHHHHHHHHCCEEEEEE T ss_conf 99999767498999994 No 121 >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=96.87 E-value=0.005 Score=39.24 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=17.4 Q ss_pred CCCCCCEEEE-EEECHHHHHHHHHHHHHHHHCCCEEEE Q ss_conf 9888556999-952847899999999999987988999 Q gi|254780622|r 1 MDLSGKKIAL-IMCGSVAVYKSLDLIRRLRERGAVVIP 37 (405) Q Consensus 1 m~l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g~~V~v 37 (405) |.|+||++++ |-+++|- ..+++.|.++|++|.+ T Consensus 1 m~l~gK~~lVTGas~GIG----~aiA~~la~~Ga~V~i 34 (238) T PRK05786 1 MRLKGKNVLIVGVSPGLG----YAVAYFALREGASVYA 34 (238) T ss_pred CCCCCCEEEEECCCCHHH----HHHHHHHHHCCCEEEE T ss_conf 987998899928987899----9999999987999999 No 122 >PRK05876 short chain dehydrogenase; Provisional Probab=96.86 E-value=0.0041 Score=39.82 Aligned_cols=81 Identities=23% Similarity=0.262 Sum_probs=51.3 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC-------CCCCCCCEE--EE--EH-- Q ss_conf 017977898404201010213576215772788999999982588389984156-------677656746--75--46-- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV-------SIADPPNVM--TI--HV-- 255 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~-------~~~~~~~~~--~i--~v-- 255 (405) +|+||.++||+|+ || .|.++|+.|..+|++|.+..-.. ......+.+ .+ .| T Consensus 3 ~~~gKvavITGaa---------------sG-IG~a~A~~la~~Ga~Vvi~d~~~~~l~~~~~~l~~~g~~~~~~~~Dvt~ 66 (275) T PRK05876 3 GFPGRGAVITGGA---------------SG-IGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH 66 (275) T ss_pred CCCCCEEEEECCC---------------CH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 9899879992826---------------69-9999999999879989999798899999999998269847999788899 Q ss_pred -HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf -57789999998505-8887997404444432 Q gi|254780622|r 256 -ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 256 -~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) +..+.+.+++.+.+ +.|++|..|.+....+ T Consensus 67 ~~~v~~l~~~~~~~~G~iDilvnNAGi~~~~~ 98 (275) T PRK05876 67 REEVTHLADEAFRLLGHVDVVFSNAGIVVGGP 98 (275) T ss_pred HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCC T ss_conf 99999999999998489885121574468987 No 123 >PRK07890 short chain dehydrogenase; Provisional Probab=96.85 E-value=0.0062 Score=38.68 Aligned_cols=33 Identities=33% Similarity=0.342 Sum_probs=17.5 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 1797789840420101021357621577278899999998258838998 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI 238 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li 238 (405) |+||.+|||+|. +-.|.++|+.+...||+|.+. T Consensus 3 L~gK~alVTG~s----------------~GIG~aia~~la~~Ga~V~i~ 35 (258) T PRK07890 3 LKDKVVVVSGVG----------------PGLGTTLAVRAAREGADVVLA 35 (258) T ss_pred CCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEE T ss_conf 899889996856----------------589999999999879989999 No 124 >PRK07326 short chain dehydrogenase; Provisional Probab=96.85 E-value=0.0055 Score=39.00 Aligned_cols=81 Identities=27% Similarity=0.325 Sum_probs=51.9 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C-CCCCEEEE-----EHHH Q ss_conf 179778984042010102135762157727889999999825883899841566-7-----7-65674675-----4657 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A-DPPNVMTI-----HVER 257 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~-~~~~~~~i-----~v~t 257 (405) +.||.+|||+|. +=.|.++|+.|..+||+|.+..-... + + ...++..+ +.+. T Consensus 3 ~~GKvalITGas----------------~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~~~~~~~~Dv~d~~~ 66 (235) T PRK07326 3 GNGKAALVTGGS----------------KGIGFAVAEALAAAGYRVAICARDESELEAAAQELGKRNVLGLACDVRDEAD 66 (235) T ss_pred CCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCHHH T ss_conf 999899993826----------------7999999999998799999998988999999998423986999963899999 Q ss_pred HHHHHHHHHHCC-CCCEEEEEHHHHHHHHH Q ss_conf 789999998505-88879974044444322 Q gi|254780622|r 258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRFP 286 (405) Q Consensus 258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~~ 286 (405) .+.+.+.+.+.+ ..|++|.+|.+..+.+- T Consensus 67 v~~~v~~~~~~~G~iDiLVNNAGi~~~~~~ 96 (235) T PRK07326 67 VRQAVDAHVEAFGGLDILVNNAGVGHFAPV 96 (235) T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCH T ss_conf 999999999982996699988877899882 No 125 >PRK07062 short chain dehydrogenase; Provisional Probab=96.84 E-value=0.0052 Score=39.17 Aligned_cols=108 Identities=17% Similarity=0.138 Sum_probs=62.6 Q ss_pred CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC----------CCC-CCCEEEE-- Q ss_conf 200179778984042010102135762157727889999999825883899841566----------776-5674675-- Q gi|254780622|r 187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS----------IAD-PPNVMTI-- 253 (405) Q Consensus 187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~----------~~~-~~~~~~i-- 253 (405) +.+|+||.+|||+|. +=+|.++|+.|...||+|.+..-... ... ...+..+ T Consensus 3 ~~~L~gK~alITG~s----------------~GIG~a~a~~la~~Ga~Vvi~~r~~~~l~~~~~~l~~~~~~~~~~~~~~ 66 (265) T PRK07062 3 QIQLEGRVAVVTGGS----------------SGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARC 66 (265) T ss_pred CCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEC T ss_conf 778899989995757----------------7999999999998799999997988999999999987369965999975 Q ss_pred ---EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH Q ss_conf ---4657789999998505-888799740444443222210112334557751045521806898 Q gi|254780622|r 254 ---HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK 314 (405) Q Consensus 254 ---~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~ 314 (405) .-+..+.+.+++.+.+ ..|++|.+|......+- .+ ..-.+..+.+.+.|.-.--..+ T Consensus 67 Dvt~~~~v~~~v~~~~~~~G~iDiLVnNAg~~~~~~~--~~--~~~e~w~~~~~~nl~~~~~~~~ 127 (265) T PRK07062 67 DVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTF--AD--TTDDAWRDELELKYFSVIRPTR 127 (265) T ss_pred CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH--HH--CCHHHHHHHHHHHHHHHHHHHH T ss_conf 7999999999999999983998889977888898884--87--9999999999872145899999 No 126 >KOG1201 consensus Probab=96.83 E-value=0.0049 Score=39.33 Aligned_cols=190 Identities=21% Similarity=0.187 Sum_probs=98.7 Q ss_pred HHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC--CCCCC---CC---CE Q ss_conf 986310132001797789840420101021357621577278899999998258838998415--66776---56---74 Q gi|254780622|r 179 TWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP--VSIAD---PP---NV 250 (405) Q Consensus 179 ~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~--~~~~~---~~---~~ 250 (405) ...+...+..+.+|+.||||+|| +=.|.++|.++.+||+.+.+.-=. ...+. .. .+ T Consensus 25 ~~~~l~~~~k~v~g~~vLITGgg----------------~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~ 88 (300) T KOG1201 25 IKLLLPKPLKSVSGEIVLITGGG----------------SGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEA 88 (300) T ss_pred HHHHCCCCHHHCCCCEEEEECCC----------------CHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCE T ss_conf 98755543344069889996898----------------60789999999970784899955651239999999844852 Q ss_pred EEE--EHHHHHH---HHHHHHHCC-CCCEEEEEHHHHHHHHHH-HHHCCCCCCCCCCCCEEEEEE----CHHHHHHHHHC Q ss_conf 675--4657789---999998505-888799740444443222-210112334557751045521----80689887621 Q gi|254780622|r 251 MTI--HVERAED---MLQEVLKAL-PVDIAVMVSAVSDWRFPK-IAGTKIKRKDIGDTMRIDLME----NPDILKIIGHH 319 (405) Q Consensus 251 ~~i--~v~t~~e---m~~~~~~~~-~~D~~I~aAAVSDf~~~~-~~~~Kikk~s~~~~l~L~L~~----~pdIL~~i~~~ 319 (405) +.+ ++..-+| +.+++.++. +.|++|-.|+|.-.+.-- .++..+.| .+.+.+.- +.-.|-.+-++ T Consensus 89 ~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k-----~~~vN~~~~f~t~kaFLP~M~~~ 163 (300) T KOG1201 89 KAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQK-----TFDVNTIAHFWTTKAFLPKMLEN 163 (300) T ss_pred EEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHC T ss_conf 5899558988999999999998619954998366424488756799899999-----99876689999999873888745 Q ss_pred CCCCCEEEEEE--C-CC---C------------HHHHHHHHHHHHCCCCEE-----EEECCCCCCCCCCCCCEEEEEECC Q ss_conf 48995899981--1-41---2------------389999999997499899-----992057767777766118999836 Q gi|254780622|r 320 QCRPSIVVGFA--A-ET---Q------------CIEQNAREKLLNKGADFI-----VSNCILPDTGFVGKEWNKVSIVFP 376 (405) Q Consensus 320 k~~~~~lVGFk--a-ET---~------------~l~~~A~~Kl~~K~~D~I-----VAN~i~~~~~~fgsd~n~v~li~~ 376 (405) ++..+|--+ | .. + -..+-...-++..++|-| +...+. .+.|.. .. T Consensus 164 --~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~--Tgmf~~--------~~ 231 (300) T KOG1201 164 --NNGHIVTIASVAGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN--TGMFDG--------AT 231 (300) T ss_pred --CCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC--CCCCCC--------CC T ss_conf --796399835533135776532356518999999999999998538987269998432213--554478--------98 Q ss_pred CCEEECCCCCHHHHHHHHHHHHHHH Q ss_conf 9859727899899999999999998 Q gi|254780622|r 377 DKIEEYPELPKAEVADRLCHLIVEH 401 (405) Q Consensus 377 ~~~~~~~~~sK~~iA~~Il~~i~~~ 401 (405) ....-+|..+=+.+|++|++.+..+ T Consensus 232 ~~~~l~P~L~p~~va~~Iv~ai~~n 256 (300) T KOG1201 232 PFPTLAPLLEPEYVAKRIVEAILTN 256 (300) T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCC T ss_conf 8864368779799999999999819 No 127 >PRK06125 short chain dehydrogenase; Provisional Probab=96.81 E-value=0.0069 Score=38.38 Aligned_cols=35 Identities=34% Similarity=0.480 Sum_probs=22.7 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 017977898404201010213576215772788999999982588389984 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~ 239 (405) +|+||++|||+|. +=+|.++|+.|...||+|.+.. T Consensus 4 ~l~gK~alITG~s----------------~GIG~aiA~~la~~Ga~V~i~~ 38 (259) T PRK06125 4 HLAGKRVLITGAS----------------KGIGAAAAEAFAAEGCHLVLAA 38 (259) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEE T ss_conf 8699989996877----------------6899999999998799899997 No 128 >TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. Probab=96.81 E-value=0.0021 Score=41.75 Aligned_cols=28 Identities=29% Similarity=0.266 Sum_probs=20.2 Q ss_pred EEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 99528478999999999999879889998585 Q gi|254780622|r 10 LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) .|-||=| .-.|+++|.+.|++|+++.-. T Consensus 6 TGgtGfi----G~~l~~~L~~~G~~V~~l~r~ 33 (328) T TIGR03466 6 TGATGFV----GSAVVRLLLERGEEVRVLVRP 33 (328) T ss_pred ECCCCHH----HHHHHHHHHHCCCEEEEEECC T ss_conf 8677799----999999999784989999899 No 129 >PRK06172 short chain dehydrogenase; Provisional Probab=96.81 E-value=0.0058 Score=38.84 Aligned_cols=103 Identities=18% Similarity=0.221 Sum_probs=60.6 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C--------CCCCCEEEE----- Q ss_conf 00179778984042010102135762157727889999999825883899841566-7--------765674675----- Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I--------ADPPNVMTI----- 253 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~--------~~~~~~~~i----- 253 (405) .+|+||.+|||+| |+=.|.++|+.|...||+|.+..-... . .....+..+ T Consensus 3 ~~L~gKvalVTGa----------------s~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs 66 (253) T PRK06172 3 MTFSGQVALVTGG----------------AAGIGRATAIAFAREGAKVVVADRDAAGGEETVALIREAGGEALFIACDVT 66 (253) T ss_pred CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 8869998999375----------------768999999999987998999979889999999999964993799981899 Q ss_pred EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC Q ss_conf 4657789999998505-8887997404444432222101123345577510455218 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN 309 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~ 309 (405) +-+..+++.+++.+.+ ..|++|.+|++.....+ ..+ +.-+++...+.+.|.-. T Consensus 67 ~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~-~~~--~~~e~w~~~~~vNl~g~ 120 (253) T PRK06172 67 RDAEVKALVEKTIAAYGRLDYAFNNAGIEIEQGR-LAE--GSEAEFDAIMGVNVKGV 120 (253) T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC-CHH--CCHHHHHHHHHHHHHHH T ss_conf 9999999999999982999999989888999999-013--99999999999973999 No 130 >PRK08324 short chain dehydrogenase; Validated Probab=96.81 E-value=0.008 Score=37.95 Aligned_cols=109 Identities=23% Similarity=0.177 Sum_probs=66.3 Q ss_pred CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC--------CCCCCCCE-----EE Q ss_conf 320017977898404201010213576215772788999999982588389984156--------67765674-----67 Q gi|254780622|r 186 KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV--------SIADPPNV-----MT 252 (405) Q Consensus 186 ~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~--------~~~~~~~~-----~~ 252 (405) ++..|.||-+|||+| +|-.|.++|+.+...||.|.+.--.. .+.....+ .+ T Consensus 415 ~~~~L~GKVALVTGg----------------a~GIG~A~A~~fa~eGA~Vvl~D~~~~~l~~~a~el~~~~~~~~~~~DV 478 (676) T PRK08324 415 KPKPLAGKVALVTGA----------------AGGIGLATAKRLAAEGACVVLADIDEEAAEAAAAELGGRDRALGVACDV 478 (676) T ss_pred CCCCCCCCEEEEECC----------------CCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECC T ss_conf 998889987999479----------------8816299999999879989999588899999999970799479998068 Q ss_pred EEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH Q ss_conf 54657789999998505-888799740444443222210112334557751045521806898 Q gi|254780622|r 253 IHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK 314 (405) Q Consensus 253 i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~ 314 (405) ..-.+.+.+.+++.+.+ ..|++|.+|.++...+-. .+.-......+.+.|.-.--+.+ T Consensus 479 td~~~v~~~v~~~~~~fGgIDiLVnNAGi~~~~~~~----e~s~e~w~~~~~vNl~g~f~~~r 537 (676) T PRK08324 479 TDEAAVQAAFEEAALAFGGVDIVVSNAGIALSGPIG----ETSDELWRRSFEVNFTGHFLVAR 537 (676) T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH----HCCHHHHHHHHHHHHHHHHHHHH T ss_conf 999999999999999859988899767778998826----59999999999886099999999 No 131 >PRK08265 short chain dehydrogenase; Provisional Probab=96.80 E-value=0.0078 Score=38.03 Aligned_cols=77 Identities=25% Similarity=0.245 Sum_probs=45.6 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEE-----EHHH Q ss_conf 0179778984042010102135762157727889999999825883899841566------7765674675-----4657 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPPNVMTI-----HVER 257 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~~i-----~v~t 257 (405) +|+||.+|||+|. +-.|.++|+.+...||+|.+..-... .........+ .-+. T Consensus 3 ~L~gKvalVTGgs----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 66 (261) T PRK08265 3 GLAGKVAIVTGGA----------------TLIGAAVARALVAAGACVAILDIDADNGAAVAASLGERARFIATDITDDAA 66 (261) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEECCCCCHHH T ss_conf 9999989994877----------------689999999999879989999798899999999819972899813899999 Q ss_pred HHHHHHHHHHCC-CCCEEEEEHHHH Q ss_conf 789999998505-888799740444 Q gi|254780622|r 258 AEDMLQEVLKAL-PVDIAVMVSAVS 281 (405) Q Consensus 258 ~~em~~~~~~~~-~~D~~I~aAAVS 281 (405) .+++.+.+.+.+ ..|++|.+|+.. T Consensus 67 i~~~~~~~~~~fG~iDiLVNNAg~~ 91 (261) T PRK08265 67 IERAVATAVARFGGLDILVNLACTY 91 (261) T ss_pred HHHHHHHHHHHHCCCCEEEECCCCC T ss_conf 9999999999819987899857557 No 132 >PRK07576 short chain dehydrogenase; Provisional Probab=96.79 E-value=0.0065 Score=38.53 Aligned_cols=20 Identities=30% Similarity=0.316 Sum_probs=9.7 Q ss_pred HHHHHHHHHHHHCCCCEEEE Q ss_conf 78899999998258838998 Q gi|254780622|r 219 QQGHAIAKSLAYFGAEVILI 238 (405) Q Consensus 219 k~G~~iA~~~~~~Ga~V~li 238 (405) -.|.++|+.+...||+|.+. T Consensus 19 GIG~aia~~la~~Ga~V~i~ 38 (260) T PRK07576 19 GINLGIAQAFARAGANVAVA 38 (260) T ss_pred HHHHHHHHHHHHCCCEEEEE T ss_conf 99999999999879999999 No 133 >PRK12935 acetoacetyl-CoA reductase; Provisional Probab=96.78 E-value=0.0055 Score=39.00 Aligned_cols=81 Identities=31% Similarity=0.391 Sum_probs=48.7 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--C------CCCC--EEEE----- Q ss_conf 01797789840420101021357621577278899999998258838998415667--7------6567--4675----- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--A------DPPN--VMTI----- 253 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--~------~~~~--~~~i----- 253 (405) +|+||.+|||+|+ +-.|.++|+.|...||+|.+-...... + ...+ +..+ T Consensus 3 ~L~gKvalVTG~s----------------~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs 66 (247) T PRK12935 3 QLNGKVAIVTGGA----------------KGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVS 66 (247) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 8896989991727----------------689999999999879989997699989999999999843995899985799 Q ss_pred EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 4657789999998505-8887997404444432 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) ..+..+++.+++.+.+ +.|++|.+|.+....+ T Consensus 67 ~~~~~~~~v~~~~~~~G~iDiLVNNAGi~~~~~ 99 (247) T PRK12935 67 KVEDANRLVEEAVNHFGKVDILVNNAGITRDRT 99 (247) T ss_pred CHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC T ss_conf 999999999999998399989998998899999 No 134 >PRK08339 short chain dehydrogenase; Provisional Probab=96.78 E-value=0.0099 Score=37.37 Aligned_cols=33 Identities=33% Similarity=0.378 Sum_probs=14.3 Q ss_pred CCCCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEE Q ss_conf 988855699-9952847899999999999987988999 Q gi|254780622|r 1 MDLSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIP 37 (405) Q Consensus 1 m~l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~v 37 (405) |+|+||.++ -|-+++| -..+++.|-+.|++|.+ T Consensus 4 l~L~gK~alITG~s~GI----G~aiA~~la~~Ga~V~i 37 (263) T PRK08339 4 IDLSGKLAFTTASSKGI----GFGVARVLARAGADVII 37 (263) T ss_pred CCCCCCEEEEECCCCHH----HHHHHHHHHHCCCEEEE T ss_conf 17899989991626099----99999999986999999 No 135 >PRK07063 short chain dehydrogenase; Provisional Probab=96.78 E-value=0.006 Score=38.78 Aligned_cols=106 Identities=25% Similarity=0.307 Sum_probs=63.7 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC--CCCCEEEE----- Q ss_conf 0179778984042010102135762157727889999999825883899841566--------77--65674675----- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA--DPPNVMTI----- 253 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~--~~~~~~~i----- 253 (405) .|+||.+|||+|+. =.|.++|+.|...||+|.+..-... +. ....+..+ T Consensus 4 rL~gKvalVTGa~~----------------GIG~aiA~~~a~~Ga~V~i~~~~~~~~~~~~~~l~~~~g~~~~~~~~Dvt 67 (259) T PRK07063 4 RLAGKVALVTGAAQ----------------GIGAAIARAFVREGAAVALADLDAALAERAAAAIARQTGARVLALPADVT 67 (259) T ss_pred CCCCCEEEEECCCC----------------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCC T ss_conf 35998899958787----------------89999999999879989999798789999999998850991899983689 Q ss_pred EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH Q ss_conf 4657789999998505-888799740444443222210112334557751045521806898 Q gi|254780622|r 254 HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK 314 (405) Q Consensus 254 ~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~ 314 (405) +-+..+++.+++.+.+ ..|++|-+|.++.+.+.. + ..-.++...+.+.|.-.--..+ T Consensus 68 ~~~~v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~~--~--~~~e~w~~~~~vNl~g~f~~~~ 125 (259) T PRK07063 68 RAASVRAAVARAEAAFGPLDVLVNNAGINVFADPL--A--MTDEDWRRCFAVDLDGAWNCCR 125 (259) T ss_pred CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999999999819988999899778999904--4--9999999999875288999999 No 136 >PRK06057 short chain dehydrogenase; Provisional Probab=96.76 E-value=0.0078 Score=38.01 Aligned_cols=79 Identities=22% Similarity=0.246 Sum_probs=51.5 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-----CCCCCC----EEEEEHHHH Q ss_conf 00179778984042010102135762157727889999999825883899841566-----776567----467546577 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-----IADPPN----VMTIHVERA 258 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-----~~~~~~----~~~i~v~t~ 258 (405) +.|+||.+|||+|+ +=.|.++|+.+...||+|.+..-... ...... ..+-.-+.. T Consensus 3 ~rL~gKvalVTGas----------------~GIG~aia~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 66 (255) T PRK06057 3 QRLAGRVAVITGGA----------------SGIGLATARRMRAEGATVVVGDIDPEAGKAAADELGGLFVQVDVTDEDAV 66 (255) T ss_pred CCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEEEECCCHHHH T ss_conf 88899989996848----------------88999999999986998999969889999999864997999816999999 Q ss_pred HHHHHHHHHCC-CCCEEEEEHHHHH Q ss_conf 89999998505-8887997404444 Q gi|254780622|r 259 EDMLQEVLKAL-PVDIAVMVSAVSD 282 (405) Q Consensus 259 ~em~~~~~~~~-~~D~~I~aAAVSD 282 (405) +++.+++.+.+ ..|++|.+|.++. T Consensus 67 ~~~v~~~~~~~G~iDiLVNnAGi~~ 91 (255) T PRK06057 67 NALFDTAAETYGSVDIAFNNAGISP 91 (255) T ss_pred HHHHHHHHHHHCCCCEEEECCCCCC T ss_conf 9999999998199878998885578 No 137 >PRK06227 consensus Probab=96.76 E-value=0.0064 Score=38.58 Aligned_cols=102 Identities=21% Similarity=0.241 Sum_probs=61.1 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----C--CCCCEE--EE-----E Q ss_conf 01797789840420101021357621577278899999998258838998415667-----7--656746--75-----4 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-----A--DPPNVM--TI-----H 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-----~--~~~~~~--~i-----~ 254 (405) +|+||.+|||+|+ + =.|.++|+.+...||+|.+..-.... . ...+.+ .+ . T Consensus 2 ~L~gKvalVTGas---------------~-GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~ 65 (256) T PRK06227 2 NLSGKVAIVTGGG---------------Q-GIGAAIAQTFAENGAKVVIADIDEEAGLEREEMLRSNGLDALFVKTDVSD 65 (256) T ss_pred CCCCCEEEEECCC---------------C-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 8999889995866---------------8-89999999999879999999698889999999999559918999816899 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH Q ss_conf 657789999998505-88879974044444322221011233455775104552180 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP 310 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p 310 (405) -+..+.+.+++.+.+ ..|++|-+|.+..+.+-. + +.-.++...+.+.|.-+- T Consensus 66 ~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~--~--~~~e~w~~~~~vNl~g~f 118 (256) T PRK06227 66 EEDVKNMVRKTVERYGGIDILINNAGIFSGKSIF--E--RTLEEWERVIRVNLTGPY 118 (256) T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH--H--CCHHHHHHHHHHHHHHHH T ss_conf 9999999999999829997999899899998903--4--989999999999829999 No 138 >PRK07806 short chain dehydrogenase; Provisional Probab=96.75 E-value=0.0072 Score=38.25 Aligned_cols=18 Identities=28% Similarity=0.408 Sum_probs=10.3 Q ss_pred HHHHHHHHHCCCCEEEEE Q ss_conf 999999982588389984 Q gi|254780622|r 222 HAIAKSLAYFGAEVILIS 239 (405) Q Consensus 222 ~~iA~~~~~~Ga~V~li~ 239 (405) ..+|.++..+|-.|..|+ T Consensus 165 ~~la~ela~~gIrvn~v~ 182 (248) T PRK07806 165 RALRPELAHAGIGFVVVS 182 (248) T ss_pred HHHHHHHHHHCCEEEEEE T ss_conf 999999776598899972 No 139 >PRK07109 short chain dehydrogenase; Provisional Probab=96.73 E-value=0.0076 Score=38.09 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=20.3 Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 888556999952847899999999999987988999858 Q gi|254780622|r 2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT 40 (405) Q Consensus 2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T 40 (405) .|+||.|+ |||+-+-+ .-.+++.|-+.|+.|.++-- T Consensus 5 ~l~~KvVv--ITGASsGI-Gra~A~~fA~~Ga~Vvl~aR 40 (338) T PRK07109 5 PLGRQVVV--ITGASAGV-GRATARAFARRGAKVVLLAR 40 (338) T ss_pred CCCCCEEE--EECCCCHH-HHHHHHHHHHCCCEEEEEEC T ss_conf 06989899--94843499-99999999987998999989 No 140 >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional Probab=96.71 E-value=0.0082 Score=37.87 Aligned_cols=32 Identities=28% Similarity=0.566 Sum_probs=16.2 Q ss_pred CCCCCCEEEEE-EEC--HHHHHHHHHHHHHHHHCCCEEE Q ss_conf 98885569999-528--4789999999999998798899 Q gi|254780622|r 1 MDLSGKKIALI-MCG--SVAVYKSLDLIRRLRERGAVVI 36 (405) Q Consensus 1 m~l~~k~Illg-vtG--siaa~k~~~l~~~L~~~g~~V~ 36 (405) |+|+||++++- .+| +|- ..+++.|.+.|++|. T Consensus 2 ~~L~gK~~lVTGaag~rGIG----~aiA~~la~~Ga~Vv 36 (256) T PRK08594 2 LSLEGKTYVVMGVANKRSIA----WGIARSLHNAGAKLV 36 (256) T ss_pred CCCCCCEEEEECCCCCCHHH----HHHHHHHHHCCCEEE T ss_conf 89999889998999996399----999999998799999 No 141 >PRK08703 short chain dehydrogenase; Provisional Probab=96.70 E-value=0.0083 Score=37.84 Aligned_cols=76 Identities=28% Similarity=0.333 Sum_probs=46.8 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C---------CCCCCEEEE--EHH Q ss_conf 0179778984042010102135762157727889999999825883899841566-7---------765674675--465 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I---------ADPPNVMTI--HVE 256 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~---------~~~~~~~~i--~v~ 256 (405) .|+||.+|||+|. +-.|.++|+++.+.||+|.++.-... + ...+....+ .+. T Consensus 3 ~L~gK~~lITGas----------------~GIG~aiA~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~d~~ 66 (239) T PRK08703 3 TLSDKTILVTGAS----------------QGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLM 66 (239) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECC T ss_conf 8596989994886----------------289999999999879989999798889999999999737995499998505 Q ss_pred -----HHHHHHHHHHHCC--CCCEEEEEHHH Q ss_conf -----7789999998505--88879974044 Q gi|254780622|r 257 -----RAEDMLQEVLKAL--PVDIAVMVSAV 280 (405) Q Consensus 257 -----t~~em~~~~~~~~--~~D~~I~aAAV 280 (405) ..+++...+.+.. ..|++|.+|.. T Consensus 67 ~~~~~~~~~~~~~~~~~~~G~lD~lvnnAG~ 97 (239) T PRK08703 67 SAEEKEFEQFAATIAEATQGKLDGIVHCAGY 97 (239) T ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEECCCC T ss_conf 6307899999999999837997689966654 No 142 >PRK05875 short chain dehydrogenase; Provisional Probab=96.70 E-value=0.0083 Score=37.87 Aligned_cols=17 Identities=24% Similarity=-0.027 Sum_probs=8.3 Q ss_pred HHHHHHHHCCCCEEEEE Q ss_conf 99999982588389984 Q gi|254780622|r 223 AIAKSLAYFGAEVILIS 239 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~ 239 (405) .+|.++..+|-.|-.|+ T Consensus 173 ~lA~Ela~~gIrVNaV~ 189 (277) T PRK05875 173 LAADELGPSWVRVNSIR 189 (277) T ss_pred HHHHHHHHCCEEEEEEE T ss_conf 99999710696999986 No 143 >PRK07479 consensus Probab=96.70 E-value=0.0084 Score=37.83 Aligned_cols=33 Identities=42% Similarity=0.550 Sum_probs=19.1 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 1797789840420101021357621577278899999998258838998 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI 238 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li 238 (405) |+||.+|||+| |+-.|.++|+.|...|++|.+. T Consensus 3 L~gK~alITGg----------------s~GIG~a~a~~la~~G~~V~i~ 35 (252) T PRK07479 3 LSGKVAIVTGA----------------GSGFGEGIAKRFAREGAKVVVA 35 (252) T ss_pred CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEE T ss_conf 79988999388----------------7689999999999879999999 No 144 >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated Probab=96.68 E-value=0.0092 Score=37.57 Aligned_cols=84 Identities=21% Similarity=0.173 Sum_probs=52.9 Q ss_pred CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CC-CCCCEEE------ Q ss_conf 3200179778984042010102135762157727889999999825883899841566------77-6567467------ Q gi|254780622|r 186 KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IA-DPPNVMT------ 252 (405) Q Consensus 186 ~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~-~~~~~~~------ 252 (405) ..-.|+||.+|||+|. +-.|.++|+.+...||+|.+..-... .. .-.+.+. T Consensus 5 ~~~~L~gKvalVTGas----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~g~~~~~~~~D 68 (255) T PRK06113 5 DNLRLDGKCAIITGAG----------------AGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68 (255) T ss_pred CCCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECC T ss_conf 8767999989995887----------------789999999999879999999698899999999999659908999836 Q ss_pred -EEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf -54657789999998505-8887997404444432 Q gi|254780622|r 253 -IHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 253 -i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) -+-.+.+.+.+.+.+.+ ..|++|..|.....+| T Consensus 69 v~~~~~~~~~v~~~~~~~G~iDilVnNAG~~~~~~ 103 (255) T PRK06113 69 ITSEQELSALADFAVSKLGKVDILVNNAGGGGPKP 103 (255) T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 89999999999999998199889998788789987 No 145 >PRK07478 short chain dehydrogenase; Provisional Probab=96.67 E-value=0.0077 Score=38.07 Aligned_cols=81 Identities=22% Similarity=0.293 Sum_probs=49.2 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C---CCCCEEEE-----E Q ss_conf 0179778984042010102135762157727889999999825883899841566-7-----7---65674675-----4 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A---DPPNVMTI-----H 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~---~~~~~~~i-----~ 254 (405) .|+||.+|||+|. +=.|.++|+.|...||+|.+..-... + + ....+..+ + T Consensus 3 ~L~gKvalVTGas----------------~GIG~aiA~~la~~Ga~Vvi~~r~~~~l~~~~~ei~~~g~~~~~~~~Dvt~ 66 (254) T PRK07478 3 LLNGKVAIITGAS----------------SGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD 66 (254) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 8899879995887----------------689999999999879999999798899999999999649908999768999 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHH-HHHH Q ss_conf 657789999998505-888799740444-4432 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVS-DWRF 285 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVS-Df~~ 285 (405) -+..+++.+++.+.+ ..|++|..|.+. ++.+ T Consensus 67 ~~~v~~~v~~~~~~~G~iDiLVNNAG~~~~~~~ 99 (254) T PRK07478 67 EAYAKALVALAVERFGGLDIAFNNAGILGEMGP 99 (254) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC T ss_conf 999999999999984999899988743689989 No 146 >PRK06128 oxidoreductase; Provisional Probab=96.67 E-value=0.0073 Score=38.22 Aligned_cols=110 Identities=22% Similarity=0.250 Sum_probs=65.2 Q ss_pred CCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---------CCCCEEE--E-- Q ss_conf 20017977898404201010213576215772788999999982588389984156677---------6567467--5-- Q gi|254780622|r 187 ELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA---------DPPNVMT--I-- 253 (405) Q Consensus 187 ~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~---------~~~~~~~--i-- 253 (405) ...|+||.+|||+| |.=.|.++|+.|.+.||+|.+.+-+.... ...+.+. + T Consensus 50 ~grL~GKvAlVTGg----------------ssGIG~AiA~~lA~eGA~Vvi~~~~~~~~~a~~~~~~i~~~G~~a~~v~~ 113 (300) T PRK06128 50 FGRLQGRKALITGA----------------DSGIGRATAIAFAREGADIVLNYLPEEEQDAAEVVQLIQAEGRKAVAVPG 113 (300) T ss_pred CCCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEC T ss_conf 88789995899173----------------66999999999998699999942995567899999999965981899974 Q ss_pred ---EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH Q ss_conf ---4657789999998505-8887997404444432222101123345577510455218068988 Q gi|254780622|r 254 ---HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI 315 (405) Q Consensus 254 ---~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~ 315 (405) .-...+++.+++.+.+ ..|++|-+|+...+..+ ..+ +.-..+...+.+.|.-.--+.+. T Consensus 114 Dvsd~~~~~~~v~~~~~~~G~iDiLVNNAG~~~~~~~-~~~--~~~e~w~~~~~vNl~g~f~~~~a 176 (300) T PRK06128 114 DLKDEAFCRQLVERAVKELGGLDILVNIAGKQTARKD-IAD--ITTEQFDATFKTNVYAMFWLCKA 176 (300) T ss_pred CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC-HHH--CCHHHHHHHHHHCCHHHHHHHHH T ss_conf 7899999999999999980999989989999778999-177--99999999986611589999999 No 147 >PRK08589 short chain dehydrogenase; Validated Probab=96.65 E-value=0.011 Score=37.17 Aligned_cols=79 Identities=19% Similarity=0.247 Sum_probs=40.2 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCCEEEE-----EH Q ss_conf 017977898404201010213576215772788999999982588389984156677--------65674675-----46 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPNVMTI-----HV 255 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~~~~i-----~v 255 (405) .|+||.+|||+|+ +=.|.++|+.|...||+|.+..-.-... ....+..+ .- T Consensus 3 rL~gKvalVTGas----------------~GIG~aiA~~la~~Ga~Vv~~d~~~~~~~~~~~i~~~g~~~~~~~~Dvsd~ 66 (272) T PRK08589 3 RLENKVAVITGAS----------------TGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDE 66 (272) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCH T ss_conf 9997989997825----------------699999999999869999998382789999999995599489999607999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHH Q ss_conf 57789999998505-88879974044444 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDW 283 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf 283 (405) ++.+++.+++.+.+ ..|++|.+|.+... T Consensus 67 ~~v~~~v~~~~~~~G~iDiLVNNAGi~~~ 95 (272) T PRK08589 67 QQVKDFASDIKEQFGHIDVLFNNAGVDNA 95 (272) T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCC T ss_conf 99999999999982998789989866788 No 148 >PRK12747 short chain dehydrogenase; Provisional Probab=96.62 E-value=0.0083 Score=37.85 Aligned_cols=79 Identities=30% Similarity=0.272 Sum_probs=42.7 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC----------CCCCE-----EEEE Q ss_conf 17977898404201010213576215772788999999982588389984156677----------65674-----6754 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA----------DPPNV-----MTIH 254 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~----------~~~~~-----~~i~ 254 (405) |+||.+|||+| |+-.|.++|+.|...||+|.+-++..... ..... ++-. T Consensus 2 L~gKvalITGa----------------s~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 65 (252) T PRK12747 2 LKGKVALVTGA----------------SRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES 65 (252) T ss_pred CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 89599999484----------------77899999999998799999965998789999999999649957998336356 Q ss_pred HHHHHHHHHHHHHCC-------CCCEEEEEHHHHHHH Q ss_conf 657789999998505-------888799740444443 Q gi|254780622|r 255 VERAEDMLQEVLKAL-------PVDIAVMVSAVSDWR 284 (405) Q Consensus 255 v~t~~em~~~~~~~~-------~~D~~I~aAAVSDf~ 284 (405) .+..+.+.+++.+.+ +.|++|.+|.+.... T Consensus 66 ~~~~~~~~~~~~~~~~~~~g~~~iDiLVnnAG~~~~~ 102 (252) T PRK12747 66 LHGVEALYSSLDNELQKRTGSTKFDILINNAGIGPGA 102 (252) T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC T ss_conf 7999999999999999842899810899899999998 No 149 >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed Probab=96.62 E-value=0.012 Score=36.89 Aligned_cols=107 Identities=23% Similarity=0.254 Sum_probs=62.3 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEE-----EHHH Q ss_conf 0179778984042010102135762157727889999999825883899841566------7765674675-----4657 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPPNVMTI-----HVER 257 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~~i-----~v~t 257 (405) +|+||.+|||+|+ +=.|.++|++|...||.|.+..-... ......+..+ +.+. T Consensus 3 ~l~gK~alITG~s----------------~GIG~aia~~~a~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 66 (245) T PRK12936 3 DLTGRKALVTGAS----------------GGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDE 66 (245) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEECCCCCHHH T ss_conf 8899989992747----------------689999999999869999998299999999999838966999913799999 Q ss_pred HHHHHHHHHHCCC-CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH Q ss_conf 7899999985058-887997404444432222101123345577510455218068988 Q gi|254780622|r 258 AEDMLQEVLKALP-VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI 315 (405) Q Consensus 258 ~~em~~~~~~~~~-~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~ 315 (405) .+.+.+++.+.+. .|++|.+|.+.-..+ . .++.-.++.+.+.+.|...--+.+. T Consensus 67 v~~~~~~~~~~~g~iDiLINnAG~~~~~~--~--~~~~~e~w~~~~~vNl~~~f~~~~~ 121 (245) T PRK12936 67 VKALGQKAEADLEGVDILVNNAGITKDGL--F--VRMSDEDWDAVLEVNLTAVFRLTRE 121 (245) T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCCCC--C--CCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 99999999997599969998998899998--1--2099999999999981999999999 No 150 >PRK08303 short chain dehydrogenase; Provisional Probab=96.60 E-value=0.0053 Score=39.09 Aligned_cols=51 Identities=22% Similarity=0.214 Sum_probs=30.0 Q ss_pred CCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE-CCC Q ss_conf 977898404201010213576215772788-----999999982588389984-156 Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS-GPV 242 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~-g~~ 242 (405) |.=|-|+++.........+.-...+..|-| ..+|.|+..+|-.|..|+ |.+ T Consensus 152 G~IVnisS~~~~~~~~~~~~~~~Y~asKaAv~~ltr~lA~Ela~~GIrVNaV~PG~i 208 (305) T PRK08303 152 GLVVEVTDGTAEYNATHYRLSVFYDLAKTAVLRLAFSLAHELAPHGATAVALTPGWL 208 (305) T ss_pred CEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCC T ss_conf 589998855552277887751989999999999999999997341919999963887 No 151 >PRK06194 hypothetical protein; Provisional Probab=96.56 E-value=0.0089 Score=37.66 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=19.5 Q ss_pred CCCCCEEEE-EEECHHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 888556999-9528478999999999999879889998 Q gi|254780622|r 2 DLSGKKIAL-IMCGSVAVYKSLDLIRRLRERGAVVIPV 38 (405) Q Consensus 2 ~l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g~~V~vv 38 (405) +|+||.+++ |-+++| ...+++.|-+.|+.|.++ T Consensus 3 ~l~gKvavITGassGI----G~a~A~~la~~Ga~Vvl~ 36 (301) T PRK06194 3 DFAGKVAVITGAASGF----GREFARIGARLGMKLVLA 36 (301) T ss_pred CCCCCEEEEECCCCHH----HHHHHHHHHHCCCEEEEE T ss_conf 9899989992737799----999999999879989999 No 152 >PRK08277 D-mannonate oxidoreductase; Provisional Probab=96.55 E-value=0.013 Score=36.62 Aligned_cols=75 Identities=33% Similarity=0.442 Sum_probs=49.3 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCC-CCCEEEE-----E Q ss_conf 0179778984042010102135762157727889999999825883899841566--------776-5674675-----4 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IAD-PPNVMTI-----H 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~~-~~~~~~i-----~ 254 (405) +|+||.+|||+| |+-.|.++|+.+...||+|.+..-... +.. ...+..+ . T Consensus 7 ~L~gKvalVTGa----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~g~~~~~~~~Dvtd 70 (278) T PRK08277 7 SLKGKVAVITGG----------------GGVLGGAMAKELARAGAKVAILDRNQEKAEAVVEEIKANGGEAIALKADVLD 70 (278) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCC T ss_conf 889998999586----------------7489999999999879989999798899999999998459909999824899 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHH Q ss_conf 657789999998505-8887997404 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSA 279 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAA 279 (405) .++.+++.+++.+.+ ..|++|.+|. T Consensus 71 ~~~v~~~~~~~~~~~G~iDiLVNnAG 96 (278) T PRK08277 71 KESLEQARQQILKDFGRCDILINGAG 96 (278) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCC T ss_conf 99999999999998499888998898 No 153 >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=96.50 E-value=0.012 Score=36.83 Aligned_cols=17 Identities=29% Similarity=0.280 Sum_probs=8.9 Q ss_pred HHHHHHHHCCCCEEEEE Q ss_conf 99999982588389984 Q gi|254780622|r 223 AIAKSLAYFGAEVILIS 239 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~ 239 (405) .+|.++..+|-.|-.|+ T Consensus 180 ~lA~ela~~gIrVN~V~ 196 (257) T PRK12748 180 SLAPVLAEKGITVNAVN 196 (257) T ss_pred HHHHHHHHHCEEEEEEE T ss_conf 99999723094999997 No 154 >PRK12938 acetyacetyl-CoA reductase; Provisional Probab=96.50 E-value=0.009 Score=37.61 Aligned_cols=158 Identities=15% Similarity=0.174 Sum_probs=83.2 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCCEEE-------EE Q ss_conf 17977898404201010213576215772788999999982588389984156677--------6567467-------54 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPNVMT-------IH 254 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~~~~-------i~ 254 (405) |++|.+|||+| |+-.|.++|+.|.+.|++|.+..++-... .-.+.+. -+ T Consensus 1 L~~KvalVTGg----------------s~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~ 64 (246) T PRK12938 1 MSQRIAYVTGG----------------MGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD 64 (246) T ss_pred CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 95098999185----------------86999999999998799899947998178999999998459978999678799 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHC--CCCCCEEEEEEC Q ss_conf 657789999998505-88879974044444322221011233455775104552180689887621--489958999811 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHH--QCRPSIVVGFAA 331 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~--k~~~~~lVGFka 331 (405) -++.+++.+.+.+.+ ..|++|..|.+....+ . .++...+....+.+.|.-.--+.+.+.++ +.....+|-+.- T Consensus 65 ~~~~~~~~~~i~~~~g~idiLVNNAG~~~~~~--~--~~~~~~~w~~~~~vNl~~~f~~~~~~~~~m~~~~~G~IVnisS 140 (246) T PRK12938 65 WDSTKAAFDKVKAEVGEIDVLVNNAGITRDVV--F--RKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISS 140 (246) T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC--H--HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE T ss_conf 99999999999997599989998988899988--0--3499999999999985639999999998610328818999833 Q ss_pred CC---C--HHHHHH----------HHHHHHCCCCEEEEECCCCCCCCCCCCCE Q ss_conf 41---2--389999----------99999749989999205776777776611 Q gi|254780622|r 332 ET---Q--CIEQNA----------REKLLNKGADFIVSNCILPDTGFVGKEWN 369 (405) Q Consensus 332 ET---~--~l~~~A----------~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n 369 (405) -. . ....++ +.--.+-+-+=|-.|.|.++ ++.++.. T Consensus 141 ~~~~~~~~~~~~Y~asKaal~~ltk~lA~Ela~~gIrVN~VaPG--~i~T~~~ 191 (246) T PRK12938 141 VNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG--YIGTDMV 191 (246) T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEC--CCCCCCH T ss_conf 66466888863779999999999999999960439899999668--7987030 No 155 >PRK07832 short chain dehydrogenase; Provisional Probab=96.50 E-value=0.012 Score=36.81 Aligned_cols=78 Identities=24% Similarity=0.346 Sum_probs=49.8 Q ss_pred CEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCC--CC-----CEEEEEHHH Q ss_conf 778984042010102135762157727889999999825883899841566--------776--56-----746754657 Q gi|254780622|r 193 KRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IAD--PP-----NVMTIHVER 257 (405) Q Consensus 193 k~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~~--~~-----~~~~i~v~t 257 (405) |++|||+| ||| .|.++|+++..+|++|.++.-... +.. .. ..++-+.+. T Consensus 1 K~alITGa---------------ssG-IG~a~A~~la~~Ga~v~l~~r~~~~l~~~~~~l~~~g~~~~~~~~~Dvsd~~~ 64 (272) T PRK07832 1 KRCFVTGA---------------ASG-IGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDA 64 (272) T ss_pred CEEEEECC---------------CHH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH T ss_conf 97999472---------------019-99999999998899899998988999999999984589714788566899999 Q ss_pred HHHHHHHHHHCC-CCCEEEEEHHHHHHHHH Q ss_conf 789999998505-88879974044444322 Q gi|254780622|r 258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRFP 286 (405) Q Consensus 258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~~ 286 (405) .+++.+.+.+.+ +.|++|.+|.++.+.+- T Consensus 65 v~~~~~~~~~~~g~iDiLiNNAGi~~~g~~ 94 (272) T PRK07832 65 VAAFAADIHAAHPSMDVVMNIAGISAWGTV 94 (272) T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCCCCC T ss_conf 999999999972998889987876888873 No 156 >PRK07775 short chain dehydrogenase; Provisional Probab=96.49 E-value=0.013 Score=36.55 Aligned_cols=21 Identities=38% Similarity=0.260 Sum_probs=10.5 Q ss_pred HHHHHHHHHHHHCCCCEEEEE Q ss_conf 788999999982588389984 Q gi|254780622|r 219 QQGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 219 k~G~~iA~~~~~~Ga~V~li~ 239 (405) =.|.++|+.+...|++|.+.. T Consensus 21 GIG~aiA~~la~~G~~V~l~~ 41 (275) T PRK07775 21 GIGAATAIELAAHGFPVALGA 41 (275) T ss_pred HHHHHHHHHHHHCCCEEEEEE T ss_conf 999999999998799899998 No 157 >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional Probab=96.45 E-value=0.024 Score=34.88 Aligned_cols=30 Identities=20% Similarity=0.224 Sum_probs=17.1 Q ss_pred CEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEEE Q ss_conf 5699-995284789999999999998798899985 Q gi|254780622|r 6 KKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPVM 39 (405) Q Consensus 6 k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~ 39 (405) |||| .|.+|=| .-.|++.|.+.|.++.++. T Consensus 2 KkILVTGg~GFI----Gs~Lv~~Ll~~~~~~v~~~ 32 (355) T PRK10217 2 RKILITGGAGFI----GSALVRYIINETSDAVVVV 32 (355) T ss_pred CEEEECCCCCHH----HHHHHHHHHHCCCCEEEEE T ss_conf 969993787579----9999999997699889998 No 158 >PRK06182 short chain dehydrogenase; Validated Probab=96.45 E-value=0.014 Score=36.40 Aligned_cols=48 Identities=23% Similarity=0.187 Sum_probs=28.9 Q ss_pred CCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE-CCC Q ss_conf 977898404201010213576215772788-----999999982588389984-156 Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS-GPV 242 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~-g~~ 242 (405) |.=|-|+|-+.+.+. -+.+-.++-|-| ..||.|+...|-.|+.|+ |++ T Consensus 126 G~IvnisS~ag~~~~---p~~~~Y~asK~av~~~t~~La~El~~~gI~V~~v~PG~v 179 (273) T PRK06182 126 GRIINITSMGGKIYT---PLGAWYHATKFALEGLSDALRLEVAPFGIDVVVIEPGGI 179 (273) T ss_pred CEEEEECCHHHCCCC---CCCCHHHHHHHHHHHHHHHHHHHHCHHCCEEEEEECCCC T ss_conf 589998684440779---997579999999999999999984403878999973898 No 159 >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=96.42 E-value=0.018 Score=35.67 Aligned_cols=83 Identities=23% Similarity=0.205 Sum_probs=43.1 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC-CCC-----------------CCCCE Q ss_conf 017977898404201010213576215772788999999982588389984156-677-----------------65674 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV-SIA-----------------DPPNV 250 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~-~~~-----------------~~~~~ 250 (405) .|+||.+|||+|... +=.|.++|+.|...||+|.+.+-.. +.. ...+. T Consensus 3 ~L~gKvalVTGas~~--------------~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 68 (257) T PRK12859 3 QLKNKVAVVTGVSRL--------------DGIGAAICKELAEAGYDIFFTYWTAYDKEMPWGVDQSEQIQLQEELLKNGV 68 (257) T ss_pred CCCCCEEEEECCCCC--------------CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC T ss_conf 889888999288999--------------862999999999879989998365201112345375799999999995498 Q ss_pred E--EE-----EHHHHHHHHHHHHHCCC-CCEEEEEHHHHHHHH Q ss_conf 6--75-----46577899999985058-887997404444432 Q gi|254780622|r 251 M--TI-----HVERAEDMLQEVLKALP-VDIAVMVSAVSDWRF 285 (405) Q Consensus 251 ~--~i-----~v~t~~em~~~~~~~~~-~D~~I~aAAVSDf~~ 285 (405) + .+ +-+..+.+.+++.+.+. .|++|.+|+.....+ T Consensus 69 ~~~~~~~Dl~~~~~~~~~i~~~~~~~g~iDilVnnAg~~~~~~ 111 (257) T PRK12859 69 KVSSMELDLTQNDAPKELINKVTEQLGYPHILINNAAYSTNND 111 (257) T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC T ss_conf 5999983589999999999999998299989998999999999 No 160 >PRK06720 hypothetical protein; Provisional Probab=96.41 E-value=0.016 Score=36.06 Aligned_cols=83 Identities=23% Similarity=0.219 Sum_probs=54.8 Q ss_pred CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCEEEE--- Q ss_conf 3200179778984042010102135762157727889999999825883899841566--------77-65674675--- Q gi|254780622|r 186 KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNVMTI--- 253 (405) Q Consensus 186 ~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~~~i--- 253 (405) .+.+|+||.++||+|+ +=.|.++|+.+.+.||+|.+..-... +. ....+..+ T Consensus 10 M~~~L~gKvalITGa~----------------~GIG~a~A~~la~~Ga~Vvi~d~~~~~~~~~~~~i~~~g~~a~~~~~D 73 (169) T PRK06720 10 MKMKLAGKVAIVTGGG----------------IGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYD 73 (169) T ss_pred CCCCCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECC T ss_conf 8686299999998975----------------489999999999869989995276365999999999749953789758 Q ss_pred --EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHH Q ss_conf --4657789999998505-888799740444443 Q gi|254780622|r 254 --HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWR 284 (405) Q Consensus 254 --~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~ 284 (405) .-+..+++.+++.+.+ +.|++|-.|.+..+. T Consensus 74 vs~~~~v~~~i~~~~~~~g~iDiLvNNAGI~~~~ 107 (169) T PRK06720 74 MEKQGDWQRVISITLNAFSRIDMLFQNAGLYKID 107 (169) T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC T ss_conf 8999999999999999759899899894217887 No 161 >PRK05855 short chain dehydrogenase; Validated Probab=96.41 E-value=0.037 Score=33.69 Aligned_cols=168 Identities=21% Similarity=0.162 Sum_probs=87.7 Q ss_pred CHHHHHHHHCCCC---CCHHHHHHHH---CCCCCEE-EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC Q ss_conf 1888988520245---5214666752---2799689-8405660000038899999998640001346521255310322 Q gi|254780622|r 91 SANFIAHVAHGMV---YDLASAILLA---KGDQPVL-IAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGY 163 (405) Q Consensus 91 TaNtiaK~A~Gia---D~llt~~~la---~~~~pi~-iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~ 163 (405) +.+..+-.++|+. .|++....-- ..+.||- |+|. ..-|-.|...+.++.--.. ...-+.. .| T Consensus 202 ~~~~~~d~~~g~~lYRAN~~~~~~~pr~r~~~vPVq~iv~~--~D~~v~p~l~~~~~~w~~~--l~rr~i~-----a~-- 270 (582) T PRK05855 202 SPTQASDGAHGVKLYRANFIRSLLAPRERYTHVPVQLIVPT--GDPYVRPALYDDLARWVPR--LWRREIK-----AG-- 270 (582) T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEC--CCCCCCHHHHCCHHHCCCC--CEEEEEC-----CC-- T ss_conf 83135677733654114576434788887788877997517--8877697774414441786--0898603-----78-- Q ss_pred CCCCCCCHHHHHHHHHHHHHCC----------------CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHH Q ss_conf 3334345589999999863101----------------320017977898404201010213576215772788999999 Q gi|254780622|r 164 GVGRMSEPCDIIRQITWLLYKS----------------KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKS 227 (405) Q Consensus 164 G~grl~e~~~I~~~~~~~~~~~----------------~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~ 227 (405) -.-=+.+|+.|...+..+.... ....++||.+|||++ ||| .|.++|.+ T Consensus 271 HW~p~s~P~~iA~~~~efv~~~~~~~~~~~~~~~~~~~~~~rFsGKvAvVTGA---------------~sG-IGrA~A~~ 334 (582) T PRK05855 271 HWLPMSHPQVLAAAVAELIDAVEGGPPPRALLRARVGRPRGRFGGKLVVVTGA---------------GSG-IGRATALA 334 (582) T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECC---------------CCH-HHHHHHHH T ss_conf 53766798999999999998635788986673354589988749958999587---------------578-99999999 Q ss_pred HHHCCCCEEEEECCCC-C-----C-CCCC--EE--EEEHHHH---HHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 9825883899841566-7-----7-6567--46--7546577---89999998505-8887997404444432 Q gi|254780622|r 228 LAYFGAEVILISGPVS-I-----A-DPPN--VM--TIHVERA---EDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 228 ~~~~Ga~V~li~g~~~-~-----~-~~~~--~~--~i~v~t~---~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) |..+||+|.+..=... + . .-.+ .. ...|... +.+.+.+.+.+ ..|++|-+|.|+-+.+ T Consensus 335 fA~~GA~Vvl~Dr~~~~l~eta~ei~~~G~~a~~~~~DVtd~~av~al~~~v~~~~G~iDILVNNAGI~~~g~ 407 (582) T PRK05855 335 FAREGAEVVASDIDEAAAERTAALIRAAGAVAHAYRVDVSDADAMEALAEWVGAEHGVPDIVVNNAGIGMAGG 407 (582) T ss_pred HHHCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC T ss_conf 9977999999607999999999999951984899975589999999999999997699999998987589978 No 162 >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional Probab=96.39 E-value=0.029 Score=34.39 Aligned_cols=32 Identities=28% Similarity=0.420 Sum_probs=18.0 Q ss_pred CCCCCCEEEE-EEE--CHHHHHHHHHHHHHHHHCCCEEE Q ss_conf 9888556999-952--84789999999999998798899 Q gi|254780622|r 1 MDLSGKKIAL-IMC--GSVAVYKSLDLIRRLRERGAVVI 36 (405) Q Consensus 1 m~l~~k~Ill-gvt--Gsiaa~k~~~l~~~L~~~g~~V~ 36 (405) |+|+||..++ |.. -||. ..+++.|.++|++|- T Consensus 4 l~L~GKvAlVTGaGgs~GIG----~aiA~~lA~~GA~Vv 38 (298) T PRK06300 4 IDLTGKVAFIAGIGDDQGYG----WGIAKMLAEAGATII 38 (298) T ss_pred CCCCCCEEEEECCCCCCHHH----HHHHHHHHHCCCEEE T ss_conf 89999979990879986299----999999998299999 No 163 >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=96.38 E-value=0.017 Score=35.89 Aligned_cols=45 Identities=20% Similarity=0.197 Sum_probs=26.8 Q ss_pred CCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE Q ss_conf 977898404201010213576215772788-----999999982588389984 Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS 239 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~ 239 (405) |+=|-|+|..... +-...++++.-|-| ..+|.++..+|-.|-.|+ T Consensus 145 G~IInisS~ag~~---g~~g~~~Y~AsKagv~~lTrslA~Ela~~gIRVNaIa 194 (303) T PRK07792 145 GRIVNTSSEAGLV---GPVGQANYGAAKAGITALTLSAARALGRYGVRANAIC 194 (303) T ss_pred EEEEEECCHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC T ss_conf 4999974476566---8998588999999999999999999855196999989 No 164 >PRK09135 pteridine reductase; Provisional Probab=96.38 E-value=0.017 Score=35.86 Aligned_cols=81 Identities=21% Similarity=0.190 Sum_probs=52.0 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----------CCCCCEEEE---- Q ss_conf 01797789840420101021357621577278899999998258838998415667-----------765674675---- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-----------ADPPNVMTI---- 253 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-----------~~~~~~~~i---- 253 (405) .+.||.+|||+|. +-.|.++|+.|...||+|.+....... ..+..+..+ T Consensus 3 ~~sgKvalVTGas----------------~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv 66 (249) T PRK09135 3 TDSSKVALITGGA----------------RRIGAAIARTLHAAGYRVAVHYHRSAAEADALAAELNRLRPGSAAALQADL 66 (249) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCC T ss_conf 8999889996887----------------589999999999879989998189879999999999850598189998169 Q ss_pred -EHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf -4657789999998505-8887997404444432 Q gi|254780622|r 254 -HVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 254 -~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) .-+..+++.+++.+.+ ..|++|.+|.+....+ T Consensus 67 ~~~~~v~~~~~~~~~~~G~iDiLVNNAg~~~~~~ 100 (249) T PRK09135 67 LDPDALEQLVAAAVAAFGRLDALVNNASSFYPTP 100 (249) T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC T ss_conf 9999999999999998399989998998899998 No 165 >PRK07985 oxidoreductase; Provisional Probab=96.37 E-value=0.017 Score=35.92 Aligned_cols=78 Identities=31% Similarity=0.333 Sum_probs=53.9 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-----------CCCCEEEE--- Q ss_conf 0017977898404201010213576215772788999999982588389984156677-----------65674675--- Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA-----------DPPNVMTI--- 253 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-----------~~~~~~~i--- 253 (405) ..|+||.+|||+| |+-.|.++|+.|...||+|.+-+-..+.. .-.....+ T Consensus 45 GrL~gKvalVTGa----------------s~GIG~aiA~~lA~~GA~Vvi~~~~~~~~~a~~~~~~~~~~g~~~~~~~~D 108 (294) T PRK07985 45 GRLKDRKALVTGG----------------DSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGD 108 (294) T ss_pred CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECC T ss_conf 7789997999172----------------669999999999987999999429966678999999999729958999767 Q ss_pred --EHHHHHHHHHHHHHCCC-CCEEEEEHHHH Q ss_conf --46577899999985058-88799740444 Q gi|254780622|r 254 --HVERAEDMLQEVLKALP-VDIAVMVSAVS 281 (405) Q Consensus 254 --~v~t~~em~~~~~~~~~-~D~~I~aAAVS 281 (405) .-+..++|.+++.+.+. .|++|..|... T Consensus 109 vs~~~~v~~lv~~~~~~fG~iDiLVnnAG~~ 139 (294) T PRK07985 109 LSDEKFARSLVHEAHKALGGLDIMALVAGKQ 139 (294) T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 8999999999999999859988899806666 No 166 >PRK08251 short chain dehydrogenase; Provisional Probab=96.34 E-value=0.017 Score=35.89 Aligned_cols=79 Identities=16% Similarity=0.267 Sum_probs=50.5 Q ss_pred CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCE--EEE--EH--- Q ss_conf 9778984042010102135762157727889999999825883899841566--------77-65674--675--46--- Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNV--MTI--HV--- 255 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~--~~i--~v--- 255 (405) .|+||||++ |+=.|.++|+++..+|++|.++.-... +. ..++. ..+ ++ T Consensus 2 ~K~vlITGA----------------ssGIG~alA~~la~~G~~v~l~~r~~~~l~~~~~el~~~~~~~~v~~~~~Dvsd~ 65 (248) T PRK08251 2 RQKILITGA----------------SSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65 (248) T ss_pred CCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCH T ss_conf 998999478----------------6399999999999879989999898889999999998737997399997867868 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHH Q ss_conf 57789999998505-88879974044444322 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFP 286 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~ 286 (405) ++.+++.+.+.+.+ ..|++|.+|.+.++.+. T Consensus 66 ~~v~~~~~~~~~~~g~iD~lvnNAGi~~~~~~ 97 (248) T PRK08251 66 DQVFEVFAEFSDELGGLDRVIVNAGIGKGARL 97 (248) T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC T ss_conf 99999999999980999899985765788665 No 167 >PRK06181 short chain dehydrogenase; Provisional Probab=96.29 E-value=0.018 Score=35.64 Aligned_cols=78 Identities=24% Similarity=0.401 Sum_probs=46.9 Q ss_pred CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCEE-----EEEHHH Q ss_conf 9778984042010102135762157727889999999825883899841566--------77-656746-----754657 Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNVM-----TIHVER 257 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~~-----~i~v~t 257 (405) ||.+|||+|. || .|.++|+.+...||+|.+..-... +. ....+. +-+-+. T Consensus 1 GKv~lITGas---------------sG-IG~a~A~~la~~Ga~vvl~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~ 64 (263) T PRK06181 1 GKVVIITGAS---------------EG-IGRALAVRLARAGARLVLAARNEERLASLAQELANYGAEALVVATDVSDAEA 64 (263) T ss_pred CCEEEEECCC---------------CH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCHHH T ss_conf 9999995810---------------19-9999999999879989999889999999999999549967999807999999 Q ss_pred HHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 789999998505-8887997404444432 Q gi|254780622|r 258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) .+++.+.+.+.+ ..|++|.+|.++.+.+ T Consensus 65 ~~~~~~~~~~~~G~iDiLVNNAGi~~~~~ 93 (263) T PRK06181 65 CERLIEAAVAHFGGIDILVNNAGMTMWSR 93 (263) T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 99999999998299648998785678887 No 168 >PRK06123 short chain dehydrogenase; Provisional Probab=96.23 E-value=0.023 Score=34.97 Aligned_cols=158 Identities=15% Similarity=0.105 Sum_probs=82.5 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--------CCCCCEEE-------EE Q ss_conf 1797789840420101021357621577278899999998258838998415667--------76567467-------54 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--------ADPPNVMT-------IH 254 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--------~~~~~~~~-------i~ 254 (405) +.+|-+|||+|. +-.|.++|+.+...|++|.+....... -...+.+. -+ T Consensus 1 m~nKvalITGas----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~ 64 (249) T PRK06123 1 MMRKVMIITGAS----------------RGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVAD 64 (249) T ss_pred CCCCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCC T ss_conf 999889996868----------------7999999999998799899980898789999999999649909999847999 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH----HHHHHHHHCC-CCCCEEEE Q ss_conf 657789999998505-88879974044444322221011233455775104552180----6898876214-89958999 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP----DILKIIGHHQ-CRPSIVVG 328 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p----dIL~~i~~~k-~~~~~lVG 328 (405) -++.+.|.+.+.+.+ ..|++|..|++.....+ . .++.-+.+.+.+.+.|.-.- -.+..+.+++ .....+|. T Consensus 65 ~~~v~~~~~~~~~~~G~iDiLVnNAG~~~~~~~-~--~~~~~~~w~~~~~vNl~~~~~~~~~~~~~m~~~~~g~~g~IIn 141 (249) T PRK06123 65 EADVLRLFEAVDRELGRLDALVNNAGILEAQMR-L--EQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVN 141 (249) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC-H--HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE T ss_conf 999999999999982998789988855789997-2--1299999999985406999999999999999970899837999 Q ss_pred EEC---CC---CHHHHHHHHH-----H-----HHCCCCEEEEECCCCCCCCCCCCC Q ss_conf 811---41---2389999999-----9-----974998999920577677777661 Q gi|254780622|r 329 FAA---ET---QCIEQNAREK-----L-----LNKGADFIVSNCILPDTGFVGKEW 368 (405) Q Consensus 329 Fka---ET---~~l~~~A~~K-----l-----~~K~~D~IVAN~i~~~~~~fgsd~ 368 (405) ..- .. .+...++-.| | .+-+-+=|-.|.|.++ ++.++. T Consensus 142 isS~~~~~~~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrvN~IaPG--~i~T~~ 195 (249) T PRK06123 142 VSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPG--VIYTEI 195 (249) T ss_pred ECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEC--CCCCCC T ss_conf 744765658983068789999999999999999986559699999867--897743 No 169 >PRK12367 short chain dehydrogenase; Provisional Probab=96.18 E-value=0.023 Score=34.95 Aligned_cols=79 Identities=24% Similarity=0.316 Sum_probs=52.8 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE-CCCC---CCCCCCEEEEEHHHHHHHHH Q ss_conf 0017977898404201010213576215772788999999982588389984-1566---77656746754657789999 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS-GPVS---IADPPNVMTIHVERAEDMLQ 263 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~-g~~~---~~~~~~~~~i~v~t~~em~~ 263 (405) ..++||+|.||+. ||-.|.||.+.++.+||+|+-++ ++.+ .......+.+.-+-.+| . T Consensus 13 ~~~kgKtIgITGA----------------sGaLG~AL~k~f~~~GakVIalTh~~~~~~~~~~~~p~~wi~W~cG~E--~ 74 (250) T PRK12367 13 SRWNGKRIGITGA----------------SGALGKALTKLFRAKGAKVIGLTHSKINNSEISDESPNEWVSWECGKE--S 74 (250) T ss_pred CCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCH--H T ss_conf 5638987999678----------------738999999999988998999836888875455678952898434998--9 Q ss_pred HHHHCC-CCCEEEEEHHHHHHH Q ss_conf 998505-888799740444443 Q gi|254780622|r 264 EVLKAL-PVDIAVMVSAVSDWR 284 (405) Q Consensus 264 ~~~~~~-~~D~~I~aAAVSDf~ 284 (405) .+.+.+ +.|++|...-+-++. T Consensus 75 ~L~~~LkkiDILILNHGIn~~~ 96 (250) T PRK12367 75 SLDKTLAKIDVLILNHGINPGG 96 (250) T ss_pred HHHHHHHHCCEEEECCCCCCCC T ss_conf 9999987588999838777455 No 170 >PRK06483 short chain dehydrogenase; Provisional Probab=96.17 E-value=0.019 Score=35.48 Aligned_cols=75 Identities=17% Similarity=0.125 Sum_probs=47.4 Q ss_pred CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--CC--CCCCEEEEE-----HHHHHHHH Q ss_conf 9778984042010102135762157727889999999825883899841566--77--656746754-----65778999 Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--IA--DPPNVMTIH-----VERAEDML 262 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--~~--~~~~~~~i~-----v~t~~em~ 262 (405) .|.||||+| |+-.|.++|+.|...|++|.+..-... .. ...+...+. -...+++. T Consensus 2 ~ktVlVTGa----------------s~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~l~~~~~~~~~~Dv~~~~~v~~~~ 65 (236) T PRK06483 2 SAPILITGA----------------GQRIGLALAKHLLAQGQPVIVSYRSHYPAIDELRQAGATCIQADFSTNAGIMAFI 65 (236) T ss_pred CCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCEEEEECCCCHHHHHHHH T ss_conf 987999789----------------9889999999999889989999598479999998569989992279999999999 Q ss_pred HHHHHCC-CCCEEEEEHHHHH Q ss_conf 9998505-8887997404444 Q gi|254780622|r 263 QEVLKAL-PVDIAVMVSAVSD 282 (405) Q Consensus 263 ~~~~~~~-~~D~~I~aAAVSD 282 (405) +.+.+.. ..|++|.+|.... T Consensus 66 ~~~~~~~g~id~lVnNAg~~~ 86 (236) T PRK06483 66 DELKQHTDGLRAIIHNASDWL 86 (236) T ss_pred HHHHHHHCCCCEEEECCCCCC T ss_conf 999998399759997774467 No 171 >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated Probab=96.11 E-value=0.026 Score=34.67 Aligned_cols=185 Identities=23% Similarity=0.302 Sum_probs=95.4 Q ss_pred HHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC-----C Q ss_conf 99999998631013200179778984042010102135762157727889999999825883899841566-77-----6 Q gi|254780622|r 173 DIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA-----D 246 (405) Q Consensus 173 ~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~-----~ 246 (405) .+++.+... ...|+||.|.||+ .||-.|.++++++.+.||+|..++...+ +. . T Consensus 166 tlvDklmGT-----alSLKGKTV~VTG----------------ASG~LG~aL~k~l~~~GAKVIalTs~~~~i~~~~~~~ 224 (410) T PRK07424 166 TLVDKLMGT-----ALSLKGKTVAVTG----------------ASGTLGQALLKELHQQGAKVIALTSNSDKIPLEINGE 224 (410) T ss_pred HHHHHHHCC-----EEECCCCEEEEEC----------------CCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC T ss_conf 025555210-----1301686799954----------------7737789999999977998999935898655344665 Q ss_pred CCCEEEEEHHHHHH-HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH----HHH--HC Q ss_conf 56746754657789-999998505888799740444443222210112334557751045521806898----876--21 Q gi|254780622|r 247 PPNVMTIHVERAED-MLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK----IIG--HH 319 (405) Q Consensus 247 ~~~~~~i~v~t~~e-m~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~----~i~--~~ 319 (405) ...++.+.-+-.+| .++..++ +.|++|...-|..+.-.. ...+.+ .+.+..-..-++++ .+. +. T Consensus 225 ~~~~~~i~W~~G~E~~L~~~L~--kiDILILNHGIN~~g~~~--~~~i~~-----S~EINalS~~rll~lF~~~~~~~~~ 295 (410) T PRK07424 225 DLPVKTIHWQVGQEAALAELLE--KVDILVINHGINVHGERT--PEAINK-----SYEVNTFSAWRLMELFLTTVKTNQD 295 (410) T ss_pred CCCCEEEEEECCCHHHHHHHHH--HCCEEEECCCCCCCCCCC--HHHHHH-----HHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 4671278643288889888886--468998848878566659--789887-----6747877799999999999604644 Q ss_pred CCCCCEEE-EEECCCC----HHHH---HHHHH---HHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHH Q ss_conf 48995899-9811412----3899---99999---997499899992057767777766118999836985972789989 Q gi|254780622|r 320 QCRPSIVV-GFAAETQ----CIEQ---NAREK---LLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKA 388 (405) Q Consensus 320 k~~~~~lV-GFkaET~----~l~~---~A~~K---l~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~ 388 (405) +.+..+-| .=-||-. -+.| ++.-. +++-...++|.-.+ -++|-|+-| .++.||-. T Consensus 296 ~~~kEIWvNTSEAEI~PA~sP~YEiSKrliGqLVSlrrl~~~~~IRKlI---LGPFkS~LN-----------PiGiMSa~ 361 (410) T PRK07424 296 KATKEVWVNTSEAEVSPAFSPLYELSKRALGDLVTLRRLDAPCVIRKLI---LGPFKSQLN-----------PYGVMSAD 361 (410) T ss_pred CCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE---CCCCCCCCC-----------CCCCCCHH T ss_conf 5774389965343205554828898999977658676337882688763---055444688-----------76202889 Q ss_pred HHHHHHHHHHHHH Q ss_conf 9999999999998 Q gi|254780622|r 389 EVADRLCHLIVEH 401 (405) Q Consensus 389 ~iA~~Il~~i~~~ 401 (405) .+|++|++..... T Consensus 362 ~VAk~I~~~ak~~ 374 (410) T PRK07424 362 WVAKQIVKLAKRD 374 (410) T ss_pred HHHHHHHHHHHCC T ss_conf 9999999998558 No 172 >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo Probab=96.09 E-value=0.032 Score=34.10 Aligned_cols=50 Identities=34% Similarity=0.337 Sum_probs=38.8 Q ss_pred HHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 9999998631013200179778984042010102135762157727889999999825883899841 Q gi|254780622|r 174 IIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 174 I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) .+..+.+.+. ....+|+|++++|++| ||-.|.+.|..+.+.|++|+|+.- T Consensus 11 ~Va~vekal~-~~g~dl~g~~~~V~G~----------------tG~vG~~~A~~lA~~Ga~v~lv~R 60 (194) T cd01078 11 AVAAAGKALE-LMGKDLKGKTAVVLGG----------------TGPVGQRAAVLLAREGARVVLVGR 60 (194) T ss_pred HHHHHHHHHH-HHCCCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEEC T ss_conf 9999999999-8299867988999858----------------857899999999983997999958 No 173 >PRK08340 glucose-1-dehydrogenase; Provisional Probab=96.09 E-value=0.029 Score=34.36 Aligned_cols=22 Identities=32% Similarity=0.413 Sum_probs=10.5 Q ss_pred CCHHHHHHHHHHHHCCCCEEEE Q ss_conf 7278899999998258838998 Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVILI 238 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~li 238 (405) |+-+|.++|+.|...||+|.+. T Consensus 9 s~GIG~aiA~~la~~Ga~V~i~ 30 (259) T PRK08340 9 SRGIGFNVARELLKKGARVVIS 30 (259) T ss_pred CCHHHHHHHHHHHHCCCEEEEE T ss_conf 7789999999999879999999 No 174 >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional Probab=96.08 E-value=0.041 Score=33.37 Aligned_cols=19 Identities=5% Similarity=0.095 Sum_probs=12.5 Q ss_pred HHHHHHHHHHCCCEEEEEE Q ss_conf 9999999998798899985 Q gi|254780622|r 21 SLDLIRRLRERGAVVIPVM 39 (405) Q Consensus 21 ~~~l~~~L~~~g~~V~vv~ 39 (405) .-.|++.|.++|.++.+.+ T Consensus 13 Gs~l~~~Ll~~~~~~v~~v 31 (352) T PRK10084 13 GSAVVRHIINNTQDSVVNV 31 (352) T ss_pred HHHHHHHHHHCCCCEEEEE T ss_conf 9999999997799889998 No 175 >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional Probab=96.04 E-value=0.029 Score=34.32 Aligned_cols=78 Identities=18% Similarity=0.121 Sum_probs=45.6 Q ss_pred CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------C--CC-CCCEEEE-----EH Q ss_conf 9778984042010102135762157727889999999825883899841566--------7--76-5674675-----46 Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------I--AD-PPNVMTI-----HV 255 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~--~~-~~~~~~i-----~v 255 (405) +|.+|||+|. +-.|.++|+.|...|++|.+..-... + .. ...+..+ .- T Consensus 2 nKvalITG~s----------------~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~ 65 (259) T PRK12384 2 NKVAVVIGGG----------------QTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSE 65 (259) T ss_pred CCEEEEECCC----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCH T ss_conf 9789994688----------------689999999999879999999798899999999998624886089998327999 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 57789999998505-8887997404444432 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) ++.+++.+++.+.+ ..|++|.+|.++...+ T Consensus 66 ~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~ 96 (259) T PRK12384 66 QSVLALSRGVDEIFGRVDLLVYSAGIAKAAK 96 (259) T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCC T ss_conf 9999999999998299719998997778899 No 176 >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Probab=96.04 E-value=0.027 Score=34.54 Aligned_cols=77 Identities=25% Similarity=0.310 Sum_probs=48.7 Q ss_pred EEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCC-EEEEEC-CCCCC---------CC--CCEEEE--EH--- Q ss_conf 78984042010102135762157727889999999825883-899841-56677---------65--674675--46--- Q gi|254780622|r 194 RALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAE-VILISG-PVSIA---------DP--PNVMTI--HV--- 255 (405) Q Consensus 194 ~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~-V~li~g-~~~~~---------~~--~~~~~i--~v--- 255 (405) .+|||+| ||-+|.++|+.+..+|+. |.++.- +.+.. .. ..+..+ .+ T Consensus 2 tvlVTGa----------------s~GIG~~~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~~~~~g~~v~~~~~Dv~~~ 65 (180) T smart00822 2 TYLITGG----------------LGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADR 65 (180) T ss_pred EEEEECC----------------CCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCH T ss_conf 9999787----------------879999999999987998899986898781889999999995699699998026886 Q ss_pred HHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHH Q ss_conf 57789999998505-88879974044444322 Q gi|254780622|r 256 ERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFP 286 (405) Q Consensus 256 ~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~ 286 (405) +..+++.+.+.+.+ +.|++|++|.+.++.+- T Consensus 66 ~~~~~~v~~~~~~~g~id~lvn~AG~~~~~~~ 97 (180) T smart00822 66 AALAAALAAIPARLGPLRGVIHAAGVLDDGLL 97 (180) T ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCH T ss_conf 77666777679973983799942466699772 No 177 >PRK06914 short chain dehydrogenase; Provisional Probab=96.03 E-value=0.032 Score=34.04 Aligned_cols=45 Identities=20% Similarity=0.209 Sum_probs=28.7 Q ss_pred CCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE Q ss_conf 977898404201010213576215772788-----999999982588389984 Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS 239 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~ 239 (405) |+=|.|+|-...- +..+.+-.++-|-+ .+|+.|+...|-.|++|. T Consensus 133 G~IvnisS~~g~~---~~p~~~~Y~aSK~Al~~~t~sL~~El~~~gI~V~~V~ 182 (280) T PRK06914 133 GKIINISSISGQV---GFPALSPYVSSKYALEGWSESLRLEVKPFGIDVALIE 182 (280) T ss_pred CEEEEECCHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE T ss_conf 5899983413326---8998737999999999999999998431093899997 No 178 >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Probab=95.98 E-value=0.053 Score=32.68 Aligned_cols=35 Identities=26% Similarity=0.271 Sum_probs=20.7 Q ss_pred CCCCEEEE-EEECHHHHHHHHHHHHHHHHCC-CEEEEEECH Q ss_conf 88556999-9528478999999999999879-889998585 Q gi|254780622|r 3 LSGKKIAL-IMCGSVAVYKSLDLIRRLRERG-AVVIPVMTK 41 (405) Q Consensus 3 l~~k~Ill-gvtGsiaa~k~~~l~~~L~~~g-~~V~vv~T~ 41 (405) |+||+||+ |-+|+|- -+|++.|.+.+ ...-++.+. T Consensus 2 ~~~K~ILVTGGaGfIG----S~lv~~Ll~~~~~~~iii~~~ 38 (324) T TIGR03589 2 FNNKSILITGGTGSFG----KAFISRLLENYNPKKIIIYSR 38 (324) T ss_pred CCCCEEEEECCCCHHH----HHHHHHHHHCCCCCEEEEECC T ss_conf 9939999907977999----999999997299828999668 No 179 >pfam00106 adh_short short chain dehydrogenase. This family contains a wide variety of dehydrogenases. Probab=95.89 E-value=0.039 Score=33.53 Aligned_cols=69 Identities=28% Similarity=0.239 Sum_probs=43.6 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCC------------CCCCEEEE--EH---HHHHHHHHHHHHCC-CCCEEEEEH Q ss_conf 72788999999982588389984156677------------65674675--46---57789999998505-888799740 Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVILISGPVSIA------------DPPNVMTI--HV---ERAEDMLQEVLKAL-PVDIAVMVS 278 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~~------------~~~~~~~i--~v---~t~~em~~~~~~~~-~~D~~I~aA 278 (405) |+-.|.++|+.+...|++|.++.+..... ....+..+ .+ +..+++.+.+.+.. +.|++|.+| T Consensus 9 s~GIG~aia~~la~~Ga~~vv~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~linnA 88 (167) T pfam00106 9 TGGLGLALARWLAAEGARHLVLVSRRGDAPGAAELVAELEALGAEVTVAACDVADRDALAALLAALPAALGPLDGVVHNA 88 (167) T ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECC T ss_conf 87899999999998799489996599676899999999995598599998469999999999999999759973999887 Q ss_pred HHHHHHH Q ss_conf 4444432 Q gi|254780622|r 279 AVSDWRF 285 (405) Q Consensus 279 AVSDf~~ 285 (405) .+.+..+ T Consensus 89 G~~~~~~ 95 (167) T pfam00106 89 GVLDDGP 95 (167) T ss_pred CCCCCCC T ss_conf 1268986 No 180 >PRK06484 short chain dehydrogenase; Validated Probab=95.88 E-value=0.056 Score=32.51 Aligned_cols=34 Identities=12% Similarity=0.208 Sum_probs=19.3 Q ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 8556999952847899999999999987988999858 Q gi|254780622|r 4 SGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT 40 (405) Q Consensus 4 ~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T 40 (405) +||.+ .|||+-.-+ -..+++.|.++|+.|.+.-. T Consensus 4 eGKva--lVTGas~GI-G~aiA~~la~~Ga~V~~~dr 37 (530) T PRK06484 4 QARVV--LVTGAAGGI-GRACCQRFARAGDRVVMADR 37 (530) T ss_pred CCCEE--EEECCCCHH-HHHHHHHHHHCCCEEEEEEC T ss_conf 99899--997836689-99999999987999999968 No 181 >PRK06947 glucose-1-dehydrogenase; Provisional Probab=95.85 E-value=0.044 Score=33.20 Aligned_cols=77 Identities=21% Similarity=0.094 Sum_probs=50.3 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC----------CCCCCEEEE--E-- Q ss_conf 01797789840420101021357621577278899999998258838998415667----------765674675--4-- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI----------ADPPNVMTI--H-- 254 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~----------~~~~~~~~i--~-- 254 (405) .+.||-+|||+| ++-+|.++|+.|...||+|.+....-.. .....+..+ . T Consensus 3 ~~~~KvalVTGa----------------~~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs 66 (252) T PRK06947 3 NSDRKVVLITGA----------------SRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 66 (252) T ss_pred CCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 999908999388----------------3589999999999879989998089878999999999964992899984799 Q ss_pred -HHHHHHHHHHHHHCC-CCCEEEEEHHHH Q ss_conf -657789999998505-888799740444 Q gi|254780622|r 255 -VERAEDMLQEVLKAL-PVDIAVMVSAVS 281 (405) Q Consensus 255 -v~t~~em~~~~~~~~-~~D~~I~aAAVS 281 (405) -+..+.+.+++.+.+ ..|++|.+|+.. T Consensus 67 ~~~~v~~~~~~~~~~~G~iD~lVnNAG~~ 95 (252) T PRK06947 67 NEADVIAMFDAVQAAFGRLDALVNNAGIV 95 (252) T ss_pred CHHHHHHHHHHHHHHHCCCCEEEECCCCC T ss_conf 99999999999999849988999876435 No 182 >PRK07024 short chain dehydrogenase; Provisional Probab=95.79 E-value=0.052 Score=32.73 Aligned_cols=74 Identities=22% Similarity=0.239 Sum_probs=42.0 Q ss_pred CEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCC-CCCEEEE--EHHHH---HH Q ss_conf 778984042010102135762157727889999999825883899841566------776-5674675--46577---89 Q gi|254780622|r 193 KRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IAD-PPNVMTI--HVERA---ED 260 (405) Q Consensus 193 k~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~-~~~~~~i--~v~t~---~e 260 (405) ++||||++ || =+|.++|+.+.++|++|.++.-..+ .+. ...+..+ .|... ++ T Consensus 3 ~~VlITGa---------------ss-GIG~a~A~~la~~G~~v~l~~R~~~~L~~~~~~~~~~~~~~~~~Dv~d~~~~~~ 66 (256) T PRK07024 3 LKVFITGA---------------SS-GIGQALAREYARQGATLGLVARRTDALQAFAARLPKARVSVYAADVRDADALAA 66 (256) T ss_pred CEEEEECC---------------CH-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH T ss_conf 98999846---------------02-999999999998899899998988999999997679976999811799999999 Q ss_pred HHHHHHHCC-CCCEEEEEHHHHH Q ss_conf 999998505-8887997404444 Q gi|254780622|r 261 MLQEVLKAL-PVDIAVMVSAVSD 282 (405) Q Consensus 261 m~~~~~~~~-~~D~~I~aAAVSD 282 (405) +.+.+.+.. ..|++|.+|.++- T Consensus 67 ~~~~~~~~~g~iDilinNAGi~~ 89 (256) T PRK07024 67 AAADFIAAHGCPDVVIANAGISV 89 (256) T ss_pred HHHHHHHHHCCCCEEEECCCCCC T ss_conf 99999998399879998885567 No 183 >PRK06179 short chain dehydrogenase; Provisional Probab=95.78 E-value=0.053 Score=32.65 Aligned_cols=45 Identities=20% Similarity=0.383 Sum_probs=28.3 Q ss_pred CCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE Q ss_conf 977898404201010213576215772788-----999999982588389984 Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS 239 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~ 239 (405) |.=|-|+|..... |..+.+-.++-|-| ..||.|+...|-.|+.|+ T Consensus 125 G~IvnisS~~g~~---~~p~~~~Y~aSK~al~~~t~sla~El~~~gIrVn~v~ 174 (270) T PRK06179 125 GRIINISSVLGFL---PAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVE 174 (270) T ss_pred CEEEEECCHHHHC---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE T ss_conf 5899986856627---7899707999999999999999998501296899998 No 184 >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional Probab=95.74 E-value=0.065 Score=32.10 Aligned_cols=31 Identities=26% Similarity=0.237 Sum_probs=17.6 Q ss_pred CEEE-EEEECHHHHHHHHHHHHHHHH-CCCEEEEEEC Q ss_conf 5699-995284789999999999998-7988999858 Q gi|254780622|r 6 KKIA-LIMCGSVAVYKSLDLIRRLRE-RGAVVIPVMT 40 (405) Q Consensus 6 k~Il-lgvtGsiaa~k~~~l~~~L~~-~g~~V~vv~T 40 (405) |||| -|.+|=| .-.|++.|.+ .+++|.++-. T Consensus 2 KkILVTGgaGFI----Gs~Lv~~Ll~~~~~~V~~~d~ 34 (347) T PRK11908 2 KKVLILGVNGFI----GHHLTKRILETTDWEVYGMDM 34 (347) T ss_pred CEEEEECCCCHH----HHHHHHHHHHHCCCEEEEEEC T ss_conf 889997574389----999999999828978999979 No 185 >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] Probab=95.63 E-value=0.069 Score=31.92 Aligned_cols=31 Identities=23% Similarity=0.289 Sum_probs=20.4 Q ss_pred EEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 99528478999999999999879889998585 Q gi|254780622|r 10 LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) +-|||+ +=+-.-.|++.|...|++|+.+-.. T Consensus 3 iLVtG~-tGfiG~~l~~~L~~~g~~V~~~~r~ 33 (314) T COG0451 3 ILVTGG-AGFIGSHLVERLLAAGHDVRGLDRL 33 (314) T ss_pred EEEECC-CCHHHHHHHHHHHHCCCEEEEEECC T ss_conf 999928-8777999999998589979999178 No 186 >pfam01370 Epimerase NAD dependent epimerase/dehydratase family. This family of proteins utilize NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Probab=95.59 E-value=0.032 Score=34.09 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=54.3 Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCC-C---CCCCCEEEEE--HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH Q ss_conf 7727889999999825883899841566-7---7656746754--65778999999850588879974044444322221 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFGAEVILISGPVS-I---ADPPNVMTIH--VERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIA 289 (405) Q Consensus 216 SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~---~~~~~~~~i~--v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~ 289 (405) +||-.|..|++++..+|++|+.+.-... . ......+.+. +...++ .+++.+..+.|++||.||.+........ T Consensus 6 asGfiG~~l~~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~dl~~~~~-~~~~~~~~~~D~VihlAa~~~~~~~~~~ 84 (235) T pfam01370 6 GTGFIGSALVRRLLQEGYEVIVLGRRRRSESLNTGRIRFRFHEGDLTDPDA-LERLLAEVQPDAVIHLAAQSGVGASFED 84 (235) T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCHHH-HHHHHHHCCCCEEEECCCCCCCHHHHCC T ss_conf 897999999999997879899998997301222114676599965889999-9999853899899989774783265519 Q ss_pred HCCCCCCCCCCCCEEEEEECHHHHHHHHHCCC Q ss_conf 01123345577510455218068988762148 Q gi|254780622|r 290 GTKIKRKDIGDTMRIDLMENPDILKIIGHHQC 321 (405) Q Consensus 290 ~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~ 321 (405) ..+ .......-+..++....+.+. T Consensus 85 ~~~--------~~~~N~~~t~~ll~~~~~~~~ 108 (235) T pfam01370 85 PAE--------FIRANVLGTLNLLEAARRAGV 108 (235) T ss_pred HHH--------HHHHHHHHHHHHHHHHHHCCC T ss_conf 999--------999999999999999998399 No 187 >pfam04321 RmlD_sub_bind RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Probab=95.53 E-value=0.052 Score=32.70 Aligned_cols=33 Identities=30% Similarity=0.462 Sum_probs=21.5 Q ss_pred HHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHH Q ss_conf 9999999998798899985856863069899999 Q gi|254780622|r 21 SLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGA 54 (405) Q Consensus 21 ~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~ 54 (405) .-.|++.|.+.|++|.++ +..-..+..+..++. T Consensus 11 Gs~l~~~L~~~g~~v~~~-~r~~~D~~d~~~l~~ 43 (284) T pfam04321 11 GRELTRLLAERGVEVVAL-DRPELDLTDPEAVAA 43 (284) T ss_pred HHHHHHHHHHCCCEEEEE-CCCCCCCCCHHHHHH T ss_conf 999999998689989995-486257889999999 No 188 >PRK07102 short chain dehydrogenase; Provisional Probab=95.52 E-value=0.079 Score=31.55 Aligned_cols=23 Identities=30% Similarity=0.319 Sum_probs=12.9 Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 772788999999982588389984 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 216 SSGk~G~~iA~~~~~~Ga~V~li~ 239 (405) ||| .|.++|+.+..+|++|.++. T Consensus 10 ssG-IG~a~A~~la~~G~~v~l~~ 32 (243) T PRK07102 10 TSD-IARACARRYAAAGARLYLAA 32 (243) T ss_pred CHH-HHHHHHHHHHHCCCEEEEEE T ss_conf 459-99999999998799899998 No 189 >PRK08643 acetoin reductase; Validated Probab=95.46 E-value=0.063 Score=32.17 Aligned_cols=98 Identities=20% Similarity=0.207 Sum_probs=54.9 Q ss_pred CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CC-CCCCE-----EEEEHHH Q ss_conf 9778984042010102135762157727889999999825883899841566--------77-65674-----6754657 Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IA-DPPNV-----MTIHVER 257 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~-~~~~~-----~~i~v~t 257 (405) +|-+|||+| ++-+|.++|+.|.+.||+|.+..-... +. ..... .+-+-++ T Consensus 2 nKvalVTGg----------------~~GIG~aia~~la~~Ga~V~i~d~~~~~~~~~~~~~~~~~~~~~~~~~Dvt~~~~ 65 (256) T PRK08643 2 SKVALVTGA----------------GQGIGFAIAKRLVEDGFKVAIVDYNEETAKAAADKLSSDGGKAIAVKADVSNRDQ 65 (256) T ss_pred CCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCHHH T ss_conf 849999575----------------7889999999999879999999698899999999998539909999805899999 Q ss_pred HHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC Q ss_conf 789999998505-8887997404444432222101123345577510455218 Q gi|254780622|r 258 AEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMEN 309 (405) Q Consensus 258 ~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~ 309 (405) .+.+.+++.+.+ +.|++|-+|++....+-.- +.-.+....+.+.|.-. T Consensus 66 v~~~~~~~~~~~G~iDiLVNnAG~~~~~~~~~----~~~~~w~~~~~vNl~g~ 114 (256) T PRK08643 66 VFDAVQQVVDTFGDLNVVVNNAGLAPTTPIDT----ITEEQFKKVYGINVGGV 114 (256) T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH----CCHHHHHHHHHHHCHHH T ss_conf 99999999998299879998998899988255----99999999999976368 No 190 >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional Probab=95.46 E-value=0.066 Score=32.04 Aligned_cols=79 Identities=24% Similarity=0.180 Sum_probs=50.1 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC----------CCCCEEEE-----E Q ss_conf 17977898404201010213576215772788999999982588389984156677----------65674675-----4 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA----------DPPNVMTI-----H 254 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~----------~~~~~~~i-----~ 254 (405) +.+|-+|||+| |+-+|.++|+.|.+.||+|.+....-... ....+..+ + T Consensus 3 ~~~KValVTGg----------------s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~ 66 (259) T PRK12745 3 STRPVALVTGG----------------RRGIGLGIALALAAGGFDLAINDRPDAEKLAATQQELRALGVEVIFFPADVAD 66 (259) T ss_pred CCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCC T ss_conf 99999999686----------------78999999999998799899997986678999999998449948999846899 Q ss_pred HHHHHHHHHHHHHCC-CCCEEEEEHHHHHHH Q ss_conf 657789999998505-888799740444443 Q gi|254780622|r 255 VERAEDMLQEVLKAL-PVDIAVMVSAVSDWR 284 (405) Q Consensus 255 v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~ 284 (405) .++.+.+.+++.+.+ +.|++|.+|.++.+. T Consensus 67 ~~~~~~~~~~~~~~fg~iDiLVNNAG~~~~~ 97 (259) T PRK12745 67 LSAHEATLDAAQDAWGRIDCLVNNAGVGVKK 97 (259) T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCCC T ss_conf 9999999999999829988999847536688 No 191 >PRK07707 consensus Probab=95.36 E-value=0.073 Score=31.77 Aligned_cols=21 Identities=48% Similarity=0.499 Sum_probs=12.4 Q ss_pred CHHHHHHHHHHHHCCCCEEEE Q ss_conf 278899999998258838998 Q gi|254780622|r 218 GQQGHAIAKSLAYFGAEVILI 238 (405) Q Consensus 218 Gk~G~~iA~~~~~~Ga~V~li 238 (405) +-.|.++|+.|...|++|.+. T Consensus 12 ~GIG~aia~~la~~Ga~V~i~ 32 (239) T PRK07707 12 GGIGQAISKQLAQDGYTVYLH 32 (239) T ss_pred CHHHHHHHHHHHHCCCEEEEE T ss_conf 789999999999879989998 No 192 >PRK09291 short chain dehydrogenase; Provisional Probab=95.34 E-value=0.075 Score=31.69 Aligned_cols=49 Identities=27% Similarity=0.380 Sum_probs=31.4 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHH-----HHHHHHHHHHCCCCEEEEE-CCC Q ss_conf 797789840420101021357621577278-----8999999982588389984-156 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQ-----GHAIAKSLAYFGAEVILIS-GPV 242 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~-----G~~iA~~~~~~Ga~V~li~-g~~ 242 (405) .|+=|.|+|.+-.-+ .-+.+..|+-|- ..+||.|+..+|-.|..|+ |++ T Consensus 124 ~G~IV~isS~ag~~~---~p~~~~Y~aSK~Al~~~t~sLa~El~~~GIrVn~I~PG~v 178 (257) T PRK09291 124 KGKIVFVSSIAGLIT---GPFTGAYCASKHALEAIAEAMHAELAPFGIQVATVNPGPY 178 (257) T ss_pred CCEEEEECCHHHCCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC T ss_conf 968999878776689---9998419999999999999999984300958999984799 No 193 >PRK12743 acetoin dehydrogenase; Provisional Probab=95.26 E-value=0.082 Score=31.43 Aligned_cols=68 Identities=15% Similarity=0.115 Sum_probs=37.8 Q ss_pred CHHHHHHHHHHHHCCCCEEEEECCCCC-------C-CCCCEE--EE-----EHHHHHHHHHHHHHCC-CCCEEEEEHHHH Q ss_conf 278899999998258838998415667-------7-656746--75-----4657789999998505-888799740444 Q gi|254780622|r 218 GQQGHAIAKSLAYFGAEVILISGPVSI-------A-DPPNVM--TI-----HVERAEDMLQEVLKAL-PVDIAVMVSAVS 281 (405) Q Consensus 218 Gk~G~~iA~~~~~~Ga~V~li~g~~~~-------~-~~~~~~--~i-----~v~t~~em~~~~~~~~-~~D~~I~aAAVS 281 (405) +-+|.++|+.|...||+|.+....... . ...+.+ .+ .-+..+.+.+++.+.+ ..|++|.+|.+. T Consensus 12 ~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~~~G~iDilVNnAG~~ 91 (253) T PRK12743 12 SGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVVSHGVRAEIVHLDLSNLPEGAQAIEKLIQRLGRLDVLVNNAGAM 91 (253) T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC T ss_conf 89999999999987998999748997999999999994599189999048999999999999999819998999899899 Q ss_pred HHHH Q ss_conf 4432 Q gi|254780622|r 282 DWRF 285 (405) Q Consensus 282 Df~~ 285 (405) .+.+ T Consensus 92 ~~~~ 95 (253) T PRK12743 92 TKAP 95 (253) T ss_pred CCCC T ss_conf 9998 No 194 >PRK08177 short chain dehydrogenase; Provisional Probab=95.24 E-value=0.11 Score=30.67 Aligned_cols=20 Identities=20% Similarity=0.142 Sum_probs=10.6 Q ss_pred HHHHHHHHHHHCCCCEEEEE Q ss_conf 88999999982588389984 Q gi|254780622|r 220 QGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 220 ~G~~iA~~~~~~Ga~V~li~ 239 (405) .|.++|+.+..+|++|.+.. T Consensus 13 IG~aia~~l~~~G~~V~~~~ 32 (225) T PRK08177 13 LGLGLVDRLLERGWQVTATV 32 (225) T ss_pred HHHHHHHHHHHCCCEEEEEE T ss_conf 99999999998869999997 No 195 >PRK08017 short chain dehydrogenase; Provisional Probab=95.23 E-value=0.058 Score=32.42 Aligned_cols=29 Identities=21% Similarity=0.162 Sum_probs=16.0 Q ss_pred EEECCCCCHHH-----HHHHHHHHHCCCCEEEEE Q ss_conf 76215772788-----999999982588389984 Q gi|254780622|r 211 YIANRSSGQQG-----HAIAKSLAYFGAEVILIS 239 (405) Q Consensus 211 ~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~ 239 (405) ..+-.|+-|-| ..|+.|+...|-.|+.|+ T Consensus 142 ~~~~Y~asKaal~~~~~sL~~El~~~gI~V~~V~ 175 (256) T PRK08017 142 GRGAYAASKYALEAWSDALRMELRHSGIKVSLIE 175 (256) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE T ss_conf 9748999999999999999998462192899997 No 196 >PRK07074 short chain dehydrogenase; Provisional Probab=95.11 E-value=0.14 Score=30.05 Aligned_cols=77 Identities=21% Similarity=0.286 Sum_probs=36.7 Q ss_pred CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-------CCCCCCEEEE-----EHHHHH Q ss_conf 9778984042010102135762157727889999999825883899841566-------7765674675-----465778 Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-------IADPPNVMTI-----HVERAE 259 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-------~~~~~~~~~i-----~v~t~~ 259 (405) ||.+|||+| ++-.|.++|+.|...|+.|.+..-... ......+..+ .-...+ T Consensus 2 nKvalITGg----------------s~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~~~~~~~~Dv~~~~~~~ 65 (256) T PRK07074 2 SRTALVTGA----------------AGGIGQALARRFLAAGDRVLALDIDRAALAAFVDALGDAAVAPVICDLTDAASVE 65 (256) T ss_pred CCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCHHHHH T ss_conf 988999884----------------6899999999999869999999798899999999826997799997279999999 Q ss_pred HHHHHHHHCCCCCEEEEEHHHHHHH Q ss_conf 9999998505888799740444443 Q gi|254780622|r 260 DMLQEVLKALPVDIAVMVSAVSDWR 284 (405) Q Consensus 260 em~~~~~~~~~~D~~I~aAAVSDf~ 284 (405) +|.+.+.+.-+.|++|..|++.... T Consensus 66 ~~~~~i~~~g~iDiLVNNAG~~~~~ 90 (256) T PRK07074 66 RLAAALANEGPVDVLVANAGAARAA 90 (256) T ss_pred HHHHHHHHHCCCCEEEECCCCCCCC T ss_conf 9999999859987999888778998 No 197 >pfam02719 Polysacc_synt_2 Polysaccharide biosynthesis protein. This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Probab=95.06 E-value=0.19 Score=29.13 Aligned_cols=30 Identities=13% Similarity=0.240 Sum_probs=17.1 Q ss_pred EEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 9528478999999999999879889998585 Q gi|254780622|r 11 IMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 11 gvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) .|||+---+ .-.|++.|.+.|..+-++... T Consensus 2 LVTGGaGFI-GS~Lv~~Ll~~g~~~v~v~d~ 31 (280) T pfam02719 2 LVTGGGGSI-GSELCRQILKFNPKKIILFSR 31 (280) T ss_pred EEECCCCHH-HHHHHHHHHHCCCCEEEEEEC T ss_conf 997488679-999999999689988999908 No 198 >PRK07454 short chain dehydrogenase; Provisional Probab=94.89 E-value=0.12 Score=30.48 Aligned_cols=79 Identities=18% Similarity=0.160 Sum_probs=47.6 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-C-----C-CCC--CEEEE-----EHH Q ss_conf 79778984042010102135762157727889999999825883899841566-7-----7-656--74675-----465 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-I-----A-DPP--NVMTI-----HVE 256 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~-----~-~~~--~~~~i-----~v~ 256 (405) ..|.+|||++ |+=.|.++|+.|...|++|.++.-... + + ... .+..+ +-+ T Consensus 5 ~mKvalITGa----------------s~GIG~a~A~~la~~G~~V~l~~R~~~~l~~~~~e~~~~g~~~~~~~~Dvt~~~ 68 (241) T PRK07454 5 SMPTALITGA----------------SRGIGKATALAFAKAGWDLALVARSQDALEALAEELRSTGVKVAAYSIDLSNPE 68 (241) T ss_pred CCCEEEECCC----------------CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCHH T ss_conf 9988999175----------------878999999999987998999989999999999999965992899995189999 Q ss_pred HHHHHHHHHHHCC-CCCEEEEEHHHHHHHH Q ss_conf 7789999998505-8887997404444432 Q gi|254780622|r 257 RAEDMLQEVLKAL-PVDIAVMVSAVSDWRF 285 (405) Q Consensus 257 t~~em~~~~~~~~-~~D~~I~aAAVSDf~~ 285 (405) ..+++.+.+.+.+ ..|++|.+|.+..+.+ T Consensus 69 ~v~~~~~~~~~~~G~iDiLVnNAG~~~~~~ 98 (241) T PRK07454 69 AIAPGIAELLEQFGCPSVLINNAGAAYTGP 98 (241) T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCCCCC T ss_conf 999999999997599889998898899999 No 199 >COG2910 Putative NADH-flavin reductase [General function prediction only] Probab=94.81 E-value=0.067 Score=32.00 Aligned_cols=163 Identities=16% Similarity=0.079 Sum_probs=81.9 Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCC-CCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCC Q ss_conf 772788999999982588389984156677-6567467546577899999985058887997404444432222101123 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFGAEVILISGPVSIA-DPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIK 294 (405) Q Consensus 216 SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kik 294 (405) .||+-|..|++++..||++||.|.-..+.. ..+++...+-. .-|+.........+|++|.+=-... +.+ +...+ T Consensus 8 AsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~D-ifd~~~~a~~l~g~DaVIsA~~~~~--~~~--~~~~~ 82 (211) T COG2910 8 ASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKD-IFDLTSLASDLAGHDAVISAFGAGA--SDN--DELHS 82 (211) T ss_pred CCCHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCEEECCC-CCCHHHHHHHHCCCCEEEEECCCCC--CCH--HHHHH T ss_conf 374567999999986798048998076766522353020002-2274566766358766997215788--871--57788 Q ss_pred CCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEE--CC---C--------------CHHHHHH--HHHHH-HCCCCEE Q ss_conf 345577510455218068988762148995899981--14---1--------------2389999--99999-7499899 Q gi|254780622|r 295 RKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFA--AE---T--------------QCIEQNA--REKLL-NKGADFI 352 (405) Q Consensus 295 k~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFk--aE---T--------------~~l~~~A--~~Kl~-~K~~D~I 352 (405) |. -.-++..+.....+..++||=+ +| . ......| .++|+ .+++||. T Consensus 83 k~------------~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WT 150 (211) T COG2910 83 KS------------IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWT 150 (211) T ss_pred HH------------HHHHHHHHHHCCCEEEEEECCCCCEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE T ss_conf 89------------999999986159705999847420587688455058998566779998778999998635676459 Q ss_pred EEECCCCCCCCCCCCCEEEE------EECCCCEEECCCCCHHHHHHHHHHHHHH Q ss_conf 99205776777776611899------9836985972789989999999999999 Q gi|254780622|r 353 VSNCILPDTGFVGKEWNKVS------IVFPDKIEEYPELPKAEVADRLCHLIVE 400 (405) Q Consensus 353 VAN~i~~~~~~fgsd~n~v~------li~~~~~~~~~~~sK~~iA~~Il~~i~~ 400 (405) ..-+-.. -.+ |..+++.. +.+.+|.. +.|=.+.|..++|++.+ T Consensus 151 fvSPaa~-f~P-GerTg~yrlggD~ll~n~~G~S---rIS~aDYAiA~lDe~E~ 199 (211) T COG2910 151 FVSPAAF-FEP-GERTGNYRLGGDQLLVNAKGES---RISYADYAIAVLDELEK 199 (211) T ss_pred EECCHHH-CCC-CCCCCCEEECCCEEEECCCCCE---EEEHHHHHHHHHHHHHC T ss_conf 9671784-577-6556856763635777488850---34489999999987746 No 200 >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] Probab=94.79 E-value=0.19 Score=29.06 Aligned_cols=38 Identities=32% Similarity=0.377 Sum_probs=19.6 Q ss_pred CCCCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH Q ss_conf 988855699-995284789999999999998798899985856 Q gi|254780622|r 1 MDLSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 1 m~l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~ 42 (405) |.+++|.++ .|.+++| ...+++.|.++|+.|.++.... T Consensus 1 ~~~~~k~vlITGas~Gi----G~aia~~l~~~G~~v~~~~~~~ 39 (251) T COG1028 1 MDLSGKVALVTGASSGI----GRAIARALAREGARVVVAARRS 39 (251) T ss_pred CCCCCCEEEEECCCCHH----HHHHHHHHHHCCCEEEEEECCC T ss_conf 99999889998988718----9999999998899799996797 No 201 >PRK12824 acetoacetyl-CoA reductase; Provisional Probab=94.77 E-value=0.11 Score=30.55 Aligned_cols=117 Identities=21% Similarity=0.169 Sum_probs=64.4 Q ss_pred CCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--------C--CCCCEEEEE--H---H Q ss_conf 97789840420101021357621577278899999998258838998415667--------7--656746754--6---5 Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--------A--DPPNVMTIH--V---E 256 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--------~--~~~~~~~i~--v---~ 256 (405) +|-+|||+| |+-.|.++|+.|...|++|.+..-.... . ....+..+. + + T Consensus 2 ~KvalITGa----------------s~GIG~a~a~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~ 65 (245) T PRK12824 2 KKIALVTGA----------------KRGIGSAIARELLADGYRVIATYFGNYDAAKDWFEEYGFTEDQVRLKSLDVTDTE 65 (245) T ss_pred CCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHH T ss_conf 859999478----------------8889999999999879989999588077899999987404993899991389999 Q ss_pred HHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH----HHHHCCCCCCEEEEEE Q ss_conf 7789999998505-888799740444443222210112334557751045521806898----8762148995899981 Q gi|254780622|r 257 RAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK----IIGHHQCRPSIVVGFA 330 (405) Q Consensus 257 t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~----~i~~~k~~~~~lVGFk 330 (405) ..+.+.+.+.+.+ ..|++|.+|.++...+-. + +.-.+....+.+.|.-.--+.+ .+.++ ....+|-+. T Consensus 66 ~~~~~v~~~~~~~g~iDiLVnnAG~~~~~~~~--~--~~~e~w~~~~~vNl~~~f~~~~~~~~~m~~~--~~G~IVnis 138 (245) T PRK12824 66 ECQEALARIEEEEGPVDILVNNAGITRDSGFK--R--MSHQEWNDVINTNLNSVFNVTQPLFPAMCEQ--GYGRIINIS 138 (245) T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCH--H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCEEEEEC T ss_conf 99999999999749998999898889999902--3--9999999999997341599999999999983--995599974 No 202 >PRK05650 short chain dehydrogenase; Provisional Probab=94.76 E-value=0.095 Score=31.04 Aligned_cols=20 Identities=35% Similarity=0.272 Sum_probs=9.5 Q ss_pred HHHHHHHHHHHCCCCEEEEE Q ss_conf 88999999982588389984 Q gi|254780622|r 220 QGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 220 ~G~~iA~~~~~~Ga~V~li~ 239 (405) .|.++|+++..+|++|.++. T Consensus 12 IG~alA~~la~~G~~V~l~~ 31 (270) T PRK05650 12 LGRAIALRWAREGWRLALAD 31 (270) T ss_pred HHHHHHHHHHHCCCEEEEEE T ss_conf 99999999998899899997 No 203 >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Probab=94.60 E-value=0.38 Score=27.16 Aligned_cols=73 Identities=22% Similarity=0.249 Sum_probs=39.1 Q ss_pred CCCCCEEEEEEEC-HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHH--CCCCCCCCCCCCCCCCCCCCCC Q ss_conf 8885569999528-478999999999999879889998585686306989999974--7975820767887787743001 Q gi|254780622|r 2 DLSGKKIALIMCG-SVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAIS--NRRVYTHLLSYKEGYESNHIQL 78 (405) Q Consensus 2 ~l~~k~IllgvtG-siaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt--~~~v~~~~~~~~~~~~~~Hi~l 78 (405) +|+||||+|.=-| |- .-++|.|.+.|++|.++-...... .+...+.+- |-++... .. +-.+ T Consensus 11 ~~~gk~v~V~GlG~sG-----~s~a~~L~~~G~~v~~~D~~~~~~--~~~~~~~l~~~g~~~~~g---~~------~~~~ 74 (481) T PRK01438 11 DWSGLRVVVAGLGVSG-----FPAADALHELGASVTVVADGDDDR--SRERAALLEVLGATVRLG---DG------ETTL 74 (481) T ss_pred HCCCCEEEEEEECHHH-----HHHHHHHHHCCCEEEEEECCCCCC--CHHHHHHHHHCCCEEEEC---CC------HHHH T ss_conf 7189989999575889-----999999996799899997998744--868999888549889968---87------5666 Q ss_pred CCCCCEEEEEEC Q ss_conf 144655788411 Q gi|254780622|r 79 ANECDLLVVAPA 90 (405) Q Consensus 79 ~~~aD~~iVaPa 90 (405) -..+|++|+.|. T Consensus 75 ~~~~d~vV~SPG 86 (481) T PRK01438 75 PEGTELVVTSPG 86 (481) T ss_pred HCCCCEEEECCC T ss_conf 248999998997 No 204 >PRK06180 short chain dehydrogenase; Provisional Probab=94.59 E-value=0.15 Score=29.73 Aligned_cols=49 Identities=29% Similarity=0.302 Sum_probs=30.9 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE-CCC Q ss_conf 7977898404201010213576215772788-----999999982588389984-156 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS-GPV 242 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~-g~~ 242 (405) .|.=|.|+|...+-+ ....+-.++-|-+ ..||.|+...|-.|+.|+ |++ T Consensus 129 ~G~IvnisS~ag~~~---~p~~~~Y~aSK~Al~~lt~sLa~El~~~gIrVn~V~PG~v 183 (277) T PRK06180 129 RGHIVNITSMGGLIT---MPGIAYYCGSKFALEGISEALAKEVAPFGIHVTAVEPGSF 183 (277) T ss_pred CCEEEEECCHHHCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC T ss_conf 965775354665257---9998279999999999999999984323868999970787 No 205 >PRK06101 short chain dehydrogenase; Provisional Probab=94.57 E-value=0.23 Score=28.61 Aligned_cols=18 Identities=22% Similarity=0.289 Sum_probs=12.0 Q ss_pred HHHHHHHHHCCCCEEEEE Q ss_conf 999999982588389984 Q gi|254780622|r 222 HAIAKSLAYFGAEVILIS 239 (405) Q Consensus 222 ~~iA~~~~~~Ga~V~li~ 239 (405) ..|+.++..+|-.|+.|+ T Consensus 153 ~sLa~el~~~gI~V~~V~ 170 (241) T PRK06101 153 RTLALDLKKKGIKVVTVF 170 (241) T ss_pred HHHHHHHCCCCCEEEEEE T ss_conf 999998525495899997 No 206 >pfam00208 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Probab=94.55 E-value=0.39 Score=27.08 Aligned_cols=46 Identities=33% Similarity=0.417 Sum_probs=30.5 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCEE Q ss_conf 01797789840420101021357621577278899999998258838998415-6677656746 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP-VSIADPPNVM 251 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~-~~~~~~~~~~ 251 (405) .|+|++|.|.+ .|..|...|+.+..+|++|.-++.. ..+-.|.+++ T Consensus 29 ~l~g~~v~IqG-----------------fGnVG~~~a~~l~~~GakvvavsD~~G~i~~~~Gld 75 (237) T pfam00208 29 SLEGKTVAVQG-----------------FGNVGSYAAEKLLELGAKVVAVSDSSGYIYDPNGID 75 (237) T ss_pred CCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCC T ss_conf 87899999989-----------------889999999999987996999982876799999999 No 207 >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids Probab=94.47 E-value=0.41 Score=26.97 Aligned_cols=47 Identities=28% Similarity=0.379 Sum_probs=31.8 Q ss_pred CCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCEE Q ss_conf 001797789840420101021357621577278899999998258838998415-6677656746 Q gi|254780622|r 188 LLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP-VSIADPPNVM 251 (405) Q Consensus 188 ~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~-~~~~~~~~~~ 251 (405) ..|+|++|.|.+ .|..|...|+.+...||.|.-|+.. ..+..|.+++ T Consensus 27 ~~l~g~~v~IqG-----------------~GnVG~~~a~~L~~~Gakvv~vsD~~G~i~~~~Gld 74 (227) T cd01076 27 IGLAGARVAIQG-----------------FGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLD 74 (227) T ss_pred CCCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCC T ss_conf 897899999989-----------------889999999999987995999984787388888899 No 208 >PRK06482 short chain dehydrogenase; Provisional Probab=94.47 E-value=0.18 Score=29.28 Aligned_cols=46 Identities=15% Similarity=0.198 Sum_probs=31.5 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE Q ss_conf 7977898404201010213576215772788-----999999982588389984 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS 239 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~ 239 (405) .|.=|.|+|.+.+- +....+-.++-|-+ ..||.|+...|-.|++|. T Consensus 127 ~G~IinisS~~g~~---~~p~~~~Y~AsK~Al~g~tesLa~El~~~gI~V~~V~ 177 (276) T PRK06482 127 GGRIVQVSSEGGQI---AYPGFSLYHASKWGIEGFVESVRQEVAPFGIGFTIVE 177 (276) T ss_pred CCEEEEECCHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE T ss_conf 97799954524346---8999768999999999999999998443193899997 No 209 >PRK07904 short chain dehydrogenase; Provisional Probab=94.46 E-value=0.21 Score=28.77 Aligned_cols=14 Identities=21% Similarity=0.131 Sum_probs=6.6 Q ss_pred HHHHHHHHHHHCCC Q ss_conf 88999999982588 Q gi|254780622|r 220 QGHAIAKSLAYFGA 233 (405) Q Consensus 220 ~G~~iA~~~~~~Ga 233 (405) .|.++|+.+..+|+ T Consensus 20 IG~a~a~~~~~~g~ 33 (253) T PRK07904 20 IGLAICERYLRNAP 33 (253) T ss_pred HHHHHHHHHHHCCC T ss_conf 99999999997498 No 210 >PRK09730 hypothetical protein; Provisional Probab=94.45 E-value=0.17 Score=29.38 Aligned_cols=65 Identities=18% Similarity=0.103 Sum_probs=41.7 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCC--EEEE-----EHHHHHHHHHHHHHCC-CCCEEEEEHHH Q ss_conf 72788999999982588389984156677--------6567--4675-----4657789999998505-88879974044 Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPN--VMTI-----HVERAEDMLQEVLKAL-PVDIAVMVSAV 280 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~--~~~i-----~v~t~~em~~~~~~~~-~~D~~I~aAAV 280 (405) |+-.|.++|+.|...|++|.+........ ...+ +..+ +-+..+++.+++.+.+ ..|++|.+|++ T Consensus 10 s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~i~~~~g~id~LVNNAG~ 89 (247) T PRK09730 10 SRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGI 89 (247) T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC T ss_conf 26999999999998799999966998789999999999749928999825899999999999999975995599989863 Q ss_pred H Q ss_conf 4 Q gi|254780622|r 281 S 281 (405) Q Consensus 281 S 281 (405) . T Consensus 90 ~ 90 (247) T PRK09730 90 L 90 (247) T ss_pred C T ss_conf 5 No 211 >TIGR01283 nifE nitrogenase MoFe cofactor biosynthesis protein NifE; InterPro: IPR005973 The enzyme responsible for nitrogen fixation, the nitrogenase, shows a high degree of conservation of structure, function, and amino acid sequence across wide phylogenetic ranges. All known Mo-nitrogenases consist of two components, component I (also called dinitrogenase, or Fe-Mo protein), an alpha2beta2 tetramer encoded by the nifD and nifK genes, and component II (dinitrogenase reductase, or Fe protein) a homodimer encoded by the nifH gene. Two operons, nifDK and nifEN, encode a tetrameric (alpha2beta2 and N2E2) enzymatic complex. Nitrogenase contains two unusual rare metal clusters; one of them is the iron molybdenum cofactor (FeMo-co), which is considered to be the site of dinitrogen reduction and whose biosynthesis requires the products of nifNE and of some other nif genes. It has been proposed that NifNE might serve as a scaffold upon which FeMo-co is built and then inserted into component I. ; GO: 0005515 protein binding, 0006461 protein complex assembly, 0009399 nitrogen fixation. Probab=94.42 E-value=0.071 Score=31.85 Aligned_cols=73 Identities=19% Similarity=0.300 Sum_probs=48.8 Q ss_pred CCCCCCCCEEEEEECC-CHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-C--------CCCEEEEEH Q ss_conf 3200179778984042-01010213576215772788999999982588389984156677-6--------567467546 Q gi|254780622|r 186 KELLLKGKRALVTSGP-TYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA-D--------PPNVMTIHV 255 (405) Q Consensus 186 ~~~~l~gk~vlITaG~-T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-~--------~~~~~~i~v 255 (405) .+..|+||||+|=.|| -.. +.+-.+|...|-+|...-...+.+ + -++...+.= T Consensus 331 yR~~L~GKkaaiY~GGa~Ks-----------------wSlv~Al~dLGMeVV~~GTqkg~~EDy~~I~e~~~~~~~m~Dd 393 (470) T TIGR01283 331 YRERLKGKKAAIYTGGAVKS-----------------WSLVSALQDLGMEVVATGTQKGTEEDYERIRELMGEGTVMLDD 393 (470) T ss_pred HHHHHCCCEEEEECCCHHHH-----------------HHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEC T ss_conf 89973498899865864789-----------------9999888457917999830079888999999970799678625 Q ss_pred HHHHHHHHHHHHCCCCCEEEE Q ss_conf 577899999985058887997 Q gi|254780622|r 256 ERAEDMLQEVLKALPVDIAVM 276 (405) Q Consensus 256 ~t~~em~~~~~~~~~~D~~I~ 276 (405) .++.|+.+-+.+. ++|++|. T Consensus 394 ~~p~~L~~~~~~~-~ADllia 413 (470) T TIGR01283 394 ANPRELLKLLLEY-KADLLIA 413 (470) T ss_pred CCHHHHHHHHHHH-CCCEEEE T ss_conf 8878999999872-8988985 No 212 >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids Probab=94.39 E-value=0.15 Score=29.80 Aligned_cols=134 Identities=22% Similarity=0.297 Sum_probs=71.1 Q ss_pred CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH----CCHHHH-HHHHCCCCCCCCCCCCCCCCCCC Q ss_conf 9888556999952847899999999999987988999858568630----698999-99747975820767887787743 Q gi|254780622|r 1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKF----ITPLIV-GAISNRRVYTHLLSYKEGYESNH 75 (405) Q Consensus 1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~f----i~~~~l-~~lt~~~v~~~~~~~~~~~~~~H 75 (405) .+|+|||+++-=.|.++-+ +++.|.+.|+.|..|--.+..-+ +....+ +....+.-+....+...- +.. T Consensus 27 ~~l~g~~v~IqG~GnVG~~----~a~~L~~~Gakvv~vsD~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~-~~~- 100 (227) T cd01076 27 IGLAGARVAIQGFGNVGSH----AARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERI-TNE- 100 (227) T ss_pred CCCCCCEEEEECCCHHHHH----HHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCC-CCC- T ss_conf 8978999999898899999----9999998799599998478738888889999999999965980267887538-962- Q ss_pred CCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH Q ss_conf 00114465578841118889885202455214666752279968984056600000388999999986400013465212 Q gi|254780622|r 76 IQLANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESG 155 (405) Q Consensus 76 i~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g 155 (405) --+...+|+++-| |+-|.|.. -....-++++++=-| ++|.+.+.-+.|++.|+.+++ .. T Consensus 101 ~~~~~~~DI~iP~-A~~~~I~~------------~~a~~l~ak~I~EgA------N~p~t~~A~~~L~~rgI~viP-D~- 159 (227) T cd01076 101 ELLELDCDILIPA-ALENQITA------------DNADRIKAKIIVEAA------NGPTTPEADEILHERGVLVVP-DI- 159 (227) T ss_pred CHHCCCCCEEEEC-CCCCCCCH------------HHHHHCCCEEEEECC------CCCCCHHHHHHHHHCCCEEEC-CH- T ss_conf 3104788789877-76697799------------998544761998457------899898899999988698968-07- Q ss_pred HHHHCCC Q ss_conf 5531032 Q gi|254780622|r 156 AMAESNG 162 (405) Q Consensus 156 ~la~c~~ 162 (405) ++++|. T Consensus 160 -laNaGG 165 (227) T cd01076 160 -LANAGG 165 (227) T ss_pred -HHCCCC T ss_conf -744877 No 213 >PRK06940 short chain dehydrogenase; Provisional Probab=94.34 E-value=0.17 Score=29.41 Aligned_cols=37 Identities=19% Similarity=0.368 Sum_probs=19.1 Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHH Q ss_conf 8885569999528478999999999999879889998585686 Q gi|254780622|r 2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQ 44 (405) Q Consensus 2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~ 44 (405) +|++|-++++=+|+|- ..+++.|. .|+.|.+ ...+.+ T Consensus 2 rL~~kV~v~tGa~GIG----~aiA~~la-~Ga~vvi-~~~~~~ 38 (277) T PRK06940 2 NMSKEVVVVIGAGGMG----QAIARRVG-SGKTVLL-ADYNEE 38 (277) T ss_pred CCCCCEEEECCCCHHH----HHHHHHHH-HCCEEEE-EECCHH T ss_conf 9899299997816999----99999998-1998999-989889 No 214 >cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t Probab=94.28 E-value=0.26 Score=28.18 Aligned_cols=66 Identities=24% Similarity=0.344 Sum_probs=44.9 Q ss_pred HHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCEEEEEHH Q ss_conf 9986310132001797789840420101021357621577278899999998258838998415-667765674675465 Q gi|254780622|r 178 ITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP-VSIADPPNVMTIHVE 256 (405) Q Consensus 178 ~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~-~~~~~~~~~~~i~v~ 256 (405) +.+...+....+|+|++|.|-+ .|..|...|+.+...|++|.-|+.. ..+-.|.|+....+. T Consensus 24 ~~~~~~~~~~~~l~g~~vaIQG-----------------fGnVG~~aA~~l~e~GakvVaVsD~~G~i~~~~Gld~~~l~ 86 (254) T cd05313 24 FVEEMLKDRNETLKGKRVAISG-----------------SGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLA 86 (254) T ss_pred HHHHHHHHCCCCCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHH T ss_conf 9999999679695899999989-----------------77999999999997799799998578508879999889999 Q ss_pred HHHH Q ss_conf 7789 Q gi|254780622|r 257 RAED 260 (405) Q Consensus 257 t~~e 260 (405) ...+ T Consensus 87 ~l~~ 90 (254) T cd05313 87 ELKE 90 (254) T ss_pred HHHH T ss_conf 9999 No 215 >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional Probab=94.26 E-value=0.28 Score=28.05 Aligned_cols=29 Identities=17% Similarity=0.500 Sum_probs=18.5 Q ss_pred EEEECHHHHHHHHHHHHHHHHCCCE-EEEEE Q ss_conf 9952847899999999999987988-99985 Q gi|254780622|r 10 LIMCGSVAVYKSLDLIRRLRERGAV-VIPVM 39 (405) Q Consensus 10 lgvtGsiaa~k~~~l~~~L~~~g~~-V~vv~ 39 (405) +-|||+---+ .-.|++.|.+.|++ |.++= T Consensus 2 ILVTGgaGFI-GS~l~~~L~~~G~~~V~~~D 31 (308) T PRK11150 2 IIVTGGAGFI-GSNIVKALNDKGITDILVVD 31 (308) T ss_pred EEEEECCCHH-HHHHHHHHHHCCCCCEEEEE T ss_conf 9994059799-99999999977998099997 No 216 >KOG1205 consensus Probab=94.19 E-value=0.29 Score=27.96 Aligned_cols=28 Identities=14% Similarity=0.216 Sum_probs=15.4 Q ss_pred ECCCCCHHHHHH-HHHHHHHHHHHH--CCCC Q ss_conf 405660000038-899999998640--0013 Q gi|254780622|r 122 APAMNFMMWAKP-ATQRNVEILQKD--GCYF 149 (405) Q Consensus 122 aPaMn~~M~~~p-~~~~nl~~L~~~--g~~v 149 (405) -+.|++|-|-.- .|+.-+..+++. |++| T Consensus 116 ~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIV 146 (282) T KOG1205 116 RNVMDTNVFGTVYLTKAALPSMKKRNDGHIV 146 (282) T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHCCCCEEE T ss_conf 8771000402489999998876632897499 No 217 >PRK05993 short chain dehydrogenase; Provisional Probab=94.16 E-value=0.27 Score=28.07 Aligned_cols=49 Identities=24% Similarity=0.358 Sum_probs=32.2 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHHH-----HHHHHHHHHCCCCEEEEE-CCC Q ss_conf 7977898404201010213576215772788-----999999982588389984-156 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQG-----HAIAKSLAYFGAEVILIS-GPV 242 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G-----~~iA~~~~~~Ga~V~li~-g~~ 242 (405) .|.=|.|+|....-+ ..+.+-.++-|-+ .+|+.|+...|-+|++|. |++ T Consensus 127 ~G~IVnisSi~g~~~---~p~~~~Y~aSK~Av~~~~~sLr~El~~~gI~V~~i~PG~v 181 (277) T PRK05993 127 HGRIVQCSSILGLVP---MKYRGAYNASKFAIEGLSDTLRMELQGSGIHVSLIEPGPI 181 (277) T ss_pred CCEEEEECCHHHCCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC T ss_conf 838999888444888---9998389999999999999999985632868999964888 No 218 >KOG1210 consensus Probab=94.15 E-value=0.16 Score=29.53 Aligned_cols=20 Identities=25% Similarity=0.386 Sum_probs=11.3 Q ss_pred HHHHHHHHHHHCCCCEEEEE Q ss_conf 88999999982588389984 Q gi|254780622|r 220 QGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 220 ~G~~iA~~~~~~Ga~V~li~ 239 (405) ++.+|.+|+..+|..|++.. T Consensus 195 La~~l~qE~i~~~v~Vt~~~ 214 (331) T KOG1210 195 LAEALRQELIKYGVHVTLYY 214 (331) T ss_pred HHHHHHHHHHHCCEEEEEEC T ss_conf 99999998765266999972 No 219 >KOG1502 consensus Probab=94.14 E-value=0.078 Score=31.60 Aligned_cols=34 Identities=15% Similarity=0.236 Sum_probs=22.5 Q ss_pred EEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHH Q ss_conf 99952847899999999999987988999858568 Q gi|254780622|r 9 ALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSA 43 (405) Q Consensus 9 llgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A 43 (405) .++|||.-- |=.-.+++.|-++|+.|+...-... T Consensus 8 ~VcVTGAsG-fIgswivk~LL~rGY~V~gtVR~~~ 41 (327) T KOG1502 8 KVCVTGASG-FIGSWIVKLLLSRGYTVRGTVRDPE 41 (327) T ss_pred EEEEECCCH-HHHHHHHHHHHHCCCEEEEEECCCC T ss_conf 799948820-8999999999868998999970863 No 220 >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated Probab=94.14 E-value=0.24 Score=28.41 Aligned_cols=34 Identities=29% Similarity=0.332 Sum_probs=23.6 Q ss_pred CCCCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 988855699-99528478999999999999879889998 Q gi|254780622|r 1 MDLSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPV 38 (405) Q Consensus 1 m~l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv 38 (405) |+|+||+++ -|-+++|- ..+++.|.+.|+.|..+ T Consensus 4 ~~l~gK~alITG~s~GIG----~aia~~la~~Ga~V~~~ 38 (253) T PRK08220 4 MDFSGKTVWVTGAAQGIG----YAVALAFVEAGAKVIGF 38 (253) T ss_pred CCCCCCEEEEECCCCHHH----HHHHHHHHHCCCEEEEE T ss_conf 899999899958856899----99999999879999999 No 221 >PRK05693 short chain dehydrogenase; Provisional Probab=93.96 E-value=0.31 Score=27.73 Aligned_cols=46 Identities=17% Similarity=0.194 Sum_probs=29.4 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHHHH-----HHHHHHHHCCCCEEEEE Q ss_conf 79778984042010102135762157727889-----99999982588389984 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGH-----AIAKSLAYFGAEVILIS 239 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~-----~iA~~~~~~Ga~V~li~ 239 (405) .|.=|-|+|..-.-+. -+.+-.+.-|-+. +|+.|+...|-+|++|+ T Consensus 122 ~G~IVnisS~ag~~~~---p~~~~Y~aSK~Al~~~s~sLr~El~~~gI~V~~v~ 172 (274) T PRK05693 122 RGLVVNIGSVSGVLVT---PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQ 172 (274) T ss_pred CCEEEEEECCHHCCCC---CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE T ss_conf 9679998140532689---99737999999999999999998420287899997 No 222 >COG0623 FabI Enoyl-[acyl-carrier-protein] Probab=93.92 E-value=0.29 Score=27.96 Aligned_cols=40 Identities=28% Similarity=0.423 Sum_probs=27.0 Q ss_pred CCCCCCEEE-EEEEC--HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHH Q ss_conf 988855699-99528--47899999999999987988999858568630 Q gi|254780622|r 1 MDLSGKKIA-LIMCG--SVAVYKSLDLIRRLRERGAVVIPVMTKSAQKF 46 (405) Q Consensus 1 m~l~~k~Il-lgvtG--siaa~k~~~l~~~L~~~g~~V~vv~T~~A~~f 46 (405) +.|+|||+| .||-- ||| -.+++.|.++|+++ ++|...+++ T Consensus 2 g~L~GK~~lI~Gvan~rSIA----wGIAk~l~~~GAeL--~fTy~~e~l 44 (259) T COG0623 2 GLLEGKRILIMGVANNRSIA----WGIAKALAEQGAEL--AFTYQGERL 44 (259) T ss_pred CCCCCCEEEEEEECCCCCHH----HHHHHHHHHCCCEE--EEEECCHHH T ss_conf 76678658999732662179----99999999759879--998435888 No 223 >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] Probab=93.89 E-value=0.44 Score=26.75 Aligned_cols=187 Identities=20% Similarity=0.215 Sum_probs=97.0 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCCCCC--EEEEEH--- Q ss_conf 0179778984042010102135762157727889999999825883899841566--------776567--467546--- Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS--------IADPPN--VMTIHV--- 255 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~~~~~--~~~i~v--- 255 (405) ...++++|||+ .|+--|.++|+.+.++|++|.|+.-... +..-.+ +.++.+ T Consensus 3 ~~~~~~~lITG----------------ASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs 66 (265) T COG0300 3 PMKGKTALITG----------------ASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLS 66 (265) T ss_pred CCCCCEEEEEC----------------CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCC T ss_conf 77786799977----------------88648999999999779979999676999999999998730862799977678 Q ss_pred --HHHHHHHHHHHHC-CCCCEEEEEHHHHHHHHHHHHH-CCCCCCCCCCCCEEEE----EECHHHHHHHHHCCCCCCEEE Q ss_conf --5778999999850-5888799740444443222210-1123345577510455----218068988762148995899 Q gi|254780622|r 256 --ERAEDMLQEVLKA-LPVDIAVMVSAVSDWRFPKIAG-TKIKRKDIGDTMRIDL----MENPDILKIIGHHQCRPSIVV 327 (405) Q Consensus 256 --~t~~em~~~~~~~-~~~D~~I~aAAVSDf~~~~~~~-~Kikk~s~~~~l~L~L----~~~pdIL~~i~~~k~~~~~lV 327 (405) +....+.+.+... .+.|++|-+|-...|.+-...+ .+. .+.+++.+ .-|.-++..+.++..=..+-| T Consensus 67 ~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~-----~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI 141 (265) T COG0300 67 DPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEE-----EEMIQLNILALTRLTKAVLPGMVERGAGHIINI 141 (265) T ss_pred CHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHCCHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 836799999999824885238997787477665421885899-----999999999999999999999986589669998 Q ss_pred -EEECCC---C------------HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHH Q ss_conf -981141---2------------389999999997499899992057767777766118999836985972789989999 Q gi|254780622|r 328 -GFAAET---Q------------CIEQNAREKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVA 391 (405) Q Consensus 328 -GFkaET---~------------~l~~~A~~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA 391 (405) .+++.. . ..-+-.+.-|..+|.+.-+.|+=.-...||..+....+.... ....++=..+| T Consensus 142 ~S~ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~----~~~~~~~~~va 217 (265) T COG0300 142 GSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSP----GELVLSPEDVA 217 (265) T ss_pred ECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC----HHHCCCHHHHH T ss_conf 43453288863279999999999999999998358984999996573335533344443211232----12306999999 Q ss_pred HHHHHHHHH Q ss_conf 999999999 Q gi|254780622|r 392 DRLCHLIVE 400 (405) Q Consensus 392 ~~Il~~i~~ 400 (405) +.++..+.. T Consensus 218 ~~~~~~l~~ 226 (265) T COG0300 218 EAALKALEK 226 (265) T ss_pred HHHHHHHHC T ss_conf 999999850 No 224 >KOG1371 consensus Probab=93.85 E-value=0.23 Score=28.58 Aligned_cols=33 Identities=27% Similarity=0.347 Sum_probs=17.1 Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 556999952847899999999999987988999858 Q gi|254780622|r 5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT 40 (405) Q Consensus 5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T 40 (405) +++|| |||+- -|=.-+.+=+|.+.|.+|.+|=- T Consensus 2 ~~~VL--VtGga-GyiGsht~l~L~~~gy~v~~vDN 34 (343) T KOG1371 2 GKHVL--VTGGA-GYIGSHTVLALLKRGYGVVIVDN 34 (343) T ss_pred CCEEE--EECCC-CCEEHHHHHHHHHCCCCEEEEEC T ss_conf 83799--96687-63105999999867981799824 No 225 >PRK10538 3-hydroxy acid dehydrogenase; Provisional Probab=93.69 E-value=0.38 Score=27.15 Aligned_cols=63 Identities=19% Similarity=0.172 Sum_probs=27.7 Q ss_pred HHHHHHHHHHHCCCCEEEEECCCC------CCCCCCEEEE-----EHHHHHHHHHHHHHCC-CCCEEEEEHHHHH Q ss_conf 889999999825883899841566------7765674675-----4657789999998505-8887997404444 Q gi|254780622|r 220 QGHAIAKSLAYFGAEVILISGPVS------IADPPNVMTI-----HVERAEDMLQEVLKAL-PVDIAVMVSAVSD 282 (405) Q Consensus 220 ~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~~~~~i-----~v~t~~em~~~~~~~~-~~D~~I~aAAVSD 282 (405) .|.++|+.|...|++|.+..-... .+....+..+ +....+++.+.+.+.+ ..|++|.+|.++. T Consensus 12 IG~a~A~~la~~Ga~Vv~~~r~~~~l~~l~~~lg~~~~~~~~Dvsd~~~v~~~~~~~~~~~g~iDiLVnNAG~~~ 86 (248) T PRK10538 12 FGECITRRFIQNGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDILVNNAGLAL 86 (248) T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC T ss_conf 999999999987999999989999999999984886799997348889999999999997099759997785467 No 226 >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral Probab=93.65 E-value=0.59 Score=25.94 Aligned_cols=30 Identities=33% Similarity=0.438 Sum_probs=13.4 Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEE Q ss_conf 8885569999528478999999999999879889 Q gi|254780622|r 2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVV 35 (405) Q Consensus 2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V 35 (405) +|+|||+.+-=.|.+.-+ +++.|.+.|+.| T Consensus 20 ~l~g~~vaVqGfGnVG~~----~a~~l~~~Gakv 49 (217) T cd05211 20 SLEGLTVAVQGLGNVGWG----LAKKLAEEGGKV 49 (217) T ss_pred CCCCCEEEEECCCHHHHH----HHHHHHHCCCEE T ss_conf 857999999898899999----999999859989 No 227 >PRK09009 C factor cell-cell signaling protein; Provisional Probab=93.59 E-value=0.42 Score=26.90 Aligned_cols=71 Identities=17% Similarity=0.164 Sum_probs=44.1 Q ss_pred EEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---CCCCEEEEE--HHHHHHHHHHHHHC Q ss_conf 7898404201010213576215772788999999982588389984156677---656746754--65778999999850 Q gi|254780622|r 194 RALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA---DPPNVMTIH--VERAEDMLQEVLKA 268 (405) Q Consensus 194 ~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~---~~~~~~~i~--v~t~~em~~~~~~~ 268 (405) +||||+| |+=.|.++++.+..+|+++.+........ ...++..+. +...++.. .+.+. T Consensus 2 nVLITGa----------------s~GIG~aia~~l~~~~~~~~v~~~~~~~~~~~~~~~v~~~~~Dvt~~~~i~-~~~~~ 64 (235) T PRK09009 2 NILIVGG----------------SGGIGKAMVKQLLETYPDATVHATYRHHKPDFRHDNVQWHALDVTDEAEIK-QLSEQ 64 (235) T ss_pred EEEEECC----------------CHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHH-HHHHH T ss_conf 7999755----------------639999999999856998099997377654445798389987479999999-99987 Q ss_pred C-CCCEEEEEHHHH Q ss_conf 5-888799740444 Q gi|254780622|r 269 L-PVDIAVMVSAVS 281 (405) Q Consensus 269 ~-~~D~~I~aAAVS 281 (405) + ..|++|.+|.+- T Consensus 65 ~~~iD~linnAGi~ 78 (235) T PRK09009 65 FTQLDWLINCVGML 78 (235) T ss_pred HCCCCEEEECCCCC T ss_conf 08778999767524 No 228 >CHL00194 ycf39 Ycf39; Provisional Probab=93.54 E-value=0.46 Score=26.65 Aligned_cols=204 Identities=14% Similarity=0.133 Sum_probs=87.5 Q ss_pred EEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCEEE Q ss_conf 999952847899999999999987988999858568630698999997479758-2076788778774300114465578 Q gi|254780622|r 8 IALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVY-THLLSYKEGYESNHIQLANECDLLV 86 (405) Q Consensus 8 IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~-~~~~~~~~~~~~~Hi~l~~~aD~~i 86 (405) .++|-||-+- -.++++|.+.|++|+++.-. ..+. ..++.. |-++. -|+.+.+. .. ..-+-+|.++ T Consensus 4 LV~GATG~lG----r~vVr~Ll~~G~~Vr~lvRn-p~ka---~~l~~~-Gve~v~gDl~dpes---l~--~Al~GvdaVi 69 (319) T CHL00194 4 LVIGATGTLG----RQIVRRALDEGYQVKCLVRN-LRKA---AFLKEW-GAELVYGDLSLPET---IP--PALEGITAII 69 (319) T ss_pred EEECCCCHHH----HHHHHHHHHCCCCEEEEECC-HHHH---HHHHHC-CCEEEEECCCCHHH---HH--HHHCCCCEEE T ss_conf 9989985899----99999999688908999578-6763---234215-96799942788778---99--9965996799 Q ss_pred EEECCHH----HHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHH-HHH--HHHHHHH-HHHHC--CCCCCCCHHH Q ss_conf 8411188----89885202455214666752279968984056600000-388--9999999-86400--0134652125 Q gi|254780622|r 87 VAPASAN----FIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWA-KPA--TQRNVEI-LQKDG--CYFIGPESGA 156 (405) Q Consensus 87 VaPaTaN----tiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~-~p~--~~~nl~~-L~~~g--~~vi~P~~g~ 156 (405) .+..+.- ..-..-.--.-+++-+.-.+. =+.++..=+++..-+. .|. .+...++ |++.| +.|+-|.. . T Consensus 70 ~~~~~~~~~~~~~~~vd~~g~~~li~AAk~aG-Vkr~V~lS~lga~~~~~~p~~~~K~~~E~~L~~Sgl~~TIlRPs~-F 147 (319) T CHL00194 70 DASTSRPSDLNNAYQIDLEGKLALIEAAKAAK-VKRFIFFSILNAEQYPQVPLMKIKSDIEEKLKQSGINYTIFRLAG-F 147 (319) T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH-H T ss_conf 94566778862088988988999999999849-988999613566668875677879999999986799859984739-9 Q ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-EECCEEEEECCCCCHHHHHHHHHHHHCCCC- Q ss_conf 531032233343455899999998631013200179778984042010-102135762157727889999999825883- Q gi|254780622|r 157 MAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-PLDPMRYIANRSSGQQGHAIAKSLAYFGAE- 234 (405) Q Consensus 157 la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~- 234 (405) +- ..+.... ...+.+..|.+++|.++- || ++.=.+..++..+..-++. T Consensus 148 ~q--------------~l~~~~a-------~pi~~~~~v~~~~~~~~ia~I---------~~~DVA~~~a~aL~~~~~~g 197 (319) T CHL00194 148 FQ--------------GLISQYA-------IPILDSQTIWITGESTPIAYI---------DTQDAAKFALKSLSLPETKN 197 (319) T ss_pred HH--------------HHHHHHH-------HHHHCCCCEEECCCCCCCCCC---------CHHHHHHHHHHHHCCCCCCC T ss_conf 99--------------8899876-------776307857766998752887---------79999999999958977589 Q ss_pred -EEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCC Q ss_conf -89984156677656746754657789999998505 Q gi|254780622|r 235 -VILISGPVSIADPPNVMTIHVERAEDMLQEVLKAL 269 (405) Q Consensus 235 -V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~ 269 (405) ..-+.||- +-|..|+.+.+.+.. T Consensus 198 k~y~L~GP~------------a~T~~EIa~l~~~~~ 221 (319) T CHL00194 198 KTFPLVGPK------------SWNSSEIISLCEQLS 221 (319) T ss_pred CEEEEECCC------------CCCHHHHHHHHHHHH T ss_conf 899954986------------389999999999985 No 229 >PRK08267 short chain dehydrogenase; Provisional Probab=93.51 E-value=0.37 Score=27.26 Aligned_cols=19 Identities=32% Similarity=0.169 Sum_probs=8.9 Q ss_pred HHHHHHHHHHHCCCCEEEE Q ss_conf 8899999998258838998 Q gi|254780622|r 220 QGHAIAKSLAYFGAEVILI 238 (405) Q Consensus 220 ~G~~iA~~~~~~Ga~V~li 238 (405) .|.++|+.+...|++|.+. T Consensus 13 IG~a~A~~~a~~G~~V~~~ 31 (258) T PRK08267 13 IGRATARLFAARGWRVGAY 31 (258) T ss_pred HHHHHHHHHHHCCCEEEEE T ss_conf 9999999999879999999 No 230 >pfam00208 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Probab=93.50 E-value=0.27 Score=28.13 Aligned_cols=132 Identities=24% Similarity=0.279 Sum_probs=68.9 Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHC-----CHHHHHH---HHCCCCCCCCCCCCCCCCC Q ss_conf 8885569999528478999999999999879889998585686306-----9899999---7479758207678877877 Q gi|254780622|r 2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFI-----TPLIVGA---ISNRRVYTHLLSYKEGYES 73 (405) Q Consensus 2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi-----~~~~l~~---lt~~~v~~~~~~~~~~~~~ 73 (405) +|+|||+.+-=.|.+..+ .++.|.+.|+.|..| +++.--+. ....+.. ..+. .+.+........-. T Consensus 29 ~l~g~~v~IqGfGnVG~~----~a~~l~~~Gakvvav-sD~~G~i~~~~Gldi~~l~~~~~~~~~-~~~~~~~~~~~~i~ 102 (237) T pfam00208 29 SLEGKTVAVQGFGNVGSY----AAEKLLELGAKVVAV-SDSSGYIYDPNGIDIEELLELKEEGGG-RVVEYAGSGAEYIS 102 (237) T ss_pred CCCCCEEEEECCCHHHHH----HHHHHHHCCCEEEEE-ECCCCEEECCCCCCHHHHHHHHHHHCC-EEECCCCCCCEECC T ss_conf 878999999898899999----999999879969999-828767999999999999999997198-43124665753448 Q ss_pred CCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC Q ss_conf 43001144655788411188898852024552146667522799689840566000003889999999864000134652 Q gi|254780622|r 74 NHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPE 153 (405) Q Consensus 74 ~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~ 153 (405) +.--+...+|+++-| |+-|.|..- ....-++++++=.| ++|.+.+..+.|++.|+.++ |. T Consensus 103 ~~~~~~~~~DIliPa-A~~~~I~~~------------na~~i~ak~I~EgA------N~p~t~eA~~~L~~rgI~vi-PD 162 (237) T pfam00208 103 GEELWEIDCDILVPC-ATQNEINEE------------NAKLIKAKAVVEGA------NMPTTPEADEILEERGILYA-PD 162 (237) T ss_pred CCCCCCCCCCEEEEC-CCCCCCCHH------------HHHHCCCCEEEECC------CCCCCHHHHHHHHHCCCEEE-CH T ss_conf 710004766688644-556889989------------99862754897537------89889789999998899896-80 Q ss_pred HHHHHHCC Q ss_conf 12553103 Q gi|254780622|r 154 SGAMAESN 161 (405) Q Consensus 154 ~g~la~c~ 161 (405) . ++..| T Consensus 163 ~--laNAG 168 (237) T pfam00208 163 K--AANAG 168 (237) T ss_pred H--HHCCC T ss_conf 7--75287 No 231 >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Probab=93.45 E-value=0.38 Score=27.20 Aligned_cols=36 Identities=31% Similarity=0.386 Sum_probs=24.5 Q ss_pred CCCCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 988855699-99528478999999999999879889998585 Q gi|254780622|r 1 MDLSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 1 m~l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) |+|+||||+ +|+.||- .-.++.|.+.|++|.+.=.. T Consensus 1 m~~~~k~v~viGlG~sG-----~s~a~~L~~~G~~v~~~D~~ 37 (445) T PRK04308 1 MTFQNKKILVAGLGGTG-----ISMIAYLRKNGAEVAAYDAE 37 (445) T ss_pred CCCCCCEEEEEEECHHH-----HHHHHHHHHCCCEEEEEECC T ss_conf 99799989999989999-----99999999789919999799 No 232 >PRK06924 short chain dehydrogenase; Provisional Probab=93.30 E-value=0.37 Score=27.24 Aligned_cols=44 Identities=18% Similarity=0.154 Sum_probs=22.3 Q ss_pred CEEEEEECCCHHEECCEEEEECCCCCHHHH-----HHHHHHHHCCCCEEEEE Q ss_conf 778984042010102135762157727889-----99999982588389984 Q gi|254780622|r 193 KRALVTSGPTYEPLDPMRYIANRSSGQQGH-----AIAKSLAYFGAEVILIS 239 (405) Q Consensus 193 k~vlITaG~T~E~ID~VR~ItN~SSGk~G~-----~iA~~~~~~Ga~V~li~ 239 (405) .=|.|+++.... |....+..++-|-|. .+|.|+..++..|..++ T Consensus 135 ~IvnisS~a~~~---~~~~~~~Y~aSKaal~~ltk~lA~E~~~~~~~I~v~a 183 (251) T PRK06924 135 RVINISSGAAKN---PYFGWSAYCSSKAGLNMFTQTVATEQEEEEYPVKIIA 183 (251) T ss_pred CEEEEEEHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE T ss_conf 549997243258---9999769999999999999999998371599989999 No 233 >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. Probab=93.05 E-value=0.73 Score=25.34 Aligned_cols=225 Identities=20% Similarity=0.258 Sum_probs=103.2 Q ss_pred EEEEEEECHH-----HHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCC--CCCCCCCCCCCCCCCC- Q ss_conf 6999952847-----8999999999999879889998585686306989999974797582--0767887787743001- Q gi|254780622|r 7 KIALIMCGSV-----AVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYT--HLLSYKEGYESNHIQL- 78 (405) Q Consensus 7 ~IllgvtGsi-----aa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~--~~~~~~~~~~~~Hi~l- 78 (405) ||++-+-||- -.|++..|+++|++.|++|..+.+.....+.... ...+.+++. +...+.+. ...-+++ T Consensus 2 kI~fr~d~~~~iG~GH~~RclaLA~~l~~~g~~v~f~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 77 (280) T TIGR03590 2 RILFRADASSEIGLGHVMRCLTLARELRKRGAEVAFACKTLPGDLIDLI---LSAGFPVYVLPDTSSWQDD-ALELINLL 77 (280) T ss_pred EEEEEEECCCCEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHH---HHCCCCEEECCCCCCCCCC-HHHHHHHH T ss_conf 7999996789913208999999999999889949999927958899999---9759817981675652012-99999999 Q ss_pred -CCCCCEEEEE--ECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCH-HH----H--HH-HHHHHHHHHHHHC- Q ss_conf -1446557884--1118889885202455214666752279968984056600-00----0--38-8999999986400- Q gi|254780622|r 79 -ANECDLLVVA--PASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFM-MW----A--KP-ATQRNVEILQKDG- 146 (405) Q Consensus 79 -~~~aD~~iVa--PaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~-M~----~--~p-~~~~nl~~L~~~g- 146 (405) ...+|++|+= -.+.....++. ....++++.--++.. ++ - +| ....+...+...+ T Consensus 78 ~~~~~d~vIiD~y~~~~~~~~~lk--------------~~~~~~i~iDD~~~~~~~~d~vin~~~~~~~~~y~~~~~~~~ 143 (280) T TIGR03590 78 EKEKFDILIVDHYALDADWEKLIK--------------HFGRKLLVIDDLADRPHDCDLLLDQNPGADALDYQGLVPANC 143 (280) T ss_pred HHCCCCEEEEECCCCCHHHHHHHH--------------HHCCEEEEEECCCCCCCCCCEEECCCCCCCHHHHCCCCCCCC T ss_conf 737979999925999979999999--------------839839999367654656142541454447566364488676 Q ss_pred CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHH Q ss_conf 01346521255310322333434558999999986310132001797789840420101021357621577278899999 Q gi|254780622|r 147 CYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAK 226 (405) Q Consensus 147 ~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~ 226 (405) ..+.+|++- +..++ ... ...... .+ -.-++||||.||| ||-. ....+.+ T Consensus 144 ~~l~G~~Y~------------~lr~~-F~~-~~~~~~-~~---~~~~~Ili~~GGs----D~~~---------lt~~il~ 192 (280) T TIGR03590 144 RLLLGPSYA------------LLREE-FYQ-LRTANK-RR---KPLRRVLVSFGGA----DPDN---------LTLKLLS 192 (280) T ss_pred EEEECCCCC------------CCCHH-HHH-HHHHHH-CC---CCCCEEEEEECCC----CHHH---------HHHHHHH T ss_conf 698657534------------35788-876-303221-03---6553289997787----7000---------8999999 Q ss_pred HHHH--CCCCEEEEECCCCCCC---------CCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH Q ss_conf 9982--5883899841566776---------567467546577899999985058887997404444432 Q gi|254780622|r 227 SLAY--FGAEVILISGPVSIAD---------PPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRF 285 (405) Q Consensus 227 ~~~~--~Ga~V~li~g~~~~~~---------~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~ 285 (405) .+.. ....+++|.|+..... ..++.. ....++|.+.+. .+|+.|.++..+=|-. T Consensus 193 ~l~~~~~~~~i~vvig~~~~~~~~i~~~~~~~~~~~~--~~~~~~m~~~m~---~aDlaI~agG~t~~El 257 (280) T TIGR03590 193 ALAESQINISITLVTGSSNPNLDELKKFAKEYPNIIL--FIDVENMAELMN---EADLAIGAAGSTSWER 257 (280) T ss_pred HHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEE--ECCHHHHHHHHH---HCCEEEECCCHHHHHH T ss_conf 9985166856799986798766999999972899699--659889999999---7799998596589999 No 234 >PRK06718 precorrin-2 dehydrogenase; Reviewed Probab=93.03 E-value=0.74 Score=25.32 Aligned_cols=158 Identities=15% Similarity=0.171 Sum_probs=76.2 Q ss_pred CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 98885569999528478999999999999879889998585686306989999974797582076788778774300114 Q gi|254780622|r 1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLAN 80 (405) Q Consensus 1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~ 80 (405) ++|+||++|+.=.|.+|+.|+-. |.+.|+.|+||--+- ++...+......+ +-. .......+ | . T Consensus 6 l~l~gk~vLVVGGG~vA~rK~~~----Ll~~gA~VtVvsp~~-----~~el~~l~~~~~i-~~~---~~~~~~~d--l-~ 69 (202) T PRK06718 6 IDLSNKRVVIVGGGKVAGRRAIT----LLKYGAHITVISPEI-----TENLVKLVEEGKI-RWK---EKEFEPSD--I-V 69 (202) T ss_pred EECCCCEEEEECCCHHHHHHHHH----HHHCCCEEEEECCCC-----CHHHHHHHHCCCC-EEE---ECCCCHHH--H-C T ss_conf 98289869998898999999999----986899699986999-----9899999976994-476---16788667--5-1 Q ss_pred CCCEEEEEECCHHH-----HHHHH--C---CCCCCHHHHHHH--H-CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC Q ss_conf 46557884111888-----98852--0---245521466675--2-2799689840566000003889999999864000 Q gi|254780622|r 81 ECDLLVVAPASANF-----IAHVA--H---GMVYDLASAILL--A-KGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGC 147 (405) Q Consensus 81 ~aD~~iVaPaTaNt-----iaK~A--~---GiaD~llt~~~l--a-~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~ 147 (405) .++++ ..||-|. +++.+ + -.+|++-.+.+. + ..+-|+.++=+-+. .+|+..+.++.--+. T Consensus 70 ~~~lV--iaAT~d~~~N~~i~~~~~~~~lvNvvD~p~~~dFi~Paiv~rg~l~IaIST~G---~SP~lAr~iR~~lE~-- 142 (202) T PRK06718 70 DAFLV--IAATNDPRVNEAVAEALPENALFNVIGDAESGNVVFPSALHRGKLTISVSTDG---ASPKLAKKIRDELEA-- 142 (202) T ss_pred CCCEE--EECCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEEEEECCEEEEEECCC---CCHHHHHHHHHHHHH-- T ss_conf 67044--55279899999999986544875755786548278742785299899998899---783999999999998-- Q ss_pred CCCCCCHHHHHH----CCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 134652125531----03223334345589999999863 Q gi|254780622|r 148 YFIGPESGAMAE----SNGYGVGRMSEPCDIIRQITWLL 182 (405) Q Consensus 148 ~vi~P~~g~la~----c~~~G~grl~e~~~I~~~~~~~~ 182 (405) .+++.+|.+++ .=+.=+.+++++++=-....+.+ T Consensus 143 -~lp~~~~~~~~~~~~~R~~vk~~~~~~~~Rr~~~~~v~ 180 (202) T PRK06718 143 -LYDESYESYIDFLYECRQKIKELQIEKREKQILLQEVL 180 (202) T ss_pred -HCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH T ss_conf -73687999999999999999986799789999999994 No 235 >PRK07023 short chain dehydrogenase; Provisional Probab=92.92 E-value=0.52 Score=26.27 Aligned_cols=20 Identities=35% Similarity=0.391 Sum_probs=8.6 Q ss_pred HHHHHHHHHHHCCCCEEEEE Q ss_conf 88999999982588389984 Q gi|254780622|r 220 QGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 220 ~G~~iA~~~~~~Ga~V~li~ 239 (405) .|.++|+.+..+|++|.++. T Consensus 13 IG~aiA~~la~~G~~Vi~~~ 32 (243) T PRK07023 13 LGAALAEQLLQPGIAVLGVS 32 (243) T ss_pred HHHHHHHHHHHCCCEEEEEE T ss_conf 99999999998799999997 No 236 >COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] Probab=92.88 E-value=0.77 Score=25.19 Aligned_cols=157 Identities=23% Similarity=0.263 Sum_probs=81.1 Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 88855699995284789999999999998798899985856863069899999747975820767887787743001144 Q gi|254780622|r 2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANE 81 (405) Q Consensus 2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~ 81 (405) .|+||++|+.=+|++|.-|+-. |-+.|++|+|+--+. .|..-.+.-..++ ... +..... ... T Consensus 9 ~l~~k~VlvvGgG~va~rKa~~----ll~~ga~v~Vvs~~~-----~~el~~~~~~~~i-~~~---~~~~~~-----~~~ 70 (210) T COG1648 9 DLEGKKVLVVGGGSVALRKARL----LLKAGADVTVVSPEF-----EPELKALIEEGKI-KWI---EREFDA-----EDL 70 (210) T ss_pred ECCCCEEEEECCCHHHHHHHHH----HHHCCCEEEEECCCC-----CHHHHHHHHHCCC-CHH---HCCCCH-----HHH T ss_conf 8199779998998999999999----974699799987874-----4999999983485-310---022363-----653 Q ss_pred CCEEEEEECCHH-----HHHHHHCC------CCCCHH-HHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC Q ss_conf 655788411188-----89885202------455214-6667--522799689840566000003889999999864000 Q gi|254780622|r 82 CDLLVVAPASAN-----FIAHVAHG------MVYDLA-SAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGC 147 (405) Q Consensus 82 aD~~iVaPaTaN-----tiaK~A~G------iaD~ll-t~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~ 147 (405) .+.++|..||-| -+.+.|.- .+|++- +... ....+.|+.++=+-+. .+|..-+.+..--+ T Consensus 71 ~~~~lviaAt~d~~ln~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~G---~sP~la~~ir~~Ie--- 144 (210) T COG1648 71 DDAFLVIAATDDEELNERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIAISTGG---KSPVLARLLREKIE--- 144 (210) T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEECEEECCCCEEEEEECCC---CCHHHHHHHHHHHH--- T ss_conf 682499991699899999999999939935604884658566010543588799997799---77499999999999--- Q ss_pred CCCCCCHHHHHH----CCCCCCCCCCCHHHHHHHHHHHH Q ss_conf 134652125531----03223334345589999999863 Q gi|254780622|r 148 YFIGPESGAMAE----SNGYGVGRMSEPCDIIRQITWLL 182 (405) Q Consensus 148 ~vi~P~~g~la~----c~~~G~grl~e~~~I~~~~~~~~ 182 (405) ..++|..|..+. +-+.-++..++...--....+.+ T Consensus 145 ~~l~~~~~~~~~~~~~~R~~v~~~~~~~~~Rr~~~~~~~ 183 (210) T COG1648 145 ALLPPSLGEVAELAARLRERVKGSLPKGKERRRFWEKIF 183 (210) T ss_pred HHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH T ss_conf 975962469999999999998603676999999999997 No 237 >PRK08219 short chain dehydrogenase; Provisional Probab=92.76 E-value=0.52 Score=26.31 Aligned_cols=78 Identities=23% Similarity=0.226 Sum_probs=38.8 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-CC---CCCCEEEE--EHHHHHHHHHH Q ss_conf 79778984042010102135762157727889999999825883899841566-77---65674675--46577899999 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-IA---DPPNVMTI--HVERAEDMLQE 264 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-~~---~~~~~~~i--~v~t~~em~~~ 264 (405) ..|.+|||+| |+-.|.++|+++.+ |+.|.++.-... +. ...+...+ .+...++..+. T Consensus 2 ~mKvalITGa----------------s~GIG~aia~~la~-~g~vv~~~r~~~~l~~l~~~~~~~~~~~Dlt~~~~i~~~ 64 (226) T PRK08219 2 GMPTALITGA----------------SRGIGAAIARALAR-THTLLLAGRPSERLDAVAARLGATTWPADLTDPEAIAAA 64 (226) T ss_pred CCCEEEEECC----------------CHHHHHHHHHHHHH-CCCEEEEECCHHHHHHHHHHHCCCEEEECCCCHHHHHHH T ss_conf 7899999284----------------64999999999996-998999989889999999970993786057999999999 Q ss_pred HHHCCCCCEEEEEHHHHHHHH Q ss_conf 985058887997404444432 Q gi|254780622|r 265 VLKALPVDIAVMVSAVSDWRF 285 (405) Q Consensus 265 ~~~~~~~D~~I~aAAVSDf~~ 285 (405) +.+.-..|++|.+|.+..+.+ T Consensus 65 ~~~~~~iD~lVnnAG~~~~~~ 85 (226) T PRK08219 65 VEPLDRLDVLVHNAGVAELGP 85 (226) T ss_pred HHHCCCCCEEEECCCCCCCCC T ss_conf 996599889998996899987 No 238 >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase; InterPro: IPR013445 This entry contains CDP-glucose 4,6-dehydratases from a variety of Gram-negative and Gram-positive bacteria. Members are typically encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate CDP-D-glucose. This is used by the proteins in this entry to produce CDP-4-keto-6-deoxyglucose.. Probab=92.72 E-value=0.69 Score=25.48 Aligned_cols=34 Identities=35% Similarity=0.451 Sum_probs=20.6 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 17977898404201010213576215772788999999982588389984 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~ 239 (405) |+|||||||+ =||-=|--|-.=|..+||+|.=.+ T Consensus 2 w~gKkVl~TG----------------HTGFKGSWL~lWL~~lGA~V~GYS 35 (361) T TIGR02622 2 WQGKKVLITG----------------HTGFKGSWLSLWLLELGAEVAGYS 35 (361) T ss_pred CCCCEEEEEC----------------CCCCCHHHHHHHHHHCCCEEEEEE T ss_conf 5686789845----------------786425589999984796798971 No 239 >PRK07453 protochlorophyllide oxidoreductase; Validated Probab=92.72 E-value=0.44 Score=26.75 Aligned_cols=38 Identities=24% Similarity=0.290 Sum_probs=19.8 Q ss_pred CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 9888556999952847899999999999987988999858 Q gi|254780622|r 1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT 40 (405) Q Consensus 1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T 40 (405) |+-..|. -+.|||+-+=+ ..+.++.|.++|+.|...-- T Consensus 1 ~~~~~~~-TvvITGansGI-G~eta~~La~~ga~Vil~~R 38 (322) T PRK07453 1 MSQDAKG-TVLITGASSGV-GLYAAKALAKRGWHVIMACR 38 (322) T ss_pred CCCCCCC-EEEEECCCCHH-HHHHHHHHHHCCCEEEEEEC T ss_conf 9988998-39996888689-99999999978998999979 No 240 >PRK00045 hemA glutamyl-tRNA reductase; Reviewed Probab=92.71 E-value=0.46 Score=26.66 Aligned_cols=105 Identities=25% Similarity=0.260 Sum_probs=60.8 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-----CCCCCEEEEEHHHHHHHHH Q ss_conf 01797789840420101021357621577278899999998258838998415667-----7656746754657789999 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-----ADPPNVMTIHVERAEDMLQ 263 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-----~~~~~~~~i~v~t~~em~~ 263 (405) +|.+++|||-+ +|.||...++++..+|+.-..|+..+.. ....+...+ ..+++.+ T Consensus 179 ~l~~~~vlviG-----------------aGem~~l~~k~L~~~g~~~i~v~nRt~~ra~~la~~~~~~~~---~~~~l~~ 238 (429) T PRK00045 179 DLSGKKVLVIG-----------------AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGAEAI---PLEELPE 238 (429) T ss_pred CCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCEEE---CHHHHHH T ss_conf 81206599976-----------------748999999999855998499975867789999997598897---4999999 Q ss_pred HHHHCCCCCEEEEEHHHHHHHHHHHHHCCC-CCCCCCCCCEEEEEECHHHHHHH Q ss_conf 998505888799740444443222210112-33455775104552180689887 Q gi|254780622|r 264 EVLKALPVDIAVMVSAVSDWRFPKIAGTKI-KRKDIGDTMRIDLMENPDILKII 316 (405) Q Consensus 264 ~~~~~~~~D~~I~aAAVSDf~~~~~~~~Ki-kk~s~~~~l~L~L~~~pdIL~~i 316 (405) .+. .+|++|.|..-..|.+....-.+. ++......+-+.|---.||=..+ T Consensus 239 ~l~---~~DvvisaT~s~~~ii~~~~~~~~~~~r~~~~~~iiDLavPRdidp~v 289 (429) T PRK00045 239 ALA---EADIVISSTAAPHPIITKGMVERALKQRRHRPLLLIDLAVPRDIEPEV 289 (429) T ss_pred HHH---HCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCHHH T ss_conf 996---589999944899750279999999873469956999616887774434 No 241 >PRK07846 mycothione/glutathione reductase; Reviewed Probab=92.62 E-value=0.14 Score=29.95 Aligned_cols=77 Identities=13% Similarity=0.182 Sum_probs=57.1 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH-----HEECCEEEEECCC---------------CCHHH Q ss_conf 223334345589999999863101320017977898404201-----0102135762157---------------72788 Q gi|254780622|r 162 GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTY-----EPLDPMRYIANRS---------------SGQQG 221 (405) Q Consensus 162 ~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~-----E~ID~VR~ItN~S---------------SGk~G 221 (405) -.|.+|+.++..+.-... .....+..++++|-.|.+- ...|..|++|+.. .|-.| T Consensus 106 i~G~a~f~~~~~v~v~~~-----~~~~~i~a~~iiIATGS~P~~p~~~g~~~~~~~ts~~~l~l~~lP~~~~IIGgG~ig 180 (453) T PRK07846 106 YRGHARFVDADGLYTLRT-----GDGEEITADQIVIAAGSRPVIPPAIADSGVRYHTSDTIMRLPELPESLVIVGGGFIA 180 (453) T ss_pred EEEEEEECCCCEEEECCC-----CCCEEEEECEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCEEEEECCCHHH T ss_conf 984899915986786137-----984699816499902887778998665787798664300154388649998997579 Q ss_pred HHHHHHHHHCCCCEEEEECCCC Q ss_conf 9999999825883899841566 Q gi|254780622|r 222 HAIAKSLAYFGAEVILISGPVS 243 (405) Q Consensus 222 ~~iA~~~~~~Ga~V~li~g~~~ 243 (405) .++|..+...|.+||+|...-. T Consensus 181 ~E~A~~~~~lG~~Vtli~~~~~ 202 (453) T PRK07846 181 AEFAHVFSALGVRVTVVNRSDR 202 (453) T ss_pred HHHHHHHHHHCCEEEEEEECCC T ss_conf 9999999952992689974653 No 242 >PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed Probab=92.55 E-value=0.85 Score=24.91 Aligned_cols=153 Identities=18% Similarity=0.234 Sum_probs=86.8 Q ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH--------EECCEEEEECCCCCHHHHHH----HHHHHHCCCCEEEEE Q ss_conf 899999998631013200179778984042010--------10213576215772788999----999982588389984 Q gi|254780622|r 172 CDIIRQITWLLYKSKELLLKGKRALVTSGPTYE--------PLDPMRYIANRSSGQQGHAI----AKSLAYFGAEVILIS 239 (405) Q Consensus 172 ~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E--------~ID~VR~ItN~SSGk~G~~i----A~~~~~~Ga~V~li~ 239 (405) ..++..+...+ ....++++-+|+.. .=+|-||+++.+-|-||+.+ .-.+...+..|.+|. T Consensus 355 ~~~~~~l~~~~--------p~d~iv~~D~G~~~~~~~~~~~~~~p~~~~~~~g~G~mG~glpaAiGA~lA~p~r~Vv~i~ 426 (548) T PRK08978 355 PALLKQLSERK--------PADTVVTTDVGQHQMWVAQHMRFTRPENFITSAGLGTMGFGLPAAIGAQVARPDDTVICVS 426 (548) T ss_pred HHHHHHHHHHC--------CCCEEEEECCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE T ss_conf 99999999768--------9980999769950788877423679981422787776553588999988748999889998 Q ss_pred CCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCC-CCCCCCCCCEEEEEECHHHHHHHHH Q ss_conf 156677656746754657789999998505888799740444443222210112-3345577510455218068988762 Q gi|254780622|r 240 GPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKI-KRKDIGDTMRIDLMENPDILKIIGH 318 (405) Q Consensus 240 g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Ki-kk~s~~~~l~L~L~~~pdIL~~i~~ 318 (405) |-.+. --+.+|+..++...++.-++|+.=.--.. +.+.++... .+.+ ...|..+||.-+. .+ T Consensus 427 GDGsf----------~m~~~EL~Ta~r~~lpv~ivV~NN~~~g~-ir~~q~~~~~~~~~-----~~~l~~~pdf~~l-A~ 489 (548) T PRK08978 427 GDGSF----------MMNVQELGTIKRKQLPVKIVLLDNQRLGM-VRQWQQLFFDERYS-----ETDLSDNPDFVML-AS 489 (548) T ss_pred CCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCCHHH-HHHHHHHHCCCCCC-----CCCCCCCCCHHHH-HH T ss_conf 95076----------45299999999958995899996884078-99999976289877-----6777899899999-99 Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 14899589998114123899999999974998999 Q gi|254780622|r 319 HQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIV 353 (405) Q Consensus 319 ~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IV 353 (405) --. +-|+..++.+-++.|.++..+.+-=.+| T Consensus 490 a~G----~~g~rV~~~~el~~al~~al~~~~P~lI 520 (548) T PRK08978 490 AFG----IPGQTITRKDQVEAALDTLLNSEGPYLL 520 (548) T ss_pred HCC----CEEEEECCHHHHHHHHHHHHHCCCCEEE T ss_conf 779----9799969999999999999818996999 No 243 >PRK01747 mnmC 5-methylaminomethyl-2-thiouridine methyltransferase; Reviewed Probab=92.53 E-value=0.73 Score=25.35 Aligned_cols=98 Identities=27% Similarity=0.277 Sum_probs=50.6 Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH-H----HHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEE Q ss_conf 8405660000038899999998640001346521-2----5531032233343455899999998631013200179778 Q gi|254780622|r 121 IAPAMNFMMWAKPATQRNVEILQKDGCYFIGPES-G----AMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRA 195 (405) Q Consensus 121 iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~-g----~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~v 195 (405) ++|+-|..||. |-+-+++..|.+.|-.+..-.. | .|..+|=+ .-|. + -+.+|+= T Consensus 170 F~P~~np~mW~-~~~~~~~~~~~~~~~~~~T~taag~Vrr~L~~~GF~-v~k~------------------~-G~~~Kre 228 (660) T PRK01747 170 FAPAKNPDMWS-PNLFNALARLARPGATLATFTSAGFVRRGLQEAGFT-VKKV------------------K-GFGRKRE 228 (660) T ss_pred CCCCCCCCCCC-HHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCE-EEEC------------------C-CCCCCCC T ss_conf 78555823068-899999999728997588630458999999978966-9866------------------7-7887440 Q ss_pred EEEEC---CCHH-----------EECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 98404---2010-----------10213576215772788999999982588389984 Q gi|254780622|r 196 LVTSG---PTYE-----------PLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 196 lITaG---~T~E-----------~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~ 239 (405) .+.+= .+.. +.-+.|-+.=--.|-.|.++|.++.+||.+||++- T Consensus 229 ml~g~~~~~~~~~~~~~w~~~~~~~~~~~~VaVIGAGIAGas~A~~LA~rG~~VtVlD 286 (660) T PRK01747 229 MLVGVLEQSLPPPLAAPWFARPHSSKRNRDAAIIGGGIAGAALALALARRGWQVTLYE 286 (660) T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEE T ss_conf 3687716776777788642466655788718998938999999999997899689994 No 244 >pfam00582 Usp Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity. Probab=92.16 E-value=0.95 Score=24.60 Aligned_cols=114 Identities=18% Similarity=0.194 Sum_probs=55.4 Q ss_pred CEEEEEEECHHHHHHHHHHHHHH-HHCCCEEEEEECHHHHHH--CC-------HHHH----HH----------HHCCCCC Q ss_conf 56999952847899999999999-987988999858568630--69-------8999----99----------7479758 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRL-RERGAVVIPVMTKSAQKF--IT-------PLIV----GA----------ISNRRVY 61 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L-~~~g~~V~vv~T~~A~~f--i~-------~~~l----~~----------lt~~~v~ 61 (405) ||||+++-||-.+.++.+.+-.+ ++.|+++.++---....+ .. .... +. ..+..+. T Consensus 3 k~Ilv~vD~s~~s~~al~~A~~~a~~~~~~l~llhv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (140) T pfam00582 3 KRILVAVDGSEESERALEWALELAKRRGAELILLHVIDPEPSGAASEALEEEEEEELEEEEAEAEALAEAAAEAGGVVVE 82 (140) T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE T ss_conf 84999985999999999999999986499799999962887554443330357999999999999999998635798679 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEC Q ss_conf 20767887787743001144655788411188898852024552146667522799689840 Q gi|254780622|r 62 THLLSYKEGYESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAP 123 (405) Q Consensus 62 ~~~~~~~~~~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaP 123 (405) ...........+....-...+|++|+..-..+.+.++-.|=. +.-++-.+.+||++++ T Consensus 83 ~~~~~g~~~~~I~~~~~~~~~dliV~G~~~~~~~~~~~~Gs~----s~~v~~~~~~pVlvvk 140 (140) T pfam00582 83 VVVRGGDPAEAILEVAEEEDADLIVMGSRGRSGLRRLLLGSV----AEKVLRHAPCPVLVVR 140 (140) T ss_pred EEEEEECHHHHHCEEECCCCCCEEEEECCCCCCCCCCCCCHH----HHHHHHCCCCCEEEEC T ss_conf 999960703642100005678889992899986446501739----9999954899899969 No 245 >PRK07789 acetolactate synthase 1 catalytic subunit; Validated Probab=92.12 E-value=0.96 Score=24.57 Aligned_cols=177 Identities=14% Similarity=0.193 Sum_probs=101.8 Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHE--------ECCEEEEECCCCCHHHHHHH----HHHHHCCCCE Q ss_conf 34558999999986310132001797789840420101--------02135762157727889999----9998258838 Q gi|254780622|r 168 MSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEP--------LDPMRYIANRSSGQQGHAIA----KSLAYFGAEV 235 (405) Q Consensus 168 l~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~--------ID~VR~ItN~SSGk~G~~iA----~~~~~~Ga~V 235 (405) ...|..++..+.+.+. ...++++.+|+... -.|-+|++..+.|-||+.+. -.+...+..| T Consensus 397 ~i~p~~v~~~l~~~l~--------~d~ivv~d~G~~~~w~~~~~~~~~p~~~l~s~~~GsmG~glPaAiGA~lA~P~r~V 468 (612) T PRK07789 397 SLAPQYVIERLGEIAG--------PDAIYVAGVGQHQMWAAQFIDYEKPRTWLNSGGLGTMGYAVPAAMGAKVGRPDKEV 468 (612) T ss_pred CCCHHHHHHHHHHHCC--------CCCEEEECCCCHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCE T ss_conf 7399999999998669--------99779978985156788760013898341687654488899999999986899938 Q ss_pred EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEH----HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH Q ss_conf 9984156677656746754657789999998505888799740----444443222210112334557751045521806 Q gi|254780622|r 236 ILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVS----AVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD 311 (405) Q Consensus 236 ~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aA----AVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd 311 (405) .+|.|-.+. --|.+|+..++...++.-++|+.= .+..+.- ....+.. ... .+.-.....|| T Consensus 469 v~i~GDGsf----------~mt~qEL~Tavr~~lpi~ivV~NN~~yg~Ir~~Q~-~~~~~~~---~~~-~~~~~~~~~PD 533 (612) T PRK07789 469 WAIDGDGCF----------QMTNQELATCAIEGIPIKVALINNGNLGMVRQWQT-LFYEERY---SNT-DLNTGSHRIPD 533 (612) T ss_pred EEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH-HHCCCCC---CCC-CCCCCCCCCCC T ss_conf 999853686----------33299999999968994899996883068999999-8708875---655-46768788989 Q ss_pred HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH-CCCCEEEEECCCCC-----CCCCCCCCEEEE Q ss_conf 89887621489958999811412389999999997-49989999205776-----777776611899 Q gi|254780622|r 312 ILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLN-KGADFIVSNCILPD-----TGFVGKEWNKVS 372 (405) Q Consensus 312 IL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~-K~~D~IVAN~i~~~-----~~~fgsd~n~v~ 372 (405) .-+. .+- .. +-|+..++.+-++.|.++..+ +..=.+|-=.|+++ ...+|...++.+ T Consensus 534 f~~l-A~a--~G--~~g~rv~~~~el~~al~~Al~~~d~P~lIdv~vdp~~~~~P~~~~g~~~~~~~ 595 (612) T PRK07789 534 FVKL-AEA--LG--CVGLRCEREEDVDAVIEKARAINDRPVVIDFVVGADAMVWPMVAAGTSNDEIQ 595 (612) T ss_pred HHHH-HHH--CC--CEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHC T ss_conf 9999-997--79--87999799999999999998559995899999898877069889998989970 No 246 >PRK06467 dihydrolipoamide dehydrogenase; Reviewed Probab=92.10 E-value=0.2 Score=28.99 Aligned_cols=75 Identities=16% Similarity=0.208 Sum_probs=52.7 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH-----HEECCEEEEECC---------------CCCHHHH Q ss_conf 23334345589999999863101320017977898404201-----010213576215---------------7727889 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTY-----EPLDPMRYIANR---------------SSGQQGH 222 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~-----E~ID~VR~ItN~---------------SSGk~G~ 222 (405) .|.|++.++..+.-.- ..+...-+..++++|-.|.+- .+.|..+++++. -.|-.|. T Consensus 112 ~G~a~f~~~~~v~v~~----~~g~~~~l~a~~ivIATGs~p~~~p~~~~~~~~~~ts~~~l~l~~~P~~v~IiGgG~ig~ 187 (472) T PRK06467 112 NGLGKFTGGNTVEVTG----EDGKTEVIEFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPKRLLVMGGGIIGL 187 (472) T ss_pred CCCEEECCCCEEEEEC----CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCEEEEECCCHHHH T ss_conf 1506754898036433----888648998779999469966568998878875882366511013995599995647289 Q ss_pred HHHHHHHHCCCCEEEEECC Q ss_conf 9999998258838998415 Q gi|254780622|r 223 AIAKSLAYFGAEVILISGP 241 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~g~ 241 (405) ++|..+.+.|.+||+|+-. T Consensus 188 E~A~~~~~lG~~Vtli~~~ 206 (472) T PRK06467 188 EMGTVYHRLGSEVDVVEMF 206 (472) T ss_pred HHHHHHHHCCCEEEEEEEC T ss_conf 9999998529868999604 No 247 >PRK06115 dihydrolipoamide dehydrogenase; Reviewed Probab=92.05 E-value=0.29 Score=27.96 Aligned_cols=74 Identities=20% Similarity=0.347 Sum_probs=55.3 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEEECC---------------CCCHHHH Q ss_conf 233343455899999998631013200179778984042010-----10213576215---------------7727889 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYIANR---------------SSGQQGH 222 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~ItN~---------------SSGk~G~ 222 (405) .|.||+.++..+.-... .+.+..+..++++|-.|.+.- ++|..|++|+. ..|-.|. T Consensus 112 ~G~a~f~~~~~v~V~~~----~g~~~~i~a~~iiIATGs~P~~~pg~~~d~~~~~ts~~~~~l~~lPk~l~iiGgG~ig~ 187 (466) T PRK06115 112 KGWGRLDGVGKVVVKAE----DGSETQLEAKDIVIATGSEPTPLPGVTIDNQRIIDSTGALSLPEVPKHLVVIGAGVIGL 187 (466) T ss_pred EEEEEEECCCCEEEECC----CCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCEEEEECCCHHHH T ss_conf 52599954994189858----99779999568999989987699975659956971524003544896799995858999 Q ss_pred HHHHHHHHCCCCEEEEEC Q ss_conf 999999825883899841 Q gi|254780622|r 223 AIAKSLAYFGAEVILISG 240 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~g 240 (405) ++|..+...|.+||+|.- T Consensus 188 E~A~~~~~lG~~Vtlv~~ 205 (466) T PRK06115 188 ELGSVWRRLGAQVTVVEY 205 (466) T ss_pred HHHHHHHHCCCEEEEEEE T ss_conf 999999861984789983 No 248 >PRK07282 acetolactate synthase catalytic subunit; Reviewed Probab=92.02 E-value=0.99 Score=24.50 Aligned_cols=148 Identities=16% Similarity=0.213 Sum_probs=82.5 Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH--------EECCEEEEECCCCCHHHHHH----HHHHHHCCCC Q ss_conf 43455899999998631013200179778984042010--------10213576215772788999----9999825883 Q gi|254780622|r 167 RMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE--------PLDPMRYIANRSSGQQGHAI----AKSLAYFGAE 234 (405) Q Consensus 167 rl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E--------~ID~VR~ItN~SSGk~G~~i----A~~~~~~Ga~ 234 (405) +...|..++..+...+ .+.-++++-+|+.. .-+|-|+++..+-|-||+++ +-.+...+-. T Consensus 367 ~~i~p~~~~~~l~~~~--------~~d~ivv~D~G~~~~~~~~~~~~~~~~~~~~~~~~g~mG~glpaAiGA~lA~p~r~ 438 (566) T PRK07282 367 RVVQPQAVIERIGELT--------NGDAIVVTDVGQHQMWAAQYYPYQNERQLVTSGGLGTMGFGIPAAIGAKIANPDKE 438 (566) T ss_pred CCCCHHHHHHHHHHHC--------CCCCEEEEECCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCC T ss_conf 6769999999999767--------99978998087268999985677899732158987776661289999998289996 Q ss_pred EEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEE----HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH Q ss_conf 8998415667765674675465778999999850588879974----044444322221011233455775104552180 Q gi|254780622|r 235 VILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMV----SAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP 310 (405) Q Consensus 235 V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~a----AAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p 310 (405) |.+|.|-.+. --+.+|+..++...++.-++|+. ..+..+.- ...++.. .. -.+..+| T Consensus 439 Vv~i~GDG~f----------~m~~qEL~Ta~~~~lpv~ivV~NN~~yg~i~~~q~-~~~~~~~---~~-----~~~~~~p 499 (566) T PRK07282 439 VILFVGDGGF----------QMTNQELAILNIYKVPIKVVMLNNHSLGMVRQWQE-SFYEGRT---SE-----SVFDTLP 499 (566) T ss_pred EEEEECCCHH----------HCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH-HHCCCCC---CC-----CCCCCCC T ss_conf 8999668055----------41489999999958996899996883069999999-8608976---76-----5668999 Q ss_pred HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH Q ss_conf 689887621489958999811412389999999997 Q gi|254780622|r 311 DILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLN 346 (405) Q Consensus 311 dIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~ 346 (405) |.-+ +.+--. +-||..|+.+-++.|.+-+.. T Consensus 500 df~~-iA~a~G----~~~~rv~~~~eL~~aLea~~~ 530 (566) T PRK07282 500 DFQL-MAQAYG----IKHYKFDNPETLAQDLEVITE 530 (566) T ss_pred CHHH-HHHHCC----CEEEEECCHHHHHHHHHHHCC T ss_conf 9999-999779----879998999999999998778 No 249 >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] Probab=91.96 E-value=0.83 Score=24.97 Aligned_cols=73 Identities=25% Similarity=0.298 Sum_probs=40.1 Q ss_pred EEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC------CCCCC---CEEEEEHH---HHHHHHHHHHHCC-CCCEEE Q ss_conf 35762157727889999999825883899841566------77656---74675465---7789999998505-888799 Q gi|254780622|r 209 MRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS------IADPP---NVMTIHVE---RAEDMLQEVLKAL-PVDIAV 275 (405) Q Consensus 209 VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~------~~~~~---~~~~i~v~---t~~em~~~~~~~~-~~D~~I 275 (405) |=.||-.||| -|.++|+++...|++|.+..-... .+... ......|. +.+.+.+...+.+ +.|++| T Consensus 8 v~lITGASSG-iG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLv 86 (246) T COG4221 8 VALITGASSG-IGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILV 86 (246) T ss_pred EEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEE T ss_conf 8999468656-889999999978996999863688999999862567437896136788999999999997517605899 Q ss_pred EEHHHHH Q ss_conf 7404444 Q gi|254780622|r 276 MVSAVSD 282 (405) Q Consensus 276 ~aAAVSD 282 (405) ..|-++= T Consensus 87 NNAGl~~ 93 (246) T COG4221 87 NNAGLAL 93 (246) T ss_pred ECCCCCC T ss_conf 6687776 No 250 >PRK06416 dihydrolipoamide dehydrogenase; Reviewed Probab=91.92 E-value=0.29 Score=27.92 Aligned_cols=74 Identities=23% Similarity=0.341 Sum_probs=52.0 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEEECC---------------CCCHHHH Q ss_conf 233343455899999998631013200179778984042010-----10213576215---------------7727889 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYIANR---------------SSGQQGH 222 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~ItN~---------------SSGk~G~ 222 (405) .|.|++.++..+.-.. ....+.+..++++|-.|...- .+|..|++|+. -.|-.|. T Consensus 111 ~G~a~f~~~~~v~V~~-----~~~~~~~~a~~iIIATGs~P~~~pg~~~~~~~v~ts~~~~~l~~lPk~v~IiGgG~ig~ 185 (462) T PRK06416 111 RGEAKLVDPNTVRVKG-----EDGEQTYTAKNIILATGSRPRELPGIEFDGKRVITSDEALNLDEVPKSLVVIGGGYIGI 185 (462) T ss_pred EEEEEEECCCEEEEEE-----CCCCEEEEECEEEECCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCEEEEECCCHHHH T ss_conf 8389981276045553-----69966999486999989988779997878955984166457654797699988978788 Q ss_pred HHHHHHHHCCCCEEEEECC Q ss_conf 9999998258838998415 Q gi|254780622|r 223 AIAKSLAYFGAEVILISGP 241 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~g~ 241 (405) ++|..+...|.+||+|... T Consensus 186 E~A~~~~~lG~~Vtli~~~ 204 (462) T PRK06416 186 EFASAYASLGAEVTIIEAL 204 (462) T ss_pred HHHHHHHHHCCEEEEEECC T ss_conf 9999999739768997405 No 251 >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional Probab=91.90 E-value=0.93 Score=24.67 Aligned_cols=17 Identities=35% Similarity=0.657 Sum_probs=8.6 Q ss_pred CCCHHHHHHHHHHHHCC Q ss_conf 77278899999998258 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFG 232 (405) Q Consensus 216 SSGk~G~~iA~~~~~~G 232 (405) |+|..|.+|.+++..+| T Consensus 8 a~GqLG~~l~~~l~~~~ 24 (299) T PRK09987 8 KTGQVGWELQRALAPLG 24 (299) T ss_pred CCCHHHHHHHHHHHHCC T ss_conf 99978999999866509 No 252 >pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate. Probab=91.66 E-value=0.37 Score=27.23 Aligned_cols=76 Identities=22% Similarity=0.242 Sum_probs=45.8 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-------CC-CCCEEEEEHHHHHH Q ss_conf 01797789840420101021357621577278899999998258838998415667-------76-56746754657789 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-------AD-PPNVMTIHVERAED 260 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-------~~-~~~~~~i~v~t~~e 260 (405) +|+|+++||-+ .|.||..+++++..+|+.-.++.+.+.. .. ...+..+. .++ T Consensus 9 ~l~~~~vlVIG-----------------aG~~~~~~~~~L~~~g~~~i~v~nRt~~ka~~la~~~~~~~~~~~~---~~~ 68 (134) T pfam01488 9 DLKGKKVLLIG-----------------AGEMARLAAKHLLSKGAKKITIANRTLEKAKELAEEFGGEEVEALP---LDE 68 (134) T ss_pred CCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEE---CHH T ss_conf 81489899999-----------------6099999999999759988999547578999999984997258985---135 Q ss_pred HHHHHHHCCCCCEEEEEHHHHHHHHHH Q ss_conf 999998505888799740444443222 Q gi|254780622|r 261 MLQEVLKALPVDIAVMVSAVSDWRFPK 287 (405) Q Consensus 261 m~~~~~~~~~~D~~I~aAAVSDf~~~~ 287 (405) +.+.+. ++|++|.|.+...|.+.+ T Consensus 69 l~~~l~---~~DivI~aT~s~~~ii~~ 92 (134) T pfam01488 69 LEELLA---EADIVISATSAPTPIITK 92 (134) T ss_pred HHHHHH---HCCEEEEECCCCCCEECH T ss_conf 441363---199999925999736489 No 253 >pfam02882 THF_DHG_CYH_C Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain. Probab=91.58 E-value=0.99 Score=24.49 Aligned_cols=74 Identities=22% Similarity=0.241 Sum_probs=53.6 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCE Q ss_conf 58999999986310132001797789840420101021357621577278899999998258838998415667765674 Q gi|254780622|r 171 PCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNV 250 (405) Q Consensus 171 ~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~ 250 (405) |..|++-+.++ .-+++||+++|-+- |..-|.-||.-+..+||.||..|..+. T Consensus 20 p~ai~~lL~~~-----~i~l~Gk~vvViGr----------------S~iVG~Pla~lL~~~~atVtichs~T~------- 71 (159) T pfam02882 20 PRGIMELLKRY-----GIDLAGKNVVVIGR----------------SNIVGKPLALLLLNANATVTVCHSKTK------- 71 (159) T ss_pred HHHHHHHHHHC-----CCCCCCCEEEEECC----------------CCHHHHHHHHHHHHCCCEEEEECCCCC------- T ss_conf 99999999983-----99857866999888----------------731489999999877998999818999------- Q ss_pred EEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH Q ss_conf 6754657789999998505888799740444443 Q gi|254780622|r 251 MTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWR 284 (405) Q Consensus 251 ~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~ 284 (405) ++.+. ..++|++|.|+-...|- T Consensus 72 ---------nl~~~---~~~ADIvI~A~G~p~~i 93 (159) T pfam02882 72 ---------DLAEI---TREADIVVVAVGKPGLI 93 (159) T ss_pred ---------CHHHH---HHCCCEEEEECCCCCCC T ss_conf ---------97896---30034442315885505 No 254 >KOG4169 consensus Probab=91.57 E-value=0.91 Score=24.71 Aligned_cols=79 Identities=32% Similarity=0.425 Sum_probs=53.4 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC----------CCCCCCCEEEEE--HH Q ss_conf 017977898404201010213576215772788999999982588389984156----------677656746754--65 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV----------SIADPPNVMTIH--VE 256 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~----------~~~~~~~~~~i~--v~ 256 (405) +|.||++++|+|. |--|.+.++++..+|+.|..|--.. ...++..+-.++ |. T Consensus 2 ~~tGKna~vtgga----------------gGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt 65 (261) T KOG4169 2 DLTGKNALVTGGA----------------GGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVT 65 (261) T ss_pred CCCCCEEEEECCC----------------CHHHHHHHHHHHHCCCHHEEEHHHHHCHHHHHHHHCCCCCCEEEEEEECCC T ss_conf 4137458996378----------------636699999999767154061040147899998860399843999980120 Q ss_pred HHHH---HHHHHHHCCC-CCEEEEEHHHHHH Q ss_conf 7789---9999985058-8879974044444 Q gi|254780622|r 257 RAED---MLQEVLKALP-VDIAVMVSAVSDW 283 (405) Q Consensus 257 t~~e---m~~~~~~~~~-~D~~I~aAAVSDf 283 (405) .-.| .++++...+. .|++|-.|-|+|= T Consensus 66 ~~~~~~~~f~ki~~~fg~iDIlINgAGi~~d 96 (261) T KOG4169 66 NRGDLEAAFDKILATFGTIDILINGAGILDD 96 (261) T ss_pred CHHHHHHHHHHHHHHHCCEEEEECCCCCCCC T ss_conf 0788999999999870945799716644461 No 255 >PRK07069 short chain dehydrogenase; Validated Probab=91.55 E-value=0.52 Score=26.26 Aligned_cols=99 Identities=20% Similarity=0.223 Sum_probs=54.0 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCC---------C--CCCCC-E-----EEEEHHHHHHHHHHHHHCCC-CCEEEEEH Q ss_conf 727889999999825883899841566---------7--76567-4-----67546577899999985058-88799740 Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVILISGPVS---------I--ADPPN-V-----MTIHVERAEDMLQEVLKALP-VDIAVMVS 278 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~li~g~~~---------~--~~~~~-~-----~~i~v~t~~em~~~~~~~~~-~D~~I~aA 278 (405) |+-.|.++|+.+...||+|.+..-... + ..... . .+.+-+..+.+.+.+.+.+. .|++|.+| T Consensus 8 s~GIG~aia~~la~~Ga~V~i~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDilVNnA 87 (251) T PRK07069 8 AGGLGRAIARRMAEQGARVFLTDINDAAALDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNA 87 (251) T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECC T ss_conf 78899999999998699999996894358999999998615996399995779999999999999999829998999899 Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH----HHHHHHHHC Q ss_conf 44444322221011233455775104552180----689887621 Q gi|254780622|r 279 AVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP----DILKIIGHH 319 (405) Q Consensus 279 AVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p----dIL~~i~~~ 319 (405) ++....+.. .+.-+.+...+.+.|.-.- -.+..+.++ T Consensus 88 Gi~~~~~~~----~~~~~~w~~~~~vNl~g~f~~~~~~~p~m~~~ 128 (251) T PRK07069 88 GVGSFGAIE----QIELDEWRRVMAINVESIVLGCKHALPYLRAS 128 (251) T ss_pred CCCCCCCCH----HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC T ss_conf 999999903----49999999999999789999999999999966 No 256 >pfam03446 NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase. The NAD binding domain of 6-phosphogluconate dehydrogenase adopts a Rossmann fold. Probab=91.50 E-value=0.93 Score=24.65 Aligned_cols=22 Identities=27% Similarity=0.289 Sum_probs=15.3 Q ss_pred CCHHHHHHHHHHHHCCCCEEEE Q ss_conf 7278899999998258838998 Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVILI 238 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~li 238 (405) -|.||..+|+.+.+.|++|... T Consensus 9 lG~MG~~ma~~L~~~g~~v~v~ 30 (163) T pfam03446 9 LGVMGSPMALNLLKAGYTVTVY 30 (163) T ss_pred EHHHHHHHHHHHHHCCCEEEEE T ss_conf 6798999999999779969999 No 257 >PRK06370 mercuric reductase; Validated Probab=91.49 E-value=0.22 Score=28.67 Aligned_cols=70 Identities=27% Similarity=0.472 Sum_probs=51.7 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEEECC---------------CCCHHHH Q ss_conf 233343455899999998631013200179778984042010-----10213576215---------------7727889 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYIANR---------------SSGQQGH 222 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~ItN~---------------SSGk~G~ 222 (405) .|.|++.++..+.- ....+..++++|-.|.+.- -+|.++|+|+. -.|-.|. T Consensus 113 ~G~a~f~~~~tv~v---------~~~~~~a~~iiIATGs~p~~p~ipG~~~~~~~ts~~~~~l~~~P~~v~ViGgG~ig~ 183 (459) T PRK06370 113 RGHARFEGPNTVRV---------GGELLRAKRIFINTGARAAVPPIPGLDEVGYLTNETVFSLDELPEHLAVIGGGYIGL 183 (459) T ss_pred EEEEEECCCCCCCC---------CCEEEEEEEEEECCCCCCCCCCCCCCCCCCEECCHHHHCCCCCCCEEEEECCCHHHH T ss_conf 96899715675356---------985997628998889865457778878787874468737154895499989847799 Q ss_pred HHHHHHHHCCCCEEEEECC Q ss_conf 9999998258838998415 Q gi|254780622|r 223 AIAKSLAYFGAEVILISGP 241 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~g~ 241 (405) ++|..+...|.+||+|+-. T Consensus 184 E~A~~~~~~G~~Vtlv~~~ 202 (459) T PRK06370 184 EFAQAFRRFGSEVTVVERG 202 (459) T ss_pred HHHHHHHHHCCEEEEEEEC T ss_conf 9999999639889999965 No 258 >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional Probab=91.37 E-value=1 Score=24.47 Aligned_cols=73 Identities=25% Similarity=0.215 Sum_probs=50.9 Q ss_pred HHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHH Q ss_conf 99986310132001797789840420101021357621577278899999998258838998415667765674675465 Q gi|254780622|r 177 QITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVE 256 (405) Q Consensus 177 ~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~ 256 (405) .+..++... ..+|+||+|+|-+ -|..-|.-+|.-+..+||.||..|..+. T Consensus 14 av~~ll~~y-~i~l~Gk~vvVvG----------------rS~~VG~Pla~lL~~~~atVt~~hs~t~------------- 63 (140) T cd05212 14 AVKELLNKE-GVRLDGKKVLVVG----------------RSGIVGAPLQCLLQRDGATVYSCDWKTI------------- 63 (140) T ss_pred HHHHHHHHH-CCCCCCCEEEEEC----------------CCCHHHHHHHHHHHHCCCEEEEECCCCC------------- T ss_conf 999999980-9999999999999----------------9812499999999978898999469995------------- Q ss_pred HHHHHHHHHHHCCCCCEEEEEHHHHHHHH Q ss_conf 77899999985058887997404444432 Q gi|254780622|r 257 RAEDMLQEVLKALPVDIAVMVSAVSDWRF 285 (405) Q Consensus 257 t~~em~~~~~~~~~~D~~I~aAAVSDf~~ 285 (405) ++.+. ..++|++|.|+-+..+-. T Consensus 64 ---~l~~~---~~~ADIvI~a~G~p~~i~ 86 (140) T cd05212 64 ---QLQSK---VHDADVVVVGSPKPEKVP 86 (140) T ss_pred ---CHHHH---HHHCCEEEECCCCCCCCC T ss_conf ---98998---523499998168767278 No 259 >KOG0725 consensus Probab=91.28 E-value=0.87 Score=24.85 Aligned_cols=35 Identities=51% Similarity=0.650 Sum_probs=21.0 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 017977898404201010213576215772788999999982588389984 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~ 239 (405) .|+||.+|||+|.+ | .|.++|+.|.+.||+|+... T Consensus 5 ~l~gkvalVTG~s~---------------G-IG~aia~~la~~Ga~v~i~~ 39 (270) T KOG0725 5 RLAGKVALVTGGSS---------------G-IGKAIALLLAKAGAKVVITG 39 (270) T ss_pred CCCCCEEEEECCCC---------------C-HHHHHHHHHHHCCCEEEEEE T ss_conf 56887899979998---------------1-58999999998799899984 No 260 >pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Probab=91.28 E-value=0.76 Score=25.22 Aligned_cols=30 Identities=13% Similarity=0.150 Sum_probs=21.5 Q ss_pred EEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 9999528478999999999999879889998585 Q gi|254780622|r 8 IALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 8 IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) .++|-||.+- -.+++.|.+.|++|+++.-. T Consensus 2 lV~GatG~iG----~~vv~~L~~~g~~Vr~l~R~ 31 (232) T pfam05368 2 LVFGATGYQG----GSVVRASLKAGHPVRALVRD 31 (232) T ss_pred EEECCCHHHH----HHHHHHHHHCCCCEEEEECC T ss_conf 9989682899----99999998589938999718 No 261 >PTZ00079 NADP-specific glutamate dehydrogenase; Provisional Probab=91.25 E-value=1.2 Score=23.97 Aligned_cols=54 Identities=24% Similarity=0.374 Sum_probs=40.5 Q ss_pred CCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC-CCCCCCCEEEEEH Q ss_conf 1320017977898404201010213576215772788999999982588389984156-6776567467546 Q gi|254780622|r 185 SKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPV-SIADPPNVMTIHV 255 (405) Q Consensus 185 ~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~-~~~~~~~~~~i~v 255 (405) .....|+||+|+|.+ +|.-|..-|+.+...|+.|.-++.+. .+-.|.|+..-.+ T Consensus 245 ~~~~~l~gk~vaIqG-----------------fGNVg~~aA~kl~e~GakVVavSDs~G~Iy~~~Gid~e~l 299 (469) T PTZ00079 245 SLNIVVEKKTAVVSG-----------------SGNVAQYCVEKLLQLGAKVLTLSDSNGYIVEPNGFTEEKL 299 (469) T ss_pred HCCCCCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHH T ss_conf 679985788899976-----------------6738999999999769989999838943988898899999 No 262 >pfam08659 KR KR domain. This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Probab=91.17 E-value=0.68 Score=25.52 Aligned_cols=70 Identities=19% Similarity=0.206 Sum_probs=40.9 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCC--C-----------CCCCEEEE--EH---HHHHHHHHHHHHCC-CCCEEEEE Q ss_conf 7278899999998258838998415667--7-----------65674675--46---57789999998505-88879974 Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVILISGPVSI--A-----------DPPNVMTI--HV---ERAEDMLQEVLKAL-PVDIAVMV 277 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~--~-----------~~~~~~~i--~v---~t~~em~~~~~~~~-~~D~~I~a 277 (405) |+=.|.++|+.+..+|+++..+.+.... + ....+..+ .+ +..+++.+.+.+.+ +.|++|++ T Consensus 9 s~GIG~aia~~la~~Ga~~vvl~~r~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnn 88 (181) T pfam08659 9 LGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVSDRDAVAALLAEIRADGPPLRGVIHA 88 (181) T ss_pred CCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEE T ss_conf 87899999999998799789998689766299999999999659969999756899999998886579873984899954 Q ss_pred HHHHHHHHH Q ss_conf 044444322 Q gi|254780622|r 278 SAVSDWRFP 286 (405) Q Consensus 278 AAVSDf~~~ 286 (405) |.+..+.+- T Consensus 89 AG~~~~~~~ 97 (181) T pfam08659 89 AGVLRDALL 97 (181) T ss_pred CCCCCCCCH T ss_conf 466788568 No 263 >PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Probab=90.55 E-value=0.86 Score=24.90 Aligned_cols=70 Identities=19% Similarity=0.209 Sum_probs=36.9 Q ss_pred CCCCCEEEE-EEECH-HHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCC Q ss_conf 888556999-95284-78999999999999879889998585686306989999974-7975820767887787743001 Q gi|254780622|r 2 DLSGKKIAL-IMCGS-VAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAIS-NRRVYTHLLSYKEGYESNHIQL 78 (405) Q Consensus 2 ~l~~k~Ill-gvtGs-iaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt-~~~v~~~~~~~~~~~~~~Hi~l 78 (405) +++||||++ |..+| .| .++.|.+.|++|.+.=++.. +...+.+. +-+++. +.. +-+. T Consensus 3 d~~~k~v~V~GlG~sG~s------~~~~L~~~G~~v~~~D~~~~-----~~~~~~l~~~~~~~~---g~~------~~~~ 62 (438) T PRK03806 3 DYQGKNVVIIGLGLTGLS------CVDFFLARGVTPRVMDTRMT-----PPGLDKLPENVERHT---GSL------NDEW 62 (438) T ss_pred CCCCCEEEEEEECHHHHH------HHHHHHHCCCEEEEEECCCC-----CHHHHHHHCCCCEEE---CCC------CHHH T ss_conf 778998999945788899------99999978996999989999-----005788645884665---777------9668 Q ss_pred CCCCCEEEEEECC Q ss_conf 1446557884111 Q gi|254780622|r 79 ANECDLLVVAPAS 91 (405) Q Consensus 79 ~~~aD~~iVaPaT 91 (405) -..+|++|+.|.= T Consensus 63 ~~~~d~vV~SPGI 75 (438) T PRK03806 63 LLAADLIVASPGI 75 (438) T ss_pred HCCCCEEEECCCC T ss_conf 0679999989978 No 264 >PRK07525 sulfoacetaldehyde acetyltransferase; Validated Probab=90.54 E-value=1.4 Score=23.56 Aligned_cols=148 Identities=19% Similarity=0.123 Sum_probs=82.1 Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH--------HEECCEEEEECCCCCHHHHHHHH----HHHHCCCCE Q ss_conf 345589999999863101320017977898404201--------01021357621577278899999----998258838 Q gi|254780622|r 168 MSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTY--------EPLDPMRYIANRSSGQQGHAIAK----SLAYFGAEV 235 (405) Q Consensus 168 l~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~--------E~ID~VR~ItN~SSGk~G~~iA~----~~~~~Ga~V 235 (405) ...|..++..+...+- ...++++-+|+. ..-.|-|++++.+.|-||+.+.- .+...+-.| T Consensus 385 ~i~p~~~~~~l~~~lp--------~d~iiv~D~G~~~~~~~~~~~~~~p~~~~~~~~~G~mG~glpaAiGa~lA~p~~~V 456 (589) T PRK07525 385 YMHPRQALRAIQKALP--------EDAIVSTDIGNNCSIANSYLRFEKGRKYLAPGSFGNCGYAFPAIIGAKIACPDRPV 456 (589) T ss_pred CCCHHHHHHHHHHHCC--------CCCEEEECCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCE T ss_conf 6289999999997669--------98489946721899999975404887165047656532257899999985899968 Q ss_pred EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH-HHCCCCCCCCCCCCEEEEEECHHHHH Q ss_conf 99841566776567467546577899999985058887997404444432222-10112334557751045521806898 Q gi|254780622|r 236 ILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKI-AGTKIKRKDIGDTMRIDLMENPDILK 314 (405) Q Consensus 236 ~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~-~~~Kikk~s~~~~l~L~L~~~pdIL~ 314 (405) .+|.|-.+. --+.+|+..++...++.-++|+.=.- |-.... +..... +.....+|.++||.-+ T Consensus 457 v~i~GDG~f----------~m~~~EL~Ta~r~~lpv~ivV~NN~~--yg~~~~~q~~~~~----~~~~~~~~~~~~df~~ 520 (589) T PRK07525 457 VGFAGDGAW----------GISMNEMTTCVRHNWPVTAVVFRNYQ--WGAEKKNQTDFYN----NRFVGTELDNNVSYAG 520 (589) T ss_pred EEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCC--CHHHHHHHHHHHC----CCEECCCCCCCCCHHH T ss_conf 999885687----------55299999999978892899997883--3489999998718----8412032699989899 Q ss_pred HHHHCCCCCCEEEEEECCCCHHHHHHHHHH Q ss_conf 876214899589998114123899999999 Q gi|254780622|r 315 IIGHHQCRPSIVVGFAAETQCIEQNAREKL 344 (405) Q Consensus 315 ~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl 344 (405) . .+--. +=|+..|+.+-++.|.+.. T Consensus 521 ~-A~a~G----~~g~rV~~~~el~~al~~A 545 (589) T PRK07525 521 I-ARAMG----AEGVVVDTQEELGPALKRA 545 (589) T ss_pred H-HHHCC----CEEEEECCHHHHHHHHHHH T ss_conf 9-99779----8799989999999999999 No 265 >PRK12446 N-acetylglucosaminyl transferase; Reviewed Probab=90.53 E-value=0.37 Score=27.27 Aligned_cols=39 Identities=26% Similarity=0.225 Sum_probs=29.1 Q ss_pred CEEEEEEECHH-HHHHHHHHHHHHHHCCCEEEEEECHHHH Q ss_conf 56999952847-8999999999999879889998585686 Q gi|254780622|r 6 KKIALIMCGSV-AVYKSLDLIRRLRERGAVVIPVMTKSAQ 44 (405) Q Consensus 6 k~IllgvtGsi-aa~k~~~l~~~L~~~g~~V~vv~T~~A~ 44 (405) |||++.-.|.- -.|-+.-++++|++.|++|..+-|+.+. T Consensus 2 kkIii~~GGTGGHi~Palala~~L~~~~~~v~~ig~~~g~ 41 (352) T PRK12446 2 KKIVFTGGGSAGHVTPNLAIIPKLIEDNWDISYIGSHQGI 41 (352) T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHH T ss_conf 8799995875888999999999998489959999889605 No 266 >PRK00726 murG N-acetylglucosaminyl transferase; Provisional Probab=90.40 E-value=0.38 Score=27.19 Aligned_cols=38 Identities=37% Similarity=0.412 Sum_probs=29.7 Q ss_pred CEEEEEEECH-HHHHHHHHHHHHHHHCCCEEEEEECHHH Q ss_conf 5699995284-7899999999999987988999858568 Q gi|254780622|r 6 KKIALIMCGS-VAVYKSLDLIRRLRERGAVVIPVMTKSA 43 (405) Q Consensus 6 k~IllgvtGs-iaa~k~~~l~~~L~~~g~~V~vv~T~~A 43 (405) |||++...|+ --.|-+.-++++|++.|++|..+-|+.. T Consensus 2 kkI~i~~GGTGGHi~Palala~~L~~~g~ev~~ig~~~g 40 (359) T PRK00726 2 KKILLAGGGTGGHVFPALALAEELKKRGWEVLWLGTKRG 40 (359) T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH T ss_conf 889999588689999999999999838798999978826 No 267 >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] Probab=90.31 E-value=1.3 Score=23.78 Aligned_cols=30 Identities=20% Similarity=0.364 Sum_probs=20.1 Q ss_pred EEEECHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 9952847899999999999987988999858 Q gi|254780622|r 10 LIMCGSVAVYKSLDLIRRLRERGAVVIPVMT 40 (405) Q Consensus 10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T 40 (405) +.|||+- -|=.-+.+++|.+.|++|.|+=. T Consensus 3 iLVtGGA-GYIGSHtv~~Ll~~G~~vvV~DN 32 (329) T COG1087 3 VLVTGGA-GYIGSHTVRQLLKTGHEVVVLDN 32 (329) T ss_pred EEEECCC-CHHHHHHHHHHHHCCCEEEEEEC T ss_conf 9996586-54689999999978984899956 No 268 >TIGR01179 galE UDP-glucose 4-epimerase; InterPro: IPR005886 Synonym: UDP-galactose 4-epimerase UDP-glucose 4-epimerase (5.1.3.2 from EC) interconverts UDP-glucose and UDP-galactose which are precursors of glucose- and galactose-containing exopolysaccharides (EPS). A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded and described by a separate model. ; GO: 0003978 UDP-glucose 4-epimerase activity, 0006012 galactose metabolic process. Probab=90.26 E-value=0.98 Score=24.52 Aligned_cols=231 Identities=15% Similarity=0.133 Sum_probs=113.5 Q ss_pred EEEECHHHHHHHHHHHHHHHHCCCEEEEE--ECHHHHHHCCHHHHHHHHCCCC---CCCCCCCCCCCCCCC-CCCCCCCC Q ss_conf 99528478999999999999879889998--5856863069899999747975---820767887787743-00114465 Q gi|254780622|r 10 LIMCGSVAVYKSLDLIRRLRERGAVVIPV--MTKSAQKFITPLIVGAISNRRV---YTHLLSYKEGYESNH-IQLANECD 83 (405) Q Consensus 10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv--~T~~A~~fi~~~~l~~lt~~~v---~~~~~~~~~~~~~~H-i~l~~~aD 83 (405) |-|||+ |=|=-=+.+|.|-+.|++|-|. +|.+..++|. .++.++|+++ .-|+.|...-...-| -+|....| T Consensus 2 iLVTGG-AGYIGSHt~~~Ll~~G~ev~vlDNLs~G~~~~l~--~~~~~~G~~~~fv~gDL~D~~~l~~~f~kqql~~~id 78 (341) T TIGR01179 2 ILVTGG-AGYIGSHTVRQLLESGYEVVVLDNLSNGSAEALK--RGEEITGKEVTFVEGDLRDRELLRRVFEKQQLEHKID 78 (341) T ss_pred EEEEEC-CCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHC--CCCEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCC T ss_conf 268614-6644358878876359728998157888488750--0234148532058717515799999987743116754 Q ss_pred EEEEEECC------------------HHHHH---HH-HCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHH-HHH----- Q ss_conf 57884111------------------88898---85-2024552146667522799689840566000003-889----- Q gi|254780622|r 84 LLVVAPAS------------------ANFIA---HV-AHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAK-PAT----- 135 (405) Q Consensus 84 ~~iVaPaT------------------aNtia---K~-A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~-p~~----- 135 (405) ++|=.-+. -|||. -+ .+|+-+=..|+++.-++...- +--.+.|-.+ |+. T Consensus 79 AViHFAg~~~VgESv~~Pl~YY~NNv~nTl~L~~~m~~~GV~~~iFSSsAaVYG~p~~---~Pi~E~~pl~~PinPYG~s 155 (341) T TIGR01179 79 AVIHFAGLIAVGESVQKPLKYYRNNVVNTLNLLEAMQETGVKKFIFSSSAAVYGEPES---IPISEDSPLGDPINPYGRS 155 (341) T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCC---CCCCCCCCCCCCCCCCCCC T ss_conf 6752011212525575245440004689999999999818974153042145077885---5502225677874866556 Q ss_pred H-------HHHHHH-HHHCCC------CCCCCHHHHHHCC-CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC Q ss_conf 9-------999998-640001------3465212553103-223334345589999999863101320017977898404 Q gi|254780622|r 136 Q-------RNVEIL-QKDGCY------FIGPESGAMAESN-GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSG 200 (405) Q Consensus 136 ~-------~nl~~L-~~~g~~------vi~P~~g~la~c~-~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG 200 (405) + +-+++- ..|.+. +.+-.. .| +.|..--++|..++..++....-. +.=|=--| T Consensus 156 KlM~E~iL~D~~~a~~~~~~v~LRYFNv~GA~p-----~GY~iGe~~~~~tNhLip~~~~~A~G~-------~~~l~IFG 223 (341) T TIGR01179 156 KLMVERILRDLSKADPDLSYVILRYFNVAGADP-----EGYEIGEDPPGITNHLIPYACQVAVGK-------RDKLTIFG 223 (341) T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC-----CCCCCCCCCCCCCCCHHHHHHHHHCCC-------CCCCEECC T ss_conf 688999999998738767799850578514488-----877236685202941899999984489-------97313624 Q ss_pred CCHHEECC--EE---EEECCCCCHHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCC Q ss_conf 20101021--35---76215772788999999982588389984-156677656746754657789999998505888 Q gi|254780622|r 201 PTYEPLDP--MR---YIANRSSGQQGHAIAKSLAYFGAEVILIS-GPVSIADPPNVMTIHVERAEDMLQEVLKALPVD 272 (405) Q Consensus 201 ~T~E~ID~--VR---~ItN~SSGk~G~~iA~~~~~~Ga~V~li~-g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D 272 (405) .=+.-.|- || ...=.+.| ...|.+.+..|.+..... |..+ =.|..|+.+++.+..-.| T Consensus 224 tDYPT~DGTcvRDYIHV~DLA~A---H~~Al~~L~~g~~s~~~NlG~G~-----------G~SV~EVi~a~~~vsG~~ 287 (341) T TIGR01179 224 TDYPTPDGTCVRDYIHVMDLAEA---HLAALEYLENGGESHVYNLGYGQ-----------GFSVLEVIEAFKKVSGKD 287 (341) T ss_pred CCCCCCCCCEEEEEEECCCHHHH---HHHHHHHHHCCCCEEEEECCCCC-----------CCCHHHHHHHHHHHCCCE T ss_conf 87876798765300200207778---99999998607963698624675-----------410999999986610981 No 269 >PRK13940 glutamyl-tRNA reductase; Provisional Probab=90.25 E-value=0.95 Score=24.60 Aligned_cols=79 Identities=13% Similarity=0.210 Sum_probs=50.0 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC---CCCEEEEEHHHHHHHHHHH Q ss_conf 0179778984042010102135762157727889999999825883899841566776---5674675465778999999 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIAD---PPNVMTIHVERAEDMLQEV 265 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~---~~~~~~i~v~t~~em~~~~ 265 (405) +|.+++|||-+ .|.||...++++..+|+.-..|.+.+.... -..+....+...+++.+.+ T Consensus 178 ~l~~~~vlvvG-----------------aGem~~l~~k~L~~~g~~~i~v~nRt~~ra~~la~~~~~~~~~~~~~l~~~l 240 (414) T PRK13940 178 NISSKNVLIIG-----------------AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLI 240 (414) T ss_pred CCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHH T ss_conf 71228389966-----------------8647899999999769987999457567799999970888501699999998 Q ss_pred HHCCCCCEEEEEHHHHHHHHHH Q ss_conf 8505888799740444443222 Q gi|254780622|r 266 LKALPVDIAVMVSAVSDWRFPK 287 (405) Q Consensus 266 ~~~~~~D~~I~aAAVSDf~~~~ 287 (405) ..+|++|.|.+..+|.+.. T Consensus 241 ---~~aDivisaT~a~~~ii~~ 259 (414) T PRK13940 241 ---KKADIIIAAVNVLEYIVTC 259 (414) T ss_pred ---HHCCEEEEECCCCHHHCCH T ss_conf ---6388799816982444048 No 270 >TIGR01777 yfcH conserved hypothetical protein TIGR01777; InterPro: IPR010099 This entry represents proteins of unknown function including the Escherichia coli YfcH protein.. Probab=90.22 E-value=0.43 Score=26.83 Aligned_cols=110 Identities=14% Similarity=0.109 Sum_probs=62.9 Q ss_pred C-CCHHHHHHHHHHHHCCCCEEEEECCCC-CCCCCCEEEEEHHHH----HHHHHHHH--HCCCCCEEEEEHHHHHHHHHH Q ss_conf 7-727889999999825883899841566-776567467546577----89999998--505888799740444443222 Q gi|254780622|r 216 S-SGQQGHAIAKSLAYFGAEVILISGPVS-IADPPNVMTIHVERA----EDMLQEVL--KALPVDIAVMVSAVSDWRFPK 287 (405) Q Consensus 216 S-SGk~G~~iA~~~~~~Ga~V~li~g~~~-~~~~~~~~~i~v~t~----~em~~~~~--~~~~~D~~I~aAAVSDf~~~~ 287 (405) + ||-.|.+|+.++..+|++|+.++=... ............... -+|.+ -. ....+|++|+-|=-+=+.| + T Consensus 6 gnTGfiG~~L~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~W~~l~~~DaviNLAG~~i~~P-~ 83 (307) T TIGR01777 6 GNTGFIGRALTQRLTKSGHEVTILTRSPQAESNTKKVGYKNWLAEGKLGIVIAE-SGWSALEGADAVINLAGEPIADP-K 83 (307) T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCH-HCCCCCCCCCEEEECCCCCCCCC-C T ss_conf 330237899999998479989999616864320002554455552212452072-20566788627985568885778-8 Q ss_pred HHHCCCCCCCCCCCCEEEEEECHHHHHHHHH---CCCCCCEEEEEEC Q ss_conf 2101123345577510455218068988762---1489958999811 Q gi|254780622|r 288 IAGTKIKRKDIGDTMRIDLMENPDILKIIGH---HQCRPSIVVGFAA 331 (405) Q Consensus 288 ~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~---~k~~~~~lVGFka 331 (405) +=..+.|+ .. +.=++..|.-+...|.+ .+.++.++|-=+| T Consensus 84 RWt~~~K~-~i---~~SRi~~T~~L~~~i~~~~r~~~~P~~~isaSA 126 (307) T TIGR01777 84 RWTEERKQ-EI---RDSRIDTTRALVEAIAAAPRAEQKPKVFISASA 126 (307) T ss_pred CCCHHHHH-HH---HHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEE T ss_conf 87877757-56---523347899999999846566788716885016 No 271 >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] Probab=90.20 E-value=0.99 Score=24.48 Aligned_cols=99 Identities=20% Similarity=0.256 Sum_probs=61.6 Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC Q ss_conf 33343455899999998631013200179778984042010102135762157727889999999825883899841566 Q gi|254780622|r 164 GVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS 243 (405) Q Consensus 164 G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~ 243 (405) |.|...=+..-++...+.+. +|++++|||-+ -|.||...|+++..+|....+|.+.+. T Consensus 155 ~~~~VSi~saAv~lA~~~~~-----~L~~~~vlvIG-----------------AGem~~lva~~L~~~g~~~i~IaNRT~ 212 (414) T COG0373 155 GKGAVSISSAAVELAKRIFG-----SLKDKKVLVIG-----------------AGEMGELVAKHLAEKGVKKITIANRTL 212 (414) T ss_pred CCCCCCHHHHHHHHHHHHHC-----CCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCCEEEEECCCH T ss_conf 88861239999999999836-----54467699986-----------------518999999999858987799975878 Q ss_pred CCCCCCEEE--EEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH Q ss_conf 776567467--54657789999998505888799740444443222 Q gi|254780622|r 244 IADPPNVMT--IHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPK 287 (405) Q Consensus 244 ~~~~~~~~~--i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~ 287 (405) .....=.+. ..+.+.+|+...+. ++|++|++-+-..|.+.. T Consensus 213 erA~~La~~~~~~~~~l~el~~~l~---~~DvVissTsa~~~ii~~ 255 (414) T COG0373 213 ERAEELAKKLGAEAVALEELLEALA---EADVVISSTSAPHPIITR 255 (414) T ss_pred HHHHHHHHHHCCEEECHHHHHHHHH---HCCEEEEECCCCCCCCCH T ss_conf 9999999983870221877887652---079999906998554078 No 272 >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase; InterPro: IPR011912 Lipopolysaccharides (LPS) are glycolipids that consitutes the outer monolayer of the outer membranes of most Gram-negative bacteria . They consist of lipid A (endotoxin) which anchors LPS to the outer membrane, a non-repeating core oligosachharide, and an immunogenic O-antigen repeat polymer, which is an oligosaccharide of 1-40 units that variesbetween different strains of bacteria. Although the O-antigen and most of the core domain are not necessary for growth in the lab, they appear to help bacteria resist environmental stresses including the complement system and antibiotics. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of LPS in Gram-negative bacteria . This enzyme is homologous to UDP-glucose 4-epimerase (IPR005886 from INTERPRO) and belongs to the NAD dependent epimerase/dehydratase family. It participates in the biosynthetic pathway leading to incorporation of heptose, a conserved sugar, into the core region of LPS, performing the reaction shown below:ADP-D-glycero-D-manno-heptose = ADP-L-glycero-D-manno-heptose It is a homopentameric enzyme with each monomer composed of two domains: an N-terminal modified Rossman fold domain for NADP binding, and a C-terminal substrate binding domain.; GO: 0008712 ADP-glyceromanno-heptose 6-epimerase activity, 0050661 NADP binding, 0005975 carbohydrate metabolic process. Probab=90.18 E-value=0.92 Score=24.68 Aligned_cols=114 Identities=16% Similarity=0.186 Sum_probs=54.1 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHH--CCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHH Q ss_conf 017977898404201010213576215772788999999982--588389984156677656746754657789999998 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAY--FGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVL 266 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~--~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~ 266 (405) .+.|.|--=--||-..+ -|+|..-+.+.+.+ .|-.|.|.-+. +....+|=+...+...+|--+..+ T Consensus 184 q~~GLrYFNVYGP~E~H-----------KG~MASv~f~~~~q~~~~~~v~LF~~~-~~~~~dGeQ~RDFVYV~DV~~~n~ 251 (353) T TIGR02197 184 QVVGLRYFNVYGPREYH-----------KGKMASVAFHLFNQIKAGGNVKLFKSH-KEGFKDGEQLRDFVYVKDVVKVNL 251 (353) T ss_pred CEEEEEECCCCCCCCCC-----------CCCHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCCCCCCCEEHHHHHHHHH T ss_conf 42410211346888675-----------443699999988899737882023566-858988781101155276999999 Q ss_pred HCCC----CCEE---EEE----HHHHHHHHHHHH--HCC-CCCCCCCCCCEEEEEECHHHHH Q ss_conf 5058----8879---974----044444322221--011-2334557751045521806898 Q gi|254780622|r 267 KALP----VDIA---VMV----SAVSDWRFPKIA--GTK-IKRKDIGDTMRIDLMENPDILK 314 (405) Q Consensus 267 ~~~~----~D~~---I~a----AAVSDf~~~~~~--~~K-ikk~s~~~~l~L~L~~~pdIL~ 314 (405) ..++ +-++ --- -++++-...... .++ ++-++.-+...|+..+.|+-|+ T Consensus 252 ~~~~~~~~SGifN~GtG~ArsF~dla~a~~~~~~~~~~~~LSl~~lv~~~~i~Yi~~Pe~lr 313 (353) T TIGR02197 252 WLLENPSKSGIFNVGTGKARSFNDLADAVFKALGTNKGEPLSLKELVEDFKIEYIDMPEALR 313 (353) T ss_pred HHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEECCCHHHH T ss_conf 99848898415644778886689999999998731468885779887306720102835740 No 273 >PRK06953 short chain dehydrogenase; Provisional Probab=90.11 E-value=1.5 Score=23.33 Aligned_cols=14 Identities=36% Similarity=0.638 Sum_probs=7.1 Q ss_pred HHHHHHHHCCCEEE Q ss_conf 99999998798899 Q gi|254780622|r 23 DLIRRLRERGAVVI 36 (405) Q Consensus 23 ~l~~~L~~~g~~V~ 36 (405) .+++.|.++|+.|. T Consensus 16 a~a~~la~~G~~V~ 29 (222) T PRK06953 16 EFVRQYRADGWRVI 29 (222) T ss_pred HHHHHHHHCCCEEE T ss_conf 99999998889999 No 274 >pfam01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family. The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Probab=89.95 E-value=1.5 Score=23.24 Aligned_cols=19 Identities=21% Similarity=0.188 Sum_probs=13.3 Q ss_pred HHHHHHHHHHCCC--EEEEEE Q ss_conf 9999999998798--899985 Q gi|254780622|r 21 SLDLIRRLRERGA--VVIPVM 39 (405) Q Consensus 21 ~~~l~~~L~~~g~--~V~vv~ 39 (405) .-.|+++|.++|+ +|+++- T Consensus 10 Gs~lv~~Ll~~g~~~~V~~~d 30 (280) T pfam01073 10 GRHIVRLLLREGELQEVRVFD 30 (280) T ss_pred HHHHHHHHHHCCCCCEEEEEE T ss_conf 999999999779975799987 No 275 >COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Probab=89.64 E-value=1.3 Score=23.75 Aligned_cols=76 Identities=16% Similarity=0.253 Sum_probs=55.7 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEEECCC---------------CCHHH Q ss_conf 2233343455899999998631013200179778984042010-----102135762157---------------72788 Q gi|254780622|r 162 GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYIANRS---------------SGQQG 221 (405) Q Consensus 162 ~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~ItN~S---------------SGk~G 221 (405) -.|.|++-++..+.-.-. ...-+..++|+|..|..-- .+|..|+++|.. .|--| T Consensus 112 i~G~a~f~~~~~v~V~~~------~~~~~~a~~iiIATGS~p~~~~~~~~~~~~~~~s~~~l~~~~lP~~lvIiGgG~IG 185 (454) T COG1249 112 IRGEARFVDPHTVEVTGE------DKETITADNIIIATGSRPRIPPGPGIDGARILDSSDALFLLELPKSLVIVGGGYIG 185 (454) T ss_pred EEEEEEECCCCEEEEECC------CCEEEEECEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCHHH T ss_conf 998999888998999068------75499827899906998778998898887488353413601079879998988899 Q ss_pred HHHHHHHHHCCCCEEEEECCCC Q ss_conf 9999999825883899841566 Q gi|254780622|r 222 HAIAKSLAYFGAEVILISGPVS 243 (405) Q Consensus 222 ~~iA~~~~~~Ga~V~li~g~~~ 243 (405) .++|..+...|.+||+|...-. T Consensus 186 ~E~a~~~~~LG~~VTive~~~~ 207 (454) T COG1249 186 LEFASVFAALGSKVTVVERGDR 207 (454) T ss_pred HHHHHHHHHCCCCEEEEECCCC T ss_conf 9999999986997899946887 No 276 >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Probab=89.48 E-value=1.7 Score=23.02 Aligned_cols=75 Identities=20% Similarity=0.161 Sum_probs=36.4 Q ss_pred CCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 8855699-995284789999999999998798899985856863069899999747975820767887787743001144 Q gi|254780622|r 3 LSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANE 81 (405) Q Consensus 3 l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~ 81 (405) |+||||+ +|+.+|- .+ .++.|.+.|++|.+.=..... -++.+ +.+....+... .+..+ ... +.+. T Consensus 7 ~~~k~i~viGlG~sG---~s--~a~~L~~~G~~V~~~D~~~~~--~~~~~-~~l~~~gi~~~-~g~~~---~~~--~~~~ 72 (450) T PRK02472 7 FQNKKVLVLGLAKSG---YA--AAKLLHKLGANVTVNDGKPFS--ENPAA-QELLEEGIKVI-CGSHP---LEL--LDEN 72 (450) T ss_pred CCCCEEEEEEECHHH---HH--HHHHHHHCCCEEEEEECCCCC--CCHHH-HHHHHCCCEEE-ECCCH---HHH--CCCC T ss_conf 589989999778999---99--999999886989998488665--79899-99996799899-78880---786--0578 Q ss_pred CCEEEEEECC Q ss_conf 6557884111 Q gi|254780622|r 82 CDLLVVAPAS 91 (405) Q Consensus 82 aD~~iVaPaT 91 (405) .|++|+.|+= T Consensus 73 ~d~vV~SPgI 82 (450) T PRK02472 73 FDLMVKNPGI 82 (450) T ss_pred CCEEEECCCC T ss_conf 8799989987 No 277 >COG0452 Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism] Probab=89.41 E-value=0.53 Score=26.23 Aligned_cols=52 Identities=17% Similarity=0.148 Sum_probs=21.9 Q ss_pred HCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCC---CCCEEEEEHHHHH Q ss_conf 2588389984156677656746754657789999998505---8887997404444 Q gi|254780622|r 230 YFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKAL---PVDIAVMVSAVSD 282 (405) Q Consensus 230 ~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~---~~D~~I~aAAVSD 282 (405) ..|..|....||+.. .+..++.+.-.++.-|--++.+.. -+++-..+.+++. T Consensus 181 l~gk~Vlit~G~t~E-~idpvr~itn~ssGk~g~alA~a~~~~GA~V~lv~g~~~~ 235 (392) T COG0452 181 LKGKKVLITAGPTRE-YIDPVRFISNRSSGKMGFALAAAAKRRGASVTLVSGPTSL 235 (392) T ss_pred CCCCEEEEECCCCCC-CCCCEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCC T ss_conf 269779874798665-7662012124445545689999999769825881487767 No 278 >PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Probab=89.38 E-value=0.73 Score=25.35 Aligned_cols=75 Identities=16% Similarity=0.137 Sum_probs=36.7 Q ss_pred CCCCCEEEEEEEC-HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 8885569999528-478999999999999879889998585686306989999974797582076788778774300114 Q gi|254780622|r 2 DLSGKKIALIMCG-SVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLAN 80 (405) Q Consensus 2 ~l~~k~IllgvtG-siaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~ 80 (405) .+++|+|++.=-| |- .-++|.|.+.|++|.+.=++... -....++.. +.++ +..... . .-.+-. T Consensus 4 ~~~~k~vlV~GlG~sG-----~a~a~~L~~~G~~V~~~D~~~~~--~~~~~l~~~-~~~~--~~~~g~----~-~~~~~~ 68 (501) T PRK02006 4 DRQRPMVLVLGLGESG-----LAMARWCARHGCRLRVADTREAP--PNLAALQAE-GIDA--EFVGGA----F-DPALLD 68 (501) T ss_pred CCCCCEEEEEEECHHH-----HHHHHHHHHCCCEEEEEECCCCC--CCHHHHHHC-CCCC--EEECCC----C-CHHHHC T ss_conf 6689839998336889-----99999999789849999899998--619999860-8981--897788----9-867846 Q ss_pred CCCEEEEEECC Q ss_conf 46557884111 Q gi|254780622|r 81 ECDLLVVAPAS 91 (405) Q Consensus 81 ~aD~~iVaPaT 91 (405) .+|++|+.|.= T Consensus 69 ~~d~vV~SPGI 79 (501) T PRK02006 69 GVELVALSPGL 79 (501) T ss_pred CCCEEEECCEE T ss_conf 89999989900 No 279 >TIGR01139 cysK cysteine synthase A; InterPro: IPR005859 This model discriminates cysteine synthase A (CysK) and cysteine synthase B (CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblance to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded. Cysteine synthase (O-acetylserine (thiol)-lyase, 2.5.1.47 from EC) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysK differs from CysM in that it can also use sulphide instead of thiosulphate, to produce cysteine instead of cysteine thiosulphonate. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine. Probab=89.34 E-value=0.61 Score=25.83 Aligned_cols=112 Identities=19% Similarity=0.285 Sum_probs=70.4 Q ss_pred CCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHHHC Q ss_conf 65578841118889885202455214666752279968984056600000388999999986400013-46521255310 Q gi|254780622|r 82 CDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYF-IGPESGAMAES 160 (405) Q Consensus 82 aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~v-i~P~~g~la~c 160 (405) .+-.||=|.|.|| ||+ |..++.|.+-| +++ .|...| ..|=-+.|+.+|..+ +-|-... T Consensus 58 ~G~~IvEpTSGNT------GIa---LAmvAAArGYk-lil--tMPetM-----S~ERr~lL~ayGAeLvLTpg~~G---- 116 (312) T TIGR01139 58 PGKTIVEPTSGNT------GIA---LAMVAAARGYK-LIL--TMPETM-----SIERRKLLKAYGAELVLTPGAEG---- 116 (312) T ss_pred CCCEEEECCCCCH------HHH---HHHHHHHHCCE-EEE--ECCCCH-----HHHHHHHHHHCCCEEEECCCCCC---- T ss_conf 8888982377732------699---99999871894-999--867432-----68999999870965887281237---- Q ss_pred CCCCCCCCCCHHHHHHHHH-HH-HHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCC--CCHHHHHHHHHHHHCCCCE- Q ss_conf 3223334345589999999-86-31013200179778984042010102135762157--7278899999998258838- Q gi|254780622|r 161 NGYGVGRMSEPCDIIRQIT-WL-LYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRS--SGQQGHAIAKSLAYFGAEV- 235 (405) Q Consensus 161 ~~~G~grl~e~~~I~~~~~-~~-~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~S--SGk~G~~iA~~~~~~Ga~V- 235 (405) .+|-...=++|++..= .+ +.++-+ | ..|+. -=.||-+|.+..--+| .| T Consensus 117 ---MkGAI~KA~Ei~~~~Pn~y~m~~QF~----N-------------------pANP~~Hr~TTg~EIw~d~dg~G-~~D 169 (312) T TIGR01139 117 ---MKGAIAKAEEIAESTPNSYFMLQQFE----N-------------------PANPEIHRKTTGPEIWRDTDGKG-RLD 169 (312) T ss_pred ---CHHHHHHHHHHHHHCCCCEEECCCCC----C-------------------CCHHHHHHHCCHHHHHHHHCCCC-CEE T ss_conf ---66678999999986879265224578----7-------------------22147616202789999627898-311 Q ss_pred EEEECC Q ss_conf 998415 Q gi|254780622|r 236 ILISGP 241 (405) Q Consensus 236 ~li~g~ 241 (405) .+|+|- T Consensus 170 ~FVaG~ 175 (312) T TIGR01139 170 AFVAGV 175 (312) T ss_pred EEEEEE T ss_conf 799732 No 280 >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional Probab=89.29 E-value=1.7 Score=22.93 Aligned_cols=183 Identities=22% Similarity=0.244 Sum_probs=85.0 Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC-HHHHHHCCHHHHHHHH--CCCCCCCCCCCCCCC------- Q ss_conf 888556999952847899999999999987988999858-5686306989999974--797582076788778------- Q gi|254780622|r 2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT-KSAQKFITPLIVGAIS--NRRVYTHLLSYKEGY------- 71 (405) Q Consensus 2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T-~~A~~fi~~~~l~~lt--~~~v~~~~~~~~~~~------- 71 (405) +|+|.||..++-= -.|+.-|++.|+..|++|++.-+ +-++ .+..-.+|- |-+|+-......+++ T Consensus 42 Pl~G~rI~~clHl---e~kTA~L~~tL~~~GAeV~~~~~NplST---QDdvaAaL~~~Gi~VfA~~g~t~eey~~~~~~~ 115 (427) T PRK05476 42 PLKGARIAGCLHM---TIQTAVLIETLKALGAEVRWASCNPFST---QDHAAAALAAAGIPVFAWKGETLEEYWEAIERA 115 (427) T ss_pred CCCCCEEEEEEEE---CHHHHHHHHHHHHCCCEEEEECCCCCCC---CHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHH T ss_conf 9899889999830---0889999999998499899954798764---579999998689169997898999999999997 Q ss_pred --CCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC Q ss_conf --7743001144655788411188898852024552146667--522799689840566000003889999999864000 Q gi|254780622|r 72 --ESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGC 147 (405) Q Consensus 72 --~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~ 147 (405) .-||+-+-.=+|+..+.-.-..-+.+--.|.+.---|.+. .+-.+...+-+|+++.| +.+ + T Consensus 116 L~~~P~iiiDDG~Dl~~~lh~~~~~~~~~i~G~~EETTTGv~RL~am~~~g~L~~PviavN--Da~-t------------ 180 (427) T PRK05476 116 LDWGPNMILDDGGDLTLLVHTERPELLANIKGVTEETTTGVHRLYAMAKDGELKFPAINVN--DSV-T------------ 180 (427) T ss_pred HCCCCCEEEECCCHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHCCCCCCCEEEEC--CHH-H------------ T ss_conf 5559987875652289999986056675416303475263899999986697777779865--534-4------------ Q ss_pred CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHH Q ss_conf 13465212553103223334345589999999863101320017977898404201010213576215772788999999 Q gi|254780622|r 148 YFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKS 227 (405) Q Consensus 148 ~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~ 227 (405) +.+. =+.+|.| ...++.+.+.-+ ..+.||+|+|-+= |--|.-+|.. T Consensus 181 -------K~~F-DNrYGtG-----qS~~dgi~r~Tn----~llaGK~vVV~GY-----------------G~~GkG~A~~ 226 (427) T PRK05476 181 -------KSKF-DNRYGTG-----ESLLDGIKRATN----VLIAGKVVVVAGY-----------------GDVGKGSAQR 226 (427) T ss_pred -------HHHC-CCCCCCC-----CCHHHHHHHHHC----CEECCCEEEEECC-----------------CCCCCHHHHH T ss_conf -------2222-4553346-----249999998735----2125737999556-----------------6556008998 Q ss_pred HHHCCCCEEEEE Q ss_conf 982588389984 Q gi|254780622|r 228 LAYFGAEVILIS 239 (405) Q Consensus 228 ~~~~Ga~V~li~ 239 (405) +.-.||.|+..- T Consensus 227 arg~GA~ViVtE 238 (427) T PRK05476 227 LRGLGARVIVTE 238 (427) T ss_pred HHCCCCEEEEEE T ss_conf 741898799980 No 281 >PRK07578 short chain dehydrogenase; Provisional Probab=89.27 E-value=1.7 Score=22.91 Aligned_cols=63 Identities=22% Similarity=0.174 Sum_probs=34.5 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHH Q ss_conf 7278899999998258838998415667765674675465778999999850588879974044444322 Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFP 286 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~ 286 (405) |+=.|.++|+.+..+ ++|..+... ... ++ ..+...++..+.+.+.-+.|++|.+|.+..+.+- T Consensus 9 s~GIG~aia~~la~~-~~vv~~~r~-~~~----~~-~Dvtd~~~v~~~~~~~G~iD~lVnnAG~~~~~~~ 71 (199) T PRK07578 9 SGTIGRAVVAELSAR-HEVITAGRS-SGD----VQ-VDITDPASIRALFEKVGKVDAVVSAAGKVHFAPL 71 (199) T ss_pred CCHHHHHHHHHHHCC-CCEEEEECC-CCC----EE-EECCCHHHHHHHHHHHCCCCEEEECCCCCCCCCH T ss_conf 748999999999679-998998368-677----56-8588999999999962999899988722679894 No 282 >PRK06882 acetolactate synthase 3 catalytic subunit; Validated Probab=89.27 E-value=1.7 Score=22.91 Aligned_cols=147 Identities=19% Similarity=0.281 Sum_probs=87.8 Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEE--------CCEEEEECCCCCHHHH----HHHHHHHHCCCCE Q ss_conf 345589999999863101320017977898404201010--------2135762157727889----9999998258838 Q gi|254780622|r 168 MSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPL--------DPMRYIANRSSGQQGH----AIAKSLAYFGAEV 235 (405) Q Consensus 168 l~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~I--------D~VR~ItN~SSGk~G~----~iA~~~~~~Ga~V 235 (405) ...|..++..+.+.+ .+.-++++-+|+...+ .|-|+++..+.|-||+ +|.-.+......| T Consensus 371 ~i~p~~~~~~l~~~~--------~~d~ii~~D~G~~~~~~~~~~~~~~p~~~~~~~~~GsmG~glpaAiGA~lA~p~~~V 442 (574) T PRK06882 371 VIKPQQVVEAIYRLT--------NGDAYVASDVGQHQMFAALHYPFDKPRRWINSGGAGTMGFGLPAAIGVKFAHPEGTV 442 (574) T ss_pred CCCHHHHHHHHHHCC--------CCCEEEEECCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCE T ss_conf 668899999998417--------997499975881499998756667897231689874423223899999985899858 Q ss_pred EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH----HHHHHHHHHHHCCCCCCCCCCCCEEEEEECHH Q ss_conf 99841566776567467546577899999985058887997404----44443222210112334557751045521806 Q gi|254780622|r 236 ILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA----VSDWRFPKIAGTKIKRKDIGDTMRIDLMENPD 311 (405) Q Consensus 236 ~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA----VSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pd 311 (405) .+|.|-.+. --+.+|+..++...++.-++|+.=. +..|. .....++. ....+...|| T Consensus 443 v~i~GDG~f----------~m~~qEL~Tavr~~lpv~ivV~NN~~yg~i~~~q-~~~~~g~~--------~~~~~~~~pD 503 (574) T PRK06882 443 VCVTGDGSI----------QMNIQELSTAKQYDIPVVIVSLNNRFLGMVKQWQ-DLIYSGRH--------SQVYMNSLPD 503 (574) T ss_pred EEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH-HHHCCCCC--------CCCCCCCCCC T ss_conf 999882798----------6559999999996899589999798542999999-98608976--------7556789999 Q ss_pred HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH Q ss_conf 89887621489958999811412389999999997 Q gi|254780622|r 312 ILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLN 346 (405) Q Consensus 312 IL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~ 346 (405) .-+ +.+--. +-|+..++.+-++.|.++... T Consensus 504 f~~-lA~a~G----~~g~rV~~~~eL~~al~~Al~ 533 (574) T PRK06882 504 FAK-LAEAYG----HVGIQIDTPDELEEKLTQAFS 533 (574) T ss_pred HHH-HHHHCC----CEEEEECCHHHHHHHHHHHHH T ss_conf 999-999789----979997999999999999985 No 283 >PRK05884 short chain dehydrogenase; Provisional Probab=89.25 E-value=0.73 Score=25.34 Aligned_cols=16 Identities=25% Similarity=0.349 Sum_probs=8.6 Q ss_pred HHHHHHHHCCCEEEEE Q ss_conf 9999999879889998 Q gi|254780622|r 23 DLIRRLRERGAVVIPV 38 (405) Q Consensus 23 ~l~~~L~~~g~~V~vv 38 (405) .+++.|.+.|++|.++ T Consensus 15 aiA~~la~~Ga~V~i~ 30 (223) T PRK05884 15 TIAEGFRNDGHKVTLV 30 (223) T ss_pred HHHHHHHHCCCEEEEE T ss_conf 9999999879999999 No 284 >PRK06719 precorrin-2 dehydrogenase; Validated Probab=89.19 E-value=0.69 Score=25.50 Aligned_cols=36 Identities=31% Similarity=0.426 Sum_probs=24.7 Q ss_pred CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 9888556999952847899999999999987988999858 Q gi|254780622|r 1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT 40 (405) Q Consensus 1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T 40 (405) ++|+||+||+.=.|.+|+-|+. .|.+.|+.|.||-- T Consensus 9 l~l~~k~vLVvGGG~VA~rK~~----~Ll~~ga~VtVvsp 44 (157) T PRK06719 9 FNLHNKVVVIIGGGKIAYRKAS----GLKDTGAFVTVVSP 44 (157) T ss_pred EECCCCEEEEECCCHHHHHHHH----HHHHCCCEEEEECC T ss_conf 9759987999889899999999----99878796999999 No 285 >PRK00143 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Reviewed Probab=89.14 E-value=0.71 Score=25.42 Aligned_cols=33 Identities=30% Similarity=0.358 Sum_probs=23.8 Q ss_pred CCCCEEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEE Q ss_conf 885569999528478-9999999999998798899985 Q gi|254780622|r 3 LSGKKIALIMCGSVA-VYKSLDLIRRLRERGAVVIPVM 39 (405) Q Consensus 3 l~~k~IllgvtGsia-a~k~~~l~~~L~~~g~~V~vv~ 39 (405) -+.|||++|.||++- ++ -+-+|+++|++|.-+. T Consensus 2 ~sk~rV~VamSGGVDSsV----aA~LL~~~Gy~V~Gv~ 35 (355) T PRK00143 2 PSKKRVVVGMSGGVDSSV----AAALLKEQGYDVIGLF 35 (355) T ss_pred CCCCEEEEEECCCHHHHH----HHHHHHHCCCCEEEEE T ss_conf 988889999167899999----9999997799589999 No 286 >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen.dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process. Probab=88.92 E-value=0.71 Score=25.41 Aligned_cols=66 Identities=20% Similarity=0.323 Sum_probs=39.8 Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHH Q ss_conf 7727889999999825883899841566776567467546577899999985058887997404444 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSD 282 (405) Q Consensus 216 SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSD 282 (405) |+|.+|..|.+.+...|..+..+...+.++.-.......+...+.+.+ +.++..-|++|++||=-| T Consensus 7 a~GQlG~~L~~~l~~~g~~~~~~~~~~~~~~~~~~~~~Dl~dP~~l~~-~~r~~~Pd~vvntAAYT~ 72 (317) T TIGR01214 7 ANGQLGRELVQQLSKPGRVVVALTRSTRLKLAARWSQLDLTDPEALEE-LLRAIRPDAVVNTAAYTD 72 (317) T ss_pred CCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHH-HHHHHCCCEEEECCHHCC T ss_conf 875679999997078882786436877761133654406224688999-998528753762301101 No 287 >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] Probab=88.77 E-value=1.5 Score=23.37 Aligned_cols=74 Identities=23% Similarity=0.403 Sum_probs=40.0 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC-------CCCCCE-EE---EEHHHH Q ss_conf 1797789840420101021357621577278899999998258838998415667-------765674-67---546577 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI-------ADPPNV-MT---IHVERA 258 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~-------~~~~~~-~~---i~v~t~ 258 (405) +.|-.||||+|++ | -|.++|+.|...|-.|+ |+|.-.. ..|.-. .+ -.-.+- T Consensus 3 ~tgnTiLITGG~s---------------G-IGl~lak~f~elgN~VI-i~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~ 65 (245) T COG3967 3 TTGNTILITGGAS---------------G-IGLALAKRFLELGNTVI-ICGRNEERLAEAKAENPEIHTEVCDVADRDSR 65 (245) T ss_pred CCCCEEEEECCCC---------------H-HHHHHHHHHHHHCCEEE-EECCCHHHHHHHHHCCCCHHEEEECCCCHHHH T ss_conf 4476799937964---------------3-65999999998389799-96574999999986094131565132035669 Q ss_pred HHHHHHHHHCCC-CCEEEEEHHH Q ss_conf 899999985058-8879974044 Q gi|254780622|r 259 EDMLQEVLKALP-VDIAVMVSAV 280 (405) Q Consensus 259 ~em~~~~~~~~~-~D~~I~aAAV 280 (405) .||.+.+.+..| -+++|-+|-+ T Consensus 66 ~~lvewLkk~~P~lNvliNNAGI 88 (245) T COG3967 66 RELVEWLKKEYPNLNVLINNAGI 88 (245) T ss_pred HHHHHHHHHHCCCHHEEEECCCC T ss_conf 99999998629861134303000 No 288 >PRK07845 flavoprotein disulfide reductase; Reviewed Probab=88.54 E-value=0.29 Score=27.96 Aligned_cols=89 Identities=22% Similarity=0.304 Sum_probs=56.5 Q ss_pred HHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH--HHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEE Q ss_conf 99864000134652125531032233343455899999--998631013200179778984042010-----10213576 Q gi|254780622|r 140 EILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQ--ITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYI 212 (405) Q Consensus 140 ~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~--~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~I 212 (405) ..|++.|+.+ -.|.|++.++..+... +.-....+....+..++++|-.|.+-- ..|..|++ T Consensus 99 ~~l~~~gv~~------------i~G~a~f~d~~~~~~~~~V~v~~~~g~~~~i~a~~iIIATGs~P~~lp~~~~dg~~~~ 166 (467) T PRK07845 99 AQLERAGVRV------------IAGRGRLDDDTPGLGPHRVKVTTADGTEEELEADVVLIATGASPRILPTAEPDGERIL 166 (467) T ss_pred HHHHHCCCEE------------EEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECEEEECCCCCCCCCCCCCCCCCEEE T ss_conf 9987579689------------9738999206656778779999358975899929699958998777999788985178 Q ss_pred ECC---------------CCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 215---------------7727889999999825883899841 Q gi|254780622|r 213 ANR---------------SSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 213 tN~---------------SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) |+. -.|-.|.++|..+...|.+||+|.- T Consensus 167 ts~~~~~l~~~P~~l~ViGgG~ig~E~A~~~~~lG~~Vtlv~~ 209 (467) T PRK07845 167 TWRQLYDLDELPEHLIVVGSGVTGAEFASAYTELGVKVTLVSS 209 (467) T ss_pred EEHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEE T ss_conf 2055317100898699989879999999999973987999995 No 289 >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Probab=88.38 E-value=0.53 Score=26.21 Aligned_cols=37 Identities=35% Similarity=0.480 Sum_probs=27.3 Q ss_pred EEEEEEECH-HHHHHHHHHHHHHHHCCCEEEEEECHHH Q ss_conf 699995284-7899999999999987988999858568 Q gi|254780622|r 7 KIALIMCGS-VAVYKSLDLIRRLRERGAVVIPVMTKSA 43 (405) Q Consensus 7 ~IllgvtGs-iaa~k~~~l~~~L~~~g~~V~vv~T~~A 43 (405) ||++...|. --.+-+..++++|++.|++|..+-++.. T Consensus 1 ki~i~~GGTGGHi~Palala~~L~~~g~~V~~i~~~~g 38 (350) T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRG 38 (350) T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH T ss_conf 98999478589999999999999978798999987836 No 290 >PRK06965 acetolactate synthase 3 catalytic subunit; Validated Probab=88.26 E-value=2 Score=22.48 Aligned_cols=159 Identities=17% Similarity=0.171 Sum_probs=90.7 Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH--------EECCEEEEECCCCCHHHHHHH----HHHHHCC Q ss_conf 3343455899999998631013200179778984042010--------102135762157727889999----9998258 Q gi|254780622|r 165 VGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE--------PLDPMRYIANRSSGQQGHAIA----KSLAYFG 232 (405) Q Consensus 165 ~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E--------~ID~VR~ItN~SSGk~G~~iA----~~~~~~G 232 (405) ......|..++..+.+.+ ..-.++++-+|+.. .-.|-|||+..+-|-||+++. -.+.... T Consensus 384 ~~~~i~p~~~~~~l~~~~--------~~d~iv~~D~G~~~~~~~~~~~~~~p~~~i~~~~~G~mG~glpaAiGA~lA~p~ 455 (587) T PRK06965 384 ESEIIKPQYVVEKLWELT--------DGDAFVCSDVGQHQMWAAQFYRFNEPRRWINSGGLGTMGVGLPYAMGVKMAHPD 455 (587) T ss_pred CCCCCCHHHHHHHHHHHC--------CCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC T ss_conf 767658899999999608--------998089955871378998761456897403687675400056899999985899 Q ss_pred CCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH Q ss_conf 83899841566776567467546577899999985058887997404444432222101123345577510455218068 Q gi|254780622|r 233 AEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDI 312 (405) Q Consensus 233 a~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdI 312 (405) ..|.+|.|-.+. --|.+|+..++...++.-++|+.=. -|-..+.. ++.. -.+..-.-.+...||. T Consensus 456 r~Vv~i~GDGsf----------~mt~qEL~Ta~r~~lpi~iiV~NN~--~yg~ir~~-q~~~--~~~~~~~~~~~~~Pdf 520 (587) T PRK06965 456 DDVVCITGEGSI----------QMCIQELSTCLQYDTPVKIISLNNR--YLGMVRQW-QQIE--YSKRYSHSYMDALPDF 520 (587) T ss_pred CCEEEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECC--CHHHHHHH-HHHH--CCCCCCCCCCCCCCCH T ss_conf 958999884588----------7659999999996899289999587--23599999-9987--1897665577899899 Q ss_pred HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH-CCCCE Q ss_conf 9887621489958999811412389999999997-49989 Q gi|254780622|r 313 LKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLN-KGADF 351 (405) Q Consensus 313 L~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~-K~~D~ 351 (405) .+ +.+- .. +-|+..++.+-++.|.++..+ ++.=. T Consensus 521 ~~-lA~a--~G--~~g~~V~~~~eL~~al~~Al~~~~~p~ 555 (587) T PRK06965 521 VK-LAEA--YG--HVGMRIEKTSDVEPALKEALRLKDRTV 555 (587) T ss_pred HH-HHHH--CC--CEEEEECCHHHHHHHHHHHHHCCCCCE T ss_conf 99-9997--79--989997999999999999986489809 No 291 >COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] Probab=88.21 E-value=0.42 Score=26.87 Aligned_cols=68 Identities=24% Similarity=0.213 Sum_probs=48.1 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHC---CCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEE Q ss_conf 0322333434558999999986310---1320017977898404201010213576215772788999999982588389 Q gi|254780622|r 160 SNGYGVGRMSEPCDIIRQITWLLYK---SKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVI 236 (405) Q Consensus 160 c~~~G~grl~e~~~I~~~~~~~~~~---~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~ 236 (405) +|..+..+.|+..-+..+--+.+++ ....+++||+|+|-+ +|-.|..|+.++...|++|| T Consensus 140 TG~~~~P~iP~~~G~~~f~g~~~HS~~~~~~~~~~GKrV~VIG-----------------~GaSA~di~~~l~~~ga~vt 202 (443) T COG2072 140 TGHLSEPYIPDFAGLDEFKGRILHSADWPNPEDLRGKRVLVIG-----------------AGASAVDIAPELAEVGASVT 202 (443) T ss_pred CCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHCCCCEEEEEC-----------------CCCCHHHHHHHHHHCCCEEE T ss_conf 0578989788878866668634441016961342788799989-----------------87039999999973067178 Q ss_pred EEECCCCC Q ss_conf 98415667 Q gi|254780622|r 237 LISGPVSI 244 (405) Q Consensus 237 li~g~~~~ 244 (405) +....... T Consensus 203 ~~qRs~~~ 210 (443) T COG2072 203 LSQRSPPH 210 (443) T ss_pred EEECCCCC T ss_conf 98517975 No 292 >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] Probab=88.17 E-value=1 Score=24.32 Aligned_cols=38 Identities=21% Similarity=0.161 Sum_probs=13.7 Q ss_pred EEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHH Q ss_conf 99952847899999999999987988999858568630698999 Q gi|254780622|r 9 ALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIV 52 (405) Q Consensus 9 llgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l 52 (405) ++|.+|-. .-+|.+.|. .+.+|...- +....+..+..+ T Consensus 5 i~G~~GqL----G~~L~~~l~-~~~~v~a~~-~~~~Ditd~~~v 42 (281) T COG1091 5 ITGANGQL----GTELRRALP-GEFEVIATD-RAELDITDPDAV 42 (281) T ss_pred EECCCCHH----HHHHHHHHC-CCCEEEECC-CCCCCCCCHHHH T ss_conf 97698767----999999717-784399515-765555685899 No 293 >PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional Probab=87.90 E-value=1 Score=24.40 Aligned_cols=75 Identities=17% Similarity=0.240 Sum_probs=48.2 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC-----HHEECCEEEEECC---------------CCCHHHH Q ss_conf 2333434558999999986310132001797789840420-----1010213576215---------------7727889 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPT-----YEPLDPMRYIANR---------------SSGQQGH 222 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T-----~E~ID~VR~ItN~---------------SSGk~G~ 222 (405) .|.|++.++..+.-... .+....+..++++|..|.. ..++|..|+++.. -.|-.|. T Consensus 114 ~G~a~f~~~~~v~V~~~----dg~~~~i~a~~iIIATGs~p~~p~~~~~~~~~v~~sd~~l~l~~~Pk~vvIIGgG~ig~ 189 (465) T PRK05249 114 QGRASFVDPHTVEVECP----DGSVETLTAEKIVIATGSRPYRPDDVDFDHPRIYDSDSILSLDHLPRSLIIYGAGVIGC 189 (465) T ss_pred EEEEEECCCCCEEEECC----CCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCEEEEECCCCCHH T ss_conf 84789727984044348----99628998427999537524567878989872883678543300797599999982179 Q ss_pred HHHHHHHHCCCCEEEEECC Q ss_conf 9999998258838998415 Q gi|254780622|r 223 AIAKSLAYFGAEVILISGP 241 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~g~ 241 (405) ++|..+...|.+||+|+.. T Consensus 190 E~A~~~~~lG~~Vtiv~~~ 208 (465) T PRK05249 190 EYASIFRGLGVKVDLINTR 208 (465) T ss_pred HHHHHHHHHCCEEEEEECC T ss_conf 9999999609877897216 No 294 >KOG1208 consensus Probab=87.61 E-value=2.2 Score=22.23 Aligned_cols=21 Identities=38% Similarity=0.488 Sum_probs=12.8 Q ss_pred HHHHHHHHHHHHCCCCEEEEE Q ss_conf 788999999982588389984 Q gi|254780622|r 219 QQGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 219 k~G~~iA~~~~~~Ga~V~li~ 239 (405) -.|.+.|++++.+|+.|++.. T Consensus 46 GIG~eta~~La~~Ga~Vv~~~ 66 (314) T KOG1208 46 GIGFETARELALRGAHVVLAC 66 (314) T ss_pred CHHHHHHHHHHHCCCEEEEEE T ss_conf 437999999995799899984 No 295 >PRK10637 cysG siroheme synthase; Provisional Probab=87.28 E-value=2.3 Score=22.11 Aligned_cols=134 Identities=16% Similarity=0.164 Sum_probs=69.1 Q ss_pred CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 98885569999528478999999999999879889998585686306989999974797582076788778774300114 Q gi|254780622|r 1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLAN 80 (405) Q Consensus 1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~ 80 (405) ++|+||++|+.=.|-+|+-|... |.+.|+.|.|+-.+- ++. ++.+.....++... ..+... .| T Consensus 8 l~L~gk~vLVVGGG~vA~rK~~~----Ll~agA~VtViap~~-----~~~-l~~l~~~g~i~~~~---r~f~~~--dL-- 70 (457) T PRK10637 8 CQLRDRDCLIVGGGDVAERKARL----LLDAGARLTVNALAF-----IPQ-FTAWADAGMLTLVE---GPFDES--LL-- 70 (457) T ss_pred EECCCCEEEEECCCHHHHHHHHH----HHHCCCEEEEECCCC-----CHH-HHHHHHCCCEEEEE---CCCCHH--HH-- T ss_conf 87389869998998999999999----987898799989989-----989-99998669828996---789968--83-- Q ss_pred CCCEEEEEECCHHH-----HHHHH--CC----CCCCHHHHHHHH---CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHC Q ss_conf 46557884111888-----98852--02----455214666752---279968984056600000388999999986400 Q gi|254780622|r 81 ECDLLVVAPASANF-----IAHVA--HG----MVYDLASAILLA---KGDQPVLIAPAMNFMMWAKPATQRNVEILQKDG 146 (405) Q Consensus 81 ~aD~~iVaPaTaNt-----iaK~A--~G----iaD~llt~~~la---~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g 146 (405) .+.++|.-||-|. +++.| .| .+|++-.+.+.. ..+-|+.++=+-+. .+|+.-+.++.--+ T Consensus 71 -~g~~LViaATdd~~vn~~i~~~a~~~~ilVNvvD~p~lcdF~~PAiv~Rg~l~IAISTgG---~sP~LAr~lR~~lE-- 144 (457) T PRK10637 71 -DTCWLAIAATDDDAVNQRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSGG---TSPVLARLLREKLE-- 144 (457) T ss_pred -CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEECCCEEEEEECCC---CCHHHHHHHHHHHH-- T ss_conf -895199990699999999999999829868845882448744431573176389861589---87088999999998-- Q ss_pred CCCCCCCHHHHH Q ss_conf 013465212553 Q gi|254780622|r 147 CYFIGPESGAMA 158 (405) Q Consensus 147 ~~vi~P~~g~la 158 (405) ..+++..|.|+ T Consensus 145 -~~lP~~~g~la 155 (457) T PRK10637 145 -SLLPQHLGQVA 155 (457) T ss_pred -HHCCHHHHHHH T ss_conf -65572489999 No 296 >TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur. Probab=87.20 E-value=2.3 Score=22.08 Aligned_cols=60 Identities=22% Similarity=0.304 Sum_probs=28.2 Q ss_pred CEEEEECCCCCHHHHHHH----HHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEE Q ss_conf 135762157727889999----9998258838998415667765674675465778999999850588879974 Q gi|254780622|r 208 PMRYIANRSSGQQGHAIA----KSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMV 277 (405) Q Consensus 208 ~VR~ItN~SSGk~G~~iA----~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~a 277 (405) |-|++++.+.|-||+.+. -.+...+-.|.+|.|-.+. --+.+|+..++...++.-++|+. T Consensus 420 p~~~~~~~~~G~mG~glpaAiGA~lA~p~r~VV~i~GDG~f----------~m~~~EL~Ta~r~~lpi~~vV~N 483 (579) T TIGR03457 420 PRKFLAPMSFGNCGYAFPTIIGAKIAAPDRPVVAYAGDGAW----------GMSMNEIMTAVRHDIPVTAVVFR 483 (579) T ss_pred CCEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEE T ss_conf 87165057656654557999999984899828999883787----------25299999999978692899997 No 297 >PRK06154 hypothetical protein; Provisional Probab=87.17 E-value=2.4 Score=22.07 Aligned_cols=146 Identities=15% Similarity=0.147 Sum_probs=75.9 Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCEEEEE-ECCC--------HHEECCEEEEECCCCCHHHHHHHH----HHHHCCCCE Q ss_conf 455899999998631013200179778984-0420--------101021357621577278899999----998258838 Q gi|254780622|r 169 SEPCDIIRQITWLLYKSKELLLKGKRALVT-SGPT--------YEPLDPMRYIANRSSGQQGHAIAK----SLAYFGAEV 235 (405) Q Consensus 169 ~e~~~I~~~~~~~~~~~~~~~l~gk~vlIT-aG~T--------~E~ID~VR~ItN~SSGk~G~~iA~----~~~~~Ga~V 235 (405) ..|..++..+...+ ..+..+|+ -+|+ +..-.|-+|++..+.|-||+.+.- .+...+..| T Consensus 372 i~p~~~~~~l~~~~--------~p~d~iv~~D~G~~~~~~~~~~~~~~p~~~~~~g~~g~mG~glpaAiGa~lA~p~~~V 443 (556) T PRK06154 372 ISPYRVVWDLQIAW--------DDRDVIITHDAGSPRDQLSPFYRARRPGSYLGWGKTTQLGYGLGLAMGAKLARPDALV 443 (556) T ss_pred CCHHHHHHHHHHHC--------CCCCEEEEECCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCCE T ss_conf 49999999999963--------9998899926877699986553037888440479877445406999999973899938 Q ss_pred EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH-HHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHH Q ss_conf 99841566776567467546577899999985058887997404-44443222210112334557751045521806898 Q gi|254780622|r 236 ILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA-VSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILK 314 (405) Q Consensus 236 ~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA-VSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~ 314 (405) .+|.|-.+. --+.+|+..++...++.-++|+.=. -.-|. +. .+.... .....+ .++|.-+ T Consensus 444 v~i~GDGsf----------~m~~qEL~Ta~r~~lpv~viV~NN~~~g~~~--~~--~~~~~~----~~~~~~-~~~Df~~ 504 (556) T PRK06154 444 ANLLGDAAF----------GECGMDFETAVRNRIPTVTILLNNGCMGGYD--KH--MPLSTT----KYRTRF-LSGDYAM 504 (556) T ss_pred EEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCHHHHHH--HH--HHHHCC----CCCCCC-CCCCHHH T ss_conf 999873798----------8779999999994999789999680638999--88--675067----667875-8999999 Q ss_pred HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH Q ss_conf 87621489958999811412389999999997 Q gi|254780622|r 315 IIGHHQCRPSIVVGFAAETQCIEQNAREKLLN 346 (405) Q Consensus 315 ~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~ 346 (405) +.+--. +-|+..++.+-++.|.++..+ T Consensus 505 -lA~a~G----~~g~~V~~~~el~~Al~~A~~ 531 (556) T PRK06154 505 -IARALG----GYTERVEDPERLVPALRRAAR 531 (556) T ss_pred -HHHHCC----CEEEEECCHHHHHHHHHHHHH T ss_conf -999779----979997999999999999985 No 298 >cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways. Probab=86.95 E-value=2.4 Score=21.99 Aligned_cols=177 Identities=16% Similarity=0.135 Sum_probs=94.6 Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE Q ss_conf 68984056600000388999999986400013465212553103223334345589999999863101320017977898 Q gi|254780622|r 118 PVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALV 197 (405) Q Consensus 118 pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlI 197 (405) |.++-|--...-.+....+++++.|.+.|+.-+-+ ||-.|.+-....++-..-+...... .+|+ +-| T Consensus 6 ~~~~TPf~~dg~iD~~~l~~~v~~l~~~Gv~gi~v-------~GstGE~~~Ls~~Er~~l~~~~~~~-----~~~~-~~v 72 (284) T cd00950 6 TALVTPFKDDGSVDFDALERLIEFQIENGTDGLVV-------CGTTGESPTLSDEEHEAVIEAVVEA-----VNGR-VPV 72 (284) T ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CEECCCHHHCCHHHHHHHHHHHHHH-----CCCC-CEE T ss_conf 76666788786969999999999999769998996-------8435124248999999999999997-----1897-507 Q ss_pred EECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEE Q ss_conf 40420101021357621577278899999998258838998415667765674675465778999999850588879974 Q gi|254780622|r 198 TSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMV 277 (405) Q Consensus 198 TaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~a 277 (405) -+|-....+ +.-..+|+.+...||+-.++.-|.. .+ ..-+...+.++++.+..+..+++. T Consensus 73 i~gv~~~~t------------~~~i~~a~~A~~~Gadai~v~pP~y------~~-~s~~~l~~~~~~ia~a~~lPi~lY- 132 (284) T cd00950 73 IAGTGSNNT------------AEAIELTKRAEKAGADAALVVTPYY------NK-PSQEGLYAHFKAIAEATDLPVILY- 132 (284) T ss_pred EEECCCCCH------------HHHHHHHHHHHHCCCCEEEECCCCC------CC-CCHHHHHHHHHHHHHCCCCCEEEE- T ss_conf 750787789------------9999999999983999899626657------89-799999999999975559977987- Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 0444443222210112334557751045521806898876214899589998114123899999999974998999 Q gi|254780622|r 278 SAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIV 353 (405) Q Consensus 278 AAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IV 353 (405) -.+.. ++. . -+|+.+..|.++ | -++|+|--+.++... .+-+.+.+-++-| T Consensus 133 ------n~P~~--------tg~---~----l~~~~l~~L~~~--p--nv~giK~ss~d~~~~-~~~~~~~~~~~~v 182 (284) T cd00950 133 ------NVPGR--------TGV---N----IEPETVLRLAEH--P--NIVGIKEATGDLDRV-SELIALCPDDFAV 182 (284) T ss_pred ------ECCCC--------CCC---C----CCHHHHHHHHCC--C--CEEEEECCCCCHHHH-HHHHHHCCCCCEE T ss_conf ------37641--------167---8----888999998479--9--989998588989999-9999866987546 No 299 >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a Probab=86.90 E-value=2.4 Score=21.97 Aligned_cols=76 Identities=18% Similarity=0.268 Sum_probs=53.9 Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC Q ss_conf 45589999999863101320017977898404201010213576215772788999999982588389984156677656 Q gi|254780622|r 169 SEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPP 248 (405) Q Consensus 169 ~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~ 248 (405) .-|..|++-+.++ ..+++||+++|-+ .|.--|.-+|.-+..+||.||+.|..+. T Consensus 26 cTp~ai~~ll~~~-----~i~l~Gk~vvViG----------------rS~iVG~Pla~lL~~~~atVt~chs~T~----- 79 (168) T cd01080 26 CTPAGILELLKRY-----GIDLAGKKVVVVG----------------RSNIVGKPLAALLLNRNATVTVCHSKTK----- 79 (168) T ss_pred CCHHHHHHHHHHH-----CCCCCCCEEEEEC----------------CCCCCHHHHHHHHHHCCCEEEEECCCCC----- T ss_conf 8499999999994-----9887785699987----------------8730089999999848997999768988----- Q ss_pred CEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH Q ss_conf 746754657789999998505888799740444443 Q gi|254780622|r 249 NVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWR 284 (405) Q Consensus 249 ~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~ 284 (405) ++.+. ...+|++|.|+-+..|- T Consensus 80 -----------~l~~~---~~~ADIvIsA~G~~~li 101 (168) T cd01080 80 -----------NLKEH---TKQADIVIVAVGKPGLV 101 (168) T ss_pred -----------CHHHH---HHHCCEEEEECCCCCCC T ss_conf -----------97997---41045355415876637 No 300 >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase; InterPro: IPR011294 This entry represents a subfamily of the short chain dehydrogenases. Characterised members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polymers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.; GO: 0003858 3-hydroxybutyrate dehydrogenase activity. Probab=86.73 E-value=2.5 Score=21.92 Aligned_cols=69 Identities=13% Similarity=0.093 Sum_probs=37.5 Q ss_pred HHHHHHHHHHHHHH-HCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC Q ss_conf 03889999999864-0001346521255310322333434558999999986310132001797789840420 Q gi|254780622|r 131 AKPATQRNVEILQK-DGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPT 202 (405) Q Consensus 131 ~~p~~~~nl~~L~~-~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T 202 (405) .-|-|++++.-+.+ .|+-.=.=....+. ...=.+|+.++++|-+.+. +|.+...+-+.|..+.|-+|=| T Consensus 187 ~TPLV~~Qi~DqAk~rGi~eE~V~~~VmL--~~~P~k~F~~~~e~A~~a~-fLaS~~A~~~TG~~~~~DGGWt 256 (258) T TIGR01963 187 RTPLVEKQIADQAKTRGIPEEQVIREVML--KKQPTKRFVTVDEVAETAL-FLASDAAAGITGQAIVLDGGWT 256 (258) T ss_pred CCHHHHHHHHHHHHHCCCCHHHHHHHHCC--CCCCCCCCCCHHHHHHHHH-HHCCHHHHCCCCEEEEECCCEE T ss_conf 75546765899986518899888898607--8889841137999999999-8417344236620788648433 No 301 >PRK03170 dihydrodipicolinate synthase; Provisional Probab=86.57 E-value=2.5 Score=21.86 Aligned_cols=176 Identities=17% Similarity=0.111 Sum_probs=95.4 Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE Q ss_conf 98405660000038899999998640001346521255310322333434558999999986310132001797789840 Q gi|254780622|r 120 LIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTS 199 (405) Q Consensus 120 ~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITa 199 (405) ++-|--...-.+....+++++.|.+.|+.-+-+ ||-.|.+-....++-..-+...... .+| ++-|.+ T Consensus 9 ~~TPf~~dg~iD~~~l~~~v~~l~~~Gv~Gi~~-------~GstGE~~~Ls~~Er~~v~~~~~~~-----~~~-~~pvi~ 75 (292) T PRK03170 9 LVTPFKEDGSVDFAALRKLVDYQIANGTDGLVV-------VGTTGESPTLTHEEHEELIRAVVEA-----VNG-RVPVIA 75 (292) T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CEECCCCCCCCHHHHHHHHHHHHHH-----CCC-CCEEEE T ss_conf 567778896959999999999999779999996-------8324141128999999999999987-----389-712884 Q ss_pred CCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH Q ss_conf 42010102135762157727889999999825883899841566776567467546577899999985058887997404 Q gi|254780622|r 200 GPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA 279 (405) Q Consensus 200 G~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA 279 (405) |-+.. |=+.-..+|+++...||+-.++.-|. +.+ ..-+..-++++++.+..+..+++ T Consensus 76 gv~~~------------~t~~~i~~a~~A~~~Gadav~v~~P~------y~~-~s~~~l~~~f~~ia~~~~~Pi~l---- 132 (292) T PRK03170 76 GTGSN------------STAEAIELTKFAEKAGADGALVVTPY------YNK-PTQEGLYQHFKAIAEATDLPIIL---- 132 (292) T ss_pred CCCCC------------CHHHHHHHHHHHHHCCCCEEEECCCC------CCC-CCHHHHHHHHHHHHHCCCCCEEE---- T ss_conf 37876------------79999999998987599989961776------889-99999999999998635997698---- Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 444432222101123345577510455218068988762148995899981141238999999999749989999 Q gi|254780622|r 280 VSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVS 354 (405) Q Consensus 280 VSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVA 354 (405) |-.+.. ++ . .-+|+.+.+|.+ .| -++|+|--+.+... ..+-+...+-++-|. T Consensus 133 ---Yn~P~~--------tg-----~--~l~~~~l~~L~~--~~--nv~giKdss~d~~~-~~~~~~~~~~~~~v~ 184 (292) T PRK03170 133 ---YNVPGR--------TG-----V--DILPETVARLAE--HP--NIVGIKEATGDLER-VSELRELCPDDFAVY 184 (292) T ss_pred ---EECCCC--------CC-----C--CCCHHHHHHHHC--CC--CEEEEEECCCCHHH-HHHHHHHCCCCCEEE T ss_conf ---737863--------27-----6--769999999817--89--98999969999999-999998669873674 No 302 >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] Probab=86.54 E-value=0.83 Score=24.97 Aligned_cols=23 Identities=30% Similarity=0.374 Sum_probs=16.0 Q ss_pred HHHHHHHHHHCCCEEEEEECHHHH Q ss_conf 999999999879889998585686 Q gi|254780622|r 21 SLDLIRRLRERGAVVIPVMTKSAQ 44 (405) Q Consensus 21 ~~~l~~~L~~~g~~V~vv~T~~A~ 44 (405) .-.|+.+|.+.|++|.++ |+++. T Consensus 11 G~~L~~~L~~~gh~v~il-tR~~~ 33 (297) T COG1090 11 GRALTARLRKGGHQVTIL-TRRPP 33 (297) T ss_pred HHHHHHHHHHCCCEEEEE-ECCCC T ss_conf 689999998489869999-74785 No 303 >pfam03358 FMN_red NADPH-dependent FMN reductase. Probab=86.53 E-value=2 Score=22.53 Aligned_cols=84 Identities=21% Similarity=0.186 Sum_probs=41.5 Q ss_pred EEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCE Q ss_conf 78984042010102135762157727889999999825883899841566776567467546577899999985058887 Q gi|254780622|r 194 RALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDI 273 (405) Q Consensus 194 ~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~ 273 (405) ||++-.|..+ .+..|.++..++++.+...|++|.++.-. ....|...........+++.+-..+...+|. T Consensus 2 kil~i~GS~r---------~~s~t~~l~~~~~~~l~~~g~e~~~idl~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~aD~ 71 (147) T pfam03358 2 KILVISGSPR---------KGSNTRKLAEWAAELLEEAGAEVELIDLA-DLPLPLCDEDLEAGDPDDVQELREKIAAADG 71 (147) T ss_pred EEEEEECCCC---------CCCHHHHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC T ss_conf 7999976799---------88769999999999987769925996323-3467544664565898899999999995787 Q ss_pred EEEEHHHHHHHHHH Q ss_conf 99740444443222 Q gi|254780622|r 274 AVMVSAVSDWRFPK 287 (405) Q Consensus 274 ~I~aAAVSDf~~~~ 287 (405) +|+++-+--+.++- T Consensus 72 iV~~sP~y~~~~~~ 85 (147) T pfam03358 72 LIIVTPEYNGSVPG 85 (147) T ss_pred CEEECCCCCCCCCH T ss_conf 68806301036789 No 304 >PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed Probab=86.46 E-value=2.6 Score=21.82 Aligned_cols=158 Identities=16% Similarity=0.249 Sum_probs=89.8 Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHE-------ECCEEEEECCCCCHHHHHHHHH----HHHCCCCEEE Q ss_conf 4558999999986310132001797789840420101-------0213576215772788999999----9825883899 Q gi|254780622|r 169 SEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEP-------LDPMRYIANRSSGQQGHAIAKS----LAYFGAEVIL 237 (405) Q Consensus 169 ~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~-------ID~VR~ItN~SSGk~G~~iA~~----~~~~Ga~V~l 237 (405) ..|.+++..+.+.+ . .-++++-+|+... -.|-|||++..-|-||+.+.-+ +......|.+ T Consensus 387 i~p~~v~~~l~~~~--------p-d~iv~~D~G~~~~w~~~~l~~~p~~~i~s~g~GsmG~glPaAiGA~lA~p~r~Vv~ 457 (615) T PRK07418 387 IYPQEVLLAVRDLA--------P-DAYYTTDVGQHQMWAAQFLRNGPRRWISSAGLGTMGFGMPAAMGVKVALPDEQVIC 457 (615) T ss_pred CCHHHHHHHHHHHC--------C-CCEEEECCCCHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEE T ss_conf 19999999999758--------8-87799368621688998712278712158787632578899999998489996899 Q ss_pred EECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH----HHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHH Q ss_conf 841566776567467546577899999985058887997404----4444322221011233455775104552180689 Q gi|254780622|r 238 ISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA----VSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDIL 313 (405) Q Consensus 238 i~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA----VSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL 313 (405) |.|-.+. --+.+|+..++...++.-++|+.=. +.-|.- ...... .+..+ + ....||.- T Consensus 458 i~GDGsf----------~mt~qEL~Ta~r~~Lpv~ivV~NN~~~G~ir~~q~-~~~~~~---~~~~~---~-~~~~pDf~ 519 (615) T PRK07418 458 IAGDASF----------LMNIQELGTLAQYGIPVKTVIINNGWQGMVRQWQE-SFYDER---YSASN---M-LPGMPDFV 519 (615) T ss_pred EECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH-HHCCCC---CCCCC---C-CCCCCCHH T ss_conf 9844387----------66499999999968996899997984479999999-861887---67345---7-78999999 Q ss_pred HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCC Q ss_conf 887621489958999811412389999999997499899992057 Q gi|254780622|r 314 KIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCIL 358 (405) Q Consensus 314 ~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i~ 358 (405) +. .+--. +-|+..++.+-++.|.++....+-=.+|-=.++ T Consensus 520 ~l-A~a~G----~~g~rV~~~~eL~~Al~~Al~~~gP~lidV~vd 559 (615) T PRK07418 520 KL-AEAFG----VKGMLISERDQLKDAIAEALAHDGPVLIDVHVR 559 (615) T ss_pred HH-HHHCC----CEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEC T ss_conf 99-99779----979997999999999999980899789999988 No 305 >PRK12320 hypothetical protein; Provisional Probab=86.15 E-value=2.7 Score=21.72 Aligned_cols=37 Identities=11% Similarity=0.275 Sum_probs=22.3 Q ss_pred EEEECHHHHHHHHHHHHHHHHCCCEEEEEECH------HHHHHC Q ss_conf 99528478999999999999879889998585------686306 Q gi|254780622|r 10 LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK------SAQKFI 47 (405) Q Consensus 10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~------~A~~fi 47 (405) +.|||.--+. .-.+.++|.-+|++|.-|... ++-.|| T Consensus 3 i~VT~A~G~l-GR~la~rLla~GH~V~Giar~r~~s~~~~~dFV 45 (699) T PRK12320 3 ILVTDATGAV-GRSVTRQLIAAGHTVSGIAQHPHDALDPRVDYV 45 (699) T ss_pred EEEECCCHHH-HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEE T ss_conf 7883462156-778999998668724544047986667545554 No 306 >PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional Probab=85.88 E-value=0.59 Score=25.92 Aligned_cols=74 Identities=15% Similarity=0.284 Sum_probs=50.5 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH-----HEECCEE-EEECC---------------CCCHHH Q ss_conf 23334345589999999863101320017977898404201-----0102135-76215---------------772788 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTY-----EPLDPMR-YIANR---------------SSGQQG 221 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~-----E~ID~VR-~ItN~---------------SSGk~G 221 (405) .|.|++.++..+.-. ..+....+.+++++|-.|... +-++..+ ++++. -.|-.| T Consensus 96 ~G~a~f~~~~~v~V~-----~~~g~~~l~a~~ivIATGs~p~~p~ipg~~~~~~v~~s~~~~~l~~lP~~l~IiGgG~ig 170 (441) T PRK08010 96 DGQAEFINNHSLRVH-----RPDGNLEIHGEKIFINTGAQSVVPPIPGITTTPGVYDSTGLLNLKELPGHLGILGGGYIG 170 (441) T ss_pred EEEEEECCCCCEEEE-----CCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECHHHHHCCCCCCCEEEEECCCHHH T ss_conf 989998579823776-----489989998258999337765455568757875398507852521169679998985899 Q ss_pred HHHHHHHHHCCCCEEEEECC Q ss_conf 99999998258838998415 Q gi|254780622|r 222 HAIAKSLAYFGAEVILISGP 241 (405) Q Consensus 222 ~~iA~~~~~~Ga~V~li~g~ 241 (405) .++|..+...|.+||+|... T Consensus 171 ~E~A~~~~~lG~~Vtiie~~ 190 (441) T PRK08010 171 VEFASMFANFGSKVTILEAA 190 (441) T ss_pred HHHHHHHHHCCCEEEEEECC T ss_conf 99999999759878897046 No 307 >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). Probab=85.80 E-value=2.1 Score=22.44 Aligned_cols=32 Identities=16% Similarity=0.113 Sum_probs=21.9 Q ss_pred EEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH Q ss_conf 995284789999999999998798899985856 Q gi|254780622|r 10 LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~ 42 (405) |-|.....+. .-+|++.|.+.|++|.|+.... T Consensus 3 ~~~~~~~p~q-~r~LA~~La~rGHeV~Vit~~~ 34 (396) T cd03818 3 LFVHQNFPGQ-FRHLAPALAAQGHEVVFLTEPN 34 (396) T ss_pred EEECCCCCHH-HHHHHHHHHHCCCEEEEEECCC T ss_conf 9988998816-9999999997899899996899 No 308 >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Probab=85.70 E-value=0.89 Score=24.77 Aligned_cols=33 Identities=18% Similarity=0.171 Sum_probs=21.9 Q ss_pred CCCCEEEEEEEC--HHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 885569999528--478999999999999879889998585 Q gi|254780622|r 3 LSGKKIALIMCG--SVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 3 l~~k~IllgvtG--siaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) .+||||++.=-| +.| +++.|.+.|++|.+.=.+ T Consensus 10 ~~Gk~V~V~GlG~sG~a------~a~~L~~~G~~v~~~D~~ 44 (487) T PRK03369 10 TPGAPVLVAGAGVTGRA------VLAALTRFGARPTVCDDD 44 (487) T ss_pred CCCCEEEEEEECHHHHH------HHHHHHHCCCEEEEEECC T ss_conf 79898999915683899------999999786979999898 No 309 >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional Probab=85.39 E-value=2.9 Score=21.49 Aligned_cols=204 Identities=19% Similarity=0.194 Sum_probs=101.2 Q ss_pred CCCCCCEEEEEEECHHH-HHHHHHHHHHHHHC--CCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCC--CCC Q ss_conf 98885569999528478-99999999999987--98899985856863069899999747975820767887787--743 Q gi|254780622|r 1 MDLSGKKIALIMCGSVA-VYKSLDLIRRLRER--GAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYE--SNH 75 (405) Q Consensus 1 m~l~~k~IllgvtGsia-a~k~~~l~~~L~~~--g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~--~~H 75 (405) |+..-||||+.-.+++- .+-+.-+++.|+++ ++++.++..+... +.+.++|-+.+++....... ... T Consensus 1 m~~~~kkILIir~~~iGD~il~tP~i~~Lk~~~P~a~I~~l~~~~~~--------~ll~~~P~id~i~~~~~k~~~~~~~ 72 (352) T PRK10422 1 MDKPFRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTI--------PILSENPEINALYGIKNKKAGASEK 72 (352) T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHH--------HHHHCCCCCCEEEEECCCCCCHHHH T ss_conf 99899779997588604999999999999998899889999780479--------9983399962798866755445677 Q ss_pred C--------CC-CCCCCEEEEEECCHH--HHHHHHCC---CC---CCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH Q ss_conf 0--------01-144655788411188--89885202---45---52146667522799689840566000003889999 Q gi|254780622|r 76 I--------QL-ANECDLLVVAPASAN--FIAHVAHG---MV---YDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRN 138 (405) Q Consensus 76 i--------~l-~~~aD~~iVaPaTaN--tiaK~A~G---ia---D~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~n 138 (405) + .| .+..|+.+..+-+.. .+.+++.. +. +..-.......... ..|.- ....+.++ T Consensus 73 ~~~~~~l~~~Lr~~~yD~vi~l~~~~~~~~l~~~~~~~~~ig~~~~~~~~~~~~~~~~~---~~~~~-----~~h~v~~~ 144 (352) T PRK10422 73 IKNFFSLIKVLRANKYDLIVNLTDQWMVALLVRLLNARVKISQDYHHRQSAFWRKSFTH---LVPLQ-----GGHVVESN 144 (352) T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHCC---CCCCC-----CHHHHHHH T ss_conf 99999999998554887788667664999999983898586566652101455655314---68875-----41599999 Q ss_pred HHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCC Q ss_conf 99986400013465212553103223334345589999999863101320017977898404201010213576215772 Q gi|254780622|r 139 VEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSG 218 (405) Q Consensus 139 l~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSG 218 (405) +..|+..|..-..++ ..+.-+++-...+...+. ...+.++-|+|--|++.. -|.... T Consensus 145 l~ll~~l~~~~~~~~------------~~l~~~~~~~~~~~~~l~---~~~~~~~~ivi~pga~~~----~K~Wp~---- 201 (352) T PRK10422 145 LSVLTPLGLSSLVKE------------TTMSYRPESWKRMRRQLD---HLGVTQNYVVIQPTARQI----FKCWDN---- 201 (352) T ss_pred HHHHHHCCCCCCCCC------------CCCCCCHHHHHHHHHHHH---HCCCCCCEEEEECCCCCC----CCCCCH---- T ss_conf 999864699866755------------566788789999998767---448889879996789985----677999---- Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCC Q ss_conf 7889999999825883899841566 Q gi|254780622|r 219 QQGHAIAKSLAYFGAEVILISGPVS 243 (405) Q Consensus 219 k~G~~iA~~~~~~Ga~V~li~g~~~ 243 (405) ..=.++++.+..+|.+|.++-||.. T Consensus 202 e~~a~l~~~L~~~g~~vvl~ggp~~ 226 (352) T PRK10422 202 DKFSAVIDALQARGYEVVLTSGPAK 226 (352) T ss_pred HHHHHHHHHHHHCCCEEEEECCCCH T ss_conf 9999999999847991999728988 No 310 >PRK13748 putative mercuric reductase; Provisional Probab=85.39 E-value=1.7 Score=23.04 Aligned_cols=75 Identities=19% Similarity=0.334 Sum_probs=53.4 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEEECCC---------------CCHHHH Q ss_conf 233343455899999998631013200179778984042010-----102135762157---------------727889 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYIANRS---------------SGQQGH 222 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~ItN~S---------------SGk~G~ 222 (405) .|.||+.++..+.-... .+..+.+..++++|-.|..-- -+|..+|+||.. +|-.|. T Consensus 208 ~G~A~f~~~~tv~V~~~----dg~~~~i~a~~iIIATGS~P~~P~ipGl~~~~~lTSd~~l~l~~lP~~l~IIGgG~IG~ 283 (561) T PRK13748 208 HGEARFKDDQTLIVRLN----DGGERVVAFDRCLIATGASPAVPPIPGLKETPYWTSTEALASDTIPERLAVIGSSVVAL 283 (561) T ss_pred EEEEEEECCCEEEEEEC----CCCEEEEEECEEEECCCCCCCCCCCCCCCCCCEECCHHHHCCCCCCCEEEEECCCHHHH T ss_conf 84999953988999935----89648994186999478876678888767786277456407443887389989868999 Q ss_pred HHHHHHHHCCCCEEEEECC Q ss_conf 9999998258838998415 Q gi|254780622|r 223 AIAKSLAYFGAEVILISGP 241 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~g~ 241 (405) ++|..+...|.+||++.-+ T Consensus 284 E~A~~f~~lGs~VTiv~r~ 302 (561) T PRK13748 284 ELAQAFARLGSKVTILARS 302 (561) T ss_pred HHHHHHHHCCCEEEEEECC T ss_conf 9999998649848999657 No 311 >PRK08527 acetolactate synthase 3 catalytic subunit; Validated Probab=85.36 E-value=2.9 Score=21.48 Aligned_cols=158 Identities=18% Similarity=0.195 Sum_probs=90.2 Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHE--------ECCEEEEECCCCCHHHHHHH----HHHHHCCCC Q ss_conf 434558999999986310132001797789840420101--------02135762157727889999----999825883 Q gi|254780622|r 167 RMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEP--------LDPMRYIANRSSGQQGHAIA----KSLAYFGAE 234 (405) Q Consensus 167 rl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~--------ID~VR~ItN~SSGk~G~~iA----~~~~~~Ga~ 234 (405) ....|..++..+.+.+ ...-++++-+|+... -.|-||+++.+.|-||+.+. -.+...+-. T Consensus 364 ~~i~p~~~~~~l~~~l--------~~~~ii~~D~G~~~~~~~~~~~~~~p~~~~~~~~~G~mG~~lpaAiGa~lA~p~r~ 435 (560) T PRK08527 364 EVLKPQWVIERCAKLL--------GDDAIITTDVGQHQMWVAQFYPFNRPRQLATSGGLGTMGYGLPAALGAKLAVPEKV 435 (560) T ss_pred CCCCHHHHHHHHHHHC--------CCCCEEEECCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCC T ss_conf 7729899999999767--------99848995587226889873335788757547886677871389999887489996 Q ss_pred EEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH-HHCCC-CCCCCCCCCEEEEEECHHH Q ss_conf 899841566776567467546577899999985058887997404444432222-10112-3345577510455218068 Q gi|254780622|r 235 VILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKI-AGTKI-KRKDIGDTMRIDLMENPDI 312 (405) Q Consensus 235 V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~-~~~Ki-kk~s~~~~l~L~L~~~pdI 312 (405) |.+|.|-.+. --+.+|+..++...++.-++|+.=.- |-.... ..... ++... ..+..+||. T Consensus 436 vv~i~GDG~f----------~m~~~EL~Ta~r~~lpv~ivV~NN~~--~g~i~~~q~~~~~~~~~~-----~d~~~~pdf 498 (560) T PRK08527 436 VINFTGDGSI----------LMNIQELMTAVEYGIPVINIILNNNF--LGMVRQWQTFFYEERYSQ-----TDLSTQPDF 498 (560) T ss_pred EEEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECCC--CHHHHHHHHHHCCCCCCC-----CCCCCCCCH T ss_conf 8999781798----------66599999999968895899996995--189999999861888776-----788899899 Q ss_pred HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 988762148995899981141238999999999749989999 Q gi|254780622|r 313 LKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVS 354 (405) Q Consensus 313 L~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVA 354 (405) .+ +.+- .. +-|+..+|.+-++.|.++..+.+.=.+|- T Consensus 499 ~~-~A~a--~G--~~g~~V~~~~el~~Al~~a~~~~~p~lIe 535 (560) T PRK08527 499 VK-LAEG--FG--GIGFRVTTKEEFDKALKQALKSDKVSLID 535 (560) T ss_pred HH-HHHH--CC--CEEEEECCHHHHHHHHHHHHHCCCCEEEE T ss_conf 99-9997--89--98999699999999999998189939999 No 312 >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Probab=85.18 E-value=2 Score=22.50 Aligned_cols=35 Identities=34% Similarity=0.436 Sum_probs=27.3 Q ss_pred EEEEEEE--CHHHHHHHHHHHHHHHHCCCEEEEEECHH Q ss_conf 6999952--84789999999999998798899985856 Q gi|254780622|r 7 KIALIMC--GSVAVYKSLDLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 7 ~Illgvt--Gsiaa~k~~~l~~~L~~~g~~V~vv~T~~ 42 (405) |||..++ ||+.-| ..+|++.|.+.|++|.++.... T Consensus 1 kil~i~~~~GG~e~~-~~~La~~L~~~Gh~V~vit~~~ 37 (359) T cd03808 1 KILHIVTVDGGLYSF-RLPLIKALRAAGYEVHVVAPPG 37 (359) T ss_pred CEEEEECCCCHHHHH-HHHHHHHHHHCCCEEEEEEECC T ss_conf 989997587659999-9999999997699999997079 No 313 >PRK08655 prephenate dehydrogenase; Provisional Probab=85.17 E-value=1 Score=24.45 Aligned_cols=78 Identities=22% Similarity=0.251 Sum_probs=42.4 Q ss_pred EEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE Q ss_conf 99952847899999999999987988999858568630698999997479758207678877877430011446557884 Q gi|254780622|r 9 ALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECDLLVVA 88 (405) Q Consensus 9 llgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD~~iVa 88 (405) ++|=+|... --+++.|++.|++|.+ .+++-.+ ....+..-|-... ..-.++..|+|+++|+ T Consensus 5 IIGG~G~MG----~~Fa~~f~~sGyeV~I-~gRd~~k---~~~va~~LGv~~~-----------~~~~e~~~~advVIvs 65 (441) T PRK08655 5 IIGGTGGLG----KWFARFLKDKGYEVIV-WGRDPKK---GKEVAKELGVEYA-----------SDNIDAAKDGDIVIVS 65 (441) T ss_pred EEECCCHHH----HHHHHHHHHCCCEEEE-EECCCCH---HHHHHHHHCCCCC-----------CCHHHHHHCCCEEEEE T ss_conf 994798177----9999999867988999-8157313---5678887386222-----------4478897249999998 Q ss_pred -E--CCHHHHHHHHCCCCCC Q ss_conf -1--1188898852024552 Q gi|254780622|r 89 -P--ASANFIAHVAHGMVYD 105 (405) Q Consensus 89 -P--aTaNtiaK~A~GiaD~ 105 (405) | +|..++.++|--...+ T Consensus 66 VPI~~T~~VI~~laP~l~~~ 85 (441) T PRK08655 66 VPINVTEDVIREVAPHVKEG 85 (441) T ss_pred CCHHHHHHHHHHHHCCCCCC T ss_conf 48899999999974248999 No 314 >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Probab=85.15 E-value=0.89 Score=24.79 Aligned_cols=41 Identities=20% Similarity=0.225 Sum_probs=30.1 Q ss_pred EEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEECHHHHHHC Q ss_conf 69999528478-999999999999879889998585686306 Q gi|254780622|r 7 KIALIMCGSVA-VYKSLDLIRRLRERGAVVIPVMTKSAQKFI 47 (405) Q Consensus 7 ~IllgvtGsia-a~k~~~l~~~L~~~g~~V~vv~T~~A~~fi 47 (405) |||+...|+-- .+-...|+++|+++|++|.++-++....++ T Consensus 2 ril~~~~~~~GH~~P~l~lA~~L~~rGh~Vt~~~~~~~~~~i 43 (401) T cd03784 2 RVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLV 43 (401) T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH T ss_conf 799987985758999999999999889959999387888899 No 315 >KOG1014 consensus Probab=85.14 E-value=2.4 Score=22.05 Aligned_cols=99 Identities=21% Similarity=0.296 Sum_probs=61.8 Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCC--------CCCCCC--EE--EEEHHHHHHHHHHHHHCC---CCCEEEEEHHH Q ss_conf 7727889999999825883899841566--------776567--46--754657789999998505---88879974044 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFGAEVILISGPVS--------IADPPN--VM--TIHVERAEDMLQEVLKAL---PVDIAVMVSAV 280 (405) Q Consensus 216 SSGk~G~~iA~~~~~~Ga~V~li~g~~~--------~~~~~~--~~--~i~v~t~~em~~~~~~~~---~~D~~I~aAAV 280 (405) +|..-|.+.|+++++||.+|.||+-.-+ +..-.. ++ .+++...++-++++++.+ +..++|=++.. T Consensus 57 aTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgILVNNvG~ 136 (312) T KOG1014 57 ATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGILVNNVGM 136 (312) T ss_pred CCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCC T ss_conf 88852299999999759879999688899999999998875807999998648981568999988627864899965531 Q ss_pred HHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH Q ss_conf 444322221011233455775104552180689887 Q gi|254780622|r 281 SDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII 316 (405) Q Consensus 281 SDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i 316 (405) +-..|... .|++..+..+.+++...+...+-+.+ T Consensus 137 ~~~~P~~f--~~~~~~~~~~ii~vN~~~~~~~t~~i 170 (312) T KOG1014 137 SYDYPESF--LKYPEGELQNIINVNILSVTLLTQLI 170 (312) T ss_pred CCCCCHHH--HHCCHHHHHHEEEEECCHHHHHHHHH T ss_conf 67883778--73855645314677432689999885 No 316 >PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional Probab=84.95 E-value=2 Score=22.46 Aligned_cols=72 Identities=17% Similarity=0.160 Sum_probs=39.6 Q ss_pred CCCCCEEE-EEEECH-HHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 88855699-995284-7899999999999987988999858568630698999997479758207678877877430011 Q gi|254780622|r 2 DLSGKKIA-LIMCGS-VAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLA 79 (405) Q Consensus 2 ~l~~k~Il-lgvtGs-iaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~ 79 (405) +-+-|||. +|++|+ +++ |++.|.+.|++|. .|+......+. .|+.+ |-+++. + ...+. - T Consensus 5 ~~~~k~ih~iGigG~Gmsa-----lA~~l~~~G~~V~--gsD~~~~~~~~-~L~~~-Gi~v~~---g----~~~~~---l 65 (459) T PRK00421 5 PRRIKRIHFVGIGGIGMSG-----LAEVLLNLGYKVS--GSDLKESAVTQ-RLLEL-GAIIFI---G----HDAEN---I 65 (459) T ss_pred CCCCCEEEEEEECHHHHHH-----HHHHHHHCCCEEE--EECCCCCHHHH-HHHHC-CCEEEC---C----CCHHH---C T ss_conf 6567889999866888999-----9999996899399--98898997899-99978-799977---9----89798---7 Q ss_pred CCCCEEEEEECCH Q ss_conf 4465578841118 Q gi|254780622|r 80 NECDLLVVAPASA 92 (405) Q Consensus 80 ~~aD~~iVaPaTa 92 (405) ..+|++|+-|+-. T Consensus 66 ~~~d~vV~Sp~I~ 78 (459) T PRK00421 66 KGADVVVVSSAIK 78 (459) T ss_pred CCCCEEEECCCCC T ss_conf 9999999899859 No 317 >TIGR03452 mycothione_red mycothione reductase. Mycothiol, a glutathione analog in Mycobacterium tuberculosis and related species, can form a disulfide-linked dimer called mycothione. This enzyme can reduce mycothione to regenerate two mycothiol molecules. The enzyme shows some sequence similarity to glutathione-disulfide reductase, trypanothione-disulfide reductase, and dihydrolipoamide dehydrogenase. The characterized protein from M. tuberculosis, a homodimer, has FAD as a cofactor, one per monomer, and uses NADPH as a substrate. Probab=84.89 E-value=2 Score=22.52 Aligned_cols=74 Identities=16% Similarity=0.249 Sum_probs=53.5 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-----EECCEEEEECCC---------------CCHHH Q ss_conf 2233343455899999998631013200179778984042010-----102135762157---------------72788 Q gi|254780622|r 162 GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-----PLDPMRYIANRS---------------SGQQG 221 (405) Q Consensus 162 ~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-----~ID~VR~ItN~S---------------SGk~G 221 (405) -.|.|++.++..+.. . ....+..++++|-.|..-- .+|.++|+||.. .|--| T Consensus 110 ~~G~a~f~~~~tv~v------~--~g~~~~a~~iiIATGs~P~~p~~~~~~~~~~~ts~~~l~l~~lP~~l~IiGgG~Ig 181 (452) T TIGR03452 110 YDGHARFVGPRTLRT------G--DGEEITGDQIVIAAGSRPYIPPAIADSGVRYHTNEDIMRLPELPESLVIVGGGYIA 181 (452) T ss_pred EEEEEEECCCCEEEC------C--CCCEEEECEEEECCCCCCCCCCCCCCCCCEEECCHHHHCCHHCCCEEEEECCCHHH T ss_conf 998999937857981------8--98789846699937998878887677898686556554330058669998886899 Q ss_pred HHHHHHHHHCCCCEEEEECCCC Q ss_conf 9999999825883899841566 Q gi|254780622|r 222 HAIAKSLAYFGAEVILISGPVS 243 (405) Q Consensus 222 ~~iA~~~~~~Ga~V~li~g~~~ 243 (405) .++|..+...|.+||+|...-. T Consensus 182 ~E~A~~~~~lG~~Vtlie~~~~ 203 (452) T TIGR03452 182 AEFAHVFSALGTRVTIVNRSTK 203 (452) T ss_pred HHHHHHHHHCCCEEEEEEECCC T ss_conf 9999999961994999996762 No 318 >PRK07168 bifunctional uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase; Reviewed Probab=84.78 E-value=3.1 Score=21.31 Aligned_cols=218 Identities=18% Similarity=0.201 Sum_probs=97.3 Q ss_pred CCCCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCC-----CCC---CCCCCCCCCC Q ss_conf 88556999952847899-99999999998798899985856863069899999747975-----820---7678877877 Q gi|254780622|r 3 LSGKKIALIMCGSVAVY-KSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRV-----YTH---LLSYKEGYES 73 (405) Q Consensus 3 l~~k~IllgvtGsiaa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v-----~~~---~~~~~~~~~~ 73 (405) .+||+|+=-.+|--..+ +..+=+..|.++|.++.+|.==+|- .+-....|-|+ -.. .++....... T Consensus 78 ~~Gk~VVRLKgGDP~VFGRggEE~~aL~~aGI~fEVVPGVTSa-----~AapAyAGIPLThR~~a~sv~vvTGh~~~~~~ 152 (474) T PRK07168 78 KEGKIVVRLKGGDPSIFGRVGEEAETLAAANIPYEIVPGITSS-----IAASSYAGIPLTHRNYSNSVTLLTGHAKGPLT 152 (474) T ss_pred HCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHH-----HHHHHHCCCCCCCCCCCCEEEEEECCCCCCCC T ss_conf 7799299973789853013599999999879967996796578-----89999759976668856439999603789976 Q ss_pred CCCCC--CCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEC---CCCCHHHHHHHHHHHHHHHHHHCCC Q ss_conf 43001--144655788411188898852024552146667522799689840---5660000038899999998640001 Q gi|254780622|r 74 NHIQL--ANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAP---AMNFMMWAKPATQRNVEILQKDGCY 148 (405) Q Consensus 74 ~Hi~l--~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaP---aMn~~M~~~p~~~~nl~~L~~~g~~ 148 (405) .+... ....+-+++ -+....+..++..+-+. =+ ....|+.+.= --++..+. .|.+++....+. .. T Consensus 153 d~~~~~~~~~~~TLV~-~MGv~~L~~I~~~Li~~-----G~-~~dTPVAVV~~GTt~~Qrtv~--gTL~~Ia~~v~~-~~ 222 (474) T PRK07168 153 DHGKYNSSHNSDTIAY-YMGIKNLPTICKNLRQA-----GK-KEDTPVAVIEWGTTGKQRVVT--GTLSTIVSIVKN-EN 222 (474) T ss_pred CHHHHHHHCCCCCEEE-EECHHHHHHHHHHHHHC-----CC-CCCCCEEEEECCCCCCCEEEE--EEHHHHHHHHHH-CC T ss_conf 5344997177994899-91464699999999966-----99-999828999768975728999--999999999997-37 Q ss_pred CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHH Q ss_conf 34652125531032233343455899999998631013200179778984042010102135762157727889999999 Q gi|254780622|r 149 FIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSL 228 (405) Q Consensus 149 vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~ 228 (405) +-.|.. .=.|.-..-.+ ...|. ...+|-|++||||- +-.+...+++.+ T Consensus 223 i~~PAv--------IVVGeVV~lR~---~L~Wf----E~kPLfG~rVLVtR-----------------treQA~~ls~~L 270 (474) T PRK07168 223 ISNPSM--------TIVGDVVSLRN---QIAWK----ERKPLHGKKVLFTS-----------------ATNKTSVMKQKL 270 (474) T ss_pred CCCCEE--------EEECCCCCCCC---CCCCC----CCCCCCCCEEEECC-----------------CHHHHHHHHHHH T ss_conf 899829--------99884005555---36753----56887886799778-----------------667769999999 Q ss_pred HHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH Q ss_conf 825883899841566776567467546577899999985058887997404 Q gi|254780622|r 229 AYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA 279 (405) Q Consensus 229 ~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA 279 (405) ...||+|.-+-. + +.+...++.+++.+...||.+|++.+ T Consensus 271 ~~~GA~v~E~Pt---I---------~~~~~~~~~~~i~~l~~ydwlvFTS~ 309 (474) T PRK07168 271 QEAGAEIYQIPT---F---------KKEEYTLTLEQINEIFNVDRLVFCSA 309 (474) T ss_pred HHCCCCEEEECC---C---------CCCCCCHHHHHHHHHCCCCEEEEECH T ss_conf 976993899445---3---------16885637999875333898999387 No 319 >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated Probab=84.70 E-value=1.3 Score=23.68 Aligned_cols=32 Identities=16% Similarity=0.079 Sum_probs=19.3 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 569999528478999999999999879889998585 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) +||.+.=+|.+-+ .++-.+-++|++|.++=.. T Consensus 3 ~~VaViGaG~mG~----giA~~~a~~G~~V~l~D~~ 34 (308) T PRK06129 3 GSIAIVGAGLIGR----AWAIVFARAGHRVRLWDAD 34 (308) T ss_pred CEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC T ss_conf 8799977789999----9999998589938999898 No 320 >pfam03807 F420_oxidored NADP oxidoreductase coenzyme F420-dependent. Probab=84.54 E-value=0.49 Score=26.47 Aligned_cols=26 Identities=38% Similarity=0.598 Sum_probs=22.1 Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 77278899999998258838998415 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFGAEVILISGP 241 (405) Q Consensus 216 SSGk~G~~iA~~~~~~Ga~V~li~g~ 241 (405) -+|.||.+|+..+.+.|+++.++..+ T Consensus 6 G~G~mg~ai~~~l~~~g~~~~~~~~r 31 (93) T pfam03807 6 GAGNMGEALARGLAAAGHEVIIANSR 31 (93) T ss_pred CCHHHHHHHHHHHHHCCCCCEEEECC T ss_conf 70099999999999779961278648 No 321 >pfam05221 AdoHcyase S-adenosyl-L-homocysteine hydrolase. Probab=84.49 E-value=3.2 Score=21.23 Aligned_cols=182 Identities=22% Similarity=0.221 Sum_probs=92.5 Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH-HHHHHCCHHHHHHH--HCCCCCCCC-------------- Q ss_conf 8885569999528478999999999999879889998585-68630698999997--479758207-------------- Q gi|254780622|r 2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK-SAQKFITPLIVGAI--SNRRVYTHL-------------- 64 (405) Q Consensus 2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~-~A~~fi~~~~l~~l--t~~~v~~~~-------------- 64 (405) +|+|.||..++-= --|+.-|++.|+..|++|...-+. -++ .+..-++| .|-+|+-.. T Consensus 40 Pl~G~rI~~~lHl---e~kTA~L~~tL~~~GA~V~~~~~NplST---QDdvaAaL~~~Gi~VfA~~g~t~eey~~~~~~~ 113 (430) T pfam05221 40 PLKGARIAGCLHM---TVQTAVLIETLVALGAEVRWASCNIFST---QDHAAAAIAAAGVPVFAWKGETLEEYWWCIERA 113 (430) T ss_pred CCCCCEEEEEEEC---HHHHHHHHHHHHHCCCEEEEECCCCCCC---CHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH T ss_conf 9999889999831---7999999999998598799965897532---379999999679769993799989999999998 Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHH Q ss_conf 67887787743001144655788411188898852024552146667--5227996898405660000038899999998 Q gi|254780622|r 65 LSYKEGYESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEIL 142 (405) Q Consensus 65 ~~~~~~~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L 142 (405) .+|.. ...|||-+-.=+|+..+.-....-+.+--.|.+.---|.+. .+-.+.-.+-+|+|+.| +. .++. T Consensus 114 L~~~~-~~~P~iiiDDG~Dl~~~~h~~~~~l~~~i~G~~EETTTGv~RL~am~~~g~L~fPviaVN--Da-~tK~----- 184 (430) T pfam05221 114 LTFKD-GQGPNMILDDGGDATLLIHKKYPQYLAGIRGVSEETTTGVHRLYKMLKKGKLLFPAINVN--DS-VTKS----- 184 (430) T ss_pred HCCCC-CCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEC--CH-HHHH----- T ss_conf 46588-989656542541252207856288886516715321478998788986596064179967--66-6513----- Q ss_pred HHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHH Q ss_conf 64000134652125531032233343455899999998631013200179778984042010102135762157727889 Q gi|254780622|r 143 QKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGH 222 (405) Q Consensus 143 ~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~ 222 (405) +. =+.+|.| ...++.+.+.- ...+.||+|+|-+= |--|. T Consensus 185 --------------~F-DNrYGtg-----qS~~dgi~r~T----n~liaGK~vVV~GY-----------------G~cGk 223 (430) T pfam05221 185 --------------KF-DNLYGCR-----ESLPDGIKRAT----DVMIAGKVAVVCGY-----------------GDVGK 223 (430) T ss_pred --------------HH-CCCCCCH-----HHHHHHHHHHH----CCEECCCEEEEECC-----------------CCCCH T ss_conf --------------40-1343312-----30999999861----71342767999556-----------------75357 Q ss_pred HHHHHHHHCCCCEEEEE Q ss_conf 99999982588389984 Q gi|254780622|r 223 AIAKSLAYFGAEVILIS 239 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~ 239 (405) -+|..+.-.||.|++.- T Consensus 224 G~A~r~rglGA~V~VtE 240 (430) T pfam05221 224 GCAASLRGQGARVIVTE 240 (430) T ss_pred HHHHHHHHCCCEEEEEC T ss_conf 89999842798899954 No 322 >PRK05976 dihydrolipoamide dehydrogenase; Validated Probab=84.16 E-value=1.8 Score=22.85 Aligned_cols=73 Identities=19% Similarity=0.307 Sum_probs=45.5 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEE-----CCEEEEECC---------------CCCHHHH Q ss_conf 23334345589999999863101320017977898404201010-----213576215---------------7727889 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPL-----DPMRYIANR---------------SSGQQGH 222 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~I-----D~VR~ItN~---------------SSGk~G~ 222 (405) .|.|++.++..+.-.. ..+....+..++++|-.|..--.+ | -+++|+. -.|-.|. T Consensus 114 ~G~a~f~~~~~v~V~~----~~g~~~~i~a~~iIIATGs~P~~lp~~~~~-~~~~ts~~~~~l~~~Pk~v~ViGgG~ig~ 188 (464) T PRK05976 114 HGIGRILDGKTVSVET----ATGENEMIIPENLLIATGSRPVELPGLPFG-GEVISSTEALSLETLPKSLVVVGGGYIGL 188 (464) T ss_pred EEEEEECCCCCEEEEC----CCCCCEEEEECEEEECCCCCCCCCCCCCCC-CCEECCHHHHCCCCCCCEEEEECCCHHHH T ss_conf 7268865898114442----788736998266998768886169976577-66782046317354895599989968999 Q ss_pred HHHHHHHHCCCCEEEEEC Q ss_conf 999999825883899841 Q gi|254780622|r 223 AIAKSLAYFGAEVILISG 240 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~g 240 (405) ++|..+.+.|.+||+|.- T Consensus 189 E~A~~~~~lG~~Vtii~~ 206 (464) T PRK05976 189 EWGSMLRKFGVEVTVVEA 206 (464) T ss_pred HHHHHHHHCCCEEEEEEE T ss_conf 999999953986999985 No 323 >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Probab=83.71 E-value=3.4 Score=21.02 Aligned_cols=74 Identities=23% Similarity=0.246 Sum_probs=39.0 Q ss_pred CCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 8855699-995284789999999999998798899985856863069899999747975820767887787743001144 Q gi|254780622|r 3 LSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANE 81 (405) Q Consensus 3 l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~ 81 (405) |+||||+ +|...|- .-+++.|.+.|++|.+.=.....++ ....+.+....+.... +... .++ -.. T Consensus 12 l~~kkv~i~GlG~sG-----~a~a~~L~~~g~~v~~~D~~~~~~~--~~~~~~l~~~gi~~~~-g~~~---~~~---~~~ 77 (458) T PRK01710 12 IKNKKVAVVGIGVSN-----IPLIKFLVKLGAKVTAFDKKSEEEL--GEISLELKEKGVNLEL-GENY---LDK---LTG 77 (458) T ss_pred HCCCEEEEEEECHHH-----HHHHHHHHHCCCEEEEEECCCCHHH--HHHHHHHHHCCCEEEE-CCCH---HHH---CCC T ss_conf 789969999787889-----9999999978897999989884314--8999999857998995-7840---542---378 Q ss_pred CCEEEEEEC Q ss_conf 655788411 Q gi|254780622|r 82 CDLLVVAPA 90 (405) Q Consensus 82 aD~~iVaPa 90 (405) +|++|+.|. T Consensus 78 ~d~vv~SPg 86 (458) T PRK01710 78 FDVIFKTPS 86 (458) T ss_pred CCEEEECCC T ss_conf 888998998 No 324 >TIGR01983 UbiG ubiquinone biosynthesis O-methyltransferase; InterPro: IPR010233 This entry represents an O-methyltransferase, which is believed to act at two points in the ubiquinone biosynthetic pathway in bacteria (UbiG) and mitochondria (COQ3) , . A separate methylase (MenG/UbiE) catalyses the single C-methylation step. The most commonly used names for genes in this family do not indicate whether this gene is an O-methyl, or C-methyl transferase.; GO: 0008425 2-polyprenyl-6-methoxy-14-benzoquinone methyltransferase activity, 0006744 ubiquinone biosynthetic process. Probab=83.56 E-value=1.3 Score=23.77 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=20.0 Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECC Q ss_conf 333434558999999986310132001797789840420101021 Q gi|254780622|r 164 GVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDP 208 (405) Q Consensus 164 G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~ 208 (405) -..|+..|++|...+..- .+=.|.+|.=+.|=++.||-. T Consensus 224 ~~~KFi~P~EL~~~l~d~------N~~~~l~~~~~~G~~YnP~~~ 262 (275) T TIGR01983 224 DWEKFIKPSELTSWLEDD------NRSAGLRVKDVKGLVYNPIKN 262 (275) T ss_pred CCCCCCCHHHHHHHHHHC------CCCCCEEEEEECCEEEEECCC T ss_conf 710153879999998512------646764899750507630138 No 325 >COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Probab=83.40 E-value=2.3 Score=22.09 Aligned_cols=36 Identities=31% Similarity=0.317 Sum_probs=24.7 Q ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH Q ss_conf 855699995284789999999999998798899985856 Q gi|254780622|r 4 SGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 4 ~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~ 42 (405) +.+||+++.||++-- ---+-.|+++|++|.-+.=+. T Consensus 2 ~~~kV~v~mSGGVDS---SVaA~lLk~QGyeViGl~m~~ 37 (356) T COG0482 2 KKKKVLVGMSGGVDS---SVAAYLLKEQGYEVIGLFMKN 37 (356) T ss_pred CCCEEEEECCCCHHH---HHHHHHHHHCCCEEEEEEEEE T ss_conf 876799990577789---999999997697499999996 No 326 >cd03132 GATase1_catalase Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases. Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases. Catalase catalyzes the dismutation of hydrogen peroxide (H2O2) to water and oxygen. This group includes the large catalases: Neurospora crassa Catalase-1 and Catalase-3 and, Escherichia coli HP-II. This GATase1-like domain has an essential role in HP-II catalase activity. However, it lacks enzymatic activity and the catalytic triad typical of GATase1 domains. Catalase-1 and -3 are homotetrameric, HP-II is homohexameric. It has been proposed that this domain may facilitate the folding and oligomerization process. The interface between this GATase1-like domain of HP-II and the core of the subunit forms part of a channel which provides access to the deeply buried catalase active sites of HPII. Catalase-1 is associated with non-growing cells; C Probab=83.32 E-value=3.3 Score=21.09 Aligned_cols=102 Identities=17% Similarity=0.217 Sum_probs=59.0 Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE Q ss_conf 55699995284789999999999998798899985856863069899999747975820767887787743001144655 Q gi|254780622|r 5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECDL 84 (405) Q Consensus 5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD~ 84 (405) ||||.+.++-+........+...|+++|+.|.+|-+..+. +. .-.|..+-.+.+ .... -+..+|+ T Consensus 1 grkVaiLv~dg~~~~e~~~~~~al~~aG~~v~via~~~g~-v~------~~~g~~~~vd~t-~~~~-------~s~~fDA 65 (142) T cd03132 1 GRKVGILVADGVDAAELSALKAALKAAGANVKVVAPTLGG-VV------DSDGKTLEVDQT-YAGA-------PSVLFDA 65 (142) T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCC-EE------CCCCCEEECCEE-ECCC-------CHHHCCE T ss_conf 9889999669988899999999999889989999579870-77------589988805443-5368-------9647136 Q ss_pred EEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEC Q ss_conf 788411188898852024552146667522799689840 Q gi|254780622|r 85 LVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAP 123 (405) Q Consensus 85 ~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaP 123 (405) ++|..-..+.-.-..+|-+-..+.-.. ...|||-... T Consensus 66 vvipgG~~~~~~L~~~~~~~~fv~eay--~h~KpI~a~~ 102 (142) T cd03132 66 VVVPGGAEAAFALAPSGRALHFVTEAF--KHGKPIGAVG 102 (142) T ss_pred EEECCCCCCHHHHCCCHHHHHHHHHHH--HCCCEEEEEC T ss_conf 884388779888644867999999999--7699799937 No 327 >PRK07979 acetolactate synthase 3 catalytic subunit; Validated Probab=83.20 E-value=3.6 Score=20.89 Aligned_cols=155 Identities=17% Similarity=0.205 Sum_probs=86.2 Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-------EE-CCEEEEECCCCCHHHHHHH----HHHHHCCCCE Q ss_conf 3455899999998631013200179778984042010-------10-2135762157727889999----9998258838 Q gi|254780622|r 168 MSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-------PL-DPMRYIANRSSGQQGHAIA----KSLAYFGAEV 235 (405) Q Consensus 168 l~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-------~I-D~VR~ItN~SSGk~G~~iA----~~~~~~Ga~V 235 (405) -..|..++..+.+.+ .+.-++++-+|+.. ++ .|-||+++.+.|-||+.+. -.+......| T Consensus 371 ~i~p~~~~~~l~~~~--------~~d~iv~~D~G~~~~~~~~~~~~~~p~~~~~~~~~GsmG~~lpaAIGA~lA~p~~~V 442 (574) T PRK07979 371 KIKPQAVIETLWRLT--------KGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETV 442 (574) T ss_pred CCCHHHHHHHHHHHC--------CCCEEEEECCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCE T ss_conf 768899999888617--------997299965884399999866656898053488873112206899999985899978 Q ss_pred EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHH Q ss_conf 99841566776567467546577899999985058887997404444432222101123345577510455218068988 Q gi|254780622|r 236 ILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKI 315 (405) Q Consensus 236 ~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~ 315 (405) .+|.|-.+. --+.+|+..++...++.-++|+.=- -|-..+..+... .. +....-.+...||..+ T Consensus 443 v~i~GDG~f----------~m~~qEL~Ta~r~~lpi~iiV~NN~--~yg~ir~~q~~~--~~-g~~~~~~~~~~pDf~~- 506 (574) T PRK07979 443 VCVTGDGSI----------QMNIQELSTALQYELPVLVLNLNNR--YLGMVKQWQDMI--YS-GRHSQSYMQSLPDFVR- 506 (574) T ss_pred EEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECC--HHHHHHHHHHHH--CC-CCCCCCCCCCCCCHHH- T ss_conf 999781587----------6419999999995899289999587--046999999986--18-8767456689999999- Q ss_pred HHHCCCCCCEEEEEECCCCHHHHHHHHHH-HHCCCC Q ss_conf 76214899589998114123899999999-974998 Q gi|254780622|r 316 IGHHQCRPSIVVGFAAETQCIEQNAREKL-LNKGAD 350 (405) Q Consensus 316 i~~~k~~~~~lVGFkaET~~l~~~A~~Kl-~~K~~D 350 (405) +.+- .. +-|+..|+.+-++.|.++- ...+.+ T Consensus 507 lA~a--~G--~~g~~v~~~~el~~al~~Al~~~~~~ 538 (574) T PRK07979 507 LAEA--YG--HVGIQISHPDELESKLSEALEQVRNN 538 (574) T ss_pred HHHH--CC--CEEEEECCHHHHHHHHHHHHHCCCCC T ss_conf 9997--79--97999789999999999998423799 No 328 >TIGR01136 cysKM cysteine synthases; InterPro: IPR005856 This model discriminates cysteine synthases (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblance to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine. Probab=83.13 E-value=1.1 Score=24.17 Aligned_cols=56 Identities=18% Similarity=0.305 Sum_probs=40.1 Q ss_pred CCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC-C-CCCH Q ss_conf 65578841118889885202455214666752279968984056600000388999999986400013-4-6521 Q gi|254780622|r 82 CDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYF-I-GPES 154 (405) Q Consensus 82 aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~v-i-~P~~ 154 (405) .+-.||=|.|.|| ||+ |..++.+.+- ++++ .|..+| .+|=-+.|+.+|..+ + +|+. T Consensus 61 ~G~~iiEaTSGNT------GIa---LAMvAAarGY-kliL--~MPetm-----S~ERr~~l~ayGA~L~LT~~~~ 118 (315) T TIGR01136 61 PGTTIIEATSGNT------GIA---LAMVAAARGY-KLIL--TMPETM-----SLERRKLLKAYGAELILTPAEE 118 (315) T ss_pred CCCEEEECCCCCH------HHH---HHHHHHHCCC-CEEE--ECCCCH-----HHHHHHHHHHCCCEEEEECCCC T ss_conf 8888984277844------899---9999986199-1899--858871-----7899999987096698837335 No 329 >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, Probab=83.10 E-value=3.6 Score=20.86 Aligned_cols=105 Identities=23% Similarity=0.290 Sum_probs=64.2 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC-----CCCCCCEEEEEHHHHHHHHH Q ss_conf 0179778984042010102135762157727889999999825883899841566-----77656746754657789999 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS-----IADPPNVMTIHVERAEDMLQ 263 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-----~~~~~~~~~i~v~t~~em~~ 263 (405) +|.+++|||-+ +|.||...++++..+|+.-..|+..+. +...-+.+.+. .+++.+ T Consensus 175 ~l~~~~vLviG-----------------aGem~~l~~~~L~~~g~~~i~v~nRt~~ra~~la~~~g~~~~~---~~~l~~ 234 (311) T cd05213 175 NLKGKKVLVIG-----------------AGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVP---LDELLE 234 (311) T ss_pred CCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCEEEC---HHHHHH T ss_conf 72116799986-----------------8799999999999659982599768678999999974989972---999999 Q ss_pred HHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHH Q ss_conf 9985058887997404444432222101123345577510455218068988762 Q gi|254780622|r 264 EVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGH 318 (405) Q Consensus 264 ~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~ 318 (405) .+. .+|++|.|.+-.+|......-.| +......+-+.|---.||=..++. T Consensus 235 ~l~---~~DvvisaT~s~~~~~~~~~~~~--~~~~~~~~iiDLavPRdid~~v~~ 284 (311) T cd05213 235 LLN---EADVVISATGAPHYAKIVERAMK--KRSGKPRLIVDLAVPRDIEPEVGE 284 (311) T ss_pred HHH---HCCEEEEECCCCCCHHHHHHHHH--HCCCCCEEEEEECCCCCCCHHHCC T ss_conf 997---68999992799962035999975--347997699991799987733477 No 330 >PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional Probab=82.98 E-value=3.6 Score=20.90 Aligned_cols=39 Identities=15% Similarity=0.256 Sum_probs=25.5 Q ss_pred CCCCCCEEEEEEECHHHHHHHHHHHHHHHHC--CCEEEEEE Q ss_conf 9888556999952847899999999999987--98899985 Q gi|254780622|r 1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRER--GAVVIPVM 39 (405) Q Consensus 1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~--g~~V~vv~ 39 (405) |-+.|+||+||||||.--.=..+++..|+.. |.++.++- T Consensus 9 ~~~~~~~ilvavSGG~DS~~LL~~L~~l~~~~~~~~l~~~H 49 (433) T PRK10660 9 QLLESRQILVAFSGGLDSTVLLHQLVQWRTQNPGVTLRAIH 49 (433) T ss_pred HCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEE T ss_conf 46999989999728099999999999999866898289999 No 331 >COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] Probab=82.74 E-value=2.3 Score=22.15 Aligned_cols=81 Identities=26% Similarity=0.321 Sum_probs=51.9 Q ss_pred CEEEEEEECHHH--HHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC-CCC--CCCCCC Q ss_conf 569999528478--999999999999879889998585686306989999974797582076788778-774--300114 Q gi|254780622|r 6 KKIALIMCGSVA--VYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGY-ESN--HIQLAN 80 (405) Q Consensus 6 k~IllgvtGsia--a~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~-~~~--Hi~l~~ 80 (405) ++|+++-++|-+ .-=+.-|+|.|++.|..|+++ +.+-.||.|.-.+.+||.+++. ++.|--.. .+. ...-++ T Consensus 1 ~~vvIAg~~SG~GKTTvT~glm~aL~~rg~~Vqpf--KvGPDYIDP~~H~~atG~~srN-LD~~mm~~~~v~~~f~~~~~ 77 (451) T COG1797 1 PAVVIAGTSSGSGKTTVTLGLMRALRRRGLKVQPF--KVGPDYIDPGYHTAATGRPSRN-LDSWMMGEEGVRALFARAAA 77 (451) T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCHHHHHHHCCCCCC-CCHHHCCHHHHHHHHHHHCC T ss_conf 93599548888858999999999998668721665--5687863813566763885677-76544699899999998627 Q ss_pred CCCEEEEEE Q ss_conf 465578841 Q gi|254780622|r 81 ECDLLVVAP 89 (405) Q Consensus 81 ~aD~~iVaP 89 (405) .+|+.||=- T Consensus 78 ~adi~vIEG 86 (451) T COG1797 78 DADIAVIEG 86 (451) T ss_pred CCCEEEEEE T ss_conf 898799961 No 332 >PRK07092 benzoylformate decarboxylase; Reviewed Probab=82.57 E-value=3.8 Score=20.73 Aligned_cols=11 Identities=27% Similarity=0.631 Sum_probs=5.9 Q ss_pred HCCCCEEEEEC Q ss_conf 25883899841 Q gi|254780622|r 230 YFGAEVILISG 240 (405) Q Consensus 230 ~~Ga~V~li~g 240 (405) ...+|+.+.-| T Consensus 261 l~~aDlvl~lG 271 (521) T PRK07092 261 LDGHDLVLVIG 271 (521) T ss_pred HHHCCEEEEEC T ss_conf 85289999968 No 333 >pfam01210 NAD_Gly3P_dh_N NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus. NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain. Probab=82.55 E-value=3.7 Score=20.83 Aligned_cols=25 Identities=44% Similarity=0.454 Sum_probs=18.3 Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 5772788999999982588389984 Q gi|254780622|r 215 RSSGQQGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 215 ~SSGk~G~~iA~~~~~~Ga~V~li~ 239 (405) ...|.+|.+||..+...|++|+++. T Consensus 6 iGaG~wGtAla~~la~n~~~V~l~~ 30 (159) T pfam01210 6 LGAGSWGTALAKVLARNGHEVRLWG 30 (159) T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEE T ss_conf 9969999999999998799899999 No 334 >PRK06912 acoL dihydrolipoamide dehydrogenase; Validated Probab=82.16 E-value=3.2 Score=21.22 Aligned_cols=74 Identities=16% Similarity=0.316 Sum_probs=50.1 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH-----HEECCEEEEECC---------------CCCHHHH Q ss_conf 23334345589999999863101320017977898404201-----010213576215---------------7727889 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTY-----EPLDPMRYIANR---------------SSGQQGH 222 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~-----E~ID~VR~ItN~---------------SSGk~G~ 222 (405) .|.|++.++..+.-. ..+++..+..++++|-.|... .++|..+++++. -.|-.|. T Consensus 109 ~G~a~f~~~~~v~V~-----~~~~~~~i~a~~iiIATGs~P~~~p~~~~d~~~~~~s~~~~~l~~lP~~l~IiGgG~ig~ 183 (458) T PRK06912 109 QGKASFETDHRVRVE-----YGGKEEVVDAEQFIIATGSEPTELPFAPFDGKWILNSSHAMSLPSIPKSLLIVGGGVIGC 183 (458) T ss_pred ECEEEEECCCEEEEE-----CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECHHHCCCCCCCCEEEEECCCHHHH T ss_conf 152798038868998-----699618997418999889877469978878876984655406122796599989974799 Q ss_pred HHHHHHHHCCCCEEEEECC Q ss_conf 9999998258838998415 Q gi|254780622|r 223 AIAKSLAYFGAEVILISGP 241 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~g~ 241 (405) ++|..+...|.+||+|... T Consensus 184 E~A~~~~~~G~~Vtiv~~~ 202 (458) T PRK06912 184 EFASIYSRLGTKVTIVEMA 202 (458) T ss_pred HHHHHHHHCCCEEEEEEEC T ss_conf 9999999659879999844 No 335 >PRK13896 cobyrinic acid a,c-diamide synthase; Provisional Probab=81.16 E-value=2.5 Score=21.87 Aligned_cols=55 Identities=22% Similarity=0.289 Sum_probs=41.8 Q ss_pred CEEEEEEECHHH--HHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCC Q ss_conf 569999528478--999999999999879889998585686306989999974797582 Q gi|254780622|r 6 KKIALIMCGSVA--VYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYT 62 (405) Q Consensus 6 k~IllgvtGsia--a~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~ 62 (405) |.|++.-+.|-+ ..=+.-|++.|++.|..|++. +..-.||.|.-++.++|++++. T Consensus 2 kgilIAa~~SgsGKTtvt~gL~~aL~~rG~~Vq~F--K~GPDYIDP~~h~~a~G~~~~N 58 (432) T PRK13896 2 DGVVLAGTSSGVGKTVATLAVLQALADAGYDVQPA--KAGPDFIDPSHHEAVVDTPSRS 58 (432) T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCHHHHHHHHCCCCCC T ss_conf 62899778999989999999999999784963766--6684751989999996898446 No 336 >PRK06292 dihydrolipoamide dehydrogenase; Validated Probab=81.10 E-value=4.3 Score=20.40 Aligned_cols=52 Identities=17% Similarity=0.291 Sum_probs=35.9 Q ss_pred CCCCCEEEEEECCCH------HEECCEEEEECC---------------CCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 017977898404201------010213576215---------------7727889999999825883899841 Q gi|254780622|r 189 LLKGKRALVTSGPTY------EPLDPMRYIANR---------------SSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 189 ~l~gk~vlITaG~T~------E~ID~VR~ItN~---------------SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) .+..++|+|-.|... +.+|..+++|+. -.|-.|.++|..+...|.+||+|.- T Consensus 128 ~i~a~~vIIATGs~~~~iPg~~~~~~~~~~t~~~~~~~~~~pk~v~VIGgG~ig~E~A~~l~~~G~~Vtvv~~ 200 (460) T PRK06292 128 EIEAKNIVIATGSRPPVIPGSWLILGDRLITSDDAFELDDLPKSLAVIGGGVIGLELGQALSRLGVKVTVFER 200 (460) T ss_pred EEEECEEEEECCCCCCCCCCCCCCCCCCEEECHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEE T ss_conf 9961589996089999999841248872894644533555885699999867887999999846986999962 No 337 >pfam03054 tRNA_Me_trans tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble position of some tRNAs. Probab=81.06 E-value=2.3 Score=22.17 Aligned_cols=29 Identities=34% Similarity=0.448 Sum_probs=20.6 Q ss_pred EEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEE Q ss_conf 69999528478-9999999999998798899985 Q gi|254780622|r 7 KIALIMCGSVA-VYKSLDLIRRLRERGAVVIPVM 39 (405) Q Consensus 7 ~IllgvtGsia-a~k~~~l~~~L~~~g~~V~vv~ 39 (405) ||++|.||++- ++ -+-.|+++|++|.-+. T Consensus 2 kV~VamSGGVDSsV----aA~LL~~~Gy~V~Gv~ 31 (354) T pfam03054 2 KVVVAMSGGVDSSV----AAYLLKEQGYEVIGVF 31 (354) T ss_pred EEEEEECCCHHHHH----HHHHHHHCCCCEEEEE T ss_conf 69999047899999----9999997799639999 No 338 >TIGR01289 LPOR light-dependent protochlorophyllide reductase; InterPro: IPR005979 This family contains the light-dependent, NADPH-dependent form of protochlorophyllide reductase (1.3.1.33 from EC) which catalyses the reactionchlorophyllide A + NADP+ = protochlorophyllide + NADPH. The enzyme belongs to the short chain alcohol dehydrogenase family. ; GO: 0016630 protochlorophyllide reductase activity, 0015995 chlorophyll biosynthetic process, 0019685 photosynthesis dark reaction, 0009507 chloroplast. Probab=81.04 E-value=4.3 Score=20.38 Aligned_cols=71 Identities=25% Similarity=0.329 Sum_probs=46.6 Q ss_pred EEEECCCCCHHHHHHHHHHHHCC-CCEEEEECCC--------CCC-CCCCEEEEEH-----HHHHHHHHHHHHCC-CCCE Q ss_conf 57621577278899999998258-8389984156--------677-6567467546-----57789999998505-8887 Q gi|254780622|r 210 RYIANRSSGQQGHAIAKSLAYFG-AEVILISGPV--------SIA-DPPNVMTIHV-----ERAEDMLQEVLKAL-PVDI 273 (405) Q Consensus 210 R~ItN~SSGk~G~~iA~~~~~~G-a~V~li~g~~--------~~~-~~~~~~~i~v-----~t~~em~~~~~~~~-~~D~ 273 (405) =.||-.||| .|..-|+++..+| ..|..-+-.. ++. +..++.+++. +|....-+.-.+.- +-|+ T Consensus 6 viITGASSG-~GL~~AKAL~~~G~WHV~MACR~l~Ka~~aA~~~G~p~~sYti~~lDL~~LdSVR~FV~~Fr~~gr~Lda 84 (321) T TIGR01289 6 VIITGASSG-LGLYAAKALAETGKWHVVMACRDLLKAEKAAKSLGMPKDSYTILHLDLGSLDSVRQFVEQFRESGRPLDA 84 (321) T ss_pred EEEECCCHH-HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEE T ss_conf 788637313-5789999998639808998144616889999843888666135430134467899999999860784201 Q ss_pred EEEEHHHH Q ss_conf 99740444 Q gi|254780622|r 274 AVMVSAVS 281 (405) Q Consensus 274 ~I~aAAVS 281 (405) +|+.|||- T Consensus 85 LVCNAAVy 92 (321) T TIGR01289 85 LVCNAAVY 92 (321) T ss_pred EEEHHHHH T ss_conf 34213452 No 339 >TIGR00420 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; InterPro: IPR004506 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (2.1.1.61 from EC) catalyses the addition of 5-methylaminomethyl-2-thiouridylate to tRNAs using S-adenosyl-L-methionine as a substrate and releasing S-adenosyl-L-homocysteine. The enzyme is cytoplasmic and is involved in tRNA processing.; GO: 0004808 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity, 0008033 tRNA processing, 0005737 cytoplasm. Probab=80.98 E-value=2.6 Score=21.77 Aligned_cols=29 Identities=34% Similarity=0.558 Sum_probs=22.4 Q ss_pred CEEEEEEECHH----HHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 56999952847----8999999999999879889998585 Q gi|254780622|r 6 KKIALIMCGSV----AVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 6 k~IllgvtGsi----aa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) ++|.||.|||+ ||| .|+++|.+|..|.=+ T Consensus 1 ~kv~VglSGGVDSSVsA~-------lL~~qg~~v~G~ylk 33 (394) T TIGR00420 1 KKVIVGLSGGVDSSVSAY-------LLKQQGYEVVGVYLK 33 (394) T ss_pred CEEEEECCCCHHHHHHHH-------HHHHCCCEEEEEEEE T ss_conf 948998068547899999-------997149658999877 No 340 >PRK09414 glutamate dehydrogenase; Provisional Probab=80.52 E-value=4.5 Score=20.27 Aligned_cols=53 Identities=19% Similarity=0.228 Sum_probs=39.8 Q ss_pred CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCEEEEEH Q ss_conf 32001797789840420101021357621577278899999998258838998415-66776567467546 Q gi|254780622|r 186 KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP-VSIADPPNVMTIHV 255 (405) Q Consensus 186 ~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~-~~~~~~~~~~~i~v 255 (405) ....|+||+|+|.+ +|.-|...|+.+...|+.|.-++.. ..+-.|.|+..-.+ T Consensus 223 ~g~~l~gk~v~IqG-----------------fGNVg~~aA~~l~e~GakvVavSDs~G~Iy~~~Gid~~~L 276 (446) T PRK09414 223 RGDSFEGKTVVVSG-----------------SGNVAIYAIEKAMELGAKVVTCSDSSGYVYDEDGITPEKL 276 (446) T ss_pred CCCCCCCCEEEEEC-----------------CCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHH T ss_conf 49995788799977-----------------7779999999999769979999837860788999899999 No 341 >PRK06835 DNA replication protein DnaC; Validated Probab=80.47 E-value=2 Score=22.58 Aligned_cols=73 Identities=16% Similarity=0.266 Sum_probs=41.1 Q ss_pred EECCCCCHH--HHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEE----EHHHHHHHH Q ss_conf 621577278--89999999825883899841566776567467546577899999985058887997----404444432 Q gi|254780622|r 212 IANRSSGQQ--GHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVM----VSAVSDWRF 285 (405) Q Consensus 212 ItN~SSGk~--G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~----aAAVSDf~~ 285 (405) .++..+||| ..+||+++..+|+.|.+++.+-=+........-.-.+..++++.+ ..+|++|. +=..++|.. T Consensus 189 ~G~~G~GKTfLa~~IA~ell~~g~sViy~ta~~L~~~l~~~~~~~~~~~~~~~~~l---~~~DLLIIDDLG~E~~t~~~~ 265 (330) T PRK06835 189 YGNTGTGKTFLSNCIAKELLDRGKTVIYRTSDELIENLREIRFNNDNDAPELEDLL---INCDLLIIDDLGTESITEFSK 265 (330) T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHH---HHCCEEEEECCCCCCCCHHHH T ss_conf 89999988999999999999879949996299999999997545764489999999---618989972103455886899 Q ss_pred HH Q ss_conf 22 Q gi|254780622|r 286 PK 287 (405) Q Consensus 286 ~~ 287 (405) .. T Consensus 266 ~~ 267 (330) T PRK06835 266 TE 267 (330) T ss_pred HH T ss_conf 99 No 342 >PRK08268 3-hydroxybutyryl-CoA dehydrogenase; Validated Probab=80.00 E-value=2.6 Score=21.74 Aligned_cols=32 Identities=16% Similarity=0.290 Sum_probs=19.6 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 569999528478999999999999879889998585 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) |||.+.=+|.+-. .++..+.+.|++|.++=.. T Consensus 4 ~~VaViGaGtMG~----gIA~~~a~aG~~V~l~D~~ 35 (503) T PRK08268 4 ATVAVIGAGAMGA----GIAQVAAQAGHTVLLYDAR 35 (503) T ss_pred CEEEEECCCHHHH----HHHHHHHHCCCEEEEEECC T ss_conf 7899979688999----9999999389908999799 No 343 >KOG1209 consensus Probab=79.78 E-value=4.7 Score=20.12 Aligned_cols=18 Identities=17% Similarity=0.329 Sum_probs=13.0 Q ss_pred HHHHHHHHHHCCCEEEEE Q ss_conf 999999999879889998 Q gi|254780622|r 21 SLDLIRRLRERGAVVIPV 38 (405) Q Consensus 21 ~~~l~~~L~~~g~~V~vv 38 (405) .-.|.+++.+.|+.|... T Consensus 21 G~ala~ef~~~G~~V~At 38 (289) T KOG1209 21 GYALAKEFARNGYLVYAT 38 (289) T ss_pred HHHHHHHHHHCCEEEEEE T ss_conf 499999998678199997 No 344 >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase; InterPro: IPR011286 This entry describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (IPR002198 from INTERPRO). This protein has been characterised in Erwinia chrysanthemi as an enzyme of pectin degradation .; GO: 0008678 2-deoxy-D-gluconate 3-dehydrogenase activity, 0051287 NAD binding. Probab=79.78 E-value=3.7 Score=20.82 Aligned_cols=62 Identities=26% Similarity=0.415 Sum_probs=33.5 Q ss_pred CCHHH--HHHHHHHHHCCCCEEEEE-CCCCCCCCCCEEEEEHHHHHHHH-HHHHHCCC-------CC----EEEEEHHHH Q ss_conf 72788--999999982588389984-15667765674675465778999-99985058-------88----799740444 Q gi|254780622|r 217 SGQQG--HAIAKSLAYFGAEVILIS-GPVSIADPPNVMTIHVERAEDML-QEVLKALP-------VD----IAVMVSAVS 281 (405) Q Consensus 217 SGk~G--~~iA~~~~~~Ga~V~li~-g~~~~~~~~~~~~i~v~t~~em~-~~~~~~~~-------~D----~~I~aAAVS 281 (405) +|-|| ..||.|...+|-+|-=|+ |...-.... .+ -+|+-. +++++-.| .| +++.++.-| T Consensus 159 ~~v~GlTk~lAnEWa~~ginVNAIAPGY~~T~NT~---~l---RaD~~Rn~~Il~RIPaGrWG~p~D~~G~aVFLaS~AS 232 (249) T TIGR01832 159 HGVAGLTKLLANEWAAKGINVNAIAPGYMETNNTQ---AL---RADEDRNAAILERIPAGRWGTPEDLGGAAVFLASSAS 232 (249) T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCH---HH---CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH T ss_conf 77777899999899873881531158876645515---42---0317778999731789998484000306888877554 Q ss_pred HHH Q ss_conf 443 Q gi|254780622|r 282 DWR 284 (405) Q Consensus 282 Df~ 284 (405) ||. T Consensus 233 dYv 235 (249) T TIGR01832 233 DYV 235 (249) T ss_pred HHH T ss_conf 343 No 345 >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated Probab=79.73 E-value=2.7 Score=21.65 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=22.6 Q ss_pred CCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 98885569999528478999999999999879889998585 Q gi|254780622|r 1 MDLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 1 m~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) |+=.=|+|.+.=+|-+-+ .++-.+-.+|++|.++=.. T Consensus 1 M~~~Ik~VaViGAG~MG~----gIA~~~a~~G~~V~l~D~~ 37 (310) T PRK06130 1 MDNPIQNLAIIGAGAMGS----GIAALFASKGLDVVLIDPM 37 (310) T ss_pred CCCCCCEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC T ss_conf 989988898978779999----9999998589988999799 No 346 >PRK08306 dipicolinate synthase subunit A; Reviewed Probab=79.47 E-value=2.2 Score=22.20 Aligned_cols=143 Identities=18% Similarity=0.245 Sum_probs=81.3 Q ss_pred CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---CCCCEEEEEHHHHHHHH Q ss_conf 320017977898404201010213576215772788999999982588389984156677---65674675465778999 Q gi|254780622|r 186 KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA---DPPNVMTIHVERAEDML 262 (405) Q Consensus 186 ~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~---~~~~~~~i~v~t~~em~ 262 (405) .+..+-|-+++|++- |+.|..+|+.|...||+|+...-..... .-.+.+.+.. +++. T Consensus 146 tp~ti~gs~~lVlG~-----------------Gr~G~~lA~~l~~lGA~V~V~aR~~~~~a~a~~~G~~~v~~---~~L~ 205 (296) T PRK08306 146 TPITIHGSNVLVLGF-----------------GRTGMTLARTLKALGAKVKVGARKSAHLARITEMGYSPVHL---SELA 205 (296) T ss_pred CCCCCCCCCEEEECC-----------------CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEEH---HHHH T ss_conf 996324765899898-----------------68999999999977996999979999999999769858719---9999 Q ss_pred HHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCC-HHHHHHH Q ss_conf 999850588879974044444322221011233455775104552180689887621489958999811412-3899999 Q gi|254780622|r 263 QEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQ-CIEQNAR 341 (405) Q Consensus 263 ~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~-~l~~~A~ 341 (405) +.+ .++|++|-+. |. ++-+.++|+.+ .++.++|-.+-..+ ...+.|+ T Consensus 206 ~~~---~~~D~i~NTI------Pa-------------------~Vlt~~~l~~~----~~~avIIDLAS~PGG~Df~~A~ 253 (296) T PRK08306 206 EEV---GEADIIFNTI------PA-------------------LVLTKNVLSKM----PPHALIIDLASKPGGTDFEYAK 253 (296) T ss_pred HHH---CCCCEEEECC------CH-------------------HHCCHHHHHCC----CCCCEEEEECCCCCCCCHHHHH T ss_conf 773---5699999898------52-------------------54399999418----9996999947799973889999 Q ss_pred HHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHCC Q ss_conf 999974998999920577677777661189998369859727899899999999999998517 Q gi|254780622|r 342 EKLLNKGADFIVSNCILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVADRLCHLIVEHLGM 404 (405) Q Consensus 342 ~Kl~~K~~D~IVAN~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA~~Il~~i~~~L~~ 404 (405) + .|.-.+.|=.+- | ..-|+-+=+.+|+-|.+.|.+.+.+ T Consensus 254 ~----~Gika~lapgLP-------------------G-k~APkTag~Ila~~i~~ll~e~~~~ 292 (296) T PRK08306 254 K----LGIKALLAPGLP-------------------G-KVAPKTAGQILANVLSNLLAEDLIE 292 (296) T ss_pred H----HCCEEEECCCCC-------------------C-CCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 8----398599728999-------------------7-3171539999999999999999986 No 347 >PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional Probab=79.23 E-value=2.7 Score=21.73 Aligned_cols=31 Identities=42% Similarity=0.484 Sum_probs=20.3 Q ss_pred CCCCCEEE-EEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 01797789-8404201010213576215772788999999982588389984 Q gi|254780622|r 189 LLKGKRAL-VTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 189 ~l~gk~vl-ITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~ 239 (405) +|+|++|| |=.|+. .+++.+.+.||+||=|- T Consensus 46 ~l~G~~ILDVGCGgG--------------------~lse~LAr~Ga~VtGID 77 (233) T PRK05134 46 GLFGKRVLDVGCGGG--------------------ILSESMARLGATVTGID 77 (233) T ss_pred CCCCCEEEEECCCCC--------------------HHHHHHHHCCCEEEEEC T ss_conf 668998999755897--------------------11289996799799987 No 348 >PRK06327 dihydrolipoamide dehydrogenase; Validated Probab=79.03 E-value=4.6 Score=20.17 Aligned_cols=52 Identities=23% Similarity=0.453 Sum_probs=40.9 Q ss_pred CCCCCEEEEEECCCHH-----EECCEEEEECC---------------CCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 0179778984042010-----10213576215---------------7727889999999825883899841 Q gi|254780622|r 189 LLKGKRALVTSGPTYE-----PLDPMRYIANR---------------SSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 189 ~l~gk~vlITaG~T~E-----~ID~VR~ItN~---------------SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) .+..++++|-.|.+.- ++|..+++++. -.|-.|.+.|..+.+.|.+||+|.. T Consensus 143 ~i~a~~iiIATGs~p~~lp~~~~~~~~~~ts~~~~~l~~~Pk~~~ViGgG~ig~E~A~~~~~lG~~Vtli~~ 214 (475) T PRK06327 143 VVKAKNVIIATGSEPRHLPGVPFDNEIILDNEGALNFTEVPKKLAVIGAGVIGLELGSVWRRLGAEVTILEA 214 (475) T ss_pred EEEECEEEECCCCCCCCCCCCCCCCCEEECCHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEE T ss_conf 999687999789966669988878743873676516133896799996747589999999954985999985 No 349 >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating); InterPro: IPR004849 This family resembles a larger family of bacterial and eukaryotic 6-phosphogluconate dehydrogenases (Gnd) but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain Gnd, and in Aquifex aeolicus. . Probab=78.76 E-value=1.3 Score=23.82 Aligned_cols=131 Identities=18% Similarity=0.237 Sum_probs=65.6 Q ss_pred HHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCC---CCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHH Q ss_conf 999999987988999858568630698999997479758---20767887787743001144655788411188898852 Q gi|254780622|r 23 DLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVY---THLLSYKEGYESNHIQLANECDLLVVAPASANFIAHVA 99 (405) Q Consensus 23 ~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~---~~~~~~~~~~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A 99 (405) .++++|++.||+|.+.=... .+.+.+.|..-- +.+.+.....++| -=+=|..|+|- T Consensus 15 ni~~rl~~rgh~~vgYd~~q-------~av~~~kG~d~~~gv~nl~E~~~~l~~P-------r~vWvMVPhgn------- 73 (341) T TIGR00872 15 NIAKRLADRGHEVVGYDRDQ-------AAVEELKGEDRAEGVANLKELLKRLSAP-------RVVWVMVPHGN------- 73 (341) T ss_pred HHHHHHHHCCCEEEEECCCH-------HHHHHHHCCCCCCCCHHHHHHHHCCCCC-------CEEEEECCCCH------- T ss_conf 99999852794699853887-------9999972011343001247888417999-------58998628736------- Q ss_pred CCCCCCHHHHH--HHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHCCCCCCCCCCCH-HHHH Q ss_conf 02455214666--752279968984056600000388999999986400013465-2125531032233343455-8999 Q gi|254780622|r 100 HGMVYDLASAI--LLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGP-ESGAMAESNGYGVGRMSEP-CDII 175 (405) Q Consensus 100 ~GiaD~llt~~--~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P-~~g~la~c~~~G~grl~e~-~~I~ 175 (405) |.|..|..+ +|... -+|| -+=|+.-= =-+|.-++|++.|+++++- .+|.+. .-+.|.-=|.=- ++.. T Consensus 74 --ivdaVl~~l~p~L~kG--D~vI-dgGNsyYk---ds~Rry~~lke~gih~LD~GtSGG~~-G~~~G~cfMiGGD~eaf 144 (341) T TIGR00872 74 --IVDAVLRELAPLLEKG--DIVI-DGGNSYYK---DSLRRYKELKEKGIHYLDVGTSGGVL-GKERGYCFMIGGDEEAF 144 (341) T ss_pred --HHHHHHHHHHHHHHCC--CEEE-ECCCCCCH---HHHHHHHHHHHHCCCEEECCCCCCCC-CCCCCCEEEECCCHHHH T ss_conf --7999999766676408--8898-27865123---34788876887187565345457723-04464147751847999 Q ss_pred HHHHHHHH Q ss_conf 99998631 Q gi|254780622|r 176 RQITWLLY 183 (405) Q Consensus 176 ~~~~~~~~ 183 (405) ...+.+|. T Consensus 145 ~~~EplF~ 152 (341) T TIGR00872 145 KKAEPLFK 152 (341) T ss_pred HHHCHHHH T ss_conf 76221443 No 350 >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] Probab=78.65 E-value=5.1 Score=19.89 Aligned_cols=46 Identities=30% Similarity=0.460 Sum_probs=38.1 Q ss_pred CEEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHH Q ss_conf 569999528478-9999999999998798899985856863069899 Q gi|254780622|r 6 KKIALIMCGSVA-VYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLI 51 (405) Q Consensus 6 k~IllgvtGsia-a~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~ 51 (405) +||++.++|+-. ...+.-|.++|++.|++|+..-++...+|+...- T Consensus 2 mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~ag 48 (406) T COG1819 2 MKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAAG 48 (406) T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHC T ss_conf 57999817764322666999999997697499973778999999836 No 351 >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed Probab=78.58 E-value=2.3 Score=22.16 Aligned_cols=62 Identities=24% Similarity=0.303 Sum_probs=33.4 Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEECCCC-----CCCCCCEEEEEHH-HHHHHHHHHHHCCCCCEEEEE Q ss_conf 157727889999999825883899841566-----7765674675465-778999999850588879974 Q gi|254780622|r 214 NRSSGQQGHAIAKSLAYFGAEVILISGPVS-----IADPPNVMTIHVE-RAEDMLQEVLKALPVDIAVMV 277 (405) Q Consensus 214 N~SSGk~G~~iA~~~~~~Ga~V~li~g~~~-----~~~~~~~~~i~v~-t~~em~~~~~~~~~~D~~I~a 277 (405) =..-|+.|+.+|+.+ .+|++|++|--... ....+...++.-. |..+.+.+. ..-.+|++|.+ T Consensus 237 I~Ggg~ig~~la~~L-~~~~~v~iIe~d~~~~~~la~~l~~~~Vi~GD~td~~~L~e~-gi~~aD~~ia~ 304 (455) T PRK09496 237 IAGGGNIGLYLAKLL-EKGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEE-GIDEADAFIAL 304 (455) T ss_pred EECCCHHHHHHHHHH-HCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHH-CCCCCCEEEEE T ss_conf 987869999999987-408838997089899999997478539997887688999763-64556489990 No 352 >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated Probab=78.48 E-value=3.1 Score=21.29 Aligned_cols=33 Identities=15% Similarity=0.059 Sum_probs=20.3 Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 5569999528478999999999999879889998585 Q gi|254780622|r 5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) =|+|.+.=+|.+-+ .++-.+-.+|++|.++=.. T Consensus 3 i~~VaViGaG~MG~----gIA~~~a~~G~~V~l~D~~ 35 (288) T PRK08293 3 IKKVTVAGAGVLGS----QIAFQTAFKGFDVTIYDIS 35 (288) T ss_pred CCEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC T ss_conf 57899989788999----9999999579928999898 No 353 >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated Probab=78.46 E-value=3.1 Score=21.30 Aligned_cols=32 Identities=19% Similarity=0.201 Sum_probs=20.0 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 569999528478999999999999879889998585 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) |+|.+.=+|-+-+ .++..+-.+|++|.++=.. T Consensus 4 k~VaViGaG~MG~----gIA~~~a~~G~~V~l~D~~ 35 (291) T PRK06035 4 KVIGVVGSGVMGQ----GIAQVFARTGYDVTIVDVS 35 (291) T ss_pred CEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC T ss_conf 8899988768899----9999999589988999899 No 354 >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated Probab=78.32 E-value=3.1 Score=21.28 Aligned_cols=33 Identities=18% Similarity=0.108 Sum_probs=20.1 Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 5569999528478999999999999879889998585 Q gi|254780622|r 5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) =|+|.+.=+|-+-+ .++-.+..+|++|.++=.. T Consensus 4 ik~VaViGAG~MG~----giA~~~a~~G~~V~l~D~~ 36 (292) T PRK07530 4 IKKVGVIGAGQMGN----GIAHVCALAGYDVLLNDVS 36 (292) T ss_pred CCEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC T ss_conf 88899989669999----9999999679968999798 No 355 >PRK10799 putative hydrolase-oxidase; Provisional Probab=78.31 E-value=5.2 Score=19.83 Aligned_cols=113 Identities=19% Similarity=0.222 Sum_probs=63.4 Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH---HHHHHHHCCCCCCCCCCEEEEE Q ss_conf 4056600000388999999986400013465212553103223334345589999---9998631013200179778984 Q gi|254780622|r 122 APAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIR---QITWLLYKSKELLLKGKRALVT 198 (405) Q Consensus 122 aPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~---~~~~~~~~~~~~~l~gk~vlIT 198 (405) +=+||+++=.||-.--|....+..|....+.... -.+.|++++|-...+ .+...+ +..++.. T Consensus 93 lya~Ht~lD~~~~~G~N~~La~~Lgl~~~~~~e~------~~~~G~l~~~~~~~e~~~~vk~~l---------~~~~~~~ 157 (247) T PRK10799 93 LYGWHLPLDAHPELGNNAQLAALLGITVMGEIEP------LVPWGELTMPVPGLELASWIEARL---------GRKPLWC 157 (247) T ss_pred EEEECCCHHHCCCCCCHHHHHHHCCCCCCCCCCC------CCCEEEECCCCCHHHHHHHHHHHH---------CCCCEEE T ss_conf 8984157222457780899999809910245566------542133089848999999999982---------9987898 Q ss_pred ECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC-----CCCCEEEEEH Q ss_conf 04201010213576215772788999999982588389984156677-----6567467546 Q gi|254780622|r 199 SGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA-----DPPNVMTIHV 255 (405) Q Consensus 199 aG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~-----~~~~~~~i~v 255 (405) +|...+.|-.|=+.+- || ...-++|...|+|+ ||+|..... .-.++.++.+ T Consensus 158 ~~~~~~~I~rVAv~~G--sG---~~~i~~A~~~gaD~-~ITGd~k~h~~~~A~e~gl~lid~ 213 (247) T PRK10799 158 GDTGPEVVQRVAWCTG--GG---QSFIDSAARFGVDA-FITGEVSEQTIHSAREQGLHFYAA 213 (247) T ss_pred CCCCCCCCEEEEEEEC--CC---HHHHHHHHHCCCCE-EEECCCCHHHHHHHHHCCCEEEEC T ss_conf 7789764208999948--72---89999999869999-996685538899999779969975 No 356 >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc Probab=78.23 E-value=5.3 Score=19.82 Aligned_cols=20 Identities=35% Similarity=0.449 Sum_probs=10.3 Q ss_pred CCHHHHHHHHHHHHCCCCEE Q ss_conf 72788999999982588389 Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVI 236 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~ 236 (405) -|..|..+|+.+...|++|+ T Consensus 36 ~GnVG~~~A~~l~~~Gakvv 55 (200) T cd01075 36 LGKVGYKLAEHLLEEGAKLI 55 (200) T ss_pred CCHHHHHHHHHHHHCCCEEE T ss_conf 87999999999996799799 No 357 >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. Probab=77.98 E-value=5.4 Score=19.77 Aligned_cols=183 Identities=22% Similarity=0.191 Sum_probs=91.9 Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH-HHHHHCCHHHHHHH--HCCCCCCCCCCCCCC-------- Q ss_conf 8885569999528478999999999999879889998585-68630698999997--479758207678877-------- Q gi|254780622|r 2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK-SAQKFITPLIVGAI--SNRRVYTHLLSYKEG-------- 70 (405) Q Consensus 2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~-~A~~fi~~~~l~~l--t~~~v~~~~~~~~~~-------- 70 (405) +|+|.||..++-= -.|+.-|++.|+..|++|++.-+. -++ .+..-.+| .|-+|+-......++ T Consensus 33 Pl~G~rI~~clHl---e~kTA~L~~tL~~~GA~V~~~~~NplST---QDdvaAaL~~~gi~VfA~~g~s~eey~~~l~~~ 106 (413) T cd00401 33 PLKGARIAGCLHM---TVQTAVLIETLVALGAEVRWSSCNIFST---QDHAAAAIAAAGIPVFAWKGETLEEYWWCIEQA 106 (413) T ss_pred CCCCCEEEEEEEC---HHHHHHHHHHHHHCCCEEEEECCCCCCC---HHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH T ss_conf 9899889999820---5889999999998599899963797653---289999999679769984799989999999999 Q ss_pred ----CCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHH--HCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH Q ss_conf ----877430011446557884111888988520245521466675--22799689840566000003889999999864 Q gi|254780622|r 71 ----YESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAILL--AKGDQPVLIAPAMNFMMWAKPATQRNVEILQK 144 (405) Q Consensus 71 ----~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~l--a~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~ 144 (405) ..-||+-+-.=+|+....--..--+.+--.|.+.---|.+.. +-.+.-.+-+|+++.| + ..++ T Consensus 107 L~~~~~~P~iiiDDG~Dl~~~~h~~~~~~~~~i~G~~EETTTGv~RL~am~~~g~L~fP~iaVN--D-a~tK-------- 175 (413) T cd00401 107 LKFPDGEPNMILDDGGDLTLLIHKKHPELLPGIRGISEETTTGVHRLYKMEKEGKLKFPAINVN--D-SVTK-------- 175 (413) T ss_pred HHCCCCCCCEEECCCCCHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEC--C-HHHH-------- T ss_conf 8287999646861441221213405746774201245553088999999997698278678863--6-6663-------- Q ss_pred HCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHH Q ss_conf 00013465212553103223334345589999999863101320017977898404201010213576215772788999 Q gi|254780622|r 145 DGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAI 224 (405) Q Consensus 145 ~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~i 224 (405) .+. =+.+|.| ...++.+.+.- ...+.||+|+|-+=| --|.-+ T Consensus 176 -----------~~F-DNrYGtg-----qS~~dgi~r~T----n~liaGK~vVV~GYG-----------------~~GkG~ 217 (413) T cd00401 176 -----------SKF-DNLYGCR-----ESLIDGIKRAT----DVMIAGKVAVVAGYG-----------------DVGKGC 217 (413) T ss_pred -----------HHC-CCCCCCC-----HHHHHHHHHHH----HHEECCCEEEEECCC-----------------CCCHHH T ss_conf -----------340-1443332-----10899999874----212137779994577-----------------635688 Q ss_pred HHHHHHCCCCEEEEE Q ss_conf 999982588389984 Q gi|254780622|r 225 AKSLAYFGAEVILIS 239 (405) Q Consensus 225 A~~~~~~Ga~V~li~ 239 (405) |..+.-.||.|+..- T Consensus 218 A~r~rglGA~V~VtE 232 (413) T cd00401 218 AQSLRGQGARVIVTE 232 (413) T ss_pred HHHHHHCCCEEEEEC T ss_conf 998865898899971 No 358 >PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Probab=77.98 E-value=4.7 Score=20.14 Aligned_cols=33 Identities=36% Similarity=0.429 Sum_probs=21.6 Q ss_pred CCCCCEEE-EEEECHHHHHHHHHHHHHHHHCCCEEEEEE Q ss_conf 88855699-995284789999999999998798899985 Q gi|254780622|r 2 DLSGKKIA-LIMCGSVAVYKSLDLIRRLRERGAVVIPVM 39 (405) Q Consensus 2 ~l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~ 39 (405) .|+||||+ +|+.+|- .-.++.|.+.|++|.+.= T Consensus 6 ~~~gk~v~v~GlG~sG-----~s~a~~L~~~G~~V~~~D 39 (457) T PRK01390 6 SFKGKTVALFGLGGSG-----LATARALKAGGAEVIAWD 39 (457) T ss_pred CCCCCEEEEEEECHHH-----HHHHHHHHHCCCEEEEEE T ss_conf 0289989999436999-----999999997899799993 No 359 >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated Probab=77.93 E-value=3.3 Score=21.10 Aligned_cols=33 Identities=12% Similarity=0.253 Sum_probs=20.2 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH Q ss_conf 5699995284789999999999998798899985856 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~ 42 (405) |||.+.=+|.+-+ .++-.+..+|++|.++=... T Consensus 3 ~kV~ViGaG~mG~----~IA~~~a~~G~~V~l~D~~~ 35 (284) T PRK07819 3 QRVGVVGAGQMGS----GIAEVCARAGVDVLVFETTE 35 (284) T ss_pred CEEEEECCCHHHH----HHHHHHHHCCCEEEEEECCH T ss_conf 6799989778999----99999995799089997988 No 360 >PRK09117 consensus Probab=77.85 E-value=3.4 Score=21.03 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=19.6 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 569999528478999999999999879889998585 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) |||.+.=+|.+-+ .++-.+..+|++|.++=.. T Consensus 3 ~~VaViGaG~mG~----~iA~~~a~~G~~V~l~D~~ 34 (282) T PRK09117 3 QTVGIIGAGTMGN----GIAQACAVAGLDVVMVDIS 34 (282) T ss_pred CEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC T ss_conf 7799989779999----9999999679968999898 No 361 >PRK08322 acetolactate synthase; Reviewed Probab=77.83 E-value=5.4 Score=19.74 Aligned_cols=10 Identities=30% Similarity=0.375 Sum_probs=5.2 Q ss_pred CCCCEEEEEC Q ss_conf 5883899841 Q gi|254780622|r 231 FGAEVILISG 240 (405) Q Consensus 231 ~Ga~V~li~g 240 (405) ..+|+.+.-| T Consensus 261 ~~aDlvl~iG 270 (547) T PRK08322 261 EHADLIINVG 270 (547) T ss_pred HCCCEEEEEC T ss_conf 6498689815 No 362 >cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway. Probab=77.75 E-value=5.4 Score=19.73 Aligned_cols=20 Identities=20% Similarity=0.233 Sum_probs=8.8 Q ss_pred CCCCCHHHHHHHHHHHHHHHH Q ss_conf 278998999999999999985 Q gi|254780622|r 382 YPELPKAEVADRLCHLIVEHL 402 (405) Q Consensus 382 ~~~~sK~~iA~~Il~~i~~~L 402 (405) ++..+..++. ++++.|.+-| T Consensus 336 mG~~~~~di~-~~l~al~~~L 355 (356) T cd06451 336 MGEATREDVL-GVLSALEEAL 355 (356) T ss_pred CCCCCHHHHH-HHHHHHHHHH T ss_conf 9899999999-9999999985 No 363 >PRK07660 consensus Probab=77.72 E-value=3.3 Score=21.14 Aligned_cols=34 Identities=21% Similarity=0.119 Sum_probs=20.7 Q ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 85569999528478999999999999879889998585 Q gi|254780622|r 4 SGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 4 ~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) +=|||.+.=+|-+-+ .++-.+..+|++|.++=.. T Consensus 2 ~Ik~VaViGaG~MG~----gIA~~~a~~G~~V~l~D~~ 35 (283) T PRK07660 2 GVQKIVVIGAGQMGS----GIAQVCAMAGYDVKVQDLK 35 (283) T ss_pred CCCEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC T ss_conf 978899989698999----9999999669818999798 No 364 >cd01998 tRNA_Me_trans tRNA methyl transferase. This family represents tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase which is involved in the biosynthesis of the modified nucleoside 5-methylaminomethyl-2-thiouridine present in the wobble position of some tRNAs. This family of enzyme only presents in bacteria and eukaryote. The archaeal counterpart of this enzyme performs same function, but is completely unrelated in sequence. Probab=77.47 E-value=3.2 Score=21.22 Aligned_cols=29 Identities=34% Similarity=0.462 Sum_probs=20.4 Q ss_pred EEEEEEECHHH-HHHHHHHHHHHHHCCCEEEEEE Q ss_conf 69999528478-9999999999998798899985 Q gi|254780622|r 7 KIALIMCGSVA-VYKSLDLIRRLRERGAVVIPVM 39 (405) Q Consensus 7 ~IllgvtGsia-a~k~~~l~~~L~~~g~~V~vv~ 39 (405) ||++|.||++- ++ -+-+|+++|++|.-+. T Consensus 1 kV~v~mSGGVDSsv----aA~LL~~~G~~V~gv~ 30 (349) T cd01998 1 KVVVAMSGGVDSSV----AAALLKEQGYEVIGVF 30 (349) T ss_pred CEEEECCCCHHHHH----HHHHHHHCCCCEEEEE T ss_conf 98999077899999----9999987799579999 No 365 >PRK05562 precorrin-2 dehydrogenase; Provisional Probab=77.28 E-value=5.3 Score=19.79 Aligned_cols=152 Identities=15% Similarity=0.148 Sum_probs=72.4 Q ss_pred CCCCC--EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 88855--6999952847899999999999987988999858568630698999997479758207678877877430011 Q gi|254780622|r 2 DLSGK--KIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLA 79 (405) Q Consensus 2 ~l~~k--~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~ 79 (405) +|..+ |+|+.=.|.||.-|+.. |.+.|+.|+||.-+- ++...+......+ +-. .......+ | T Consensus 19 ~l~s~klkvLVVGGG~VA~RKi~~----Ll~agA~VtVVSP~~-----~~el~~L~~~~~I-~~i---~r~y~~~d--L- 82 (222) T PRK05562 19 SLLSNKIKVLVIGGGKAAFIKGKT----FLKKGCYVEILSKEF-----SKEFLDLKKYGNL-KLI---KGNYDKEF--I- 82 (222) T ss_pred EEECCCCEEEEECCCHHHHHHHHH----HHHCCCEEEEECCCC-----CHHHHHHHHCCCE-EEE---ECCCCHHH--C- T ss_conf 431267669999987999999999----987899899987866-----8899999975986-999---68679778--0- Q ss_pred CCCCEEEEEECCHH-----HHHHHHC--C----CCCCHHHHHHH---HCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 44655788411188-----8988520--2----45521466675---227996898405660000038899999998640 Q gi|254780622|r 80 NECDLLVVAPASAN-----FIAHVAH--G----MVYDLASAILL---AKGDQPVLIAPAMNFMMWAKPATQRNVEILQKD 145 (405) Q Consensus 80 ~~aD~~iVaPaTaN-----tiaK~A~--G----iaD~llt~~~l---a~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~ 145 (405) . |.++|.-||-| .+++.|. | .+||+-.+.+. ...+.|+++|-+-.. .+|+..+.++.=-+. T Consensus 83 ~--~~~LVIaATdd~~lN~~I~~~a~~~~ilvNvvddp~~~~fi~Paiv~Rg~L~IAIST~G---~SP~lAr~iR~klE~ 157 (222) T PRK05562 83 K--DKHLIIIATDDEELNNKIRKHCDRLYKLYIDCSDFKKGLCVIPYQRSSKNMVFALNTKG---GSPKTSVFIGEKVKN 157 (222) T ss_pred C--CCCEEEEECCCHHHHHHHHHHHHHHCCEEEECCCCCCCCEEECEEEEECCEEEEEECCC---CCHHHHHHHHHHHHH T ss_conf 8--87399994798899999999999809988985788768179770997289799998999---897999999999999 Q ss_pred CCCCCCCCHHHHHHCCCCCCC-----CCCCHHHHHHHHHH Q ss_conf 001346521255310322333-----43455899999998 Q gi|254780622|r 146 GCYFIGPESGAMAESNGYGVG-----RMSEPCDIIRQITW 180 (405) Q Consensus 146 g~~vi~P~~g~la~c~~~G~g-----rl~e~~~I~~~~~~ 180 (405) ++ |+++.+.+ -.|.= +.+.-.+|+.+++. T Consensus 158 ---~~-pey~~~~~--~~g~~R~k~K~~~~k~ei~~~i~~ 191 (222) T PRK05562 158 ---FL-KKYDDFIE--YVTKIRNIIKKSELKDEIINFISS 191 (222) T ss_pred ---HH-HHHHHHHH--HHHHHHHHHCCCHHHHHHHHHHHH T ss_conf ---87-88999999--999999985261579999999854 No 366 >PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Probab=76.46 E-value=5.9 Score=19.50 Aligned_cols=72 Identities=24% Similarity=0.304 Sum_probs=36.6 Q ss_pred CCCCCEEEEEEEC--HHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 8885569999528--47899999999999987988999858568630698999997479758207678877877430011 Q gi|254780622|r 2 DLSGKKIALIMCG--SVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLA 79 (405) Q Consensus 2 ~l~~k~IllgvtG--siaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~ 79 (405) .|+||||+|.=-| +.| .++.|.++|+.+.+...+..... .+ .+.+.......+. +. .. +.- T Consensus 5 ~~~gkkv~V~GlG~sG~a------aa~~L~~~g~~~~v~~~~~~~~~-~~--~~~~~~~~~~~~~-~~----~~---~~l 67 (468) T PRK04690 5 QLEGKRVALWGWGREGRA------AYRALRAQLPAQPLTVFCNAEEV-RE--VGALADAALLVET-EA----SA---QRL 67 (468) T ss_pred HCCCCEEEEEEECHHHHH------HHHHHHHCCCEEEEEECCCCCCC-HH--HHHHCCCCCEEEC-CC----CH---HHH T ss_conf 439797999834787999------99999966990499972883246-46--6762045756746-77----85---576 Q ss_pred CCCCEEEEEEC Q ss_conf 44655788411 Q gi|254780622|r 80 NECDLLVVAPA 90 (405) Q Consensus 80 ~~aD~~iVaPa 90 (405) ..+|++|+.|- T Consensus 68 ~~~d~vv~SPG 78 (468) T PRK04690 68 AAFEVVVKSPG 78 (468) T ss_pred HCCCEEEECCC T ss_conf 14889998995 No 367 >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated Probab=75.97 E-value=4 Score=20.55 Aligned_cols=34 Identities=21% Similarity=0.183 Sum_probs=21.3 Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH Q ss_conf 55699995284789999999999998798899985856 Q gi|254780622|r 5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~ 42 (405) =|||.+.=+|.+-+ .++-.+.++|++|.++=... T Consensus 3 i~~VaViGaG~mG~----~IA~~~a~~G~~V~l~D~~~ 36 (282) T PRK05808 3 IQKIGVIGAGTMGN----GIAQVCAVAGYDVVMVDISD 36 (282) T ss_pred CCEEEEECCCHHHH----HHHHHHHHCCCCEEEEECCH T ss_conf 26899989788999----99999995799389997998 No 368 >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated Probab=75.96 E-value=6.1 Score=19.41 Aligned_cols=32 Identities=28% Similarity=0.217 Sum_probs=22.5 Q ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH Q ss_conf 699995284789999999999998798899985856 Q gi|254780622|r 7 KIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 7 ~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~ 42 (405) ||.+.=+|+.. --|...|.+.|++|+....+. T Consensus 3 kI~ViGaGawG----tAlA~~la~n~~~V~lw~r~~ 34 (325) T PRK00094 3 KIAVLGAGSWG----TALAILLARNGHDVVLWGRDP 34 (325) T ss_pred EEEEECCCHHH----HHHHHHHHHCCCEEEEEEECH T ss_conf 89998989999----999999997899789998389 No 369 >TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate. Probab=75.69 E-value=6.2 Score=19.37 Aligned_cols=176 Identities=20% Similarity=0.186 Sum_probs=100.7 Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEE Q ss_conf 89840566000003889999999864000134652125531032233343455899999998631013200179778984 Q gi|254780622|r 119 VLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVT 198 (405) Q Consensus 119 i~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlIT 198 (405) .++-|-=...-.+....+++++.|...|+.-+-+ ||-.|.+-....++-..-+...... .+|+ +.|- T Consensus 12 a~vTPF~~dg~iD~~~~~~~i~~l~~~Gv~gi~v-------~GstGE~~~Ls~eEr~~l~~~~~~~-----~~g~-~~vi 78 (296) T TIGR03249 12 FPVTPFDADGSFDEAAYRENIEWLLGYGLEALFA-------AGGTGEFFSLTPAEYEQVVEIAVST-----AKGK-VPVY 78 (296) T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CCCCCCHHHCCHHHHHHHHHHHHHH-----CCCC-CEEE T ss_conf 0248668987879999999999999779998997-------8305166658999999999999998-----3898-4151 Q ss_pred ECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEH Q ss_conf 04201010213576215772788999999982588389984156677656746754657789999998505888799740 Q gi|254780622|r 199 SGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVS 278 (405) Q Consensus 199 aG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aA 278 (405) +|-. .|+ +--..+|+++...|++-.++.-| ++....-+...+.++.+.+..+..+++-. T Consensus 79 ~gvg------------~~t-~~ai~la~~a~~~Gad~v~v~pP-------yy~~~~~~~l~~~f~~ia~a~~~pi~lYn- 137 (296) T TIGR03249 79 TGVG------------GNT-SDAIEIARLAEKAGADGYLLLPP-------YLINGEQEGLYAHVEAVCESTDLGVIVYQ- 137 (296) T ss_pred CCCC------------HHH-HHHHHHHHHHHHCCCCEEEECCC-------CCCCCCHHHHHHHHHHHHHHCCCCEEEEC- T ss_conf 2786------------129-99999999998759997897799-------88999999999999999971599778730- Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 444443222210112334557751045521806898876214899589998114123899999999974998999920 Q gi|254780622|r 279 AVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNC 356 (405) Q Consensus 279 AVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~ 356 (405) + ... .-+|+.+.++.++ .| -++|+|--+.++... .+-.++-+-++.+.+. T Consensus 138 -----~------------~~~-------~~~~~~l~~L~~~-~p--~i~giK~s~~d~~~~-~~~~~~~~~~~~~~~g 187 (296) T TIGR03249 138 -----R------------DNA-------VLNADTLERLADR-CP--NLVGFKDGIGDMEQM-IEITQRLGDRLGYLGG 187 (296) T ss_pred -----C------------CCC-------CCCHHHHHHHHHC-CC--CEEEEEECCCCHHHH-HHHHHHCCCCCEEEEC T ss_conf -----7------------787-------8799999999815-79--879999776689999-9999973997279738 No 370 >pfam07993 NAD_binding_4 Male sterility protein. This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Probab=75.68 E-value=6.2 Score=19.37 Aligned_cols=25 Identities=12% Similarity=0.090 Sum_probs=12.7 Q ss_pred EEECHHHHHHHHHHHHHHHHCCC--EEEEEE Q ss_conf 95284789999999999998798--899985 Q gi|254780622|r 11 IMCGSVAVYKSLDLIRRLRERGA--VVIPVM 39 (405) Q Consensus 11 gvtGsiaa~k~~~l~~~L~~~g~--~V~vv~ 39 (405) |.||-|- -.|+++|.+.+. .|.++. T Consensus 3 GaTGFlG----~~ll~~Ll~~~~~~~V~~Lv 29 (245) T pfam07993 3 GATGFLG----KVLLEKLLRSCPEVKIYCLV 29 (245) T ss_pred CCHHHHH----HHHHHHHHHCCCCCEEEEEE T ss_conf 8435999----99999999579997899996 No 371 >pfam02737 3HCDH_N 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain. This family also includes lambda crystallin. Probab=75.19 E-value=3.3 Score=21.12 Aligned_cols=26 Identities=35% Similarity=0.473 Sum_probs=22.9 Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 57727889999999825883899841 Q gi|254780622|r 215 RSSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 215 ~SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) --+|.||..||..+...|++|++.-- T Consensus 5 iGaG~mG~~iA~~~a~~G~~V~l~D~ 30 (180) T pfam02737 5 IGAGTMGAGIAQVFARAGLEVVLVDI 30 (180) T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEEC T ss_conf 99788999999999967993999979 No 372 >TIGR01035 hemA glutamyl-tRNA reductase; InterPro: IPR000343 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents glutamyl-tRNA reductase (1.2.1.70 from EC), which reduces glutamyl-tRNA to glutamate-1-semialdehyde during the first stage of tetrapyrrole biosynthesis by the C5 pathway , . This enzyme required NADPH as a coenzyme.; GO: 0008883 glutamyl-tRNA reductase activity, 0050661 NADP binding, 0033014 tetrapyrrole biosynthetic process. Probab=75.15 E-value=6.4 Score=19.28 Aligned_cols=145 Identities=18% Similarity=0.224 Sum_probs=77.9 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCC------CCCEEEEEHH--HHHH Q ss_conf 0179778984042010102135762157727889999999825883899841566776------5674675465--7789 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIAD------PPNVMTIHVE--RAED 260 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~------~~~~~~i~v~--t~~e 260 (405) .|+|+|+||-+ -|+||...|+++...|..=.+|.+.+...- .++-..+.+. ..++ T Consensus 182 rL~~~~~LliG-----------------AGeMg~Lva~~L~~~~v~~~~i~NRt~~rA~~LA~e~~~P~~~~f~~La~~~ 244 (436) T TIGR01035 182 RLKGKKVLLIG-----------------AGEMGELVAKHLREKGVGKVLIANRTYERAEKLAKELGGPEAVKFEALALEK 244 (436) T ss_pred CCCCCEEEEEE-----------------CCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHH T ss_conf 11664189982-----------------7457999999996489528988556778999999870786645444554899 Q ss_pred HHHHHHHCCCCCEEEEEHHHHHHHHHHH--HHCCCCC--CC-CCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCH Q ss_conf 9999985058887997404444432222--1011233--45-57751045521806898876214899589998114123 Q gi|254780622|r 261 MLQEVLKALPVDIAVMVSAVSDWRFPKI--AGTKIKR--KD-IGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQC 335 (405) Q Consensus 261 m~~~~~~~~~~D~~I~aAAVSDf~~~~~--~~~Kikk--~s-~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~ 335 (405) |.+.+. .+|++|+|-+-++|.+.+- ..-...+ .+ ....+-+.+--=.|+=..+++. ++. |-..-|| T Consensus 245 L~~~L~---~~DivissTgA~~pi~~~~~~e~a~~~Rr~de~~~pl~~~DIAvPRdvd~~v~~L--~~v----fLy~vDD 315 (436) T TIGR01035 245 LEEALA---EADIVISSTGAPEPIVSKEDVERALKERRRDEAARPLFIVDIAVPRDVDPEVAKL--EGV----FLYDVDD 315 (436) T ss_pred HHHHHH---HCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHCC--CCE----EEEEECC T ss_conf 999974---2889998557653100203489999972220015886999758899863786222--966----9973031 Q ss_pred HHH----HHH-HHHHHCCCCEEEEECCCC Q ss_conf 899----999-999974998999920577 Q gi|254780622|r 336 IEQ----NAR-EKLLNKGADFIVSNCILP 359 (405) Q Consensus 336 l~~----~A~-~Kl~~K~~D~IVAN~i~~ 359 (405) |.. |.. .+-....+-.||+.-+.+ T Consensus 316 L~~~~~~N~a~R~~~~~~ae~I~~~E~~~ 344 (436) T TIGR01035 316 LKEVVEENLAERREEAEKAELIVEEEVAE 344 (436) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 38999999999999999999999999999 No 373 >TIGR02536 eut_hyp ethanolamine utilization protein; InterPro: IPR013372 Proteins in this entry are encoded in operons for the polyhedral organelle-based degradation of ethanolamine. This family is not found in proteobacterial species, which otherwise have the same suite of genes in the eut operon. Proteobacteria have two genes that are not found in other species which encode proteins which may complement this family's function - a phosphotransacetylase (IPR002505 from INTERPRO), and EutJ (IPR013366 from INTERPRO) which is of unknown function.. Probab=75.06 E-value=4.6 Score=20.18 Aligned_cols=101 Identities=23% Similarity=0.284 Sum_probs=65.5 Q ss_pred CCCCCE-----EEEEECCHHHHHHHHCCCCCCH----HHHHHHHCCCCCEEEE-CCCCCHHHHH--H-----HHHHHHHH Q ss_conf 144655-----7884111888988520245521----4666752279968984-0566000003--8-----89999999 Q gi|254780622|r 79 ANECDL-----LVVAPASANFIAHVAHGMVYDL----ASAILLAKGDQPVLIA-PAMNFMMWAK--P-----ATQRNVEI 141 (405) Q Consensus 79 ~~~aD~-----~iVaPaTaNtiaK~A~GiaD~l----lt~~~la~~~~pi~ia-PaMn~~M~~~--p-----~~~~nl~~ 141 (405) .+.||. +||--.|-+-|+.+|+|.+.|= .+..+| .++||++- |-.--+-|.| | ..+++.+. T Consensus 58 ~~~~dietyefLl~~~L~i~~L~nIs~~~~~~~~E~~I~~~LL--~GK~~~il~~Gie~~kY~nt~p~~l~~~~~ey~e~ 135 (248) T TIGR02536 58 EKAADIETYEFLLVSKLSIKELANISKGAETNEKEKFILEFLL--EGKPVYILKEGIEYSKYENTAPYALKQKYQEYEEK 135 (248) T ss_pred HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHH--CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH T ss_conf 5533631233354333167899999733311227899999986--79948997477530013342128999999999886 Q ss_pred HHHHC-CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 86400-01346521255310322333434558999999986 Q gi|254780622|r 142 LQKDG-CYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWL 181 (405) Q Consensus 142 L~~~g-~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~ 181 (405) |.++| +.|.+-..-.-...+++-.----..|.+-..++.. T Consensus 136 l~~fGlI~~~~~~~~i~~~~~~e~v~g~~~~E~~~k~L~~~ 176 (248) T TIGR02536 136 LKSFGLIEFIDSENYITKESKDEEVKGSGIKEKLEKKLRSL 176 (248) T ss_pred HHHCCCEEEEECHHHHHHHHHCCCEECCCCHHHHHHHHHHH T ss_conf 64276258860035665654055000155237778888765 No 374 >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process. Probab=74.92 E-value=6.5 Score=19.24 Aligned_cols=150 Identities=20% Similarity=0.247 Sum_probs=86.5 Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CCCCEEEE-------EHHHHHHHHHHHHHCCCCCEEEEEHHH Q ss_conf 772788999999982588389984156677--------65674675-------465778999999850588879974044 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFGAEVILISGPVSIA--------DPPNVMTI-------HVERAEDMLQEVLKALPVDIAVMVSAV 280 (405) Q Consensus 216 SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~--------~~~~~~~i-------~v~t~~em~~~~~~~~~~D~~I~aAAV 280 (405) ||.=-|.|||+.|.+.|++|.+-++..... .-.|.+.. +.+..++|.+++.+.+..|++|-.|=+ T Consensus 6 asRGIG~AIA~~LA~~Ga~V~i~y~~~e~~~~~~~~e~~~~G~~a~~~~~dvs~~~~~~~~~~~~~~~~GiDiLVNNAGI 85 (238) T TIGR01830 6 ASRGIGRAIALKLAKEGAKVIITYRTSEEGAEEVVEEIKELGVKAAGVVLDVSDREDVKALVEEAEEELGIDILVNNAGI 85 (238) T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCC T ss_conf 78616799999998679959996598257888999999856975999960388889999999999998299089978741 Q ss_pred HHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHH--CCCCCCE------EEEEEC---CCC------HHHHHHHHH Q ss_conf 44432222101123345577510455218068988762--1489958------999811---412------389999999 Q gi|254780622|r 281 SDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGH--HQCRPSI------VVGFAA---ETQ------CIEQNAREK 343 (405) Q Consensus 281 SDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~--~k~~~~~------lVGFka---ET~------~l~~~A~~K 343 (405) --=.. -=..|-.++++.+.+.|+-+--+-+.+.+ .|+|... +||+.= |++ =++-=.|.- T Consensus 86 TrD~L----l~RMk~edWd~Vi~~NL~g~F~~t~~v~~~M~K~R~GrIINisSVVG~~GN~GQaNYaASKAG~IGftKSl 161 (238) T TIGR01830 86 TRDNL----LMRMKEEDWDAVINVNLKGVFNLTQAVLRPMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSL 161 (238) T ss_pred CCCCH----HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHH T ss_conf 34301----00488556899998612668788899889887506743486100200006874267888875589999999 Q ss_pred HHHCCCCEEEEECCCCCCCCCCCCCEEE Q ss_conf 9974998999920577677777661189 Q gi|254780622|r 344 LLNKGADFIVSNCILPDTGFVGKEWNKV 371 (405) Q Consensus 344 l~~K~~D~IVAN~i~~~~~~fgsd~n~v 371 (405) -++=+--=|=+|-|.+ ||..+|.+.. T Consensus 162 AkElasRnItVNaVAP--GFI~TdMT~~ 187 (238) T TIGR01830 162 AKELASRNITVNAVAP--GFIETDMTDK 187 (238) T ss_pred HHHCCCCCCEEEEECC--CCCCCCCCHH T ss_conf 9860368705888748--9989700021 No 375 >LOAD_USPA consensus Probab=74.88 E-value=6.5 Score=19.24 Aligned_cols=33 Identities=36% Similarity=0.417 Sum_probs=21.6 Q ss_pred CEEEEEEECHHHHHHHHHHHHHH-HHCCCEEEEE Q ss_conf 56999952847899999999999-9879889998 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRL-RERGAVVIPV 38 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L-~~~g~~V~vv 38 (405) ||||+++-||-.+.++.+.+-.+ ++.++++.++ T Consensus 1 k~Ilv~vd~s~~s~~a~~~A~~la~~~~a~l~~l 34 (135) T LOAD_USPA 1 KKILVAIDGSPESEKALRWAVDLAKRRGAELILL 34 (135) T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEE T ss_conf 9899998699899999999999998749989999 No 376 >PRK06116 glutathione reductase; Validated Probab=74.84 E-value=6.5 Score=19.23 Aligned_cols=71 Identities=17% Similarity=0.147 Sum_probs=46.6 Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEE--CCEEE----------------EECCCCCHHHHH Q ss_conf 223334345589999999863101320017977898404201010--21357----------------621577278899 Q gi|254780622|r 162 GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPL--DPMRY----------------IANRSSGQQGHA 223 (405) Q Consensus 162 ~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~I--D~VR~----------------ItN~SSGk~G~~ 223 (405) .+|.|++.++..+.- ....+..++++|-.|.+.-.. ....+ +.---.|-.|.+ T Consensus 111 ~~g~a~f~~~~tv~v---------~~~~i~a~~ivIATGs~p~~p~ipG~e~~~tsd~~~~l~~lP~~v~IiGgG~ig~E 181 (450) T PRK06116 111 IEGFARFVDAHTVEV---------NGETYTADHILIATGGRPSIPDIPGAEYGITSDGFFALEELPKRVAVVGAGYIAVE 181 (450) T ss_pred EEEEEEECCCCCCCC---------CCEEEEEEEEEECCCCCCCCCCCCCCCEEEECHHHCCCCCCCCEEEEECCCHHHHH T ss_conf 970688726874035---------98298541799987897758999881126614452254547977999999666999 Q ss_pred HHHHHHHCCCCEEEEECC Q ss_conf 999998258838998415 Q gi|254780622|r 224 IAKSLAYFGAEVILISGP 241 (405) Q Consensus 224 iA~~~~~~Ga~V~li~g~ 241 (405) +|..+...|.+||+|.-. T Consensus 182 ~A~~~~~lG~~Vtlv~~~ 199 (450) T PRK06116 182 FAGVLHGLGSETHLFVRG 199 (450) T ss_pred HHHHHHHHCCEEEEEEEC T ss_conf 999999609848999944 No 377 >COG1908 FrhD Coenzyme F420-reducing hydrogenase, delta subunit [Energy production and conversion] Probab=74.83 E-value=6.5 Score=19.23 Aligned_cols=87 Identities=21% Similarity=0.244 Sum_probs=58.5 Q ss_pred EECCCHHEECC-EEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCE-EEEEHHHHHHHHHHHHHCC----C- Q ss_conf 40420101021-357621577278899999998258838998415667765674-6754657789999998505----8- Q gi|254780622|r 198 TSGPTYEPLDP-MRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNV-MTIHVERAEDMLQEVLKAL----P- 270 (405) Q Consensus 198 TaG~T~E~ID~-VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~-~~i~v~t~~em~~~~~~~~----~- 270 (405) ++|-++-.--| ||.|--.-||+---.....|++.|||=.++.|=.- ..=++. -..+.+.-.|..+++++++ + T Consensus 18 lag~~rmqyp~~vRiIrv~CsGrvn~~fvl~Al~~GaDGV~v~GC~~-geCHy~~GN~ka~rR~~~lke~l~elgie~eR 96 (132) T COG1908 18 LAGTSRMQYPPNVRIIRVMCSGRVNPEFVLKALRKGADGVLVAGCKI-GECHYISGNYKAKRRMELLKELLKELGIEPER 96 (132) T ss_pred HHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCC-CCEEEECCCHHHHHHHHHHHHHHHHHCCCCCE T ss_conf 21335564898437999632674189999999973898689934415-61233016647999999999999994888442 Q ss_pred CCEEEEEHHHHHHHH Q ss_conf 887997404444432 Q gi|254780622|r 271 VDIAVMVSAVSDWRF 285 (405) Q Consensus 271 ~D~~I~aAAVSDf~~ 285 (405) .+.+.++||=.|=-. T Consensus 97 v~~~wiSa~E~ekf~ 111 (132) T COG1908 97 VRVLWISAAEGEKFA 111 (132) T ss_pred EEEEEEEHHHHHHHH T ss_conf 789997233688899 No 378 >TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ; InterPro: IPR013364 Proteins in this entry are predicted ATPases associated with plasmid transfer loci in bacteria. This family is most similar to the DotB ATPase (IPR013363 from INTERPRO) of a type-IV secretion-like system of the obligate intracellular pathogens Legionella pneumophila and Coxiella burnetii.. Probab=74.53 E-value=3.7 Score=20.81 Aligned_cols=41 Identities=24% Similarity=0.462 Sum_probs=27.9 Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECC Q ss_conf 03223334345589999999863101320017977898404201010213576215 Q gi|254780622|r 160 SNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANR 215 (405) Q Consensus 160 c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~ 215 (405) ||++|.|| ..+++.+-++...+.+ +.||+ |.| |||=||=|. T Consensus 155 CG~TGSGK----STl~AaiY~~~l~t~p----dRKiv-----T~E--DPvEY~L~~ 195 (374) T TIGR02525 155 CGETGSGK----STLAAAIYRHCLETYP----DRKIV-----TYE--DPVEYILGS 195 (374) T ss_pred CCCCCCCH----HHHHHHHHHHHCCCCC----CCEEE-----EEE--CCEEEECCC T ss_conf 17789728----9999999998507488----97079-----865--772123188 No 379 >COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane] Probab=74.12 E-value=6.8 Score=19.12 Aligned_cols=182 Identities=18% Similarity=0.144 Sum_probs=103.3 Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE Q ss_conf 68984056600000388999999986400013465212553103223334345589999999863101320017977898 Q gi|254780622|r 118 PVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALV 197 (405) Q Consensus 118 pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlI 197 (405) |-++-|.-...--+-.+++++++.|.+.|+.=+-+ ||..|.+-...+++-..-++..... .+.|+-| T Consensus 10 ~a~vTPF~~dg~vD~~a~~~lv~~li~~Gv~gi~~-------~GttGE~~~Ls~eEr~~v~~~~v~~------~~grvpv 76 (299) T COG0329 10 PALVTPFDEDGSVDEEALRRLVEFLIAAGVDGLVV-------LGTTGESPTLTLEERKEVLEAVVEA------VGGRVPV 76 (299) T ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CCCCCCCHHCCHHHHHHHHHHHHHH------HCCCCCE T ss_conf 12038998999839999999999999849988997-------9866572216999999999999999------6897778 Q ss_pred EECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEE Q ss_conf 40420101021357621577278899999998258838998415667765674675465778999999850588879974 Q gi|254780622|r 198 TSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMV 277 (405) Q Consensus 198 TaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~a 277 (405) .+|... .|=+--.++|+.+...|++-.++..|-...++ -+..-+-+.++.+..+..+++ T Consensus 77 iaG~g~------------~~t~eai~lak~a~~~Gad~il~v~PyY~k~~-------~~gl~~hf~~ia~a~~lPvil-- 135 (299) T COG0329 77 IAGVGS------------NSTAEAIELAKHAEKLGADGILVVPPYYNKPS-------QEGLYAHFKAIAEAVDLPVIL-- 135 (299) T ss_pred EEECCC------------CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCC-------HHHHHHHHHHHHHHCCCCEEE-- T ss_conf 986287------------77999999999999709999998489788989-------799999999999851899899-- Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 04444432222101123345577510455218068988762148995899981141238999999999749989999205 Q gi|254780622|r 278 SAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCI 357 (405) Q Consensus 278 AAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i 357 (405) |-.+.. ... .-+|+.+..+.+ ..-+||+|-.++++....+-......-|+++.+.- T Consensus 136 -----YN~P~~--------tg~-------~l~~e~i~~la~----~~nivgiKd~~gd~~~~~~~~~~~~~~~f~v~~G~ 191 (299) T COG0329 136 -----YNIPSR--------TGV-------DLSPETIARLAE----HPNIVGVKDSSGDLDRLEEIIAALGDRDFIVLSGD 191 (299) T ss_pred -----EECCCC--------CCC-------CCCHHHHHHHHC----CCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECC T ss_conf -----978752--------489-------999999999827----89889998478899999999986487662898266 No 380 >cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases. Probab=74.09 E-value=6.8 Score=19.11 Aligned_cols=156 Identities=19% Similarity=0.123 Sum_probs=89.9 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCE Q ss_conf 00388999999986400013465212553103223334345589999999863101320017977898404201010213 Q gi|254780622|r 130 WAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPM 209 (405) Q Consensus 130 ~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~V 209 (405) -+....+++++.|...|+.=+-+ ||..|.+-....++=...+....... .| ++-|-+|.+.. T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~~-------~GttGE~~~Ls~~Er~~v~~~~~e~~-----~g-r~pvi~G~~~~----- 87 (309) T cd00952 26 VDLDETARLVERLIAAGVDGILT-------MGTFGECATLTWEEKQAFVATVVETV-----AG-RVPVFVGATTL----- 87 (309) T ss_pred CCHHHHHHHHHHHHHCCCCEEEE-------CCCCCHHHHCCHHHHHHHHHHHHHHH-----CC-CCEEEECCCCC----- T ss_conf 37999999999999769998997-------92350043487999999999999983-----89-85099605750----- Q ss_pred EEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCC-CCCEEEEEHHHHHHHHHHH Q ss_conf 576215772788999999982588389984156677656746754657789999998505-8887997404444432222 Q gi|254780622|r 210 RYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKAL-PVDIAVMVSAVSDWRFPKI 288 (405) Q Consensus 210 R~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~-~~D~~I~aAAVSDf~~~~~ 288 (405) |=+.-.++++.+...||+-.++.-|... + ..-+...+.++++-+.. +.-+++ |-.+.. T Consensus 88 -------~t~~ai~~a~~a~~~Gad~~lv~~P~y~------~-~~~~~l~~~~~~ia~a~~~lPiil-------Yn~P~~ 146 (309) T cd00952 88 -------NTRDTIARTRALLDLGADGTMLGRPMWL------P-LDVDTAVQFYRDVAEAVPEMAIAI-------YANPEA 146 (309) T ss_pred -------HHHHHHHHHHHHHHCCCCEEEECCCCCC------C-CCHHHHHHHHHHHHHHCCCCCEEE-------EECCCC T ss_conf -------5999999999998469899998888588------9-999999999999998678998899-------968640 Q ss_pred HHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHH Q ss_conf 10112334557751045521806898876214899589998114123899999999 Q gi|254780622|r 289 AGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKL 344 (405) Q Consensus 289 ~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl 344 (405) .. .. -.|+.+..|.+ .| -+||+| |+.+....+..-. T Consensus 147 --------tg-----~~--l~~~~~~~La~--~p--nivgvK-~s~~~~~~~~~~~ 182 (309) T cd00952 147 --------FK-----FD--FPRAAWAELAQ--IP--QVVAAK-YLGDIGALLSDLA 182 (309) T ss_pred --------CC-----CC--CCHHHHHHHHC--CC--CEEEEE-ECCCCHHHHHHHH T ss_conf --------01-----57--89999999955--99--989999-3788367999999 No 381 >PRK12831 putative oxidoreductase; Provisional Probab=74.09 E-value=6.8 Score=19.11 Aligned_cols=42 Identities=24% Similarity=0.273 Sum_probs=32.0 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC Q ss_conf 17977898404201010213576215772788999999982588389984156677656 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPP 248 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~ 248 (405) ..||+|+|-+||- ++.-.|..+.+.||+|++++-.....-|. T Consensus 279 ~~Gk~VvVIGGGn-----------------tA~D~arta~R~GaeV~ivyrr~~~~mpa 320 (464) T PRK12831 279 KVGKKVAVVGGGN-----------------VAMDAARTALRLGAEVHIVYRRSEEELPA 320 (464) T ss_pred CCCCEEEEECCCH-----------------HHHHHHHHHHHCCCEEEEECCCCCCCCCC T ss_conf 2587789988855-----------------68999998874297799970457213898 No 382 >PRK06526 transposase; Provisional Probab=73.91 E-value=4.2 Score=20.45 Aligned_cols=31 Identities=16% Similarity=0.314 Sum_probs=23.7 Q ss_pred EEECCCCCHHHHHH--HHHHHHCCCCEEEEECC Q ss_conf 76215772788999--99998258838998415 Q gi|254780622|r 211 YIANRSSGQQGHAI--AKSLAYFGAEVILISGP 241 (405) Q Consensus 211 ~ItN~SSGk~G~~i--A~~~~~~Ga~V~li~g~ 241 (405) ++.+..+||+-.+. +.++..+|+.|.++..+ T Consensus 103 l~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~ 135 (254) T PRK06526 103 FLGPPGTGKTHLAIGLGIRACQAGHRVLFATAA 135 (254) T ss_pred EECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHH T ss_conf 989999868999999999999869967998779 No 383 >pfam00201 UDPGT UDP-glucoronosyl and UDP-glucosyl transferase. Probab=73.78 E-value=6.9 Score=19.06 Aligned_cols=36 Identities=25% Similarity=0.257 Sum_probs=23.0 Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 5569999528478999999999999879889998585 Q gi|254780622|r 5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) ||=+++-..||= ..=.-.+.++|.++|++|.++.+. T Consensus 1 ~kVLVfP~~gSH-~~~~~~l~~~La~RGH~VTvl~p~ 36 (501) T pfam00201 1 GKVLVWPMDGSH-WMNMKGILLELVQRGHEVTVLRPS 36 (501) T ss_pred CCEEEECCCCCH-HHHHHHHHHHHHHCCCEEEEEEEE T ss_conf 958998499984-999999999999889929999713 No 384 >KOG1429 consensus Probab=73.73 E-value=6.4 Score=19.29 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=21.2 Q ss_pred CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 885569999528478999999999999879889998 Q gi|254780622|r 3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPV 38 (405) Q Consensus 3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv 38 (405) +.++||++-=.|+. =.-+|++.|...|++|-++ T Consensus 25 ~~~lrI~itGgaGF---IgSHLvdkLm~egh~Via~ 57 (350) T KOG1429 25 SQNLRILITGGAGF---IGSHLVDKLMTEGHEVIAL 57 (350) T ss_pred CCCEEEEEECCCCH---HHHHHHHHHHHCCCEEEEE T ss_conf 88707999657405---8899999997468779998 No 385 >pfam05025 RbsD_FucU RbsD / FucU transport protein family. The Escherichia coli high-affinity ribose-transport system consists of six proteins encoded by the rbs operon (rbsD, rbsA, rbsC, rbsB, rbsK and rbsR). Of the six components, RbsD is the only one whose function is unknown although it is thought that it somehow plays a critical role in PtsG-mediated ribose transport. This family also includes FucU a protein from the fucose biosynthesis operon that is presumably also involved in fucose transport by similarity to RbsD. Probab=73.43 E-value=7 Score=19.01 Aligned_cols=67 Identities=21% Similarity=0.255 Sum_probs=52.4 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEE------HHHHHHHHHHHHHCCCCCEEEEEHHHHHH Q ss_conf 72788999999982588389984156677656746754------65778999999850588879974044444 Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIH------VERAEDMLQEVLKALPVDIAVMVSAVSDW 283 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~------v~t~~em~~~~~~~~~~D~~I~aAAVSDf 283 (405) +|-..-.|...+...||-=.++-+-.+.+.|++.+.+. .-++.|.++++++.++.|-++.+....+. T Consensus 4 ~~iLnp~Ll~~La~mGHgD~ivI~Da~fP~~~~~~~idL~l~~g~~~~~~vl~aIL~~~pld~~v~a~~~~~~ 76 (137) T pfam05025 4 TPLLNPELLAVLAAMGHGDEIVIADAGLPIPSGVKRIDLALRPGGPSFLDVLEAVLSEMPVEKAVLAEEIKMQ 76 (137) T ss_pred CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEECHHHCCC T ss_conf 5767999999999769999899916999888887606589837999989999999974775426856233047 No 386 >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] Probab=73.20 E-value=7.1 Score=18.98 Aligned_cols=199 Identities=20% Similarity=0.168 Sum_probs=86.6 Q ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHH-----HHCCHH---HHHHHHCCCCCCC-CC-CCCCCCCCCCC Q ss_conf 69999528478999999999999879889998585686-----306989---9999747975820-76-78877877430 Q gi|254780622|r 7 KIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQ-----KFITPL---IVGAISNRRVYTH-LL-SYKEGYESNHI 76 (405) Q Consensus 7 ~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~-----~fi~~~---~l~~lt~~~v~~~-~~-~~~~~~~~~Hi 76 (405) ||-+.=||=+ ..-..-.|-+.|++|.++=-...+ +-+.|. -|+.+-.+..-.. +. ..+.. T Consensus 2 kI~viGtGYV----GLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~------ 71 (414) T COG1004 2 KITVIGTGYV----GLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYE------ 71 (414) T ss_pred CEEEECCCHH----HHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEECCHH------ T ss_conf 1589888556----887899998709848999578899999867999976705899998462357279874788------ Q ss_pred CCCCCCCEEEEEECCHHHHHHHHCCCCCCH-HHHHH---HHCC-CCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC---- Q ss_conf 011446557884111888988520245521-46667---5227-99689840566000003889999999864000---- Q gi|254780622|r 77 QLANECDLLVVAPASANFIAHVAHGMVYDL-ASAIL---LAKG-DQPVLIAPAMNFMMWAKPATQRNVEILQKDGC---- 147 (405) Q Consensus 77 ~l~~~aD~~iVaPaTaNtiaK~A~GiaD~l-lt~~~---la~~-~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~---- 147 (405) +-.+.+|+..||=-|- .+- .|-+|.- +-+++ .... +..++|.-+--+ |-|.+++++.-.... T Consensus 72 ~a~~~adv~fIavgTP---~~~-dg~aDl~~V~ava~~i~~~~~~~~vvV~KSTVP-----vGt~~~v~~~i~~~~~~~~ 142 (414) T COG1004 72 EAVKDADVVFIAVGTP---PDE-DGSADLSYVEAVAKDIGEILDGKAVVVIKSTVP-----VGTTEEVRAKIREENSGKD 142 (414) T ss_pred HHHHCCCEEEEECCCC---CCC-CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC-----CCCHHHHHHHHHHHCCCCC T ss_conf 8962597799974899---998-897328999999999986267873999848879-----8846999999986346777 Q ss_pred --CCCCCCHHHHHHCCCCCCC-------------CCCC-HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEE Q ss_conf --1346521255310322333-------------4345-58999999986310132001797789840420101021357 Q gi|254780622|r 148 --YFIGPESGAMAESNGYGVG-------------RMSE-PCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRY 211 (405) Q Consensus 148 --~vi~P~~g~la~c~~~G~g-------------rl~e-~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ 211 (405) .+..|+. | .||.+ ---+ ..+++.++-.-+.. ++-.+|+|.=.|.|-|- | T Consensus 143 f~v~~NPEF--L----REG~Av~D~~~PdRIViG~~~~~a~~~~~ely~~~~~------~~~p~l~t~~~~AE~IK---y 207 (414) T COG1004 143 FEVASNPEF--L----REGSAVYDFLYPDRIVIGVRSERAAAVLRELYAPFLR------QDVPILFTDLREAELIK---Y 207 (414) T ss_pred CEEECCHHH--H----CCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHH------CCCCEEEECCHHHHHHH---H T ss_conf 507618678--4----4752344315898389925771689999999753420------49988995602999999---9 Q ss_pred EECCCCC-H--HHHHHHHHHHHCCCCEEEEE Q ss_conf 6215772-7--88999999982588389984 Q gi|254780622|r 212 IANRSSG-Q--QGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 212 ItN~SSG-k--~G~~iA~~~~~~Ga~V~li~ 239 (405) -+|..=- | .=-+||..|-..|+++.-|. T Consensus 208 aaNafLAtKIsFiNEia~ice~~g~D~~~V~ 238 (414) T COG1004 208 AANAFLATKISFINEIANICEKVGADVKQVA 238 (414) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH T ss_conf 9889999999999999999999698999999 No 387 >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog Probab=73.19 E-value=7.1 Score=18.97 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=26.7 Q ss_pred EEEEEE------ECHHHHHHHHHHHHHHHHCCCEEEEEECHHH Q ss_conf 699995------2847899999999999987988999858568 Q gi|254780622|r 7 KIALIM------CGSVAVYKSLDLIRRLRERGAVVIPVMTKSA 43 (405) Q Consensus 7 ~Illgv------tGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A 43 (405) ||++.. .||+..+ +.+|++.|.++|++|.|+-+... T Consensus 1 kIl~i~~~f~P~~GG~e~~-~~~la~~L~~~Gh~V~v~t~~~~ 42 (364) T cd03814 1 RIAIVTDTFLPQVNGVVRT-LQRLVEHLRARGHEVLVIAPGPF 42 (364) T ss_pred CEEEEECCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEECCCC T ss_conf 9899938889998849999-99999999977998999978997 No 388 >PRK12409 D-amino acid dehydrogenase small subunit; Provisional Probab=72.57 E-value=4.1 Score=20.50 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=15.3 Q ss_pred CHHHHHHHHHHHHCCCCE Q ss_conf 278899999998258838 Q gi|254780622|r 218 GQQGHAIAKSLAYFGAEV 235 (405) Q Consensus 218 Gk~G~~iA~~~~~~Ga~V 235 (405) .+.-.++++++.++|.+. T Consensus 197 ~~~~~al~~~~~~~G~~~ 214 (410) T PRK12409 197 HKFTTGLAAACARLGVQF 214 (410) T ss_pred HHHHHHHHHHHHHCCCEE T ss_conf 999999999999779999 No 389 >PRK05599 hypothetical protein; Provisional Probab=72.33 E-value=7.5 Score=18.85 Aligned_cols=68 Identities=16% Similarity=0.274 Sum_probs=36.5 Q ss_pred ECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC--------C--CCCCEEEE-----EHHHHHHHHHHHHHCC-CCCEEEE Q ss_conf 21577278899999998258838998415667--------7--65674675-----4657789999998505-8887997 Q gi|254780622|r 213 ANRSSGQQGHAIAKSLAYFGAEVILISGPVSI--------A--DPPNVMTI-----HVERAEDMLQEVLKAL-PVDIAVM 276 (405) Q Consensus 213 tN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~--------~--~~~~~~~i-----~v~t~~em~~~~~~~~-~~D~~I~ 276 (405) |--|||- |.++|+.+. +|++|.++...... . ....+..+ ..++.+++.+++.+.. +.|++|. T Consensus 6 TGASsGI-G~a~A~~lA-~G~~vvl~~R~~e~l~~l~~~l~~~g~~~v~~~~~Dvtd~~~~~~~v~~~~~~~g~id~lv~ 83 (246) T PRK05599 6 LGGTSDI-AGEIATLLA-HGEDVVLAARRPEAAGGLAEDLRQLGATSVHVLSFDATDLDSHRELVKQTQELAGEISLAVV 83 (246) T ss_pred ECCCHHH-HHHHHHHHH-CCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 8886899-999999998-59949999999999999999998625971899728999999999999999986198439998 Q ss_pred EHHHHH Q ss_conf 404444 Q gi|254780622|r 277 VSAVSD 282 (405) Q Consensus 277 aAAVSD 282 (405) +|.+.. T Consensus 84 naGi~~ 89 (246) T PRK05599 84 AFGILG 89 (246) T ss_pred CCCCCC T ss_conf 776678 No 390 >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Probab=72.21 E-value=7.5 Score=18.83 Aligned_cols=70 Identities=16% Similarity=0.246 Sum_probs=34.2 Q ss_pred CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 88556999952847899999999999987988999858568630698999997479758207678877877430011446 Q gi|254780622|r 3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANEC 82 (405) Q Consensus 3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~a 82 (405) |+||=+++|...|- .-.+|.|.+.|++|.+.=.+.+.. ...++.+ +.+.+. ... . -+.-..+ T Consensus 16 l~~kvlV~GlG~SG-----~s~a~~L~~~G~~v~~~D~~~~~~---~~~~~~~-~~~~~~---~~~---~---~~~~~~~ 77 (476) T PRK00141 16 LRGRVLVAGAGVSG-----LGIAKMLSELGCDVVVADDNETQR---HMLIEVV-DVADIS---TAQ---A---SDALDSY 77 (476) T ss_pred HCCCEEEEEECHHH-----HHHHHHHHHCCCEEEEEECCCCHH---HHHHHHC-CCCEEC---CCC---H---HHHHCCC T ss_conf 69988999227889-----999999997899799998998703---5788747-985651---553---0---6564689 Q ss_pred CEEEEEEC Q ss_conf 55788411 Q gi|254780622|r 83 DLLVVAPA 90 (405) Q Consensus 83 D~~iVaPa 90 (405) |++|+.|. T Consensus 78 d~vV~SPG 85 (476) T PRK00141 78 SIVVTSPG 85 (476) T ss_pred CEEEECCC T ss_conf 99998997 No 391 >PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional Probab=72.10 E-value=3.4 Score=21.00 Aligned_cols=88 Identities=15% Similarity=0.220 Sum_probs=50.0 Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH--EE----CCEE Q ss_conf 99999864000134652125531032233343455899999998631013200179778984042010--10----2135 Q gi|254780622|r 137 RNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE--PL----DPMR 210 (405) Q Consensus 137 ~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E--~I----D~VR 210 (405) .+...+...|+.++ .|.+|+.++..+.-. .......+..++++|-.|.+.- +| |.=+ T Consensus 81 ~~~~~~~~~gv~~~------------~g~a~~~~~~~v~V~-----~~~~~~~~~a~~iIIATGs~p~~l~ipG~~d~~~ 143 (438) T PRK07251 81 KNYAMLAGTGVDIY------------DAEAHFVSNKVIEVT-----AGDEKQELTAETIVINTGAVSNVLPIPGLADSKH 143 (438) T ss_pred HHHHHHHHCCCEEE------------EEEEEECCCCEEEEE-----CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCE T ss_conf 99999974894899------------979998168489995-----5997299997689872678786699886568756 Q ss_pred EEEC---------------CCCCHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 7621---------------577278899999998258838998415 Q gi|254780622|r 211 YIAN---------------RSSGQQGHAIAKSLAYFGAEVILISGP 241 (405) Q Consensus 211 ~ItN---------------~SSGk~G~~iA~~~~~~Ga~V~li~g~ 241 (405) .+++ --.|-.|.++|..+...|.+||+|... T Consensus 144 v~~s~~~~~l~~~p~~v~ViGgG~ig~E~A~~~~~lG~~Vtli~~~ 189 (438) T PRK07251 144 VYDSTGIQNLEKLPKRLGILGGGNIGLEFAGLYNKLGSKVTVLDAA 189 (438) T ss_pred EEECHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEC T ss_conf 9801787646537976999888645889999998348768999846 No 392 >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional Probab=71.90 E-value=7.6 Score=18.78 Aligned_cols=138 Identities=18% Similarity=0.187 Sum_probs=60.7 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCC---CCCCCEEE----EEHHHHHHHHH Q ss_conf 797789840420101021357621577278899999998258838998415667---76567467----54657789999 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSI---ADPPNVMT----IHVERAEDMLQ 263 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~---~~~~~~~~----i~v~t~~em~~ 263 (405) ..++|+|-+| +|+||...++.+...|+.|..+--..-. ....+..+ +++..+.+..+ T Consensus 97 ~~~~i~IIGG----------------~G~mG~~F~~~f~~sGy~V~ild~~dw~~~~~~~~~advViVsVPI~~T~~VI~ 160 (374) T PRK11199 97 DLRPVVIVGG----------------KGQLGRLFAKMLTLSGYQVRILEKDDWDRADDILADAGMVIVSVPIHLTEEVIE 160 (374) T ss_pred CCCEEEEEEC----------------CCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCEEEEEECHHHHHHHHH T ss_conf 9871799807----------------982779999999967987996164445348988717998999814588999998 Q ss_pred HHHHCCCCCEEEEEHHHHHHHHHHHHH-CCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHH Q ss_conf 998505888799740444443222210-1123345577510455218068988762148995899981141238999999 Q gi|254780622|r 264 EVLKALPVDIAVMVSAVSDWRFPKIAG-TKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNARE 342 (405) Q Consensus 264 ~~~~~~~~D~~I~aAAVSDf~~~~~~~-~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~ 342 (405) ++ ..++.|.+++ |.+--+... ....+...+..+-++-.-.||+= ++ ..|.+|-.-....+-.+...+ T Consensus 161 ~l-~~l~~~~lL~-----DiTSvK~~Pl~aMl~~h~gpV~GlHPMFGP~v~-sl-----~~QvVV~c~gr~~e~~~wl~~ 228 (374) T PRK11199 161 KL-PPLPEDCILV-----DLTSVKNGPLQAMLAAHSGPVLGLHPMFGPDVG-SL-----AKQVVVVCDGRQPEAYQWLLE 228 (374) T ss_pred HC-CCCCCCCEEE-----ECHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCC-CC-----CCCEEEECCCCCHHHHHHHHH T ss_conf 57-7899986898-----610042789999998568985022778799964-44-----787699889998377899999 Q ss_pred HHHHCCCCEEEEEC Q ss_conf 99974998999920 Q gi|254780622|r 343 KLLNKGADFIVSNC 356 (405) Q Consensus 343 Kl~~K~~D~IVAN~ 356 (405) .+...|+-++..+. T Consensus 229 ~~~~~Ga~l~~~~~ 242 (374) T PRK11199 229 QIQIWGARLHRISA 242 (374) T ss_pred HHHHHCCEEEECCH T ss_conf 99984878998688 No 393 >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional Probab=71.80 E-value=7.7 Score=18.77 Aligned_cols=74 Identities=15% Similarity=0.213 Sum_probs=50.1 Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCE Q ss_conf 58999999986310132001797789840420101021357621577278899999998258838998415667765674 Q gi|254780622|r 171 PCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNV 250 (405) Q Consensus 171 ~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~ 250 (405) |..|++-+.++ ..+++||+|+|-+- |---|.-+|.-+..+||.||..|..+. T Consensus 143 p~av~~lL~~y-----~i~~~Gk~vvVvGr----------------S~iVGkPla~lL~~~~atVTichs~T~------- 194 (288) T PRK10792 143 PRGIVTLLERY-----NIDTFGLNAVVIGA----------------SNIVGRPMSMELLLAGCTTTVTHRFTK------- 194 (288) T ss_pred HHHHHHHHHHC-----CCCCCCCEEEEECC----------------CCCCCHHHHHHHHHCCCEEEEECCCCC------- T ss_conf 99999999974-----75637888999567----------------663438999999866995986257887------- Q ss_pred EEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHH Q ss_conf 6754657789999998505888799740444443 Q gi|254780622|r 251 MTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWR 284 (405) Q Consensus 251 ~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~ 284 (405) ++.+.+ ..+|++|.|+-+..|- T Consensus 195 ---------nl~~~~---~~ADIvIsA~G~p~~i 216 (288) T PRK10792 195 ---------NLRHHV---ENADLLIVAVGKPGFI 216 (288) T ss_pred ---------CHHHHH---HHCCEEEEECCCCCCC T ss_conf ---------889999---8578976404886756 No 394 >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated Probab=71.69 E-value=5.8 Score=19.57 Aligned_cols=32 Identities=16% Similarity=0.164 Sum_probs=19.2 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 569999528478999999999999879889998585 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) |||.+.=+|-+-+ .++-.+..+|++|.++=.. T Consensus 3 kkV~ViGaG~MG~----~IA~~~a~~G~~V~l~D~~ 34 (289) T PRK09260 3 EKIVVVGAGVMGR----GIAYVFASSGFQTTLVDIS 34 (289) T ss_pred CEEEEECCCHHHH----HHHHHHHHCCCCEEEEECC T ss_conf 7699979688789----9999999689988999799 No 395 >PRK05370 argininosuccinate synthase; Validated Probab=71.65 E-value=7.7 Score=18.75 Aligned_cols=38 Identities=18% Similarity=0.386 Sum_probs=28.3 Q ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHH Q ss_conf 85569999528478999999999999879889998585686 Q gi|254780622|r 4 SGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQ 44 (405) Q Consensus 4 ~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~ 44 (405) .||||+|+-||+.-. --.+.+|+++|++|.++.-.-++ T Consensus 10 ~gkKVvLAYSGGLDT---Sv~l~wL~e~g~eVia~taDvGQ 47 (447) T PRK05370 10 VGQRVGIAFSGGLDT---SAALLWMRQKGAVPYAYTANLGQ 47 (447) T ss_pred CCCEEEEEECCCCHH---HHHHHHHHHCCCEEEEEEEECCC T ss_conf 888899995898279---99999998759879999997999 No 396 >COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] Probab=71.39 E-value=7.8 Score=18.71 Aligned_cols=182 Identities=25% Similarity=0.258 Sum_probs=101.4 Q ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCC--HHHHHHH---HCCCCCCCCCCCCC------- Q ss_conf 88855699995284789999999999998798899985856863069--8999997---47975820767887------- Q gi|254780622|r 2 DLSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFIT--PLIVGAI---SNRRVYTHLLSYKE------- 69 (405) Q Consensus 2 ~l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~--~~~l~~l---t~~~v~~~~~~~~~------- 69 (405) +|+|-||.-++-= .+|+.-|+..|+..|++|+..-. +..+ +..-+++ .|-||+-.--...+ T Consensus 42 PlkG~~i~~~lH~---t~kTAvLietL~a~GAeV~~a~c----NplSTqD~vaaAl~~~~GipVfA~kGe~~eeY~~~~~ 114 (420) T COG0499 42 PLKGARIAGCLHM---TAKTAVLIETLKAGGAEVRWASC----NPLSTQDDVAAALAAKEGIPVFAWKGETLEEYYEAID 114 (420) T ss_pred CCCCCEEEEEEEE---HHHHHHHHHHHHHCCCEEEEECC----CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH T ss_conf 9776578998731---58799999999855856998527----8876667899998750596179970787899999999 Q ss_pred --CCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHH--HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH Q ss_conf --787743001144655788411188898852024552146667--5227996898405660000038899999998640 Q gi|254780622|r 70 --GYESNHIQLANECDLLVVAPASANFIAHVAHGMVYDLASAIL--LAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKD 145 (405) Q Consensus 70 --~~~~~Hi~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~--la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~ 145 (405) ....+.|-+-.=+|+..+.--..-.+..--.|.+.---|.+. .+-.+.-++-+|++|-+ ++ .|+ T Consensus 115 ~vl~~~p~iiiDDG~D~~~~vh~~~~~l~~~i~G~tEETTTGV~RL~am~~~G~L~fPai~VN--Ds-~tK--------- 182 (420) T COG0499 115 QVLDWEPNIIIDDGGDLTKLVHLERPELLDAIKGGTEETTTGVHRLRAMEKDGVLKFPAINVN--DS-VTK--------- 182 (420) T ss_pred HHHCCCCCEEEECCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEC--CH-HHH--------- T ss_conf 995659987982473202100005487887742877534228999998976697323558604--34-441--------- Q ss_pred CCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHH Q ss_conf 00134652125531032233343455899999998631013200179778984042010102135762157727889999 Q gi|254780622|r 146 GCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIA 225 (405) Q Consensus 146 g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA 225 (405) +.| =+.+|.| +..++.+.+.. ...+.||.++|-+ =|--|.-+| T Consensus 183 -~~F----------DNrYGtg-----qS~~DgI~RaT----n~liaGK~vVV~G-----------------YG~vGrG~A 225 (420) T COG0499 183 -SLF----------DNRYGTG-----QSLLDGILRAT----NVLLAGKNVVVAG-----------------YGWVGRGIA 225 (420) T ss_pred -CCC----------CCCCCCC-----HHHHHHHHHHH----CEEECCCEEEEEC-----------------CCCCCHHHH T ss_conf -314----------5665641-----24899998642----0011486699963-----------------564436699 Q ss_pred HHHHHCCCCEEEEE Q ss_conf 99982588389984 Q gi|254780622|r 226 KSLAYFGAEVILIS 239 (405) Q Consensus 226 ~~~~~~Ga~V~li~ 239 (405) ..+.-.||+|..-- T Consensus 226 ~~~rg~GA~ViVtE 239 (420) T COG0499 226 MRLRGMGARVIVTE 239 (420) T ss_pred HHHHCCCCEEEEEE T ss_conf 98622898699982 No 397 >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] Probab=71.36 E-value=7.8 Score=18.71 Aligned_cols=115 Identities=14% Similarity=0.106 Sum_probs=46.5 Q ss_pred HHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCC--CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHH Q ss_conf 99999999998798899985856863069899999747975--8207678877877430011446557884111888988 Q gi|254780622|r 20 KSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRV--YTHLLSYKEGYESNHIQLANECDLLVVAPASANFIAH 97 (405) Q Consensus 20 k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v--~~~~~~~~~~~~~~Hi~l~~~aD~~iVaPaTaNtiaK 97 (405) .+.-|.+.|.+.-..+++ +... ++..+-.-|+.-.+. .++.++.--. | ....|.|+.|-| T Consensus 16 QaiaLa~~l~r~eyttk~-l~~~---~l~~lP~~wl~~yp~~~~~~l~~~~~~----r-~p~~~Pdl~I~a--------- 77 (329) T COG3660 16 QAIALAEQLTRSEYTTKL-LEYN---NLAKLPNFWLAYYPIHILRELFGPRLS----R-KPEQRPDLIITA--------- 77 (329) T ss_pred HHHHHHHHHHCCCEEEEE-EECC---CCCCCCHHHHHCCCCHHHHHHHCCCCC----C-CCCCCCCEEEEC--------- T ss_conf 999999986046437899-5122---001274466512762767876367000----1-755798558861--------- Q ss_pred HHCCCCCCHHHHHHHHCCCCCEEE---ECCCCCHHHHHHHHH--HHHHHHHHHCCCCCCCCHHH Q ss_conf 520245521466675227996898---405660000038899--99999864000134652125 Q gi|254780622|r 98 VAHGMVYDLASAILLAKGDQPVLI---APAMNFMMWAKPATQ--RNVEILQKDGCYFIGPESGA 156 (405) Q Consensus 98 ~A~GiaD~llt~~~la~~~~pi~i---aPaMn~~M~~~p~~~--~nl~~L~~~g~~vi~P~~g~ 156 (405) |..--+++--+-...+.+.+| -|....+||+--++- +.++.+...|..+ -|..|. T Consensus 78 ---Grrta~l~~~lkk~~~~~~vVqI~~Prlp~~~fDlvivp~HD~~~~~s~~~~Ni-lpi~Gs 137 (329) T COG3660 78 ---GRRTAPLAFYLKKKFGGIKVVQIQDPRLPYNHFDLVIVPYHDWREELSDQGPNI-LPINGS 137 (329) T ss_pred ---CCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHCCCCCE-EECCCC T ss_conf ---521007899999861895389950799985302178426024666531157845-542688 No 398 >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated Probab=71.26 E-value=6 Score=19.46 Aligned_cols=31 Identities=23% Similarity=0.193 Sum_probs=18.5 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 56999952847899999999999987988999858 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT 40 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T 40 (405) |+|.+.=+|-|-+- ++-.+-.+|++|.++=. T Consensus 8 k~VaVIGaG~MG~g----iAa~~a~~G~~V~l~D~ 38 (321) T PRK07066 8 KTFAAIGSGVIGSG----WVARALAHGLDVVAWDP 38 (321) T ss_pred CEEEEECCCHHHHH----HHHHHHHCCCEEEEEEC T ss_conf 87999888788899----99999947985999969 No 399 >PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed Probab=71.15 E-value=7.9 Score=18.68 Aligned_cols=22 Identities=32% Similarity=0.388 Sum_probs=11.2 Q ss_pred CCHHHHHHHHHHHHCCCCEEEE Q ss_conf 7278899999998258838998 Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVILI 238 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~li 238 (405) ||=-|.+-|..|.++|++||+. T Consensus 335 sGPAGLsaA~~Lar~G~~VTVF 356 (654) T PRK12769 335 AGPAGLACADVLTRNGVAVTVY 356 (654) T ss_pred CCHHHHHHHHHHHHCCCEEEEE T ss_conf 7789999999999769757995 No 400 >pfam01121 CoaE Dephospho-CoA kinase. This family catalyses the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form Coenzyme A EC:2.7.1.24. This enzyme uses ATP in its reaction. Probab=71.08 E-value=2.9 Score=21.47 Aligned_cols=27 Identities=15% Similarity=0.194 Sum_probs=18.0 Q ss_pred EEEEEECHHHHHHHHHHHHHHHHCCCEE Q ss_conf 9999528478999999999999879889 Q gi|254780622|r 8 IALIMCGSVAVYKSLDLIRRLRERGAVV 35 (405) Q Consensus 8 IllgvtGsiaa~k~~~l~~~L~~~g~~V 35 (405) +++|+||+|++-|+.- .+.|++.|+.| T Consensus 1 ~iIgiTG~IgsGKStv-~~~l~~~G~~v 27 (179) T pfam01121 1 LIVGLTGGIGSGKSTV-ANLFADLGVPI 27 (179) T ss_pred CEEEEECCCCCCHHHH-HHHHHHCCCCE T ss_conf 9899857864789999-99999879919 No 401 >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Probab=71.04 E-value=4.5 Score=20.29 Aligned_cols=178 Identities=20% Similarity=0.235 Sum_probs=87.7 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHH--HHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 569999528478999999999999879889998585686--306989999974797582076788778774300114465 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQ--KFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECD 83 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~--~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD 83 (405) +++++.=.|-+ ...+++.|.+.|++|.+|-..... +|... ..-.+-+..+-++..... -.. ...+| T Consensus 1 m~iiIiG~G~v----G~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~---~ag-i~~aD 68 (225) T COG0569 1 MKIIIIGAGRV----GRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLE---EAG-IDDAD 68 (225) T ss_pred CEEEEECCCHH----HHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----CCCEEEEEECCCCHHHHH---HCC-CCCCC T ss_conf 98999898578----8999999987899089997688999986320----004499992688989998---679-86389 Q ss_pred EEEEEECCHHHHHHHHCCCCCCHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHHHHCC Q ss_conf 5788411188898852024552146667522-79968984056600000388999999986400-013465212553103 Q gi|254780622|r 84 LLVVAPASANFIAHVAHGMVYDLASAILLAK-GDQPVLIAPAMNFMMWAKPATQRNVEILQKDG-CYFIGPESGAMAESN 161 (405) Q Consensus 84 ~~iVaPaTaNtiaK~A~GiaD~llt~~~la~-~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g-~~vi~P~~g~la~c~ 161 (405) +++++=-.-.+ |++.+++... .+.|-++|=+ .+|. +.+.|++.| -.++.|+. T Consensus 69 ~vva~t~~d~~----------N~i~~~la~~~~gv~~viar~------~~~~---~~~~~~~~g~~~ii~Pe~------- 122 (225) T COG0569 69 AVVAATGNDEV----------NSVLALLALKEFGVPRVIARA------RNPE---HEKVLEKLGADVIISPEK------- 122 (225) T ss_pred EEEEEECCCHH----------HHHHHHHHHHHCCCCEEEEEE------CCCH---HHHHHHHCCCCEEECHHH------- T ss_conf 99998088679----------999999999873998499995------6941---677898679948975589------- Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 2233343455899999998631013200179778984042010102135762157727889999999825883899841 Q gi|254780622|r 162 GYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 162 ~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) ..-..+.+.+..+.- ..++-.+++ ...-+...-...+---|..|.+...+...++.++.. T Consensus 123 -----------~~~~~l~~~i~~p~~-----~~~~~~~~~---~~~~~~~~v~~~~~~~g~~L~el~~~~~~~~~vvai 182 (225) T COG0569 123 -----------LAAKRLARLIVTPGA-----LDVLELAGG---DAEVIEEKVAEDSPLAGKTLRELDLRLPYDVNVIAI 182 (225) T ss_pred -----------HHHHHHHHHHCCCCH-----HEEEECCCC---CCEEEEEEECCCCCCCCCCHHHHCCCCCCCCEEEEE T ss_conf -----------999999998538863-----103442699---723899993589825775989932546788289999 No 402 >cd01134 V_A-ATPase_A V/A-type ATP synthase catalytic subunit A. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria. Probab=70.93 E-value=5.7 Score=19.60 Aligned_cols=27 Identities=26% Similarity=0.298 Sum_probs=22.8 Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCC Q ss_conf 772788999999982588389984156 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFGAEVILISGPV 242 (405) Q Consensus 216 SSGk~G~~iA~~~~~~Ga~V~li~g~~ 242 (405) .|--+|.+||++++.+|.+|-++...+ T Consensus 237 ~s~y~g~tiAEyfRd~G~~Vll~~Dsl 263 (369) T cd01134 237 ASIYTGITIAEYFRDMGYNVALMADST 263 (369) T ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCH T ss_conf 889899999999996898879980758 No 403 >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Probab=70.62 E-value=8.1 Score=18.60 Aligned_cols=35 Identities=26% Similarity=0.293 Sum_probs=26.4 Q ss_pred EEEEEE----------ECHHHHHHHHHHHHHHHHCCCEEEEEECHH Q ss_conf 699995----------284789999999999998798899985856 Q gi|254780622|r 7 KIALIM----------CGSVAVYKSLDLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 7 ~Illgv----------tGsiaa~k~~~l~~~L~~~g~~V~vv~T~~ 42 (405) ||++.. -||+..+ +.+|++.|.+.|++|.++.+.. T Consensus 2 kI~~v~~~~~p~pP~~~GG~e~~-~~~La~~L~~~Gh~V~v~~~~~ 46 (335) T cd03802 2 RIALVAPPREPVPPPAYGGTERV-VAALTEGLVARGHEVTLFASGD 46 (335) T ss_pred EEEEECCCCCCCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEECCC T ss_conf 86998884003699998979999-9999999997699899996289 No 404 >PRK07710 acetolactate synthase catalytic subunit; Reviewed Probab=70.56 E-value=8.2 Score=18.59 Aligned_cols=157 Identities=15% Similarity=0.223 Sum_probs=90.0 Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH--------EECCEEEEECCCCCHHHH----HHHHHHHHCCCCEE Q ss_conf 455899999998631013200179778984042010--------102135762157727889----99999982588389 Q gi|254780622|r 169 SEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE--------PLDPMRYIANRSSGQQGH----AIAKSLAYFGAEVI 236 (405) Q Consensus 169 ~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E--------~ID~VR~ItN~SSGk~G~----~iA~~~~~~Ga~V~ 236 (405) ..|..++..+.+.+ .+..++++-+|+.- .-+|-||++..+.|-||+ +|.-.+...+..|. T Consensus 375 i~p~~~~~~l~~~l--------~~d~iv~~D~G~~~~~~~~~~~~~~~~~~~~~~~~G~mG~glpaAiGA~lA~p~r~Vv 446 (571) T PRK07710 375 IKPQYAIDMLYEIT--------KGEAIVTTDVGQHQMWAAQYYPLKTPDKWVTSGGLGTMGFGLPAAIGAQIAKPDELVV 446 (571) T ss_pred CCHHHHHHHHHHHC--------CCCEEEEECCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCEEE T ss_conf 49999999999867--------9984999658730688886514678962420688776566408999999738998389 Q ss_pred EEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH----HHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHH Q ss_conf 9841566776567467546577899999985058887997404----444432222101123345577510455218068 Q gi|254780622|r 237 LISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA----VSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDI 312 (405) Q Consensus 237 li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA----VSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdI 312 (405) ++.|-.+. --+.+|+..++...++.-++|+.=. +..+.- ...+++. . .-.+..+||. T Consensus 447 ~i~GDG~f----------~m~~qEL~Ta~r~~lpv~ivV~NN~~yg~ir~~q~-~~~~~~~---~-----~~~~~~~pdf 507 (571) T PRK07710 447 AIVGDAGF----------QMTLQELSVLKEHSLPVKVFILNNEALGMVRQWQE-EFYNQRY---S-----HSLLSCQPDF 507 (571) T ss_pred EEECCHHH----------HCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHCCCCC---C-----CCCCCCCCCH T ss_conf 99778056----------43699999999959993899997871489999999-8628877---7-----6667899999 Q ss_pred HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 988762148995899981141238999999999749989999205 Q gi|254780622|r 313 LKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCI 357 (405) Q Consensus 313 L~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i 357 (405) .+ +.+--. +-|+..++.+-++.|.++..+.+-=.+|-=.+ T Consensus 508 ~~-~A~a~G----~~g~~V~~~~el~~Al~~Al~~~gP~lIeV~v 547 (571) T PRK07710 508 VA-LAEAYG----IKGVRIDDPLEAKEQLQHAITLQEPVVIDCRV 547 (571) T ss_pred HH-HHHHCC----CEEEEECCHHHHHHHHHHHHCCCCCEEEEEEE T ss_conf 99-999779----98999799999999999998189969999997 No 405 >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] Probab=70.43 E-value=8.2 Score=18.58 Aligned_cols=14 Identities=36% Similarity=0.394 Sum_probs=6.8 Q ss_pred HHHHHHHHHHHHCC Q ss_conf 89999999864000 Q gi|254780622|r 134 ATQRNVEILQKDGC 147 (405) Q Consensus 134 ~~~~nl~~L~~~g~ 147 (405) .+.+|++...+.|. T Consensus 81 ~~~~~l~~~~~~~~ 94 (266) T COG0289 81 ATLENLEFALEHGK 94 (266) T ss_pred HHHHHHHHHHHCCC T ss_conf 46999999997699 No 406 >TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level HMM (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different. Probab=70.41 E-value=8.2 Score=18.57 Aligned_cols=80 Identities=11% Similarity=0.130 Sum_probs=33.6 Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE----EECCCHHEECCEE---------EEECCCCCHHHHHHHHHHHH Q ss_conf 3334345589999999863101320017977898----4042010102135---------76215772788999999982 Q gi|254780622|r 164 GVGRMSEPCDIIRQITWLLYKSKELLLKGKRALV----TSGPTYEPLDPMR---------YIANRSSGQQGHAIAKSLAY 230 (405) Q Consensus 164 G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlI----TaG~T~E~ID~VR---------~ItN~SSGk~G~~iA~~~~~ 230 (405) ..|+-.++++|-+.+.. .++ =+.|.+ |+-|+.-+++.+. ++---+|.--|.-+- .-. T Consensus 106 ~~g~~~~~~~v~~~l~~----~~~----~~~v~~~h~ETstGv~~~~~~i~~~~~~~~~llvVDavSs~g~~p~d--~~~ 175 (355) T TIGR03301 106 SEYEPPDLNRIEEALAA----DPD----ITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID--IEE 175 (355) T ss_pred CCCCCCCHHHHHHHHHC----CCC----CCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCC--CCC T ss_conf 88778998999999725----778----54899950126787417537665665047964999745643568642--011 Q ss_pred CCCCEEEEECCCCCCCCCCEEEE Q ss_conf 58838998415667765674675 Q gi|254780622|r 231 FGAEVILISGPVSIADPPNVMTI 253 (405) Q Consensus 231 ~Ga~V~li~g~~~~~~~~~~~~i 253 (405) -|.++.+-.+.-.+..|+|+..+ T Consensus 176 ~gvD~~~~~sQK~l~~ppGl~~v 198 (355) T TIGR03301 176 LDVDALIASANKCLEGVPGFGFV 198 (355) T ss_pred CCEEEEEECCCCCCCCCCCEEEE T ss_conf 56589995365556788875788 No 407 >cd00293 USP_Like Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity. Probab=70.36 E-value=8.2 Score=18.57 Aligned_cols=18 Identities=22% Similarity=0.278 Sum_probs=7.0 Q ss_pred EEEEEEECHHHHHHHHHH Q ss_conf 699995284789999999 Q gi|254780622|r 7 KIALIMCGSVAVYKSLDL 24 (405) Q Consensus 7 ~IllgvtGsiaa~k~~~l 24 (405) |||+++.+|-.+.++.+. T Consensus 1 ~Ilv~vd~s~~s~~al~~ 18 (130) T cd00293 1 RILVAVDGSEESERALRW 18 (130) T ss_pred CEEEEECCCHHHHHHHHH T ss_conf 999998989899999999 No 408 >TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family. A family of closely related, thiamine pyrophosphate-dependent enzymes includes indolepyruvate decarboxylase (EC 4.1.1.74), phenylpyruvate decarboxylase (EC 4.1.1.43), pyruvate decarboxylase (EC 4.1.1.1), branched-chain alpha-ketoacid decarboxylase, etc.. Members of this group of homologs may overlap in specificity. This model represents a clade that includes a Azospirillum brasilense member active as both phenylpyruvate decarboxylase and indolepyruvate decarboxylase. Probab=70.33 E-value=8.2 Score=18.56 Aligned_cols=24 Identities=21% Similarity=0.414 Sum_probs=10.6 Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCC Q ss_conf 5569999528478999999999999879 Q gi|254780622|r 5 GKKIALIMCGSVAVYKSLDLIRRLRERG 32 (405) Q Consensus 5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g 32 (405) |-+-++|+.|+- ...+...|.+.| T Consensus 14 GV~~vFGipG~~----~~~~~dal~~~~ 37 (535) T TIGR03394 14 GAQEMFGIPGDF----ALPFFKVIEETG 37 (535) T ss_pred CCCEEEECCCHH----HHHHHHHHHHCC T ss_conf 999999877763----999999998689 No 409 >TIGR01578 MiaB-like-B MiaB-like tRNA modifying enzyme, archaeal-type; InterPro: IPR006466 This clade of sequences is closely related to MiaB, a modifier of isopentenylated adenosine-37 of certain eukaryotic and bacterial tRNAs (see IPR006463 from INTERPRO). Sequence alignments suggest that this family of sequences perform the same chemical transformation as MiaB, perhaps on a different (or differently modified) tRNA base substrate. This clade represents a subfamily that spans the archaea and eukaryotes. The only archaeal miaB-like genes are in this group of sequences , , .. Probab=70.18 E-value=8.3 Score=18.54 Aligned_cols=187 Identities=18% Similarity=0.194 Sum_probs=98.6 Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHCCC------CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEEC Q ss_conf 89999999864000134652125531032------233343455899999998631013200179778984042010102 Q gi|254780622|r 134 ATQRNVEILQKDGCYFIGPESGAMAESNG------YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLD 207 (405) Q Consensus 134 ~~~~nl~~L~~~g~~vi~P~~g~la~c~~------~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID 207 (405) .+....+.++..-+.+++=..|=+..|.. .|+=.-+.||+|+..+..++..+- |.|.|||-=|--|=- T Consensus 132 ~~~~~~~~~~~~~i~i~pI~~GC~~~CsYCi~K~ARG~L~S~PpEkiV~~ar~l~~~G~------kEI~iTs~DT~~YG~ 205 (487) T TIGR01578 132 TLLKEPEPRKNPLIEILPINQGCLGNCSYCITKIARGKLASYPPEKIVEKARELVAEGA------KEIWITSQDTAAYGK 205 (487) T ss_pred HHCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCC------CEEEECCCCCCCCCC T ss_conf 00032023146775555436663568875467776445248872256899999997053------126513446663442 Q ss_pred CEEEEECCCCCHHHHH-HHHHHHHCCCCEEEEECCCCCC----CCCCEEEEEHHHHHHHHHHHHHCCCC-CEE---EEE- Q ss_conf 1357621577278899-9999982588389984156677----65674675465778999999850588-879---974- Q gi|254780622|r 208 PMRYIANRSSGQQGHA-IAKSLAYFGAEVILISGPVSIA----DPPNVMTIHVERAEDMLQEVLKALPV-DIA---VMV- 277 (405) Q Consensus 208 ~VR~ItN~SSGk~G~~-iA~~~~~~Ga~V~li~g~~~~~----~~~~~~~i~v~t~~em~~~~~~~~~~-D~~---I~a- 277 (405) + +|.. |++=+.+ -+|-|-|..-+- .|+ ++.+-++.+.+.+.. |=+ .|. T Consensus 206 D-----------iG~~kLPeLL~~---~~t~I~g~F~~RVGMmnP~--------~~~~IldeL~~v~~~h~kV~kFLHlP 263 (487) T TIGR01578 206 D-----------IGERKLPELLRR---LITEIPGDFRLRVGMMNPK--------NVLEILDELIEVFQSHDKVYKFLHLP 263 (487) T ss_pred C-----------CCCCCCHHHHHH---HHHHCCCCCEEEEECCCCC--------CHHHHHHHHHHHHHCCCCEEEECCCC T ss_conf 2-----------376212799999---9862599327876258876--------33478899999985488200011542 Q ss_pred -HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCC-----CEEEEEECCCCHHHHHHHHHHHHCCCCE Q ss_conf -0444443222210112334557751045521806898876214899-----5899981141238999999999749989 Q gi|254780622|r 278 -SAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRP-----SIVVGFAAETQCIEQNAREKLLNKGADF 351 (405) Q Consensus 278 -AAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~-----~~lVGFkaET~~l~~~A~~Kl~~K~~D~ 351 (405) =--||+.. .+.+|. -+...-.||+..++++ .++ .++|||..||||.-|+..+-+++..=+. T Consensus 264 vQSGsD~VL-----~~M~R~-------y~v~~f~~Iv~~FR~~-~~~~tl~TDiIvGFp~EtdddFE~T~~l~~k~RPe~ 330 (487) T TIGR01578 264 VQSGSDSVL-----KEMKRE-------YTVDDFEDIVEKFRER-FPDLTLSTDIIVGFPTETDDDFEETMELLRKYRPEK 330 (487) T ss_pred CCCCCHHHH-----HHCCCC-------CCHHHHHHHHHHHHHH-HCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCE T ss_conf 015875889-----744856-------5257789999999876-268647300167178988355899999999828983 Q ss_pred EEEECCCCCC Q ss_conf 9992057767 Q gi|254780622|r 352 IVSNCILPDT 361 (405) Q Consensus 352 IVAN~i~~~~ 361 (405) |-.|.-++.. T Consensus 331 In~~~fS~Rp 340 (487) T TIGR01578 331 INVTKFSPRP 340 (487) T ss_pred EEEECCCCCC T ss_conf 4530246888 No 410 >PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional Probab=69.98 E-value=6.2 Score=19.35 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=28.1 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 79778984042010102135762157727889999999825883899841 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) .+|+|+|-+| |-.|.++|..+..+|.+||+|.- T Consensus 143 ~~k~vvVIGg-----------------G~IGlE~A~~l~~~G~~Vtvve~ 175 (400) T PRK09754 143 PERSVVIVGA-----------------GTIGLELAASATQRRCKVTVIEL 175 (400) T ss_pred CCCEEEEECC-----------------CHHHHHHHHHHHHCCCEEEEEEE T ss_conf 5873999885-----------------58999999999975994899953 No 411 >cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate. Probab=69.82 E-value=8.5 Score=18.49 Aligned_cols=176 Identities=18% Similarity=0.162 Sum_probs=100.4 Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE Q ss_conf 98405660000038899999998640001346521255310322333434558999999986310132001797789840 Q gi|254780622|r 120 LIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTS 199 (405) Q Consensus 120 ~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITa 199 (405) .+-|--...-.+....+++++.|.+.|+.=+-+ ||..|.+-....++-..-+....... .|+ +.|-+ T Consensus 8 ~iTPF~~dg~iD~~~~~~~i~~l~~~Gv~gi~v-------~GstGE~~~Ls~eEr~~v~~~~~~~~-----~g~-~~vi~ 74 (289) T cd00951 8 PVTHFDADGSFDEDAYRAHVEWLLSYGAAALFA-------AGGTGEFFSLTPDEYAQVVRAAVEET-----AGR-VPVLA 74 (289) T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CCHHHCCCCCCHHHHHHHHHHHHHHC-----CCC-CEEEE T ss_conf 138768995979999999999999779999997-------93300621289999999999999981-----898-51740 Q ss_pred CCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH Q ss_conf 42010102135762157727889999999825883899841566776567467546577899999985058887997404 Q gi|254780622|r 200 GPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA 279 (405) Q Consensus 200 G~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA 279 (405) |.+ .++ +--..+|+++...|++-.++.-| ++....-+...+.++++.++.+..+++-. T Consensus 75 g~g------------~~t-~~~i~la~~a~~~Gadav~v~pP-------y~~~~~~~~l~~~~~~ia~a~~lpi~lYn-- 132 (289) T cd00951 75 GAG------------YGT-ATAIAYAQAAEKAGADGILLLPP-------YLTEAPQEGLYAHVEAVCKSTDLGVIVYN-- 132 (289) T ss_pred CCC------------CHH-HHHHHHHHHHHHCCCCEEEECCC-------CCCCCCHHHHHHHHHHHHHHCCCCEEECC-- T ss_conf 676------------319-99999999999759999997698-------88899999999999999984699866148-- Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 444432222101123345577510455218068988762148995899981141238999999999749989999205 Q gi|254780622|r 280 VSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCI 357 (405) Q Consensus 280 VSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i 357 (405) . .. . .-+|+.+..+.+ +.| -++|+|--+.++. +..+-..+-+-++.+.+.+ T Consensus 133 --------~--------~~-----~--~~~~~~l~~L~~-~~p--~i~giK~s~~d~~-~~~~~~~~~~~~~~~~~g~ 183 (289) T cd00951 133 --------R--------AN-----A--VLTADSLARLAE-RCP--NLVGFKDGVGDIE-LMRRIVAKLGDRLLYLGGL 183 (289) T ss_pred --------C--------CC-----C--CCCHHHHHHHHH-HCC--CEEEEEECCCCHH-HHHHHHHHCCCCCEEEECC T ss_conf --------8--------77-----6--778999999998-368--7899997888999-9999999759982898589 No 412 >COG4081 Uncharacterized protein conserved in archaea [Function unknown] Probab=69.48 E-value=8.4 Score=18.51 Aligned_cols=27 Identities=26% Similarity=0.404 Sum_probs=22.8 Q ss_pred HHHHHHHHHHCCCEEEEEECHHHHHHC Q ss_conf 999999999879889998585686306 Q gi|254780622|r 21 SLDLIRRLRERGAVVIPVMTKSAQKFI 47 (405) Q Consensus 21 ~~~l~~~L~~~g~~V~vv~T~~A~~fi 47 (405) +..+...|++.|++|.|..|++|++++ T Consensus 21 aiYls~klkkkgf~v~VaateAa~kLl 47 (148) T COG4081 21 AIYLSHKLKKKGFDVTVAATEAALKLL 47 (148) T ss_pred HHHHHHHHHCCCCCEEEECCHHHHEEE T ss_conf 898887763058517996287662105 No 413 >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Probab=69.38 E-value=7.6 Score=18.79 Aligned_cols=27 Identities=22% Similarity=0.182 Sum_probs=23.0 Q ss_pred ECHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 2847899999999999987988999858 Q gi|254780622|r 13 CGSVAVYKSLDLIRRLRERGAVVIPVMT 40 (405) Q Consensus 13 tGsiaa~k~~~l~~~L~~~g~~V~vv~T 40 (405) +||++-+ +-.|.+.|.+.|++|.||+- T Consensus 15 vGGLg~v-v~~L~~aLa~~Gh~V~Vi~P 41 (476) T cd03791 15 TGGLGDV-VGALPKALAKLGHDVRVIMP 41 (476) T ss_pred CCCHHHH-HHHHHHHHHHCCCEEEEEEC T ss_conf 2679999-99999999977996999957 No 414 >TIGR02415 23BDH acetoin reductases; InterPro: IPR014007 One member of this family, as characterised in Klebsiella terrigena , is able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also capable of irreversible reduction of diacetyl with NADH to acetoin. There has been a reuctance to classify the enzyme as either 1.1.1.4 from EC, which is (R,R)-butanediol dehydrogenase, or 1.1.1.5 from EC, which is acetoin dehydrogenase without a specified stereochemistry . Another member of this family, from Corynebacterium glutamicum (Brevibacterium flavum), is called L-2,3-butanediol dehydrogenase . This enzyme is a homotetramer in the family of short chain dehydrogenases (IPR002198 from INTERPRO). . Probab=69.24 E-value=7.9 Score=18.68 Aligned_cols=69 Identities=26% Similarity=0.433 Sum_probs=43.8 Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC Q ss_conf 6600000388999999986400013465212553103223334345589999999863101320017977898404 Q gi|254780622|r 125 MNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSG 200 (405) Q Consensus 125 Mn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG 200 (405) -.|.||+. ..+.+.++. |-.-++-..... +.+.--||..+|||+..-+.++-.. ...+.-|.-+||=+| T Consensus 186 V~T~M~~~--Id~~~~~~~--gSk~i~~~~~~f--ss~I~LGR~~~PeDVA~lVSFLAS~-dSdYiTGQsilvDGG 254 (258) T TIGR02415 186 VKTEMWEE--IDEKTVELA--GSKPIGEGFEEF--SSEIKLGRLSEPEDVAGLVSFLASE-DSDYITGQSILVDGG 254 (258) T ss_pred CCCHHHHH--HHHHHHHHC--CCCCHHHHHHHH--HHHCCCCCCCCCCHHHHHHHHHCCC-CCCCCCCCEEEECCC T ss_conf 50541799--999998732--770067899998--7531379899971388788985147-678012653445174 No 415 >pfam03033 Glyco_transf_28 Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. Probab=69.23 E-value=3.8 Score=20.71 Aligned_cols=31 Identities=35% Similarity=0.347 Sum_probs=24.7 Q ss_pred EEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEE Q ss_conf 8984042010102135762157727889999999825883899 Q gi|254780622|r 195 ALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVIL 237 (405) Q Consensus 195 vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~l 237 (405) |++++|||--.+=| +.+||+++..+|++|.+ T Consensus 1 Ilia~GGTGGHv~P------------alala~~L~~~g~~v~i 31 (136) T pfam03033 1 VLLAGGGTRGHVFP------------AVALAWALRRRGHEVRL 31 (136) T ss_pred CEEEECCCHHHHHH------------HHHHHHHHHHCCCEEEE T ss_conf 98994415799999------------99999999985997712 No 416 >PRK01077 cobyrinic acid a,c-diamide synthase; Validated Probab=69.21 E-value=8.7 Score=18.41 Aligned_cols=84 Identities=21% Similarity=0.259 Sum_probs=52.6 Q ss_pred CCEEEEEEECHHH--HHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCC-CCCCCCCCC-CCCCCCCCC Q ss_conf 5569999528478--999999999999879889998585686306989999974797582-076788778-774300114 Q gi|254780622|r 5 GKKIALIMCGSVA--VYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYT-HLLSYKEGY-ESNHIQLAN 80 (405) Q Consensus 5 ~k~IllgvtGsia--a~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~-~~~~~~~~~-~~~Hi~l~~ 80 (405) =++|++.-|+|-+ ..=+.-|+|.|+++|..|.++= ..-.||.|...+.++|++++. |.|-..+.. ...-..++. T Consensus 3 ~p~lmI~gt~S~~GKT~vt~gL~r~l~~rG~~VapFK--~GPDyIdp~~~~~a~g~~~~nLD~~l~~~~~v~~~~~~~~~ 80 (451) T PRK01077 3 MPALVIAAPASGSGKTTVTLGLMRALRRRGLRVQPFK--VGPDYIDPAFHAAATGRPSRNLDSWMMGEDLVRALFARAAG 80 (451) T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHCC T ss_conf 8879998689999789999999999996879457535--78576298999999789753588344899999999997546 Q ss_pred CCCEEEEEEC Q ss_conf 4655788411 Q gi|254780622|r 81 ECDLLVVAPA 90 (405) Q Consensus 81 ~aD~~iVaPa 90 (405) .+|+.||=-+ T Consensus 81 ~~D~~viEG~ 90 (451) T PRK01077 81 GADIAVIEGV 90 (451) T ss_pred CCCEEEEEEC T ss_conf 6888998501 No 417 >COG5157 CDC73 RNA polymerase II assessory factor [Transcription] Probab=69.20 E-value=4.4 Score=20.29 Aligned_cols=79 Identities=23% Similarity=0.376 Sum_probs=50.2 Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC- Q ss_conf 2799689840566000003889999999864000134652125531032233343455899999998631013200179- Q gi|254780622|r 114 KGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKG- 192 (405) Q Consensus 114 ~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~g- 192 (405) +++-||++.|.-- .+|.|..|+++.-+.|. +|.|+. ++.|-+ -||+.+.+..... +.| T Consensus 202 ~~kDPIIlvp~sa----SS~lt~~NIK~FleEgk-yV~P~n--~~~~~~--G~~i~~~eK~~~~------------~~g~ 260 (362) T COG5157 202 YAKDPIILVPQSA----SSPLTLSNIKEFLEEGK-YVNPRN--LPSCSD--GIRISEVEKVELD------------LDGP 260 (362) T ss_pred CCCCCEEEECCCC----CCCEEHHHHHHHHHHCC-CCCCCC--CCCCCC--CCEEEEEEEHHHC------------CCCC T ss_conf 2689648836224----66302887999997067-568422--556899--8067754302230------------4685 Q ss_pred CEEEE---EECCCHHEECCEEEEE Q ss_conf 77898---4042010102135762 Q gi|254780622|r 193 KRALV---TSGPTYEPLDPMRYIA 213 (405) Q Consensus 193 k~vlI---TaG~T~E~ID~VR~It 213 (405) .+.+| |.|=+.||.|.|-+|= T Consensus 261 ~rfIiVd~t~~FkpeyWdRVVciF 284 (362) T COG5157 261 FRFIIVDDTGGFKPEYWDRVVCIF 284 (362) T ss_pred EEEEEECCCCCCCHHHHCEEEEEE T ss_conf 589998578886841202379999 No 418 >COG0031 CysK Cysteine synthase [Amino acid transport and metabolism] Probab=68.76 E-value=7.7 Score=18.75 Aligned_cols=132 Identities=20% Similarity=0.318 Sum_probs=64.1 Q ss_pred CEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC-CCC-HHHHHHC Q ss_conf 55788411188898852024552146667522799689840566000003889999999864000134-652-1255310 Q gi|254780622|r 83 DLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFI-GPE-SGAMAES 160 (405) Q Consensus 83 D~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi-~P~-~g~la~c 160 (405) .-.||=|.|.|| ||+ |..++.+..-+-+++.|. .| .++-.+.|+.+|..++ -|. .|.+ T Consensus 62 G~tIVE~TSGNT------GIa---LA~vaa~~Gy~~~ivmP~---~~-----S~er~~~l~a~GAevi~t~~~~g~~--- 121 (300) T COG0031 62 GGTIVEATSGNT------GIA---LAMVAAAKGYRLIIVMPE---TM-----SQERRKLLRALGAEVILTPGAPGNM--- 121 (300) T ss_pred CCEEEEECCCHH------HHH---HHHHHHHCCCCEEEEECC---CC-----CHHHHHHHHHCCCEEEECCCCCCCH--- T ss_conf 998997089727------999---999999819928999589---89-----9999999998299899837987745--- Q ss_pred CCCCCCCCCCHHHHHHHHHH-HHHC---CCCCCCCCCEEEEEECCC-HHEEC--CEEEEECCCCCHHHHHHHHHHHHCCC Q ss_conf 32233343455899999998-6310---132001797789840420-10102--13576215772788999999982588 Q gi|254780622|r 161 NGYGVGRMSEPCDIIRQITW-LLYK---SKELLLKGKRALVTSGPT-YEPLD--PMRYIANRSSGQQGHAIAKSLAYFGA 233 (405) Q Consensus 161 ~~~G~grl~e~~~I~~~~~~-~~~~---~~~~~l~gk~vlITaG~T-~E~ID--~VR~ItN~SSGk~G~~iA~~~~~~Ga 233 (405) +|+...-.++....-. .+.. .++.++.- |-- |.|+- ++..| +--|+.-..||=+=.-+++++..+.. T Consensus 122 ----~~a~~~a~el~~~~p~~~~~~~Qf~NpaN~~a-H~~-tT~~EI~~~~~~~~d~fVagvGTGGTitGvar~Lk~~~p 195 (300) T COG0031 122 ----KGAIERAKELAAEIPGYAVWLNQFENPANPEA-HYE-TTGPEIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNP 195 (300) T ss_pred ----HHHHHHHHHHHHHCCCCEECHHHCCCCCCHHH-HHH-HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCC T ss_conf ----99999999999749883675534389647898-976-128999997379999899937852658999999986289 Q ss_pred CEEEEEC Q ss_conf 3899841 Q gi|254780622|r 234 EVILISG 240 (405) Q Consensus 234 ~V~li~g 240 (405) ++.+|.- T Consensus 196 ~i~iv~v 202 (300) T COG0031 196 NVRIVAV 202 (300) T ss_pred CCEEEEE T ss_conf 8379997 No 419 >PRK04965 nitric oxide reductase; Provisional Probab=68.72 E-value=6.4 Score=19.26 Aligned_cols=33 Identities=33% Similarity=0.534 Sum_probs=28.7 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 79778984042010102135762157727889999999825883899841 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) ..|+|+|-+| |-.|.++|..+..+|.+||+|+. T Consensus 140 ~~krvvVIGg-----------------G~IG~E~A~~L~~~G~~Vtvve~ 172 (378) T PRK04965 140 DAQRVLVVGG-----------------GLIGTELAMDLCRAGKAVTLVDN 172 (378) T ss_pred CCCEEEEECC-----------------CHHHHHHHHHHHHCCCEEEEECC T ss_conf 4978999898-----------------38899999999967988999766 No 420 >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] Probab=68.61 E-value=9 Score=18.33 Aligned_cols=241 Identities=16% Similarity=0.129 Sum_probs=127.7 Q ss_pred EEEEEEECHH-----HHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 6999952847-----89999999999998798899985856863069899999747975820767887787743001144 Q gi|254780622|r 7 KIALIMCGSV-----AVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANE 81 (405) Q Consensus 7 ~IllgvtGsi-----aa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~ 81 (405) ||++-.-||. -.+++..|+|.|.+.|+.+-.+-++..+.|+++ .++ .++...+.+.. -|. +.. T Consensus 2 ~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~-~~~-~f~~~~~~~~n---------~ik-~~k 69 (318) T COG3980 2 KVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHK-VYE-GFKVLEGRGNN---------LIK-EEK 69 (318) T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHH-HHH-HCCCEEEECCC---------CCC-CCC T ss_conf 579992687555751345599999999851746888406625642156-665-10430023364---------100-366 Q ss_pred CCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHH--HHHHHHHHHHHHHHCCCCCCCCHHHHHH Q ss_conf 65578841118889885202455214666752279968984056600000--3889999999864000134652125531 Q gi|254780622|r 82 CDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWA--KPATQRNVEILQKDGCYFIGPESGAMAE 159 (405) Q Consensus 82 aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~--~p~~~~nl~~L~~~g~~vi~P~~g~la~ 159 (405) .|++|+=- .|+.-+..-.+-.- ...+++++--||..-.. .-++-.++...+ +++..|..-.+ T Consensus 70 ~d~lI~Ds----------ygl~~dd~k~ik~e-~~~k~l~fDd~~~~~~~d~d~ivN~~~~a~~---~y~~v~~k~~~-- 133 (318) T COG3980 70 FDLLIFDS----------YGLNADDFKLIKEE-AGSKILIFDDENAKSFKDNDLIVNAILNAND---YYGLVPNKTRY-- 133 (318) T ss_pred CCEEEEEC----------CCCCHHHHHHHHHH-HCCCEEEECCCCCCCHHHHHHHHHHHHCCHH---HCCCCCCCEEE-- T ss_conf 77899942----------68887899998897-3881799647776422566735455535112---20536766379-- Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 03223334345589999999863101320017977898404201010213576215772788999999982588389984 Q gi|254780622|r 160 SNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILIS 239 (405) Q Consensus 160 c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~ 239 (405) ..|.+-.|=.++-+..-.....+ .-+.||||-|||-- ++.++ .+..++...-....++. T Consensus 134 --~lGp~y~~lr~eF~~~r~~~~~r------~~r~ilI~lGGsDp------------k~lt~-kvl~~L~~~~~nl~iV~ 192 (318) T COG3980 134 --YLGPGYAPLRPEFYALREENTER------PKRDILITLGGSDP------------KNLTL-KVLAELEQKNVNLHIVV 192 (318) T ss_pred --EECCCCEECCHHHHHHHHHHHHC------CHHEEEEECCCCCH------------HHHHH-HHHHHHHCCCEEEEEEE T ss_conf --96587114169999868998635------31128997168872------------44599-99998403570499994 Q ss_pred CCCC---CCC------CCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECH Q ss_conf 1566---776------5674675465778999999850588879974044444322221011233455775104552180 Q gi|254780622|r 240 GPVS---IAD------PPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENP 310 (405) Q Consensus 240 g~~~---~~~------~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~p 310 (405) |..+ ... .+.++ ....+++|-+-+. ++|..|.||--+=|-.-- -++ ..|.|.+.+|. T Consensus 193 gs~~p~l~~l~k~~~~~~~i~--~~~~~~dma~LMk---e~d~aI~AaGstlyEa~~---lgv------P~l~l~~a~NQ 258 (318) T COG3980 193 GSSNPTLKNLRKRAEKYPNIN--LYIDTNDMAELMK---EADLAISAAGSTLYEALL---LGV------PSLVLPLAENQ 258 (318) T ss_pred CCCCCCHHHHHHHHHHCCCEE--EEECCHHHHHHHH---HCCHHEECCCHHHHHHHH---HCC------CCEEEEEECCH T ss_conf 688854667888886578802--6862245899998---603331446357999998---269------82587633017 No 421 >PRK05038 consensus Probab=68.52 E-value=9 Score=18.32 Aligned_cols=19 Identities=26% Similarity=0.235 Sum_probs=10.5 Q ss_pred CCCHHHHHHHHHHHHCCCC Q ss_conf 7727889999999825883 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFGAE 234 (405) Q Consensus 216 SSGk~G~~iA~~~~~~Ga~ 234 (405) |||.+=..-|+.+..+||. T Consensus 224 dTGgTl~~aa~~Lk~~GA~ 242 (315) T PRK05038 224 DTGGTLCKAAEALKERGAK 242 (315) T ss_pred CCHHHHHHHHHHHHHCCCC T ss_conf 2515899999999965998 No 422 >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional Probab=68.46 E-value=9 Score=18.31 Aligned_cols=93 Identities=18% Similarity=0.271 Sum_probs=49.4 Q ss_pred HHHHCCCC-EEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEE Q ss_conf 99825883-89984156677656746754657789999998505888799740444443222210112334557751045 Q gi|254780622|r 227 SLAYFGAE-VILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRID 305 (405) Q Consensus 227 ~~~~~Ga~-V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~ 305 (405) .+...|.+ |++++|......|. ..|||.+|.+||+.|- |+.-.++ +| . +..|.+. T Consensus 119 ~L~~lG~~NV~vv~GDG~~G~pe-------------------~APYD~IIVTAaa~~I-P~aLldQ-Lk--~-GGRLViP 174 (317) T PRK13943 119 NVERLGIENVIFVCGDGYYGVPE-------------------FSPYDVIFVTVGVDEV-PETWFTQ-LK--E-GGRVIVP 174 (317) T ss_pred HHHHCCCCCEEEEECCCCCCCCC-------------------CCCCCEEEEEECCCCC-CHHHHHH-CC--C-CCEEEEE T ss_conf 99977998649997998888866-------------------7997789998527648-9999996-18--5-9699998 Q ss_pred EEECHHHHH----HHHHCCCCCCEEEEEECCC---------CHHHHHHHHHHHH Q ss_conf 521806898----8762148995899981141---------2389999999997 Q gi|254780622|r 306 LMENPDILK----IIGHHQCRPSIVVGFAAET---------QCIEQNAREKLLN 346 (405) Q Consensus 306 L~~~pdIL~----~i~~~k~~~~~lVGFkaET---------~~l~~~A~~Kl~~ 346 (405) +. -++++ .+- .|..+.+.=+|++|| +++.++-+++|.. T Consensus 175 vn--~~~~~~q~~~~~-~k~~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~l~~ 225 (317) T PRK13943 175 IN--LKLSRRQPAFLF-KKKDPYLVGNYKLETRFITAGGNLGNLLERNRKLLRE 225 (317) T ss_pred EE--EEEECCCCCEEE-EECCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHC T ss_conf 41--065056865357-7437764343589998886478613216778999864 No 423 >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Probab=68.32 E-value=9.1 Score=18.29 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=25.6 Q ss_pred EEEEEE------ECHHHHHHHHHHHHHHHHCCCEEEEEECHH Q ss_conf 699995------284789999999999998798899985856 Q gi|254780622|r 7 KIALIM------CGSVAVYKSLDLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 7 ~Illgv------tGsiaa~k~~~l~~~L~~~g~~V~vv~T~~ 42 (405) |||+.+ .||+.-+ +.+|++.|.+.|++|+++.+.. T Consensus 1 KIl~i~~~~~P~~GG~e~~-~~~la~~L~~~Gh~V~v~t~~~ 41 (375) T cd03821 1 KILHVIPSFDPKYGGPVRV-VLNLSKALAKLGHEVTVATTDA 41 (375) T ss_pred CEEEEECCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEECCC T ss_conf 9899959889999989999-9999999997799899997079 No 424 >PRK07818 dihydrolipoamide dehydrogenase; Reviewed Probab=68.28 E-value=4 Score=20.59 Aligned_cols=74 Identities=15% Similarity=0.250 Sum_probs=46.0 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECC----EEEEEC---------------CCCCHHHHH Q ss_conf 2333434558999999986310132001797789840420101021----357621---------------577278899 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDP----MRYIAN---------------RSSGQQGHA 223 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~----VR~ItN---------------~SSGk~G~~ 223 (405) .|.|++.++..+.-.. .......+..++++|-.|.+.-.+-. =+.++. --.|-.|.+ T Consensus 111 ~G~a~f~~~~~v~V~~----~~~~~~~i~a~~iiIATGs~p~~lPg~~~~~~~~~~~~~~~~~~lPk~v~IiGgG~ig~E 186 (467) T PRK07818 111 HGYGTFTDANTLEVDL----NDGGTETVTFDNAIIATGSSTRLLPGTSLSENVVTYEEQILSRELPKSIVIAGAGAIGME 186 (467) T ss_pred ECEEEEECCCEEEEEC----CCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCEEEEECCCHHHHH T ss_conf 4307982485138971----789627999526898768876657886788877853577233458966999998799999 Q ss_pred HHHHHHHCCCCEEEEEC Q ss_conf 99999825883899841 Q gi|254780622|r 224 IAKSLAYFGAEVILISG 240 (405) Q Consensus 224 iA~~~~~~Ga~V~li~g 240 (405) +|..+...|.+||+|.- T Consensus 187 ~A~~~~~lG~~Vtiv~~ 203 (467) T PRK07818 187 FAYVLKNYGVDVTIVEF 203 (467) T ss_pred HHHHHHHCCCEEEEEEE T ss_conf 99999832987777621 No 425 >pfam00070 Pyr_redox Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain. Probab=68.09 E-value=5.7 Score=19.59 Aligned_cols=28 Identities=25% Similarity=0.373 Sum_probs=23.7 Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCC Q ss_conf 7727889999999825883899841566 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFGAEVILISGPVS 243 (405) Q Consensus 216 SSGk~G~~iA~~~~~~Ga~V~li~g~~~ 243 (405) -.|-.|.++|..+..+|.+||+|..... T Consensus 6 GgG~ig~E~A~~l~~~G~~Vtiie~~~~ 33 (82) T pfam00070 6 GGGYIGLEFASALAKLGSKVTVVERRDR 33 (82) T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCC T ss_conf 9889999999999863927899812573 No 426 >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog Probab=67.85 E-value=9.3 Score=18.23 Aligned_cols=34 Identities=29% Similarity=0.508 Sum_probs=25.9 Q ss_pred EEEEEEE----CHHHHHHHHHHHHHHHHCCCEEEEEECHH Q ss_conf 6999952----84789999999999998798899985856 Q gi|254780622|r 7 KIALIMC----GSVAVYKSLDLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 7 ~Illgvt----Gsiaa~k~~~l~~~L~~~g~~V~vv~T~~ 42 (405) ||++. | ||+..| +.+|.+.|.+.|++|+++.+.. T Consensus 2 kI~i~-~~P~~GG~e~~-v~~La~~L~~~GHeV~vit~~~ 39 (371) T cd04962 2 KIGIV-CYPTYGGSGVV-ATELGKALARRGHEVHFITSSR 39 (371) T ss_pred EEEEE-CCCCCCCHHHH-HHHHHHHHHHCCCEEEEEECCC T ss_conf 79998-99999869999-9999999997599999995689 No 427 >PRK05752 uroporphyrinogen-III synthase; Validated Probab=67.74 E-value=9.3 Score=18.22 Aligned_cols=158 Identities=23% Similarity=0.271 Sum_probs=76.5 Q ss_pred CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHH----HHHHHHCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 885569999528478999999999999879889998585686306989----9999747975820767887787743001 Q gi|254780622|r 3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPL----IVGAISNRRVYTHLLSYKEGYESNHIQL 78 (405) Q Consensus 3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~----~l~~lt~~~v~~~~~~~~~~~~~~Hi~l 78 (405) |+|||||+-=... ..-.|++.|...|+++....+= ++ .|. .+..+ +. +| T Consensus 1 L~G~rVLVTRP~~----qa~~L~~~L~~~G~~~~~~Pli---~I-~p~~~~~~~~~~-----l~--------------~l 53 (255) T PRK05752 1 MSGWRLLLTRPAE----DCAALAASLAEAGIHSSSLPLL---AI-EPLPLTPEQRAL-----LL--------------EL 53 (255) T ss_pred CCCCEEEEECCHH----HHHHHHHHHHHCCCCEEECCCE---EE-EECCCCHHHHHH-----HH--------------CC T ss_conf 9987899809778----8999999999779978972888---98-428997789999-----86--------------28 Q ss_pred CCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH Q ss_conf 14465578841118889885202455214666752279968984056600000388999999986400013465212553 Q gi|254780622|r 79 ANECDLLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMA 158 (405) Q Consensus 79 ~~~aD~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la 158 (405) .++..++++-|--++..... + ...-......+ .++ --|.|. +.|+++|..+.-|..+. T Consensus 54 ~~~d~vifvS~nAv~~~~~~---l-----~~~~~~~~~~~-~~A--------VG~~TA---~aL~~~G~~v~~p~~~~-- 111 (255) T PRK05752 54 DRYCAVIVVSKPAARLGLEL---L-----DEYWPQPPQQP-WFS--------VGAATA---AILQDYGLDVSYPEQGD-- 111 (255) T ss_pred CCCCEEEEECHHHHHHHHHH---H-----HHHCCCCCCCE-EEE--------ECHHHH---HHHHHCCCCCCCCCCCC-- T ss_conf 88688999877999999999---9-----86288953382-899--------889999---99997699824489877-- Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEE Q ss_conf 10322333434558999999986310132001797789840420101021357621577278899999998258838998 Q gi|254780622|r 159 ESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILI 238 (405) Q Consensus 159 ~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li 238 (405) +-||.-.+|+. . ....+.|+||||--|- .|| -.|++.+..+||.|.++ T Consensus 112 --~SE~LL~lp~l-----------~--~~~~~~g~rVLi~rG~---------------gGR--~~L~~~L~~rGa~V~~~ 159 (255) T PRK05752 112 --DSEALLALPAL-----------R--QALAVPDPRVLIMRGE---------------GGR--ELLAERLREQGASVDYL 159 (255) T ss_pred --CHHHHHHCHHH-----------H--HHHCCCCCEEEEEECC---------------CCH--HHHHHHHHHCCCEEEEE T ss_conf --76788605545-----------4--2204778879998167---------------617--89999999889989899 Q ss_pred ECC Q ss_conf 415 Q gi|254780622|r 239 SGP 241 (405) Q Consensus 239 ~g~ 241 (405) .-. T Consensus 160 ~~Y 162 (255) T PRK05752 160 ELY 162 (255) T ss_pred EEE T ss_conf 878 No 428 >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Probab=67.67 E-value=8 Score=18.66 Aligned_cols=32 Identities=25% Similarity=0.218 Sum_probs=25.8 Q ss_pred EEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 999952847899999999999987988999858 Q gi|254780622|r 8 IALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT 40 (405) Q Consensus 8 IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T 40 (405) +..|=|||+..| +.+|.+.|.+.|++|.|+-. T Consensus 14 ~g~gd~GG~e~~-v~~La~~La~rGheV~V~t~ 45 (405) T TIGR03449 14 PGTGDAGGMNVY-ILETATELARRGIEVDIFTR 45 (405) T ss_pred CCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEEC T ss_conf 999995886999-99999999978996999935 No 429 >COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] Probab=67.67 E-value=5.7 Score=19.61 Aligned_cols=192 Identities=22% Similarity=0.232 Sum_probs=90.1 Q ss_pred CCCCEEE---EEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHH-HHHCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 8855699---99528478999999999999879889998585686306989999-9747975820767887787743001 Q gi|254780622|r 3 LSGKKIA---LIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVG-AISNRRVYTHLLSYKEGYESNHIQL 78 (405) Q Consensus 3 l~~k~Il---lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~-~lt~~~v~~~~~~~~~~~~~~Hi~l 78 (405) +.||+|+ +|+|| +| .++.|.+.|++|++.=++.+. -++.... ...+-++.... ... +. T Consensus 5 ~~~~kv~V~GLG~sG-~a------~a~~L~~~G~~v~v~D~~~~~--~~~~~~~~~~~~i~~~~g~--------~~~-~~ 66 (448) T COG0771 5 FQGKKVLVLGLGKSG-LA------AARFLLKLGAEVTVSDDRPAP--EGLAAQPLLLEGIEVELGS--------HDD-ED 66 (448) T ss_pred CCCCEEEEEECCCCC-HH------HHHHHHHCCCEEEEECCCCCC--CCHHHHHHHCCCCEEECCC--------CCH-HC T ss_conf 059979999266510-99------999999779869998389876--5323444420372231376--------411-00 Q ss_pred CCCCCEEEEEECC---HHHHHHH-HCCCCCCHHHHHHHHC---CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 1446557884111---8889885-2024552146667522---7996898405660000038899999998640001346 Q gi|254780622|r 79 ANECDLLVVAPAS---ANFIAHV-AHGMVYDLASAILLAK---GDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIG 151 (405) Q Consensus 79 ~~~aD~~iVaPaT---aNtiaK~-A~GiaD~llt~~~la~---~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~ 151 (405) -.++|++|+-|-= -..+-+. +.|+ -.++-+-|++ ...|++..---|..- -+|.=--..|+..|.... T Consensus 67 ~~~~d~vV~SPGi~~~~p~v~~A~~~gi--~i~~dieL~~r~~~~~p~vaITGTNGKT---TTTsli~~~l~~~G~~~~- 140 (448) T COG0771 67 LAEFDLVVKSPGIPPTHPLVEAAKAAGI--EIIGDIELFYRLSGEAPIVAITGTNGKT---TTTSLIAHLLKAAGLDAL- 140 (448) T ss_pred CCCCCEEEECCCCCCCCHHHHHHHHCCC--CEEEHHHHHHHHCCCCCEEEEECCCCHH---HHHHHHHHHHHHCCCCCE- T ss_conf 1347789989999998889999998699--3774888898744899989997999628---899999999985599832- Q ss_pred CCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEE---CC-EEEEECCC-------CCHH Q ss_conf 5212553103223334345589999999863101320017977898404201010---21-35762157-------7278 Q gi|254780622|r 152 PESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPL---DP-MRYIANRS-------SGQQ 220 (405) Q Consensus 152 P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~I---D~-VR~ItN~S-------SGk~ 220 (405) . ||..|..-+ +.+.. ..+ .+.-||=.|-=+-|.. +| +=.|+|.| .+.. T Consensus 141 ------l-gGNIG~p~l----~~~~~-------~~~---~d~~VlElSSfQL~~~~~~~P~iavilNi~~DHLD~H~s~e 199 (448) T COG0771 141 ------L-GGNIGTPAL----ELLEQ-------AEP---ADVYVLELSSFQLETTSSLRPEIAVILNISEDHLDRHGSME 199 (448) T ss_pred ------E-CCCCCCCHH----HHHCC-------CCC---CCEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHCCCHH T ss_conf ------1-351671378----76201-------578---98799992455516576678557999448877865606999 Q ss_pred HHHHHHHHHHCCCC-EEEEE Q ss_conf 89999999825883-89984 Q gi|254780622|r 221 GHAIAKSLAYFGAE-VILIS 239 (405) Q Consensus 221 G~~iA~~~~~~Ga~-V~li~ 239 (405) -|.-|+.=...+.. +-++. T Consensus 200 ~Y~~aK~~i~~~~~~~~Vin 219 (448) T COG0771 200 NYAAAKLRILEGQTEVAVIN 219 (448) T ss_pred HHHHHHHHHHCCCCCEEEEE T ss_conf 99999999983896279983 No 430 >PRK00081 coaE dephospho-CoA kinase; Reviewed Probab=67.58 E-value=4.7 Score=20.14 Aligned_cols=28 Identities=25% Similarity=0.315 Sum_probs=20.2 Q ss_pred EEEEEECHHHHHHHHHHHHHHHHCCCEEE Q ss_conf 99995284789999999999998798899 Q gi|254780622|r 8 IALIMCGSVAVYKSLDLIRRLRERGAVVI 36 (405) Q Consensus 8 IllgvtGsiaa~k~~~l~~~L~~~g~~V~ 36 (405) +++||||+|++-|+. +++.|++.|+.|. T Consensus 3 ~~IgiTG~igsGKSt-v~~~l~~~G~~vi 30 (199) T PRK00081 3 LIIGLTGGIGSGKST-VANIFAELGVPVI 30 (199) T ss_pred EEEEEECCCCCCHHH-HHHHHHHCCCCEE T ss_conf 899957888777999-9999998899399 No 431 >CHL00099 ilvB acetohydroxyacid synthase large subunit Probab=67.58 E-value=9.4 Score=18.20 Aligned_cols=162 Identities=16% Similarity=0.213 Sum_probs=92.3 Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHH-------EECCEEEEECCCCCHHHHHHHH----HHHHCCCCE Q ss_conf 43455899999998631013200179778984042010-------1021357621577278899999----998258838 Q gi|254780622|r 167 RMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYE-------PLDPMRYIANRSSGQQGHAIAK----SLAYFGAEV 235 (405) Q Consensus 167 rl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E-------~ID~VR~ItN~SSGk~G~~iA~----~~~~~Ga~V 235 (405) ....|.+++..+..+. ...++++-+|+.. ...|-+++++.+.|-||+.+.- .+...+-.| T Consensus 377 ~~l~p~~~~~~l~~l~---------~d~iiv~D~G~~~~~~~~~~~~~p~~~~~~~~~GsmG~glPaAiGA~lA~p~r~V 447 (588) T CHL00099 377 TSLSPQEVINEISQLA---------QNAYFTTDVGQHQMWAAQFLKVGPRKWISSAGLGTMGYGLPAAIGAQVAHPNEQV 447 (588) T ss_pred CCCCHHHHHHHHHHHC---------CCCEEEECCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCE T ss_conf 8729999999998638---------9858995786036789875315899476368875523318999999985899818 Q ss_pred EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHH-HHCCCC-CCCCCCCCEEEEEECHHHH Q ss_conf 99841566776567467546577899999985058887997404444432222-101123-3455775104552180689 Q gi|254780622|r 236 ILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKI-AGTKIK-RKDIGDTMRIDLMENPDIL 313 (405) Q Consensus 236 ~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~-~~~Kik-k~s~~~~l~L~L~~~pdIL 313 (405) .++.|-.+. --|.+|+..++...++.=++|+.=. -|-..+. .+.... +.... .+. .+.||.. T Consensus 448 v~i~GDGsf----------~mt~qEL~Tavr~~lpv~ivV~NN~--~yg~ir~~q~~~~~~~~~~~---~~~-~~~pDf~ 511 (588) T CHL00099 448 ICISGDASF----------QMNLQELGTIAQYKLPIKIIIINNK--WQGMVRQWQQAFYGERYSHS---NME-EGAPDFV 511 (588) T ss_pred EEEECCHHH----------HHHHHHHHHHHHHCCCCEEEEEECC--CCHHHHHHHHHHCCCCCCCC---CCC-CCCCCHH T ss_conf 999754586----------3219999999996899589999798--33699999998628876744---576-8998999 Q ss_pred HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCC Q ss_conf 887621489958999811412389999999997499899992057 Q gi|254780622|r 314 KIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNCIL 358 (405) Q Consensus 314 ~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~i~ 358 (405) + +.+--. +-||..++.+-++.|.++..+.+-=.+|-=.|+ T Consensus 512 ~-lA~a~G----~~g~rV~~~~el~~Al~~Al~~~gP~lIeV~vd 551 (588) T CHL00099 512 K-LAEAFG----IKGITIKSRKDLKSKLQRALDYDGPVLVDCQVR 551 (588) T ss_pred H-HHHHCC----CEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEC T ss_conf 9-999779----989997999999999999982999789999978 No 432 >pfam00701 DHDPS Dihydrodipicolinate synthetase family. This family has a TIM barrel structure. Probab=67.26 E-value=9.5 Score=18.16 Aligned_cols=179 Identities=17% Similarity=0.163 Sum_probs=98.4 Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE Q ss_conf 68984056600000388999999986400013465212553103223334345589999999863101320017977898 Q gi|254780622|r 118 PVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALV 197 (405) Q Consensus 118 pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlI 197 (405) |.++-|.-...-.+....+++++.|.+.|+.=+-+ ||-.|.+-....++-..-+....... +| ++-| T Consensus 7 ~a~~TPF~~dg~iD~~~~~~~i~~l~~~Gv~gi~v-------~GstGE~~~Ls~~Er~~v~~~~~~~~-----~~-~~pv 73 (289) T pfam00701 7 TALVTPFDTDGRLDEEALRKLIEFLINKGADGLFV-------GGTTGESFTLSTEEHEQLIEITVDEA-----KG-RIPV 73 (289) T ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CEECCCCCCCCHHHHHHHHHHHHHHC-----CC-CCEE T ss_conf 52667789685969999999999999779999997-------83640311388999999999999981-----99-8628 Q ss_pred EECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEE Q ss_conf 40420101021357621577278899999998258838998415667765674675465778999999850588879974 Q gi|254780622|r 198 TSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMV 277 (405) Q Consensus 198 TaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~a 277 (405) .+|-+.. |=+.-.++|+.+...|++-.++.-|... . ..-+...++++++.+..+..+++. T Consensus 74 i~gv~~~------------st~~~i~~a~~A~~~Gad~i~v~pP~y~------~-~~~~~i~~~~~~va~a~~lPi~iY- 133 (289) T pfam00701 74 IAGTGSN------------STREAIHLAQLAEAAGADGVLAVTPYYN------K-PSQEGLYQHFKAIAAATDLPVILY- 133 (289) T ss_pred EECCCCC------------CHHHHHHHHHHHHHCCCCEEEECCCCCC------C-CCHHHHHHHHHHHHHCCCCCEEEE- T ss_conf 6378887------------8999999999999749997887799888------9-999999999999983159977997- Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEE Q ss_conf 044444322221011233455775104552180689887621489958999811412389999999997499899992 Q gi|254780622|r 278 SAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSN 355 (405) Q Consensus 278 AAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN 355 (405) -.+.. ++ . .-+|+.+..|.+ .| -++|+|-.+.++.... +-+...+-++.|.+ T Consensus 134 ------n~P~~--------tg-----~--~l~~~~l~~L~~--~~--~i~giK~ss~~~~~~~-~~~~~~~~~~~v~~ 185 (289) T pfam00701 134 ------NVPSR--------TG-----Q--DLTPETIERLAE--CP--NVVGVKDAVGDLERME-NIRKRAGPDFTILS 185 (289) T ss_pred ------ECCCC--------CC-----C--CCCHHHHHHHHC--CC--CEEEEEECCCCHHHHH-HHHHHCCCCCEEEC T ss_conf ------15654--------03-----3--679999999826--89--9899996998999999-99996699824506 No 433 >KOG1221 consensus Probab=66.97 E-value=9.7 Score=18.12 Aligned_cols=102 Identities=14% Similarity=0.204 Sum_probs=45.7 Q ss_pred CCCCEEE-EEEECHHHHHHHHHHHHHHHHCCC---EEEEEECH----HHHHHCCH----HHHHHHHCC---------CCC Q ss_conf 8855699-995284789999999999998798---89998585----68630698----999997479---------758 Q gi|254780622|r 3 LSGKKIA-LIMCGSVAVYKSLDLIRRLRERGA---VVIPVMTK----SAQKFITP----LIVGAISNR---------RVY 61 (405) Q Consensus 3 l~~k~Il-lgvtGsiaa~k~~~l~~~L~~~g~---~V~vv~T~----~A~~fi~~----~~l~~lt~~---------~v~ 61 (405) ++||.|+ -|-||-.+-+ ++..|-|.-. .++..+-. ++++.+.. ..|+.+... +|. T Consensus 10 ~~~k~i~vTG~tGFlgKV----liEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~ 85 (467) T KOG1221 10 YKNKTIFVTGATGFLGKV----LIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIA 85 (467) T ss_pred HCCCEEEEECCCCHHHHH----HHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCEECC T ss_conf 579859997276345789----9999985076765699998347898778999998744699999863952102000012 Q ss_pred CCCCCCCCCCCCCCC-CCCCCCCEEEEEECCHHHHHHHHCCCCCCHHH Q ss_conf 207678877877430-01144655788411188898852024552146 Q gi|254780622|r 62 THLLSYKEGYESNHI-QLANECDLLVVAPASANFIAHVAHGMVYDLAS 108 (405) Q Consensus 62 ~~~~~~~~~~~~~Hi-~l~~~aD~~iVaPaTaNtiaK~A~GiaD~llt 108 (405) -|....+-+-+.... .+.+.-|+++=.-||-++-.++-.++.=|... T Consensus 86 GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~G 133 (467) T KOG1221 86 GDISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRG 133 (467) T ss_pred CCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHH T ss_conf 566686668882778888745778999530422553665654222274 No 434 >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. Probab=66.48 E-value=9.9 Score=18.06 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=21.8 Q ss_pred CCCEEEE--EECCCCHHH----HHHHHHHHHCCCCEEEEECC Q ss_conf 9958999--811412389----99999999749989999205 Q gi|254780622|r 322 RPSIVVG--FAAETQCIE----QNAREKLLNKGADFIVSNCI 357 (405) Q Consensus 322 ~~~~lVG--FkaET~~l~----~~A~~Kl~~K~~D~IVAN~i 357 (405) +...+.| ||..|+|+- -...+.|.++|++..+.-+. T Consensus 314 ~~I~ilGlafK~~tdD~R~Sps~~ii~~L~~~g~~V~~~DP~ 355 (411) T TIGR03026 314 KTVLILGLAFKPNTDDVRESPALDIIELLKEKGAKVKAYDPL 355 (411) T ss_pred CEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCC T ss_conf 613787411069998534582999999999788989999998 No 435 >PRK00654 glgA glycogen synthase; Provisional Probab=66.44 E-value=9.4 Score=18.20 Aligned_cols=27 Identities=19% Similarity=0.148 Sum_probs=22.9 Q ss_pred ECHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 2847899999999999987988999858 Q gi|254780622|r 13 CGSVAVYKSLDLIRRLRERGAVVIPVMT 40 (405) Q Consensus 13 tGsiaa~k~~~l~~~L~~~g~~V~vv~T 40 (405) +|+.+-+ +-.|.+.|.+.|++|+||+- T Consensus 16 vGGLgdv-v~~L~~aL~~~G~~V~Vi~P 42 (476) T PRK00654 16 TGGLGDV-VGALPKALAKLGHDVRVLLP 42 (476) T ss_pred CCCHHHH-HHHHHHHHHHCCCEEEEEEC T ss_conf 5749999-99999999976995999947 No 436 >pfam01266 DAO FAD dependent oxidoreductase. This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1. Probab=66.12 E-value=7 Score=19.04 Aligned_cols=53 Identities=19% Similarity=0.254 Sum_probs=27.3 Q ss_pred CHHHHHHHHHHHHCCCCEEEEECCC-CCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHH Q ss_conf 2788999999982588389984156-67765674675465778999999850588879974044 Q gi|254780622|r 218 GQQGHAIAKSLAYFGAEVILISGPV-SIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAV 280 (405) Q Consensus 218 Gk~G~~iA~~~~~~Ga~V~li~g~~-~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAV 280 (405) .+.-.++++++..+|+++..=+ ++ ++....+ . +.|.|.+. ...+|.+|.|+-. T Consensus 147 ~~~~~~l~~~~~~~G~~i~~~~-~V~~i~~~~~-~-~~v~t~~g-------~i~a~~VV~a~G~ 200 (309) T pfam01266 147 ARLLRALARAAEALGVEILEGT-EVTGLEREGG-G-VTVETADG-------EIRADKVVNAAGA 200 (309) T ss_pred HHHHHHHHHHHHHCCCEEECCC-EEEEEEEECC-E-EEEEECCC-------EECCCEEEECCCH T ss_conf 2436799999987796999176-8999999899-9-99998997-------0858999997774 No 437 >PRK10307 predicted glycosyl transferase; Provisional Probab=66.02 E-value=10 Score=18.00 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=24.7 Q ss_pred EEEEEEE------CHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 6999952------847899999999999987988999858 Q gi|254780622|r 7 KIALIMC------GSVAVYKSLDLIRRLRERGAVVIPVMT 40 (405) Q Consensus 7 ~Illgvt------Gsiaa~k~~~l~~~L~~~g~~V~vv~T 40 (405) ||++... |+++-| +-+|++.|.+.|++|+|+.+ T Consensus 2 rIl~vs~~y~P~~~G~~~~-~~~La~~L~~~GheV~Vit~ 40 (415) T PRK10307 2 KILVYGINYAPELTGIGKY-TGEMAEWLAARGHEVRVITA 40 (415) T ss_pred EEEEECCCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEEC T ss_conf 8999858489978879999-99999999978998999977 No 438 >PRK00711 D-amino acid dehydrogenase small subunit; Validated Probab=65.78 E-value=6.9 Score=19.05 Aligned_cols=68 Identities=12% Similarity=0.047 Sum_probs=34.1 Q ss_pred CCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHH Q ss_conf 42010102135762157727889999999825883899841566776567467546577899999985058887997404 Q gi|254780622|r 200 GPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSA 279 (405) Q Consensus 200 G~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAA 279 (405) |+.+.|-|-+- | ..+.-.++++++..+|+.+..=+.-..+. ..+-.+..|.|..+ ...+|.+|.||- T Consensus 188 Ga~~~p~d~~~---d--~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~-~~~~~v~~V~t~~g-------~i~ad~vV~AaG 254 (416) T PRK00711 188 GGLRLPNDETG---D--CQLFTQRLAALAEQLGVKFRFNTPVDGLL-VEGGRITGVQTGGG-------VITADAYVVALG 254 (416) T ss_pred EEEEECCCCEE---C--HHHHHHHHHHHHHHCCCCCCCCCCEEEEE-EECCEEEEEECCCC-------EEEEEEEEEECC T ss_conf 99996898706---6--79999999999985388620023158999-84998998853895-------575016999337 Q ss_pred H Q ss_conf 4 Q gi|254780622|r 280 V 280 (405) Q Consensus 280 V 280 (405) . T Consensus 255 a 255 (416) T PRK00711 255 S 255 (416) T ss_pred H T ss_conf 4 No 439 >TIGR02788 VirB11 P-type DNA transfer ATPase VirB11; InterPro: IPR014155 This entry contains VirB11, a protein that is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer . VirB11 is believed to be an ATPase and is a homologue of the P-like conjugation system TrbB protein and the Flp pilus system protein TadA .. Probab=65.68 E-value=1.7 Score=22.95 Aligned_cols=145 Identities=16% Similarity=0.211 Sum_probs=69.4 Q ss_pred CCCC--CHHHHHHHH-CCCCCEEEECCCCCH-H----HHHH-HHHHHHHHHHHHCCC-----CCCCCHHHHHHCCCCCCC Q ss_conf 2455--214666752-279968984056600-0----0038-899999998640001-----346521255310322333 Q gi|254780622|r 101 GMVY--DLASAILLA-KGDQPVLIAPAMNFM-M----WAKP-ATQRNVEILQKDGCY-----FIGPESGAMAESNGYGVG 166 (405) Q Consensus 101 GiaD--~llt~~~la-~~~~pi~iaPaMn~~-M----~~~p-~~~~nl~~L~~~g~~-----vi~P~~g~la~c~~~G~g 166 (405) .|++ +|+.+..|. +.+..+|+.||.... - ..-| .++..++.+++.|.+ |.-|+.+.+. T Consensus 61 ~is~y~~P~LSa~LP~G~RvQ~V~PPAc~~~eTvs~tIRKpS~~~~sL~dy~~~G~F~~ar~~~~~~~~~~~-------- 132 (328) T TIGR02788 61 SISEYENPILSATLPGGERVQIVIPPACENDETVSITIRKPSLVDLSLDDYEEKGFFDTARAVVVPASTELS-------- 132 (328) T ss_pred CCCCCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCC-------- T ss_conf 201022863788869994799980687589885899995264445547999627985447776314434434-------- Q ss_pred CCCCHHHHHHHHHHHHHCC--CCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHH-HHCCCCEEEEEC--C Q ss_conf 4345589999999863101--3200179778984042010102135762157727889999999-825883899841--5 Q gi|254780622|r 167 RMSEPCDIIRQITWLLYKS--KELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSL-AYFGAEVILISG--P 241 (405) Q Consensus 167 rl~e~~~I~~~~~~~~~~~--~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~-~~~Ga~V~li~g--~ 241 (405) +.-+++.+....--.+. +..-..+|+|+|.+| | |||||=+.=|--= .=.--.+..|-- - T Consensus 133 --d~~~~L~el~~~g~~~~Fl~~Ai~~~knIii~GG-T-------------gSGKTTf~kal~~~IP~~ER~iTIED~~E 196 (328) T TIGR02788 133 --DKDEELLELLDAGDIKEFLRLAIASRKNIIISGG-T-------------GSGKTTFLKALVKEIPKDERLITIEDTRE 196 (328) T ss_pred --HHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEC-C-------------CCHHHHHHHHHHHCCCCCCCEEEEEEEEC T ss_conf --6899999998628887999999873891999906-8-------------97189999999732762252788852011 Q ss_pred CCCCC-CCCEEEE---------EHHHHHHHHHHHHHCC Q ss_conf 66776-5674675---------4657789999998505 Q gi|254780622|r 242 VSIAD-PPNVMTI---------HVERAEDMLQEVLKAL 269 (405) Q Consensus 242 ~~~~~-~~~~~~i---------~v~t~~em~~~~~~~~ 269 (405) ..++- |..++.. .-.|+++++++|++.. T Consensus 197 ~~~~hhpN~V~L~ysk~v~~g~~~vt~~~Ll~scLRMr 234 (328) T TIGR02788 197 LFLPHHPNKVHLFYSKGVGQGSAKVTPKDLLESCLRMR 234 (328) T ss_pred CCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCC T ss_conf 47888986456553464234435689899999971177 No 440 >PRK05225 ketol-acid reductoisomerase; Validated Probab=65.30 E-value=10 Score=17.92 Aligned_cols=69 Identities=25% Similarity=0.303 Sum_probs=40.5 Q ss_pred CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCC Q ss_conf 88556999952847899999999999987988999858568630698999997479--7582076788778774300114 Q gi|254780622|r 3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNR--RVYTHLLSYKEGYESNHIQLAN 80 (405) Q Consensus 3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~--~v~~~~~~~~~~~~~~Hi~l~~ 80 (405) |+||+|++.=|||=-- .-.--|+..|.+|.+-+-+++-. -...++..++.+ +|.+ --++.. T Consensus 35 LKgKkI~IiG~GsQG~----aqaLNlRDSGldV~~~LR~~si~-~k~~Sw~~A~~~Gf~V~t------------~eeai~ 97 (489) T PRK05225 35 LKGKKIVIVGCGAQGL----NQGLNMRDSGLDISYALRKEAIA-EKRASWRKATENGFKVGT------------YEELIP 97 (489) T ss_pred HCCCEEEEECCCHHHH----HHHCCCCCCCCCEEEEECCCHHH-HHHHHHHHHHHCCCCCCC------------HHHHHH T ss_conf 5288599980365877----76524410588569995553033-416679999977996467------------899732 Q ss_pred CCCEEEEE Q ss_conf 46557884 Q gi|254780622|r 81 ECDLLVVA 88 (405) Q Consensus 81 ~aD~~iVa 88 (405) +||++++. T Consensus 98 ~ADvV~~L 105 (489) T PRK05225 98 QADLVVNL 105 (489) T ss_pred CCCEEEEE T ss_conf 35878870 No 441 >PTZ00052 thioredoxin reductase; Provisional Probab=65.22 E-value=4.7 Score=20.11 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=47.6 Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH-HE--ECC--EEEEECCC---------------CCHHHH Q ss_conf 23334345589999999863101320017977898404201-01--021--35762157---------------727889 Q gi|254780622|r 163 YGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTY-EP--LDP--MRYIANRS---------------SGQQGH 222 (405) Q Consensus 163 ~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~-E~--ID~--VR~ItN~S---------------SGk~G~ 222 (405) .|.|++-++..+--.+..- ......+..++++|-.|..- .| |+. -+.+||.. .|-.|. T Consensus 158 ~G~a~f~~~~tV~v~~~~~--~g~~~~i~a~~iIIATGS~P~iP~~ipg~~~~~ltS~~~l~l~~lP~~lvIIGgG~IG~ 235 (541) T PTZ00052 158 NGLAKLKDPHTVEYYLKGD--NSQEETITSKYILIATGCRPHIPEDVEGAIELSITSDDIFSLKKSPGKTLVVGASYVAL 235 (541) T ss_pred EEEEEEECCCEEEEEECCC--CCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCHHHH T ss_conf 8589983698789984258--88527999527998578887678887767630206532206534896289989869999 Q ss_pred HHHHHHHHCCCCEEEEEC Q ss_conf 999999825883899841 Q gi|254780622|r 223 AIAKSLAYFGAEVILISG 240 (405) Q Consensus 223 ~iA~~~~~~Ga~V~li~g 240 (405) ++|..+...|.+||++.. T Consensus 236 E~A~if~~lGs~VTi~~r 253 (541) T PTZ00052 236 ECAGFLNSLGFDVTVAVR 253 (541) T ss_pred HHHHHHHHCCCEEEEEEC T ss_conf 999999975985899953 No 442 >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Probab=65.18 E-value=9.5 Score=18.16 Aligned_cols=26 Identities=35% Similarity=0.397 Sum_probs=22.0 Q ss_pred ECHHHHHHHHHHHHHHHHCCCEEEEEE Q ss_conf 284789999999999998798899985 Q gi|254780622|r 13 CGSVAVYKSLDLIRRLRERGAVVIPVM 39 (405) Q Consensus 13 tGsiaa~k~~~l~~~L~~~g~~V~vv~ 39 (405) +||+..| +.+|++.|.+.|++|.|+. T Consensus 20 ~GG~e~~-v~~La~~L~~~GH~V~V~t 45 (398) T cd03800 20 TGGQNVY-VLELARALARLGHEVDIFT 45 (398) T ss_pred CCCHHHH-HHHHHHHHHHCCCEEEEEE T ss_conf 6887999-9999999998699699997 No 443 >PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed Probab=64.89 E-value=9.1 Score=18.30 Aligned_cols=37 Identities=24% Similarity=0.179 Sum_probs=31.8 Q ss_pred HEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 0102135762157727889999999825883899841 Q gi|254780622|r 204 EPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 204 E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) .+--+|+.+.=--.|.||.-||..+...|.+|+|+-- T Consensus 308 ~~~~~i~~v~ViGaG~MG~GIA~~~a~aG~~V~l~D~ 344 (715) T PRK11730 308 KDAKDVKQAAVLGAGIMGGGIAYQSASKGVPVIMKDI 344 (715) T ss_pred CCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEC T ss_conf 6677762799978771079999999957995799978 No 444 >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Probab=64.74 E-value=11 Score=17.85 Aligned_cols=28 Identities=29% Similarity=0.246 Sum_probs=22.7 Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEECHH Q ss_conf 84789999999999998798899985856 Q gi|254780622|r 14 GSVAVYKSLDLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 14 Gsiaa~k~~~l~~~L~~~g~~V~vv~T~~ 42 (405) ||++.+ +.+|++.|.++|++|.|+.+.. T Consensus 14 GG~~~~-~~~La~~L~~~GheV~Vit~~~ 41 (374) T cd03817 14 NGVATS-IRRLAEELEKRGHEVYVVAPSY 41 (374) T ss_pred CCHHHH-HHHHHHHHHHCCCEEEEEECCC T ss_conf 809999-9999999997799899997279 No 445 >cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea . Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio Probab=64.72 E-value=11 Score=17.85 Aligned_cols=29 Identities=14% Similarity=0.218 Sum_probs=16.7 Q ss_pred EEEEEEECHHHHHHHHHHHHHHHH-CCCEE Q ss_conf 699995284789999999999998-79889 Q gi|254780622|r 7 KIALIMCGSVAVYKSLDLIRRLRE-RGAVV 35 (405) Q Consensus 7 ~IllgvtGsiaa~k~~~l~~~L~~-~g~~V 35 (405) |||+.+.||-.+.++.+++..+.+ .++++ T Consensus 1 rILVpvd~s~~s~~al~~A~~la~~~~a~l 30 (132) T cd01988 1 RILVPVANPNTARDLLELAAALARAQNGEI 30 (132) T ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCEE T ss_conf 989972898899999999999998769989 No 446 >PRK11761 cysM cysteine synthase B; Provisional Probab=64.56 E-value=6.8 Score=19.09 Aligned_cols=50 Identities=22% Similarity=0.190 Sum_probs=26.6 Q ss_pred EEEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 5788411188898852024552146667522799689840566000003889999999864000134 Q gi|254780622|r 84 LLVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFI 150 (405) Q Consensus 84 ~~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi 150 (405) -.||.+.|.||=.-+| ..+....-+-+++.|. + +.++.++.++.+|..|+ T Consensus 64 ~~vveaSSGN~g~alA---------~~a~~~G~~~~iv~p~---~-----~s~~k~~~l~~~GAeVi 113 (296) T PRK11761 64 DTLIEATSGNTGIALA---------MAAAIKGYRMKLIMPE---N-----MSQERRAAMRAYGAELI 113 (296) T ss_pred CEEEEECCCCHHHHHH---------HHHHHCCCEEEEECCC---C-----CCHHHHHHHHHCCCCEE T ss_conf 8799937886799999---------9999819747996786---5-----78899999997499557 No 447 >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit; InterPro: IPR014215 This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by IPR014214 from INTERPRO. This protein is also known as SpoVFA.. Probab=64.52 E-value=5.6 Score=19.66 Aligned_cols=102 Identities=17% Similarity=0.299 Sum_probs=52.9 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEE--EEEHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCC Q ss_conf 72788999999982588389984156677656746--7546577899999985058887997404444432222101123 Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVM--TIHVERAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIK 294 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~--~i~v~t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kik 294 (405) =||+|.+||+.|...||+|..=+-... ....+- .++--...+|.+++. ++|++| ++- T Consensus 160 fGRtG~tiAr~f~aLGA~V~V~AR~~~--dlARI~E~g~~P~~~~~L~~~v~---e~DIvi-----------NTi----- 218 (288) T TIGR02853 160 FGRTGMTIARTFSALGARVSVGARSSA--DLARITEMGLEPVPLNKLEEKVA---EIDIVI-----------NTI----- 218 (288) T ss_pred CCCHHHHHHHHHHHCCCEEEEECCCHH--HHHHHHHHCCCCCCHHHHHHHHC---CCCEEE-----------ECC----- T ss_conf 470568999999726980575317836--78999996068827167887650---002477-----------067----- Q ss_pred CCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCC-CHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 345577510455218068988762148995899981141-23899999999974998999920 Q gi|254780622|r 295 RKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAET-QCIEQNAREKLLNKGADFIVSNC 356 (405) Q Consensus 295 k~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET-~~l~~~A~~Kl~~K~~D~IVAN~ 356 (405) -.|+-+.|+|+++ .++.++|=.+-.- +..-++|++ .|..++.|=- T Consensus 219 ---------PaLvlt~~~l~~l----p~~AviiDLAS~PGGtDF~yAk~----~Gi~A~LAPG 264 (288) T TIGR02853 219 ---------PALVLTKDVLSKL----PKHAVIIDLASKPGGTDFEYAKK----RGIKALLAPG 264 (288) T ss_pred ---------CCCCCCHHHHHHC----CCCCEEEEECCCCCCCCHHHHHH----CCCEEEECCC T ss_conf ---------6300365899526----85848997327848737698986----2982897187 No 448 >PRK05439 pantothenate kinase; Provisional Probab=64.52 E-value=7.1 Score=18.99 Aligned_cols=26 Identities=19% Similarity=0.213 Sum_probs=10.8 Q ss_pred CCCCHHHHH-HHHHHHHC---CCCEEEEEC Q ss_conf 577278899-99999825---883899841 Q gi|254780622|r 215 RSSGQQGHA-IAKSLAYF---GAEVILISG 240 (405) Q Consensus 215 ~SSGk~G~~-iA~~~~~~---Ga~V~li~g 240 (405) -+.||--.| +-++++.| .-.|.||+. T Consensus 95 VAVGKSTtARlLq~LL~r~~~~~~V~LvTT 124 (312) T PRK05439 95 VAVGKSTTARLLQALLSRWPEHPKVDLVTT 124 (312) T ss_pred EECCHHHHHHHHHHHHHCCCCCCCEEEEEC T ss_conf 102628899999999950789994589934 No 449 >PRK01184 hypothetical protein; Provisional Probab=64.46 E-value=6 Score=19.44 Aligned_cols=27 Identities=26% Similarity=0.350 Sum_probs=18.9 Q ss_pred EEEEECHHHHHHHHHHHHHHHHCCCEEE Q ss_conf 9995284789999999999998798899 Q gi|254780622|r 9 ALIMCGSVAVYKSLDLIRRLRERGAVVI 36 (405) Q Consensus 9 llgvtGsiaa~k~~~l~~~L~~~g~~V~ 36 (405) ++|+||+|++=|+ .++..|+++|+.|. T Consensus 3 iIGlTG~iGSGKs-tva~i~~e~G~~vi 29 (183) T PRK01184 3 IIIVTGMPGSGKG-EFSKIARELGIPVV 29 (183) T ss_pred EEEEECCCCCCHH-HHHHHHHHCCCEEE T ss_conf 9999689988789-99999997799399 No 450 >PTZ00300 pyruvate kinase; Provisional Probab=64.32 E-value=11 Score=17.80 Aligned_cols=71 Identities=13% Similarity=0.024 Sum_probs=40.2 Q ss_pred CCEEEEEECHHHHHHHHHCCCCCCEEE-----EEECCCCHHHHHHHHHHHHCC----CCEEEEECCCCCCCCCCCCCEEE Q ss_conf 510455218068988762148995899-----981141238999999999749----98999920577677777661189 Q gi|254780622|r 301 TMRIDLMENPDILKIIGHHQCRPSIVV-----GFAAETQCIEQNAREKLLNKG----ADFIVSNCILPDTGFVGKEWNKV 371 (405) Q Consensus 301 ~l~L~L~~~pdIL~~i~~~k~~~~~lV-----GFkaET~~l~~~A~~Kl~~K~----~D~IVAN~i~~~~~~fgsd~n~v 371 (405) ..-+-+.+++++...+.-.|.=..++. ++.-.+++.++.|.+.++++| =|.||.=.-.... ...+|.+ T Consensus 372 ~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~i~~a~~~~~~~g~~~~GD~vVvv~g~~~~---~G~TN~~ 448 (454) T PTZ00300 372 CPIVCVTTRLQTCRQLNITQGVESVFFDAERLGHDEGKEQRVAMGVGFAKSKGYVQSGDLMVVVHADHKV---KGYANQT 448 (454) T ss_pred CCEEEECCCHHHHHHHHEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC---CCCCCEE T ss_conf 9999989879999865660585999866634676569999999999999977998899989999348999---9767479 Q ss_pred EEE Q ss_conf 998 Q gi|254780622|r 372 SIV 374 (405) Q Consensus 372 ~li 374 (405) .++ T Consensus 449 ri~ 451 (454) T PTZ00300 449 RII 451 (454) T ss_pred EEE T ss_conf 999 No 451 >TIGR01426 MGT glycosyltransferase, MGT family; InterPro: IPR006326 These sequences belong to the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. ; GO: 0016758 transferase activity transferring hexosyl groups, 0016999 antibiotic metabolic process. Probab=64.21 E-value=5 Score=19.98 Aligned_cols=23 Identities=26% Similarity=0.329 Sum_probs=19.4 Q ss_pred HHHHHHHHHHCCCEEEEEECHHH Q ss_conf 99999999987988999858568 Q gi|254780622|r 21 SLDLIRRLRERGAVVIPVMTKSA 43 (405) Q Consensus 21 ~~~l~~~L~~~g~~V~vv~T~~A 43 (405) ++.++++|.+.|+.|+-..|+.= T Consensus 12 tL~v~~ELV~RGh~VTY~~t~ef 34 (429) T TIGR01426 12 TLGVVEELVARGHRVTYATTEEF 34 (429) T ss_pred CHHHHHHHHHCCCEEEEECCHHH T ss_conf 57899999845974663178889 No 452 >PRK06975 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed Probab=64.14 E-value=11 Score=17.78 Aligned_cols=35 Identities=40% Similarity=0.580 Sum_probs=20.5 Q ss_pred CCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 0179778984042010102135762157727889999999825883899841 Q gi|254780622|r 189 LLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 189 ~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) .+.||||||--|- -|| -.||+.+..|||+|.++.- T Consensus 136 ~v~gkrVLIvRG~---------------GGR--ElLaetL~~RGA~V~y~e~ 170 (653) T PRK06975 136 ALAGKRVLIVRGD---------------GGR--EWLAERLREAGAEVELVEA 170 (653) T ss_pred HCCCCEEEEEECC---------------CCH--HHHHHHHHHCCCEEEEEEE T ss_conf 5349979998278---------------537--9999999987980569978 No 453 >PRK06354 pyruvate kinase; Provisional Probab=64.07 E-value=11 Score=17.77 Aligned_cols=18 Identities=33% Similarity=0.344 Sum_probs=9.0 Q ss_pred CCCEEEECCCCCHHHHHH Q ss_conf 996898405660000038 Q gi|254780622|r 116 DQPVLIAPAMNFMMWAKP 133 (405) Q Consensus 116 ~~pi~iaPaMn~~M~~~p 133 (405) ++|+++|--|=..|-+|| T Consensus 276 gKPVI~ATQMLeSMi~np 293 (589) T PRK06354 276 GIPVITATQMLDSMQRNP 293 (589) T ss_pred CCCEEEEECCHHHHCCCC T ss_conf 997899815578753799 No 454 >cd06192 DHOD_e_trans_like FAD/NAD binding domain (electron transfer subunit) of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as NAD binding. NAD(P) binding domain of ferredoxin reductase-like proteins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal domain may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Ferredoxin is reduced in the final stage of photosystem I. The flavoprotein Ferredoxin-NADP+ reductase transfers electrons from reduced ferredoxin to FAD (formi Probab=63.90 E-value=11 Score=17.75 Aligned_cols=37 Identities=35% Similarity=0.531 Sum_probs=26.8 Q ss_pred CCEEEEEECCC-HHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC Q ss_conf 97789840420-10102135762157727889999999825883899841566 Q gi|254780622|r 192 GKRALVTSGPT-YEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS 243 (405) Q Consensus 192 gk~vlITaG~T-~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~ 243 (405) ++++|+-+||. .-|+ +.+|+++..+|.+|+++.|.-+ T Consensus 97 ~~~~llVaGG~GiaPl---------------~~l~~~l~~~g~~v~~i~g~r~ 134 (243) T cd06192 97 GGTVLLVAGGIGLAPL---------------LPIAKKLAANGNKVTVLAGAKK 134 (243) T ss_pred CCEEEEEECCCCHHHH---------------HHHHHHHHHCCCCEEEEEEECC T ss_conf 9769999567341659---------------9999999877996699999388 No 455 >PRK00805 putative deoxyhypusine synthase; Provisional Probab=63.73 E-value=11 Score=17.73 Aligned_cols=54 Identities=19% Similarity=0.161 Sum_probs=39.8 Q ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCC Q ss_conf 8556999952847899999999999987988999858568630698999997479758 Q gi|254780622|r 4 SGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVY 61 (405) Q Consensus 4 ~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~ 61 (405) ++.+|.|+.+|.+..-..-.+++.|.|+|. |.+|.|..|. +..+.++.+ +++-| T Consensus 52 ~~~tifLtlagam~saGlr~~i~~lIr~~~-Vd~IvtTgan--leeDi~~~~-g~~~y 105 (338) T PRK00805 52 EDVTIFMGLSGAMVPAGMRRIISYLIEERY-IDVLVSTGAN--IFHDICEAM-GFKHY 105 (338) T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCCC-EEEEECCCCC--CHHHHHHHC-CCCEE T ss_conf 897599963110016888999999998697-4599807875--127799870-85403 No 456 >pfam01175 Urocanase Urocanase. Probab=63.47 E-value=8.9 Score=18.36 Aligned_cols=136 Identities=23% Similarity=0.239 Sum_probs=73.3 Q ss_pred HHHCCCCCEEEECC---------CCCHHHHHHHHHHHHHHHHHHCCC-----------CCCCCHHHHHHCCCCCCCCCCC Q ss_conf 75227996898405---------660000038899999998640001-----------3465212553103223334345 Q gi|254780622|r 111 LLAKGDQPVLIAPA---------MNFMMWAKPATQRNVEILQKDGCY-----------FIGPESGAMAESNGYGVGRMSE 170 (405) Q Consensus 111 ~la~~~~pi~iaPa---------Mn~~M~~~p~~~~nl~~L~~~g~~-----------vi~P~~g~la~c~~~G~grl~e 170 (405) ++..+++|+=++|+ -|.+|--|=++.++++.|...|+. .|+|+- .+ .|. T Consensus 70 L~vqSG~Pvg~f~th~~APRVliaN~~lVp~wa~~~~f~~l~~~Gl~mYGQMTAGSw~YIG~QG-Iv-----qGT----- 138 (545) T pfam01175 70 LLVQSGKPVGVFRTHPDAPRVLIANSNLVPKWANWEHFNELEAKGLTMYGQMTAGSWIYIGTQG-IV-----QGT----- 138 (545) T ss_pred EEEECCCCCEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHCCCCCCEEEEECCCC-EE-----CCH----- T ss_conf 9997598416546899998499987840778789899999986473121464432048975620-22-----048----- Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC------------------HHEECCE--------EEEE----------- Q ss_conf 58999999986310132001797789840420------------------1010213--------5762----------- Q gi|254780622|r 171 PCDIIRQITWLLYKSKELLLKGKRALVTSGPT------------------YEPLDPM--------RYIA----------- 213 (405) Q Consensus 171 ~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T------------------~E~ID~V--------R~It----------- 213 (405) -+.+.....+++. .+|+|| +.+|+|-. ...+||- ||+. T Consensus 139 yeT~~~aark~~g----~~L~Gk-~~lTaGLGGMgGAQPlA~~mag~v~i~~Evd~~ri~kR~~~gylD~~~~~Ldeai~ 213 (545) T pfam01175 139 YETFAAAARKHFG----GDLAGK-LILTAGLGGMGGAQPLAATMAGAVCLAVEVDESRIDKRLETGYLDEVADDLDEALA 213 (545) T ss_pred HHHHHHHHHHHCC----CCCCCC-EEEECCCCCCCCCCHHHHHHCCCEEEEEEECHHHHHHHHHCCCCEEEECCHHHHHH T ss_conf 9999999998739----886771-79940677665433577875276289998389999999867970566179999999 Q ss_pred ----------CCCCCHHH--HHHHHHHHHCCCCEEEEECCCCCCCCCC--EE-EEEHHHHHHHH Q ss_conf ----------15772788--9999999825883899841566776567--46-75465778999 Q gi|254780622|r 214 ----------NRSSGQQG--HAIAKSLAYFGAEVILISGPVSIADPPN--VM-TIHVERAEDML 262 (405) Q Consensus 214 ----------N~SSGk~G--~~iA~~~~~~Ga~V~li~g~~~~~~~~~--~~-~i~v~t~~em~ 262 (405) ..|=|-.| ..|-+++..+|..+.+++..++...|-+ +. -+.++.+++|. T Consensus 214 ~~~~A~~~~~~iSIgl~GNaadv~e~l~~r~i~pDlvTDQTSaHDPl~GY~P~G~s~eEa~~lr 277 (545) T pfam01175 214 RAKEARAAGEPLSIGLLGNAADVLPELVRRGIRPDLVTDQTSAHDPLNGYLPAGYTLEEAAELR 277 (545) T ss_pred HHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH T ss_conf 9999987498438998242999999999669986377776545585336488999999999998 No 457 >PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Probab=63.47 E-value=7.3 Score=18.90 Aligned_cols=63 Identities=16% Similarity=0.174 Sum_probs=30.5 Q ss_pred HHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC Q ss_conf 9999998798899985856863069899999747975820767887787743001144655788411 Q gi|254780622|r 24 LIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECDLLVVAPA 90 (405) Q Consensus 24 l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD~~iVaPa 90 (405) .+|.|.+.|++|.+.=.+....+. ...+.+....+-... +.. ....++-.+-..+|++|+-|. T Consensus 15 ~a~~L~~~G~~v~~~D~~~~~~~~--~~~~~L~~~gi~~~~-g~~-~~~~~~~~~~~~~d~vV~SPG 77 (459) T PRK02705 15 AARLLKAQGWEVVVSERNDSPELL--ERQQELEQEGITVEL-GKP-LELESFQPWLDQPDLVVVSPG 77 (459) T ss_pred HHHHHHHCCCEEEEEECCCCCCHH--HHHHHHHHCCCEEEE-CCC-CCCCCHHHHCCCCCEEEECCC T ss_conf 999999789959999898992347--899999875986981-676-664301331167888998996 No 458 >PRK05414 urocanate hydratase; Provisional Probab=63.41 E-value=8.8 Score=18.40 Aligned_cols=122 Identities=22% Similarity=0.244 Sum_probs=69.0 Q ss_pred HHHCCCCCEEEECC---------CCCHHHHHHHHHHHHHHHHHHCCC-----------CCCCCHHHHHHCCCCCCCCCCC Q ss_conf 75227996898405---------660000038899999998640001-----------3465212553103223334345 Q gi|254780622|r 111 LLAKGDQPVLIAPA---------MNFMMWAKPATQRNVEILQKDGCY-----------FIGPESGAMAESNGYGVGRMSE 170 (405) Q Consensus 111 ~la~~~~pi~iaPa---------Mn~~M~~~p~~~~nl~~L~~~g~~-----------vi~P~~g~la~c~~~G~grl~e 170 (405) ++..+++|+=++|+ -|.+|--|=++.+++++|...|+. .|+|+- .+ .|. T Consensus 81 L~vqSG~Pvg~f~th~~aPRVliaN~~lVp~wa~~~~f~~l~~~Gl~~YGQMTAGsw~YIG~QG-Iv-----qGT----- 149 (558) T PRK05414 81 LLVQSGKPVGVFKTHPDAPRVLIANSNLVPHWANWEHFNELDAKGLAMYGQMTAGSWIYIGSQG-IV-----QGT----- 149 (558) T ss_pred EEEECCCCCEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHCCCCCCEEEEECCCC-EE-----CCH----- T ss_conf 9997598416556899998499986831678789899998876483121364432058976620-22-----148----- Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCC------------------HHEECCEE--------EEE----------- Q ss_conf 58999999986310132001797789840420------------------10102135--------762----------- Q gi|254780622|r 171 PCDIIRQITWLLYKSKELLLKGKRALVTSGPT------------------YEPLDPMR--------YIA----------- 213 (405) Q Consensus 171 ~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T------------------~E~ID~VR--------~It----------- 213 (405) -+.++....+++. .+|+|| +.+|+|-. ...+||-| |+. T Consensus 150 yeT~~~aark~~g----~~L~Gk-~~vTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri~kR~~~gylD~~~~~Ldeai~ 224 (558) T PRK05414 150 YETFVEAGRQHFG----GDLAGR-LILTAGLGGMGGAQPLAATMAGAVCLAVEVDESRIDKRLRTGYVDEKADDLDEALA 224 (558) T ss_pred HHHHHHHHHHHCC----CCCCCC-EEEECCCCCCCCCCHHHHHHCCCEEEEEEECHHHHHHHHHCCCCEEECCCHHHHHH T ss_conf 9999999998638----886771-89841777665433567875276289998389999999866971244178999999 Q ss_pred ----------CCCCCHHH--HHHHHHHHHCCCCEEEEECCCCCCCCC Q ss_conf ----------15772788--999999982588389984156677656 Q gi|254780622|r 214 ----------NRSSGQQG--HAIAKSLAYFGAEVILISGPVSIADPP 248 (405) Q Consensus 214 ----------N~SSGk~G--~~iA~~~~~~Ga~V~li~g~~~~~~~~ 248 (405) ..|=|-.| ..|-+++..+|..+.+++..++...|- T Consensus 225 ~~~~A~~~k~~iSIgl~GNaadl~~~l~~r~i~pDlvTDQTSaHDPl 271 (558) T PRK05414 225 LAEEAKAAGEPVSIGLLGNAADVLPELVRRGIRPDLVTDQTSAHDPL 271 (558) T ss_pred HHHHHHHCCCCEEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCC T ss_conf 99999863886068762239999999995799751677765455842 No 459 >PRK09183 transposase/IS protein; Provisional Probab=63.30 E-value=11 Score=17.83 Aligned_cols=33 Identities=15% Similarity=0.188 Sum_probs=24.8 Q ss_pred EEEEECCCCCHHHHHH--HHHHHHCCCCEEEEECC Q ss_conf 3576215772788999--99998258838998415 Q gi|254780622|r 209 MRYIANRSSGQQGHAI--AKSLAYFGAEVILISGP 241 (405) Q Consensus 209 VR~ItN~SSGk~G~~i--A~~~~~~Ga~V~li~g~ 241 (405) |=++.+..+||+-.|+ +.++..+|+.|.++..+ T Consensus 104 vil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~ 138 (258) T PRK09183 104 IVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTTAA 138 (258) T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHH T ss_conf 79989999868999999999999879939997899 No 460 >pfam03853 YjeF_N YjeF-related protein N-terminus. Probab=63.15 E-value=11 Score=17.66 Aligned_cols=38 Identities=39% Similarity=0.516 Sum_probs=32.0 Q ss_pred CCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 179778984042010102135762157727889999999825883899841 Q gi|254780622|r 190 LKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 190 l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) ..+++|+|-+|+- --|--|+++|+.+..+|++|+++.- T Consensus 26 ~~~~~v~il~G~G-------------NNGGDGlv~Ar~L~~~g~~V~v~~~ 63 (170) T pfam03853 26 PAGKRVLVLCGPG-------------NNGGDGLAAARHLAQRGYKVTVLLL 63 (170) T ss_pred CCCCEEEEEECCC-------------CCHHHHHHHHHHHHHCCCCEEEEEE T ss_conf 7788699998799-------------8728899999999987990799996 No 461 >TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC; InterPro: IPR011967 This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring . The sequences included in this entry are all found in possible operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN . Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. . Probab=63.11 E-value=4.7 Score=20.11 Aligned_cols=23 Identities=22% Similarity=0.338 Sum_probs=14.2 Q ss_pred CCEEEEEECCHHHHHHHHCCCCC Q ss_conf 65578841118889885202455 Q gi|254780622|r 82 CDLLVVAPASANFIAHVAHGMVY 104 (405) Q Consensus 82 aD~~iVaPaTaNtiaK~A~GiaD 104 (405) +|.+|-.=.|.=+|.-+|.|++. T Consensus 112 ad~iiasNTSSlSIta~AAglar 134 (508) T TIGR02279 112 ADAIIASNTSSLSITALAAGLAR 134 (508) T ss_pred HHHHHHHCHHHHHHHHHHHHHCC T ss_conf 01525623257779999973138 No 462 >PRK03971 putative deoxyhypusine synthase; Provisional Probab=62.76 E-value=10 Score=17.92 Aligned_cols=38 Identities=13% Similarity=0.093 Sum_probs=20.6 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHH Q ss_conf 569999528478999999999999879889998585686 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQ 44 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~ 44 (405) .+|.|+.||++-.-..-++++.|.|+|. |.+|.|..|. T Consensus 67 ~tifL~~tg~misaGlr~ii~~Li~~~~-VD~iVtTgg~ 104 (334) T PRK03971 67 ATVFLGYTSNIVSSGLREIIAYLVKEKK-VDVIVTTAGG 104 (334) T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHCC-EEEEEECCCC T ss_conf 6699975431002217999999998286-2089805886 No 463 >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Probab=62.68 E-value=12 Score=17.61 Aligned_cols=27 Identities=26% Similarity=0.434 Sum_probs=22.2 Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 8478999999999999879889998585 Q gi|254780622|r 14 GSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 14 Gsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) ||++ ..+.+|++.|.+.|++|.++.+. T Consensus 14 gG~~-~~~~~la~~L~~~Gh~V~v~t~~ 40 (394) T cd03794 14 GGGA-FRTTELAEELVKRGHEVTVITGS 40 (394) T ss_pred CCHH-HHHHHHHHHHHHCCCEEEEEECC T ss_conf 8299-99999999999779979999547 No 464 >PRK04527 argininosuccinate synthase; Provisional Probab=62.45 E-value=12 Score=17.58 Aligned_cols=38 Identities=32% Similarity=0.418 Sum_probs=29.4 Q ss_pred CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHH Q ss_conf 88556999952847899999999999987988999858568 Q gi|254780622|r 3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSA 43 (405) Q Consensus 3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A 43 (405) |+.|||+|+-||+.- +--.+.+|++.|++|.+++-.-+ T Consensus 1 M~~kkVvLAySGGLD---TSv~l~wL~e~g~~Vi~~~ad~G 38 (397) T PRK04527 1 MSTKDIVLAFSGGLD---TSFCIPYLQERGYAVHTVFADTG 38 (397) T ss_pred CCCCEEEEEECCCCH---HHHHHHHHHHCCCCEEEEEEECC T ss_conf 998759999089728---99999999875994799999789 No 465 >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed Probab=62.28 E-value=12 Score=17.56 Aligned_cols=148 Identities=18% Similarity=0.214 Sum_probs=62.2 Q ss_pred CCCCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHH---H----HH-----HCCHHHHH-HHHCCCCCCCCCCCCC Q ss_conf 8855699995284789999999999998798899985856---8----63-----06989999-9747975820767887 Q gi|254780622|r 3 LSGKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS---A----QK-----FITPLIVG-AISNRRVYTHLLSYKE 69 (405) Q Consensus 3 l~~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~---A----~~-----fi~~~~l~-~lt~~~v~~~~~~~~~ 69 (405) +-|++|.+.=+|=.+ --++-..++.|.+|.++-... | .+ |-.+.++. ++....|+|-.++ T Consensus 5 ~p~~tIGIlGgGQLg----rMla~aA~~lG~~v~vldp~~~~PA~~va~~~~~~~~~D~~al~~fa~~~DviT~E~E--- 77 (377) T PRK06019 5 LPGKTIGIIGGGQLG----RMLALAAAPLGYKVIVLDPDADCPAAQVADRVIVADYDDVAALRELAEQCDVITYEFE--- 77 (377) T ss_pred CCCCEEEEECCCHHH----HHHHHHHHHCCCEEEEECCCCCCCHHHHCCEEEECCCCCHHHHHHHHHCCCEEEECCC--- T ss_conf 999999998786899----9999999978998999848984984783784898688989999999845999997817--- Q ss_pred CCCCCCCCC---CCCCCEEEEEECCHHHHHHHHCCCCCC-HHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHH-HHH Q ss_conf 787743001---144655788411188898852024552-146667522799689840566000003889999999-864 Q gi|254780622|r 70 GYESNHIQL---ANECDLLVVAPASANFIAHVAHGMVYD-LASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEI-LQK 144 (405) Q Consensus 70 ~~~~~Hi~l---~~~aD~~iVaPaTaNtiaK~A~GiaD~-llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~-L~~ 144 (405) ||.. ..-.+-.-|.|.+ +++. ++-| +.--.++...+-| .+|..-- + ..+.+.. +.+ T Consensus 78 -----nI~~~~L~~le~~~~v~P~~-~al~-----i~QdR~~eK~~l~~lgip--tapf~~v---~---s~~dl~~~~~~ 138 (377) T PRK06019 78 -----NVPAEALDLLAARVPVPPGP-DALA-----IAQDRLTEKQFLDELGIP--VAPFALV---D---SAEDLDAAIAD 138 (377) T ss_pred -----CCCHHHHHHHHHCCCCCCCH-HHHH-----HHHHHHHHHHHHHHCCCC--CCCEEEE---C---CHHHHHHHHHH T ss_conf -----68999999997089668798-9999-----886279999999976999--8880671---8---99999999997 Q ss_pred HCC-CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH Q ss_conf 000-13465212553103223334345589999999 Q gi|254780622|r 145 DGC-YFIGPESGAMAESNGYGVGRMSEPCDIIRQIT 179 (405) Q Consensus 145 ~g~-~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~ 179 (405) .|+ .|+.+..|. ++..|.-++-+++++..... T Consensus 139 lg~P~vlKt~~~G---YDGKGq~~i~s~~dl~~a~~ 171 (377) T PRK06019 139 LGLPAVLKTRRGG---YDGKGQWVLRSEADLDAAWA 171 (377) T ss_pred CCCCEEEECCCCC---CCCCCCEEECCHHHHHHHHH T ss_conf 2997699513346---18870189778889999998 No 466 >PRK03333 coaE dephospho-CoA kinase/unknown domain fusion protein; Provisional Probab=62.18 E-value=7.5 Score=18.81 Aligned_cols=38 Identities=26% Similarity=0.330 Sum_probs=25.6 Q ss_pred EEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECH-HHHHHCC Q ss_conf 9999528478999999999999879889998585-6863069 Q gi|254780622|r 8 IALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTK-SAQKFIT 48 (405) Q Consensus 8 IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~-~A~~fi~ 48 (405) ..+|+||||++-|+. +.+.|...|+.| |=.+ -|.+.+. T Consensus 2 ~~IGLTGGIgsGKSt-v~~~l~~~G~~v--iDaD~iar~v~~ 40 (394) T PRK03333 2 LRIGLTGGIGAGKST-VSATLAQLGAVV--VDGDVLAREVVE 40 (394) T ss_pred EEEEEECCCCCCHHH-HHHHHHHCCCEE--EEHHHHHHHHHC T ss_conf 499830675557999-999999879949--985799999943 No 467 >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] Probab=62.07 E-value=12 Score=17.54 Aligned_cols=79 Identities=16% Similarity=0.195 Sum_probs=48.2 Q ss_pred CCCCCCHHHHHHHHC-CCCCEEEE----CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH---CCCCCCCCCCCH Q ss_conf 024552146667522-79968984----0566000003889999999864000134652125531---032233343455 Q gi|254780622|r 100 HGMVYDLASAILLAK-GDQPVLIA----PAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAE---SNGYGVGRMSEP 171 (405) Q Consensus 100 ~GiaD~llt~~~la~-~~~pi~ia----PaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~---c~~~G~grl~e~ 171 (405) +|.++.+-+....+. ...||.++ |-|-..| +|.+++.--..|++.|+..+-+....... --+.|.|.+.+- T Consensus 10 ~Gp~G~le~~~~~~~~~~~~iAli~HPHPl~gGtm-~nkvv~~la~~l~~~G~atlRfNfRgvG~S~G~fD~GiGE~~Da 88 (210) T COG2945 10 NGPAGRLEGRYEPAKTPAAPIALICHPHPLFGGTM-NNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDA 88 (210) T ss_pred CCCCCCCEECCCCCCCCCCCEEEECCCCCCCCCCC-CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHH T ss_conf 27754211033787788775279638981226766-77999999999986896389640332567778656885528889 Q ss_pred HHHHHHHH Q ss_conf 89999999 Q gi|254780622|r 172 CDIIRQIT 179 (405) Q Consensus 172 ~~I~~~~~ 179 (405) ...++++. T Consensus 89 ~aaldW~~ 96 (210) T COG2945 89 AAALDWLQ 96 (210) T ss_pred HHHHHHHH T ss_conf 99999998 No 468 >PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed Probab=61.93 E-value=12 Score=17.52 Aligned_cols=37 Identities=35% Similarity=0.470 Sum_probs=26.1 Q ss_pred CCEEE-EEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC Q ss_conf 97789-84042010102135762157727889999999825883899841566 Q gi|254780622|r 192 GKRAL-VTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS 243 (405) Q Consensus 192 gk~vl-ITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~ 243 (405) ++++| |-+|=-.-|+ +.+++++..+|.+|+++.|--+ T Consensus 100 ~~~~llVaGGiGiAPl---------------~~l~~~l~~~~~~v~~i~G~r~ 137 (248) T PRK00054 100 GGKVLLVGGGIGVAPL---------------YELAKQLKAKGVEVTTVLGART 137 (248) T ss_pred CCEEEEEECCCCCCCH---------------HHHHHHHHHCCCCEEEEEECCC T ss_conf 9619999676745768---------------9999999972997799997588 No 469 >COG1157 FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] Probab=61.92 E-value=12 Score=17.52 Aligned_cols=137 Identities=20% Similarity=0.283 Sum_probs=84.0 Q ss_pred EEEEECCHHHHHHHHCCCCCCHHHH-HHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC--------CCHH Q ss_conf 7884111888988520245521466-675227996898405660000038899999998640001346--------5212 Q gi|254780622|r 85 LVVAPASANFIAHVAHGMVYDLASA-ILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIG--------PESG 155 (405) Q Consensus 85 ~iVaPaTaNtiaK~A~GiaD~llt~-~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~--------P~~g 155 (405) .+-.|.+.+.+++.-+|...-+=.. ..-.....|+.-.| -||..++-++.--.-|+..|+ -+.| T Consensus 95 ~~~v~~g~~lLGRVld~~G~plDg~~~~~~~~~~~l~~~p-------p~pm~R~~I~~~l~tGVRaIDgllT~G~GQRiG 167 (441) T COG1157 95 PLSVPVGDALLGRVLDGLGRPLDGGGLPDGTERRPLDAPP-------PNPLKRRPIEEPLDTGVRAIDGLLTCGKGQRIG 167 (441) T ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCHHCCCCCCCCCCCCEEEECCCCCCCCCEEE T ss_conf 5423668666541006688857789999876323145799-------782102654664545614440100224674678 Q ss_pred HHHHCCCCCCCCCC---------------------CHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEEC Q ss_conf 55310322333434---------------------558999999986310132001797789840420101021357621 Q gi|254780622|r 156 AMAESNGYGVGRMS---------------------EPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIAN 214 (405) Q Consensus 156 ~la~c~~~G~grl~---------------------e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN 214 (405) .+| ..|.||-- .-.++-+++++.+.... | .|.|+|-|-.-..++..++ T Consensus 168 IFA---gsGVGKStLLgMiar~t~aDv~ViaLIGERGREVrEFIE~~Lg~eg---l-~rsViVvATSD~s~l~R~~---- 236 (441) T COG1157 168 IFA---GSGVGKSTLLGMIARNTEADVNVIALIGERGREVREFIEKDLGEEG---L-KRSVVVVATSDESALMRLK---- 236 (441) T ss_pred EEE---CCCCCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHCCHHH---C-CCEEEEEECCCCCHHHHHH---- T ss_conf 871---6998689999999624669879999760664059999998602330---3-5269999789889899988---- Q ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 577278899999998258838998415 Q gi|254780622|r 215 RSSGQQGHAIAKSLAYFGAEVILISGP 241 (405) Q Consensus 215 ~SSGk~G~~iA~~~~~~Ga~V~li~g~ 241 (405) -+.+..+||++|+.+|.+|-|+..+ T Consensus 237 --aa~~At~IAEyFRDqG~~VLL~mDS 261 (441) T COG1157 237 --AAFTATTIAEYFRDQGKRVLLIMDS 261 (441) T ss_pred --HHHHHHHHHHHHHHCCCEEEEEEEC T ss_conf --8999999999998679859999613 No 470 >PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional Probab=61.79 E-value=12 Score=17.51 Aligned_cols=32 Identities=9% Similarity=0.086 Sum_probs=15.6 Q ss_pred HHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH Q ss_conf 99986400013465212553103223334345589999999 Q gi|254780622|r 139 VEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQIT 179 (405) Q Consensus 139 l~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~ 179 (405) .+..+..|..+..= +.+.|+-+++++|-+.+. T Consensus 96 ~~ia~~~g~~v~~l---------~~~~g~~~~~~~ve~~L~ 127 (368) T PRK13479 96 AKIAEYLGIAHVVL---------DTGEDEPPDAAAVEAALA 127 (368) T ss_pred HHHHHHHCCCEEEE---------ECCCCCCCCHHHHHHHHH T ss_conf 99999819975998---------789999889999999997 No 471 >PRK00048 dihydrodipicolinate reductase; Provisional Probab=61.46 E-value=12 Score=17.47 Aligned_cols=16 Identities=31% Similarity=0.322 Sum_probs=8.1 Q ss_pred HHHHHHHHHHHHCCCC Q ss_conf 8999999986400013 Q gi|254780622|r 134 ATQRNVEILQKDGCYF 149 (405) Q Consensus 134 ~~~~nl~~L~~~g~~v 149 (405) .+.+|++...+.|.-+ T Consensus 81 ~~~~~~~~~~~~~~~~ 96 (265) T PRK00048 81 ATLENLEFALEHGKPL 96 (265) T ss_pred HHHHHHHHHHHCCCCE T ss_conf 9999999999749977 No 472 >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. Probab=61.39 E-value=12 Score=17.46 Aligned_cols=31 Identities=16% Similarity=0.075 Sum_probs=21.9 Q ss_pred EEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHH Q ss_conf 99952847899999999999987988999858568 Q gi|254780622|r 9 ALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSA 43 (405) Q Consensus 9 llgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A 43 (405) +.|-||-|- -.+++.|...|+.|++.....+ T Consensus 4 VtGATG~iG----~~v~~~L~~~g~~v~~~~R~~~ 34 (285) T TIGR03649 4 LTGGTGKTA----SRIARLLQAASVPFLVASRSSS 34 (285) T ss_pred EECCCCHHH----HHHHHHHHHCCCCEEEEECCHH T ss_conf 998998189----9999999868997899958856 No 473 >TIGR01584 citF citrate lyase, alpha subunit; InterPro: IPR006472 These sequences, from both Gram-positive and Gram-negative bacteria, represent the alpha subunit of the holoenzyme citrate lyase composed of alpha (2.8.3.10 from EC), beta, and acyl carrier protein subunits in a stoichiometric relationship of 6:6:6. Citrate lyase is an enzyme which converts citrate to oxaloacetate. In bacteria, this reaction is involved in citrate fermentation. The alpha subunit catalyzes the reaction Acetyl-CoA + citrate = acetate + (3S)-citryl-CoA. The protein from Lactococcus lactis subsp. lactis has been experimentally characterised . ; GO: 0008814 citrate CoA-transferase activity, 0006084 acetyl-CoA metabolic process, 0005737 cytoplasm, 0009346 citrate lyase complex. Probab=61.33 E-value=12 Score=17.53 Aligned_cols=130 Identities=25% Similarity=0.329 Sum_probs=79.3 Q ss_pred CCEEEEEECCCHHEECCEEEEECCC---------------CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHH Q ss_conf 9778984042010102135762157---------------7278899999998258838998415667765674675465 Q gi|254780622|r 192 GKRALVTSGPTYEPLDPMRYIANRS---------------SGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVE 256 (405) Q Consensus 192 gk~vlITaG~T~E~ID~VR~ItN~S---------------SGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~ 256 (405) |+==+|-+|-+ +| +|=||.-++ -|-|||||-.+-|. =.|.+|+-.. -+.|+... T Consensus 130 GRarave~Ge~--~I-DVAFLG~P~~De~GNaNG~~GKs~cGSLGYA~vDA~YA--D~Vv~iTd~l--v~YPn~Pa---- 198 (496) T TIGR01584 130 GRARAVESGEL--KI-DVAFLGVPCCDEMGNANGITGKSKCGSLGYAIVDAQYA--DKVVLITDEL--VPYPNLPA---- 198 (496) T ss_pred CEEEEEECCCC--EE-EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC--CEEEEEECCC--CCCCCCCE---- T ss_conf 72778824880--56-41020788873025677888765666513566523563--9899830455--88858760---- Q ss_pred HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCC-----CCCCEEEEEEC Q ss_conf 7789999998505888799740444443222210112334557751045521806898876214-----89958999811 Q gi|254780622|r 257 RAEDMLQEVLKALPVDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQ-----CRPSIVVGFAA 331 (405) Q Consensus 257 t~~em~~~~~~~~~~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k-----~~~~~lVGFka 331 (405) -.+..+.|+++-.=||.| |.+...| ..++..+|+=|. |++.- .-+=+-=||.. T Consensus 199 --------SI~Q~~VD~vV~vd~vGd--P~kI~sG-----------AtR~t~dPkeLl-IA~~~~~VI~aSGYfKdGFs~ 256 (496) T TIGR01584 199 --------SIKQTQVDYVVKVDAVGD--PKKIGSG-----------ATRFTKDPKELL-IAKKAADVIVASGYFKDGFSL 256 (496) T ss_pred --------EEECCCCCEEEEEEEECC--CCCEECC-----------CCCCCCCCHHHH-HHHHHHHEEEECCCCCCCCEE T ss_conf --------120033314899834239--8850013-----------300689867888-864230002226831377156 Q ss_pred CCCH---HH---HHHHHHHHHCCCCEEEE Q ss_conf 4123---89---99999999749989999 Q gi|254780622|r 332 ETQC---IE---QNAREKLLNKGADFIVS 354 (405) Q Consensus 332 ET~~---l~---~~A~~Kl~~K~~D~IVA 354 (405) ||+. .+ .-.++||.++|.-+=.+ T Consensus 257 QtGtGGAaLAVtrfL~e~M~~~NikA~fG 285 (496) T TIGR01584 257 QTGTGGAALAVTRFLKEKMIEKNIKASFG 285 (496) T ss_pred ECCCHHHHHHHHHHHHHHHHHHCCEEEEC T ss_conf 53631379999998889888609507641 No 474 >pfam06258 DUF1022 Protein of unknown function (DUF1022). This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown. Probab=61.30 E-value=12 Score=17.45 Aligned_cols=128 Identities=15% Similarity=0.148 Sum_probs=60.7 Q ss_pred CCCCEEEEE-ECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHC Q ss_conf 179778984-0420101021357621577278899999998258838998415667765674675465778999999850 Q gi|254780622|r 190 LKGKRALVT-SGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKA 268 (405) Q Consensus 190 l~gk~vlIT-aG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~ 268 (405) +...+|+|- +|+++-+. .+...--+++..|.+.+...|..+.+..++ .|.+++.+.+.+. T Consensus 141 ~~~p~i~vLIGG~sk~~~-----~~~~~~~~l~~~i~~l~~~~~~~l~it~SR--------------RTP~~~~~~l~~~ 201 (308) T pfam06258 141 LPRPRVAVLVGGPSKHFR-----WDADAARRLLEQLQALLEAYGGSLLITTSR--------------RTPEAAEAALRKL 201 (308) T ss_pred CCCCEEEEEECCCCCCCC-----CCHHHHHHHHHHHHHHHHHCCCEEEEEECC--------------CCCHHHHHHHHHH T ss_conf 778769999655787888-----899999999999999998779729999468--------------8969999999986 Q ss_pred CC-C-CEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCC-EEEEEECCCC-HHHHHHHHHH Q ss_conf 58-8-87997404444432222101123345577510455218068988762148995-8999811412-3899999999 Q gi|254780622|r 269 LP-V-DIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPS-IVVGFAAETQ-CIEQNAREKL 344 (405) Q Consensus 269 ~~-~-D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~-~lVGFkaET~-~l~~~A~~Kl 344 (405) +. . .+++. |=..+++..+=+..+ + ...=|+|=..-+++--.-.+ +.| |.++.. .=.++-.+.| T Consensus 202 ~~~~~~~~~~-----~~~~~Npy~~~L~~A---d----~iiVT~DSvSMisEA~~tGkPV~i-~~l~~~~~r~~~f~~~L 268 (308) T pfam06258 202 LGPRPGLYVW-----DGTGPNPYFGFLAWA---D----AVVVTADSVSMVSEAAATGAPVGV-LPLEGKRGKFARFHDSL 268 (308) T ss_pred HCCCCEEEEC-----CCCCCCHHHHHHHHC---C----EEEEECCHHHHHHHHHHCCCCEEE-EECCCCCHHHHHHHHHH T ss_conf 0899728982-----798864589999858---8----689906718899999864997799-96776665999999999 Q ss_pred HHCCC Q ss_conf 97499 Q gi|254780622|r 345 LNKGA 349 (405) Q Consensus 345 ~~K~~ 349 (405) .+.|. T Consensus 269 ~~~g~ 273 (308) T pfam06258 269 EERGR 273 (308) T ss_pred HHCCC T ss_conf 98799 No 475 >TIGR01043 ATP_syn_A_arch ATP synthase archaeal, A subunit; InterPro: IPR005726 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (F-, V- and A-ATPases contain rotary motors) and in the type of ions they transport , . F-ATPases (F1F0-ATPases) in mitochondria, chloroplasts and bacterial plasma membranes are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases) are primarily found in eukaryotic vacuoles, catalysing ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases) are found in Archaea and function like F-ATPases. P-ATPases (E1E2-ATPases) are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. A-ATPases (or A1A0-ATPase) (3.6.3.14 from EC) are found exclusively in Archaea and display a close resemblance in structure and subunit composition with V-ATPases, although their function in both ATP synthesis and ATP hydrolysis is closer to that of F-ATPases . A-ATPases are composed of two linked complexes: the A1 complex consisting of seven subunits contains the catalytic core that synthesizes/hydrolyses ATP, while the A0 complex consisting of at least two subunits forms the membrane-spanning pore . The rotary motor in A-ATPases is composed of only two subunits, the stator subunit I and the rotor subunit C . A-ATPases may have arisen as an adaptation to the different cellular needs and the more extreme environmental conditions faced by Archaeal species. This entry represents the alpha subunit from the A1 complex of A-ATPases. The A1 complex contains three copies each of subunits alpha (or A) and beta (or B) (IPR005724 from INTERPRO), both of which form the headpiece that participates in nucleotide binding. However, only the alpha subunit is catalytic, the beta subunit being regulatory in function . More information about this protein can be found at Protein of the Month: ATP Synthases .; GO: 0016820 hydrolase activity acting on acid anhydrides catalyzing transmembrane movement of substances, 0015986 ATP synthesis coupled proton transport, 0016021 integral to membrane, 0016469 proton-transporting two-sector ATPase complex. Probab=61.19 E-value=5.4 Score=19.76 Aligned_cols=225 Identities=17% Similarity=0.211 Sum_probs=106.4 Q ss_pred HHHHHHHHHHHHHHHCCCC-CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH----CCCCCCCCCCEEEEEECCCHHE Q ss_conf 0388999999986400013-4652125531032233343455899999998631----0132001797789840420101 Q gi|254780622|r 131 AKPATQRNVEILQKDGCYF-IGPESGAMAESNGYGVGRMSEPCDIIRQITWLLY----KSKELLLKGKRALVTSGPTYEP 205 (405) Q Consensus 131 ~~p~~~~nl~~L~~~g~~v-i~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~----~~~~~~l~gk~vlITaG~T~E~ 205 (405) -.-+||..|.+-.+-.+.| |+ ||+.|. +..+.+...-. ++. .+|-.+.|||.-- .-= T Consensus 237 GKTVT~~~LAkws~a~ivvYiG--------CGERGN-------EMt~vl~~FP~l~dp~TG-~pLm~RT~LiANT-SNM- 298 (584) T TIGR01043 237 GKTVTQQQLAKWSDADIVVYIG--------CGERGN-------EMTEVLEEFPELEDPKTG-KPLMERTVLIANT-SNM- 298 (584) T ss_pred CCHHHHHHHHHHHCCCEEEEEC--------CCCCCC-------HHHHHHHHCCCCCCCCCC-HHHHHCCEEEECC-CCC- T ss_conf 5046777775430473799961--------688752-------589999848786886353-1565420533526-787- Q ss_pred ECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---------------CCCCEEEEEHHHHHHHHHHHHH--C Q ss_conf 0213576215772788999999982588389984156677---------------6567467546577899999985--0 Q gi|254780622|r 206 LDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIA---------------DPPNVMTIHVERAEDMLQEVLK--A 268 (405) Q Consensus 206 ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~---------------~~~~~~~i~v~t~~em~~~~~~--~ 268 (405) | +=.--||=-+|..||++++.+|++|.|.+.+++=. --+|+..+-..--.|+|+..=. . T Consensus 299 --P--VAAREas~Y~GiTiAEYfRD~GYdv~L~ADSTSRWAEA~ReisgRlEEMPgEEGyPaYLasrLaefYERAG~~~~ 374 (584) T TIGR01043 299 --P--VAAREASIYTGITIAEYFRDMGYDVALMADSTSRWAEALREISGRLEEMPGEEGYPAYLASRLAEFYERAGRVKT 374 (584) T ss_pred --C--HHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEE T ss_conf --5--344011232110253344116851688724752178999875202102778788624688888776651460223 Q ss_pred C-C---CCEEEEEHHHH----HHHHHHHHHCCCCCCCCCCCCEEEEEECHHHH-HHHHHCCCCCC--EEEEEECCCCHHH Q ss_conf 5-8---88799740444----44322221011233455775104552180689-88762148995--8999811412389 Q gi|254780622|r 269 L-P---VDIAVMVSAVS----DWRFPKIAGTKIKRKDIGDTMRIDLMENPDIL-KIIGHHQCRPS--IVVGFAAETQCIE 337 (405) Q Consensus 269 ~-~---~D~~I~aAAVS----Df~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL-~~i~~~k~~~~--~lVGFkaET~~l~ 337 (405) + . ..-+-...||| ||.=+ + . .-+|++++.-==| ..|++++..|. .+-+|++=.+.+. T Consensus 375 l~~~~~~gsv~v~gAVSPPGGDfsEP------V--t----~~TlR~vkvFWaLD~~La~~RHfPaInW~~sySlY~d~~~ 442 (584) T TIGR01043 375 LGGEEREGSVTVVGAVSPPGGDFSEP------V--T----QNTLRIVKVFWALDAKLAQRRHFPAINWLQSYSLYVDSVQ 442 (584) T ss_pred CCCCCCEEEEEEEECCCCCCCCCCCC------C--C----CCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHH T ss_conf 16887447899996147755787886------2--2----2744789873001178874378973020114577688899 Q ss_pred -------HHHHHHHHHCCCCEEEEE-CCCCCCCCCCCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHH Q ss_conf -------999999997499899992-057767777766118999836985972789989999999999999 Q gi|254780622|r 338 -------QNAREKLLNKGADFIVSN-CILPDTGFVGKEWNKVSIVFPDKIEEYPELPKAEVADRLCHLIVE 400 (405) Q Consensus 338 -------~~A~~Kl~~K~~D~IVAN-~i~~~~~~fgsd~n~v~li~~~~~~~~~~~sK~~iA~~Il~~i~~ 400 (405) +.-..++.+.-.+++.-- .|. .-|.|+.++...+-.+ --.++|+.|-+..++ T Consensus 443 ~W~~~Nv~~~w~~~R~~a~~~L~~E~eL~----------eIV~LVG~d~L~~~~~-~~Le~ar~~re~fL~ 502 (584) T TIGR01043 443 DWWAENVDPDWRELRDEAMDLLQKEAELQ----------EIVQLVGPDALPEKEK-LILEVARLIREAFLQ 502 (584) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHCCCCCCCHHHH-HHHHHHHHHHHHHHH T ss_conf 99874002779999999999975155677----------7875317756760245-789999999998766 No 476 >PRK07591 threonine synthase; Validated Probab=61.08 E-value=12 Score=17.43 Aligned_cols=50 Identities=20% Similarity=0.149 Sum_probs=23.3 Q ss_pred EEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 7884111888988520245521466675227996898405660000038899999998640001346 Q gi|254780622|r 85 LVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIG 151 (405) Q Consensus 85 ~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~ 151 (405) -|+++-|.|+=+-+|. .+....-+-++++|. . +-...+.+.+.+|..++. T Consensus 141 ~vv~aSsGNagas~Aa---------yaA~aGi~~~I~vP~------~--~~~~K~~q~~~yGA~vv~ 190 (422) T PRK07591 141 TVSCASTGNLANSVAA---------IAAHAGLDCCVFIPA------D--LEAGKVVGTLVYGPTLVA 190 (422) T ss_pred EEEECCCCCHHHHHHH---------HHHHCCCCEEEEEEC------C--CCHHHHHHHHHCCCEEEE T ss_conf 8998189978999999---------999839956999308------8--888899989856998999 No 477 >PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional Probab=60.89 E-value=12 Score=17.41 Aligned_cols=174 Identities=18% Similarity=0.179 Sum_probs=97.2 Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC Q ss_conf 84056600000388999999986400013465212553103223334345589999999863101320017977898404 Q gi|254780622|r 121 IAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAMAESNGYGVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSG 200 (405) Q Consensus 121 iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~la~c~~~G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG 200 (405) +-|-=...-.+-...+++++.|.+.|+.=+-+ ||..|.+-....++-..-+....... . .++-|-+| T Consensus 10 vTPF~~dg~iD~~~l~~~v~~li~~Gv~gi~v-------~GstGE~~~Ls~eEr~~v~~~~v~~~-----~-grvpvi~g 76 (296) T PRK03620 10 VTPFDADGSFDEAAYREHLEWLAPYGAAALFA-------AGGTGEFFSLTPDEYSQVVRAAVEAC-----A-GRVPVIAG 76 (296) T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-------CCCCCCHHHCCHHHHHHHHHHHHHHH-----C-CCCEEEEC T ss_conf 18838995959999999999999779998996-------84231343489999999999999983-----8-97359825 Q ss_pred CCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEEEEHHH Q ss_conf 20101021357621577278899999998258838998415667765674675465778999999850588879974044 Q gi|254780622|r 201 PTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIHVERAEDMLQEVLKALPVDIAVMVSAV 280 (405) Q Consensus 201 ~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~v~t~~em~~~~~~~~~~D~~I~aAAV 280 (405) .. . ++ +.-.++|+++...||+-.++.- |++....-+...+.++.+.++.+.-+++-. T Consensus 77 vg-----------~-~t-~~ai~la~~A~~~Gadai~v~p-------Pyy~~~~~~~l~~~~~~ia~a~~lPi~lYn--- 133 (296) T PRK03620 77 AG-----------G-GT-AQAIEYAQAAERAGADGILLLP-------PYLTEAPQEGLAAHVEAVCKSTDLGVIVYN--- 133 (296) T ss_pred CC-----------C-CH-HHHHHHHHHHHHCCCCEEEECC-------CCCCCCCHHHHHHHHHHHHHHCCCCEEEEC--- T ss_conf 77-----------5-37-9999999999982999899669-------867899999999999999983189977517--- Q ss_pred HHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 4443222210112334557751045521806898876214899589998114123899999999974998999920 Q gi|254780622|r 281 SDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKIIGHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFIVSNC 356 (405) Q Consensus 281 SDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~IVAN~ 356 (405) + ... .-+|+.+..+.+ +.| -++|+|--+.++. +..+-+.+-+-++.+.+. T Consensus 134 ---~------------~~~-------~~~~~~l~~L~~-~~p--nivgiKdss~d~~-~~~~~~~~~~~~~~v~~G 183 (296) T PRK03620 134 ---R------------DNA-------VLTADTLARLAE-RCP--NLIGFKDGVGDIE-LMVRITRALGDRLLYLGG 183 (296) T ss_pred ---C------------CCC-------CCCHHHHHHHHH-HCC--CEEEEEECCCCHH-HHHHHHHHCCCCEEEEEC T ss_conf ---8------------887-------769999999997-289--8899995868899-999999976997599828 No 478 >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated Probab=60.77 E-value=12 Score=17.53 Aligned_cols=38 Identities=24% Similarity=0.141 Sum_probs=22.2 Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC-HHHHHHC Q ss_conf 56999952847899999999999987988999858-5686306 Q gi|254780622|r 6 KKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMT-KSAQKFI 47 (405) Q Consensus 6 k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T-~~A~~fi 47 (405) |||.+.=+|-|-+ -++-.+-.+|++|+++=. +.|++-+ T Consensus 3 kkVAVIGAGvMGs----GwAa~FA~aG~~V~L~Dp~peA~~ki 41 (489) T PRK07531 3 MKAACIGGGVIGG----GWAARFLLNGWDVAVFDPHPEAERII 41 (489) T ss_pred CEEEEECCCHHHH----HHHHHHHHCCCEEEEEECCHHHHHHH T ss_conf 6799987188689----99999995799699994887899999 No 479 >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog Probab=60.76 E-value=13 Score=17.39 Aligned_cols=34 Identities=32% Similarity=0.393 Sum_probs=26.0 Q ss_pred EEEEEE-------ECHHHHHHHHHHHHHHHHCCCEEEEEECH Q ss_conf 699995-------28478999999999999879889998585 Q gi|254780622|r 7 KIALIM-------CGSVAVYKSLDLIRRLRERGAVVIPVMTK 41 (405) Q Consensus 7 ~Illgv-------tGsiaa~k~~~l~~~L~~~g~~V~vv~T~ 41 (405) ||.+.- .||+..| +.+|.+.|.+.|++|.++-+. T Consensus 1 ~ia~i~~~~~Pp~~GG~e~~-v~~La~~L~~~Gh~V~v~t~~ 41 (363) T cd04955 1 KIAIIGTRGIPAKYGGFETF-VEELAPRLVARGHEVTVYCRS 41 (363) T ss_pred CEEEECCCCCCCCCCCHHHH-HHHHHHHHHHCCCEEEEEECC T ss_conf 98999168489999878999-999999999779979999878 No 480 >pfam08323 Glyco_transf_5 Starch synthase catalytic domain. Probab=60.64 E-value=13 Score=17.38 Aligned_cols=31 Identities=19% Similarity=0.148 Sum_probs=23.4 Q ss_pred EEECHHHHHHHHHHHHHHHHCCCEEEEEECHH Q ss_conf 95284789999999999998798899985856 Q gi|254780622|r 11 IMCGSVAVYKSLDLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 11 gvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~ 42 (405) .-+|+.+-+ +..|.+.|.+.|++|+|+|-.- T Consensus 12 ~KvGGLgdv-v~~Lp~aL~~~G~~V~vi~P~Y 42 (229) T pfam08323 12 AKTGGLADV-VGALPKALAKLGHDVRVILPRY 42 (229) T ss_pred CCCCCHHHH-HHHHHHHHHHCCCEEEEEECCC T ss_conf 246658999-9999999997699499993289 No 481 >pfam05179 CDC73 RNA pol II accessory factor, Cdc73 family. Probab=60.46 E-value=7.2 Score=18.95 Aligned_cols=38 Identities=16% Similarity=0.349 Sum_probs=28.8 Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH Q ss_conf 7996898405660000038899999998640001346521255 Q gi|254780622|r 115 GDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCYFIGPESGAM 157 (405) Q Consensus 115 ~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~vi~P~~g~l 157 (405) .+.||+++|+--+.| ++--|++.+-++|.+| .|+.... T Consensus 115 sr~PIIlvp~a~tSL----itm~NiK~fLqdg~fV-p~~~~~~ 152 (273) T pfam05179 115 SRDPIILIPSAASSL----ITMYNIKDFLQEGKYV-PVDAKRK 152 (273) T ss_pred CCCCEEEECCCHHHH----HHHHHHHHHHHCCCCC-CHHHHHH T ss_conf 999989978751446----6698699998548403-8134210 No 482 >TIGR01138 cysM cysteine synthase B; InterPro: IPR005858 Cysteine synthase B (O-acetylserine (thiol)-lyase, 2.5.1.47 from EC) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK (IPR005859 from INTERPRO) in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine. Probab=60.20 E-value=8.7 Score=18.41 Aligned_cols=55 Identities=16% Similarity=0.244 Sum_probs=33.8 Q ss_pred EEEEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCC--CCCCCHHH Q ss_conf 7884111888988520245521466675227996898405660000038899999998640001--34652125 Q gi|254780622|r 85 LVVAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKPATQRNVEILQKDGCY--FIGPESGA 156 (405) Q Consensus 85 ~iVaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p~~~~nl~~L~~~g~~--vi~P~~g~ 156 (405) +||--.|.|| ||| .+.+.|-.+-|+-+ +|..| .++|-=+.++.+|.. .++|+.|. T Consensus 64 vlI~ATSGNT------GIA----LAM~aA~~G~~~~L--~MP~N-----~s~ERk~~~~AyGA~L~L~~~~~G~ 120 (300) T TIGR01138 64 VLIEATSGNT------GIA----LAMVAALKGYKMEL--LMPDN-----VSEERKAAMKAYGAELILVDKEEGM 120 (300) T ss_pred EEEECCCCCH------HHH----HHHHHHHCCCEEEE--ECCCC-----CHHHHHHHHHHCCCEEEEECCCCCC T ss_conf 7897168867------899----99999855942899--77877-----4579999998629548984423561 No 483 >TIGR02685 pter_reduc_Leis pteridine reductase; InterPro: IPR014058 Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.. Probab=60.14 E-value=13 Score=17.32 Aligned_cols=67 Identities=18% Similarity=0.205 Sum_probs=48.7 Q ss_pred HHHHHHHHHHHHCCCCEEEEECC-----------------------------CC----CCCCCCEEEEEHHHHHHHHHHH Q ss_conf 78899999998258838998415-----------------------------66----7765674675465778999999 Q gi|254780622|r 219 QQGHAIAKSLAYFGAEVILISGP-----------------------------VS----IADPPNVMTIHVERAEDMLQEV 265 (405) Q Consensus 219 k~G~~iA~~~~~~Ga~V~li~g~-----------------------------~~----~~~~~~~~~i~v~t~~em~~~~ 265 (405) |.|.+||..+++.|+.|.+=+-. .+ .+....+.+.-...-+|+.+.+ T Consensus 12 RiG~sIAv~LH~~GyrVv~HYh~Sa~aA~~LaaeLNa~R~nsAv~~qaDLsns~tasfsetdGsvPv~L~~~Ce~iid~c 91 (283) T TIGR02685 12 RIGRSIAVKLHQEGYRVVVHYHRSAAAASTLAAELNAERANSAVVCQADLSNSATASFSETDGSVPVTLLSSCEEIIDAC 91 (283) T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHCCCCCCCCCCEEHHHHHHHHHHHH T ss_conf 52189999985089889994024567899999997340789769996131310000001247742012674378898644 Q ss_pred HHCCC-CCEEEEEHHHHHHHHHH Q ss_conf 85058-88799740444443222 Q gi|254780622|r 266 LKALP-VDIAVMVSAVSDWRFPK 287 (405) Q Consensus 266 ~~~~~-~D~~I~aAAVSDf~~~~ 287 (405) ..++- ||+++=.| |=|+|.- T Consensus 92 frafGRCDVLVNNA--SafYPTP 112 (283) T TIGR02685 92 FRAFGRCDVLVNNA--SAFYPTP 112 (283) T ss_pred HHCCCCCCEEECCC--CCCCCCC T ss_conf 32058631023164--0005788 No 484 >PRK09564 coenzyme A disulfide reductase; Reviewed Probab=60.12 E-value=13 Score=17.32 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=26.2 Q ss_pred CCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC Q ss_conf 797789840420101021357621577278899999998258838998415 Q gi|254780622|r 191 KGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGP 241 (405) Q Consensus 191 ~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~ 241 (405) ..|+|+|-+|| -.|.++|..+.++|.+||++... T Consensus 148 ~~k~vvViGgG-----------------~ig~E~A~~l~~~G~~Vtiv~~~ 181 (443) T PRK09564 148 EIKRIVIIGAG-----------------FIGLEVVEAAKKLGKNVRIIQLE 181 (443) T ss_pred CCCEEEEECCH-----------------HHHHHHHHHHHHCCCEEEEEEEC T ss_conf 79659999970-----------------99999999998669889999957 No 485 >pfam10727 Rossmann-like Rossmann-like domain. This family of proteins contain a Rossmann-like domain. Probab=60.08 E-value=12 Score=17.40 Aligned_cols=27 Identities=33% Similarity=0.364 Sum_probs=20.9 Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCC Q ss_conf 772788999999982588389984156 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFGAEVILISGPV 242 (405) Q Consensus 216 SSGk~G~~iA~~~~~~Ga~V~li~g~~ 242 (405) +-||.|.+|+.++...|+.|+=+++.. T Consensus 4 GaGrvG~~L~~al~~aGh~v~gv~srs 30 (111) T pfam10727 4 SAGRVGVALGEALERAGHVVHAISAIS 30 (111) T ss_pred CCCHHHHHHHHHHHHCCCEEEEEEECC T ss_conf 765779999999997898289998389 No 486 >PRK08192 aspartate carbamoyltransferase; Provisional Probab=60.06 E-value=13 Score=17.31 Aligned_cols=58 Identities=14% Similarity=0.252 Sum_probs=35.2 Q ss_pred CCCCCCEEEEEEECHHH-HHHHHHHHHHHHH-----------CCCEEEEEECHHHHHHCCHHHHH----HHHCCCC Q ss_conf 98885569999528478-9999999999998-----------79889998585686306989999----9747975 Q gi|254780622|r 1 MDLSGKKIALIMCGSVA-VYKSLDLIRRLRE-----------RGAVVIPVMTKSAQKFITPLIVG----AISNRRV 60 (405) Q Consensus 1 m~l~~k~IllgvtGsia-a~k~~~l~~~L~~-----------~g~~V~vv~T~~A~~fi~~~~l~----~lt~~~v 60 (405) |+|+||++|=.--=|-. .....+++..|++ .|-.+-.++-+.++| |..+|| .|.|+.+ T Consensus 1 m~l~grhlLsi~Dls~~ei~~ll~~A~~lk~~~~~~~~~~~L~gk~la~lF~kpSTR--TR~SFE~A~~~LGg~~~ 74 (338) T PRK08192 1 MQFEGSHILSVNQLDLDSIQTIFNVASRMMPYALRQKRTTVLDGAILGNLFFEPSTR--TRVSFGCAFNLLGGHVR 74 (338) T ss_pred CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC--HHHHHHHHHHHCCCCEE T ss_conf 989987859700189999999999999998787478878668999899996289744--69999999998499860 No 487 >PRK07667 uridine kinase; Provisional Probab=59.96 E-value=13 Score=17.38 Aligned_cols=39 Identities=13% Similarity=0.122 Sum_probs=27.4 Q ss_pred CCCEEEEEEECHHHHHHHH---HHHHHHHHCCCEEEEEECHH Q ss_conf 8556999952847899999---99999998798899985856 Q gi|254780622|r 4 SGKKIALIMCGSVAVYKSL---DLIRRLRERGAVVIPVMTKS 42 (405) Q Consensus 4 ~~k~IllgvtGsiaa~k~~---~l~~~L~~~g~~V~vv~T~~ 42 (405) ++.|.++||.|+-++=|+. .|++.|...|..|.++-.+. T Consensus 11 ~~~r~iIgIaG~sgSGKTTla~~L~~~l~~~~~~v~v~~~Dd 52 (190) T PRK07667 11 KENRFILGIDGLSRSGKTTFVANLKENMKQEGIPFHIFHIDD 52 (190) T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC T ss_conf 598699997798978899999999999866598379996662 No 488 >TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases. Probab=59.92 E-value=10 Score=17.94 Aligned_cols=27 Identities=19% Similarity=0.179 Sum_probs=15.2 Q ss_pred EEEECHHHHHHHHHHHHHHHHCCCEEEEEE Q ss_conf 995284789999999999998798899985 Q gi|254780622|r 10 LIMCGSVAVYKSLDLIRRLRERGAVVIPVM 39 (405) Q Consensus 10 lgvtGsiaa~k~~~l~~~L~~~g~~V~vv~ 39 (405) +.|.|+|.- .-.+..|.+.|++|.|+= T Consensus 4 ~VIGaGi~G---ls~A~~La~~G~~V~vle 30 (365) T TIGR03364 4 IIVGAGILG---LAHAYAAARRGLSVTVIE 30 (365) T ss_pred EEECCHHHH---HHHHHHHHHCCCCEEEEC T ss_conf 999932999---999999997899499998 No 489 >PRK11797 D-ribose pyranase; Provisional Probab=59.75 E-value=13 Score=17.28 Aligned_cols=58 Identities=26% Similarity=0.320 Sum_probs=43.3 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEE------HHHHHHHHHHHHHCCCCCEE Q ss_conf 72788999999982588389984156677656746754------65778999999850588879 Q gi|254780622|r 217 SGQQGHAIAKSLAYFGAEVILISGPVSIADPPNVMTIH------VERAEDMLQEVLKALPVDIA 274 (405) Q Consensus 217 SGk~G~~iA~~~~~~Ga~V~li~g~~~~~~~~~~~~i~------v~t~~em~~~~~~~~~~D~~ 274 (405) +|-..-.|...+...||-=.++-+-.+.+.|++++.+. +.+..|.++++++..+.+-. T Consensus 4 ~~iLnp~Ll~~La~mGHgD~ivIaDanfPi~~~v~~idLal~~g~P~~~~vL~ail~~~~ve~~ 67 (138) T PRK11797 4 TGLLNSEISSVIARLGHTDTLVICDAGLPIPNGVERIDLALTKGVPSFLDVLDVVLSEMQVEKA 67 (138) T ss_pred CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 5666999999999769998799914899989998799820467987799999998634535655 No 490 >pfam01916 DS Deoxyhypusine synthase. Eukaryotic initiation factor 5A (eIF-5A) contains an unusual amino acid, hypusine [N epsilon-(4-aminobutyl-2-hydroxy)lysine]. The first step in the post-translational formation of hypusine is catalysed by the enzyme deoxyhypusine synthase (DS) EC:1.1.1.249. The modified version of eIF-5A, and DS, are required for eukaryotic cell proliferation. Probab=59.60 E-value=13 Score=17.26 Aligned_cols=49 Identities=12% Similarity=0.157 Sum_probs=37.6 Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHH Q ss_conf 5569999528478999999999999879889998585686306989999974 Q gi|254780622|r 5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAIS 56 (405) Q Consensus 5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt 56 (405) +.+|.|+.+|.+..-..-.+++.|.|+|. |.+|.|..|. +-.+.++.+. T Consensus 37 ~~tifLtlagam~saGlr~~ia~LIr~g~-Vd~IvtTgan--lehDi~~~~g 85 (297) T pfam01916 37 EITIFLGYTSNLISSGMREIIRYLVQHKK-ISALVTTAGG--VEEDLIKCLG 85 (297) T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHCCC-EEEEEECCCC--CHHHHHHHHC T ss_conf 74599972011203768899999998498-4599905753--1578998717 No 491 >PRK05480 uridine kinase; Provisional Probab=59.44 E-value=13 Score=17.25 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=17.1 Q ss_pred CCCEEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 855699995284789999999999998 Q gi|254780622|r 4 SGKKIALIMCGSVAVYKSLDLIRRLRE 30 (405) Q Consensus 4 ~~k~IllgvtGsiaa~k~~~l~~~L~~ 30 (405) ..|-+++||+|+.++-|+- +++.|.+ T Consensus 3 ~k~P~iIgIaG~SgSGKTT-~a~~L~~ 28 (209) T PRK05480 3 MKQPIIIGIAGGSGSGKTT-VASTIYE 28 (209) T ss_pred CCCCEEEEEECCCCCCHHH-HHHHHHH T ss_conf 8898899998999778999-9999999 No 492 >PRK11559 garR tartronate semialdehyde reductase; Provisional Probab=59.24 E-value=9.8 Score=18.08 Aligned_cols=120 Identities=23% Similarity=0.339 Sum_probs=59.7 Q ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE Q ss_conf 69999528478999999999999879889998585686306989999974797582076788778774300114465578 Q gi|254780622|r 7 KIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVYTHLLSYKEGYESNHIQLANECDLLV 86 (405) Q Consensus 7 ~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~~~~~~~~~~~~~~Hi~l~~~aD~~i 86 (405) ||.+.=.|.+- -.+++.|.+.|++|.+. ..+.++. ..|... |-.+.. + --+++..+|+++ T Consensus 3 kIgfIGlG~MG----~~ma~~L~~~G~~v~v~-dr~~~~~---~~l~~~-Ga~~~~---------s--~~e~~~~~dvvi 62 (295) T PRK11559 3 KVGFIGLGIMG----KPMSKNLLKAGYSLVVY-DRNPEAI---ADVIAA-GAETAS---------T--AKAIAEQCDVII 62 (295) T ss_pred EEEEECCHHHH----HHHHHHHHHCCCEEEEE-ECCHHHH---HHHHHC-CCCCCC---------C--HHHHHHCCCEEE T ss_conf 89998405769----99999999789958999-2999999---999985-992039---------9--999984388789 Q ss_pred EEECCHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHH-HHHHHHHHHHHHCCCCCC-CCHHH Q ss_conf 84111888988520245521466675227996898405660000038-899999998640001346-52125 Q gi|254780622|r 87 VAPASANFIAHVAHGMVYDLASAILLAKGDQPVLIAPAMNFMMWAKP-ATQRNVEILQKDGCYFIG-PESGA 156 (405) Q Consensus 87 VaPaTaNtiaK~A~GiaD~llt~~~la~~~~pi~iaPaMn~~M~~~p-~~~~nl~~L~~~g~~vi~-P~~g~ 156 (405) .+=.+..-+-.+..|- +.++.. +..++ +++ -|-| .+| .+++.-+.+++.|+.+++ |.+|. T Consensus 63 ~~l~~~~~v~~v~~g~-~gi~~~---~~~g~-iii--d~sT---~~p~~~~~~a~~~~~~g~~~lDaPVsGg 124 (295) T PRK11559 63 TMLPNSPHVKEVALGE-NGIIEG---AKPGT-VLI--DMSS---IAPLASREISEALKAKGIEMLDAPVSGG 124 (295) T ss_pred EECCCCCCHHHHHHCC-CCCHHC---CCCCC-EEE--ECCC---CCHHHHHHHHHHHHHCCCEEEECCCCCC T ss_conf 9668981077663077-660113---89998-899--8999---9999999999999965983894247688 No 493 >cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis. Probab=59.11 E-value=6.2 Score=19.36 Aligned_cols=26 Identities=27% Similarity=0.281 Sum_probs=15.1 Q ss_pred EEEEECHHHHHHHHHHHHHHHHCCCEE Q ss_conf 999528478999999999999879889 Q gi|254780622|r 9 ALIMCGSVAVYKSLDLIRRLRERGAVV 35 (405) Q Consensus 9 llgvtGsiaa~k~~~l~~~L~~~g~~V 35 (405) ++||||+|+.-|+.- .+.|++.|+.| T Consensus 1 iigiTG~igSGKStv-~~~l~~~g~~v 26 (179) T cd02022 1 IIGLTGGIGSGKSTV-AKLLKELGIPV 26 (179) T ss_pred CEEEECCCCCCHHHH-HHHHHHCCCEE T ss_conf 988637875789999-99999879909 No 494 >PRK09954 hypothetical protein; Provisional Probab=58.98 E-value=13 Score=17.20 Aligned_cols=28 Identities=39% Similarity=0.574 Sum_probs=23.4 Q ss_pred ECCCCCHHHHHHHHHHHHCCCCEEEEEC Q ss_conf 2157727889999999825883899841 Q gi|254780622|r 213 ANRSSGQQGHAIAKSLAYFGAEVILISG 240 (405) Q Consensus 213 tN~SSGk~G~~iA~~~~~~Ga~V~li~g 240 (405) ...|.|=-|.-+|+.+.+.|.+|++|.. T Consensus 88 i~~s~GGvGrNiA~nLarLG~~v~lIs~ 115 (362) T PRK09954 88 IHCSAGGVGRNIAHNLALLGRDVHLLSA 115 (362) T ss_pred EEECCCCHHHHHHHHHHHCCCCEEEEEE T ss_conf 6888884899999999976997699999 No 495 >PRK07952 DNA replication protein DnaC; Validated Probab=58.96 E-value=13 Score=17.19 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=28.0 Q ss_pred CEEEEECCCCCHH--HHHHHHHHHHCCCCEEEEECC Q ss_conf 1357621577278--899999998258838998415 Q gi|254780622|r 208 PMRYIANRSSGQQ--GHAIAKSLAYFGAEVILISGP 241 (405) Q Consensus 208 ~VR~ItN~SSGk~--G~~iA~~~~~~Ga~V~li~g~ 241 (405) ..=|..++-|||+ ..+||.++..+|..|.+++-+ T Consensus 98 gLlF~G~~GTGKThLA~aIan~Li~~G~sVlf~t~~ 133 (242) T PRK07952 98 SFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVA 133 (242) T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHH T ss_conf 179978999978999999999999879949997799 No 496 >pfam00205 TPP_enzyme_M Thiamine pyrophosphate enzyme, central domain. The central domain of TPP enzymes contains a 2-fold Rossman fold. Probab=58.51 E-value=11 Score=17.82 Aligned_cols=11 Identities=36% Similarity=0.495 Sum_probs=4.4 Q ss_pred CCCEEEEEECC Q ss_conf 46557884111 Q gi|254780622|r 81 ECDLLVVAPAS 91 (405) Q Consensus 81 ~aD~~iVaPaT 91 (405) .+|++++.-+. T Consensus 77 ~aDlvl~lG~~ 87 (138) T pfam00205 77 EADLVLAIGAR 87 (138) T ss_pred CCCEEEEECCC T ss_conf 39999997888 No 497 >COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Probab=58.48 E-value=12 Score=17.61 Aligned_cols=24 Identities=38% Similarity=0.472 Sum_probs=13.5 Q ss_pred CHHHHHHHHHH-HHHHHHCCCEEEE Q ss_conf 84789999999-9999987988999 Q gi|254780622|r 14 GSVAVYKSLDL-IRRLRERGAVVIP 37 (405) Q Consensus 14 Gsiaa~k~~~l-~~~L~~~g~~V~v 37 (405) |.+..|=..|. +|-++..|.+|.- T Consensus 23 GH~~~~l~ADv~aRy~Rl~G~~v~f 47 (558) T COG0143 23 GHLYTYLAADVYARYLRLRGYEVFF 47 (558) T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEE T ss_conf 3678887899999999826975899 No 498 >PRK01259 ribose-phosphate pyrophosphokinase; Provisional Probab=58.32 E-value=14 Score=17.12 Aligned_cols=19 Identities=26% Similarity=0.235 Sum_probs=9.1 Q ss_pred CCCHHHHHHHHHHHHCCCC Q ss_conf 7727889999999825883 Q gi|254780622|r 216 SSGQQGHAIAKSLAYFGAE 234 (405) Q Consensus 216 SSGk~G~~iA~~~~~~Ga~ 234 (405) |||-+=..-|+.+..+||. T Consensus 219 ~TGgTl~~aa~~Lk~~GA~ 237 (309) T PRK01259 219 DTGGTLCKAAEALKERGAK 237 (309) T ss_pred HCCHHHHHHHHHHHHCCCC T ss_conf 3456599999999756996 No 499 >PRK01221 putative deoxyhypusine synthase; Provisional Probab=58.26 E-value=14 Score=17.12 Aligned_cols=53 Identities=19% Similarity=0.172 Sum_probs=38.4 Q ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCHHHHHHHHCCCCC Q ss_conf 556999952847899999999999987988999858568630698999997479758 Q gi|254780622|r 5 GKKIALIMCGSVAVYKSLDLIRRLRERGAVVIPVMTKSAQKFITPLIVGAISNRRVY 61 (405) Q Consensus 5 ~k~IllgvtGsiaa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~lt~~~v~ 61 (405) +-++.|+.+|++..-..-.+++.|+|+|. |.+|.|..|. +..+.++.+ +++-| T Consensus 54 ~~~~fLtlagam~saGlr~ii~~LIr~g~-Vd~IvtTgan--leeDi~~~~-g~~~y 106 (312) T PRK01221 54 ADLRFLSFTANLVSTGLRGLIADLIRRGL-FDVVITTCGT--LDHDIARSF-GGKYY 106 (312) T ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHCCC-EEEEECCCCC--CHHHHHHHC-CCCEE T ss_conf 98399976201125668999999998498-3399816886--016788613-98602 No 500 >COG0621 MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis] Probab=57.94 E-value=14 Score=17.08 Aligned_cols=155 Identities=17% Similarity=0.167 Sum_probs=0.0 Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHEECCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCC Q ss_conf 33343455899999998631013200179778984042010102135762157727889999999825883899841566 Q gi|254780622|r 164 GVGRMSEPCDIIRQITWLLYKSKELLLKGKRALVTSGPTYEPLDPMRYIANRSSGQQGHAIAKSLAYFGAEVILISGPVS 243 (405) Q Consensus 164 G~grl~e~~~I~~~~~~~~~~~~~~~l~gk~vlITaG~T~E~ID~VR~ItN~SSGk~G~~iA~~~~~~Ga~V~li~g~~~ 243 (405) |+-|--++++|+.++.++..++- |.|.+|+=-|.-|=-+... | ...+|+-+..-+. T Consensus 168 G~~rSr~~e~Il~ev~~Lv~~G~------kEI~L~gqdv~aYG~D~~~------~--~~~l~~Ll~~l~~---------- 223 (437) T COG0621 168 GKERSRPPEDILKEVKRLVAQGV------KEIVLTGQDVNAYGKDLGG------G--KPNLADLLRELSK---------- 223 (437) T ss_pred CCCCCCCHHHHHHHHHHHHHCCC------EEEEEEEEEHHHCCCCCCC------C--CCCHHHHHHHHHC---------- T ss_conf 87557798999999999998897------4999998811010446777------7--6689999999960---------- Q ss_pred CCCCCCEEEEEHHH------HHHHHHHHHHCCC-CCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHH Q ss_conf 77656746754657------7899999985058-8879974044444322221011233455775104552180689887 Q gi|254780622|r 244 IADPPNVMTIHVER------AEDMLQEVLKALP-VDIAVMVSAVSDWRFPKIAGTKIKRKDIGDTMRIDLMENPDILKII 316 (405) Q Consensus 244 ~~~~~~~~~i~v~t------~~em~~~~~~~~~-~D~~I~aAAVSDf~~~~~~~~Kikk~s~~~~l~L~L~~~pdIL~~i 316 (405) .+|+..+++.| .+|+.++..+.-+ +-.+ +--+..-++.=+|+=.-.-+-.--+.-..++-+.+ T Consensus 224 ---I~G~~riR~~~~~P~~~~d~lIe~~~~~~kv~~~l-------HlPvQsGsd~ILk~M~R~yt~e~~~~~i~k~R~~~ 293 (437) T COG0621 224 ---IPGIERIRFGSSHPLEFTDDLIEAIAETPKVCPHL-------HLPVQSGSDRILKRMKRGYTVEEYLEIIEKLRAAR 293 (437) T ss_pred ---CCCCEEEEEECCCCHHCCHHHHHHHHCCCCCCCCC-------CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHC T ss_conf ---79910899935880011889999986578414344-------67555698799997378767999999999999868 Q ss_pred HHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEE Q ss_conf 621489958999811412389999999997499899 Q gi|254780622|r 317 GHHQCRPSIVVGFAAETQCIEQNAREKLLNKGADFI 352 (405) Q Consensus 317 ~~~k~~~~~lVGFkaET~~l~~~A~~Kl~~K~~D~I 352 (405) -.......++|||--||++.-++..+-+++-+.|.+ T Consensus 294 Pd~~i~tDiIVGFPgETEedFe~tl~lv~e~~fd~~ 329 (437) T COG0621 294 PDIAISTDIIVGFPGETEEDFEETLDLVEEVRFDRL 329 (437) T ss_pred CCCEEECCEEEECCCCCHHHHHHHHHHHHHHCCCEE T ss_conf 985675267997999999999999999997488878 Done!