HHsearch alignment for GI: 254780623 and conserved domain: COG1718
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning].
Probab=99.08 E-value=4.3e-09 Score=89.62 Aligned_cols=196 Identities=22% Similarity=0.234 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHHEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 66778888655550212888723687640310468877778899987532114685433469179999999887888655
Q gi|254780623|r 126 PIAAASIAQVHPAVVHDINGYRKVAVKIIRPGVRKRFFRDIQVMYLIARIQEKLLPSMRRLCFSAVVRALEQVTKMEMDL 205 (517)
Q Consensus 126 PlasASiaQVh~A~l~d~~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ElD~ 205 (517)
T Consensus 55 ~istGKEA~Vy~a~~~~---~~~~avKiyr~~t~~fk~-----~~~Yi-~gd~Rf~~~~~-~rr~lv~~W~--------- 115 (268)
T COG1718 55 CISTGKEANVYLAETGD---GRYVAVKIYRTSTSEFKR-----IRRYI-QGDPRFRNSRS-NRRKLVFAWA--------- 115 (268)
T ss_pred ECCCCCCEEEEEECCCC---CCEEEEEEEEHHHHHHHH-----HHHHH-HCCHHHHCCCC-CHHHHHHHHH---------
T ss_conf 20377414778731578---753799997500355646-----88877-32646534788-8999999999---------
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99998898720244677664300001022178335300247863242677332002---256899999999999897448
Q gi|254780623|r 206 RLEAAAFSEMAENTVKDQGFRVPKIDWNRTERDVITMEWIDGVKISDTEKLRACGH---DLERLSVTLVQSFLLHTLRDG 282 (517)
Q Consensus 206 ~~Ea~n~~~~~~~~~~~~~v~vP~vy~~~st~~VLvmE~i~G~~i~d~~~l~~~~~---d~~~la~~l~~~~~~qi~~~G 282 (517)
T Consensus 116 ~kEf~NL~R~~e-----AGVrvP~Pi--~~~~nVLvMEfIg~~g-~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~ 187 (268)
T COG1718 116 RKEFRNLKRAYE-----AGVRVPEPI--AFRNNVLVMEFIGDDG-LPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAG 187 (268)
T ss_pred HHHHHHHHHHHH-----CCCCCCCCE--ECCCCEEEEEECCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999997-----599999861--0037758998316778-87987334787715589999999999999998629
Q ss_pred EECCCCCCCEEEEECCCCEEEEECCHHEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 66178786228980289535743403121698999999976699971872789999998412667789368999999
Q gi|254780623|r 283 FFHADLHPGNLFVDSKGYIVAVDMGITGRLSKRERRFLAEILYGFISRDYQRVADVHFEAGYVPRHHNRFSFAQAIR 359 (517)
Q Consensus 283 fFHaDPHpGNi~v~~dg~i~~lDfG~vg~l~~~~r~~l~~l~~a~~~~D~~~~~~~l~~lg~~~~~~d~~~~~~~i~ 359 (517)
T Consensus 188 LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp~-------a~e~L~RDv~Ni~~fF~r~gv---~~d~e~~l~~i~ 253 (268)
T COG1718 188 LVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHPN-------AFEFLERDVRNIARFFRRKGV---EADPEELLEEIK 253 (268)
T ss_pred CCCCCCHHHEEEEE-CCEEEEEECCCCCCCCCCC-------HHHHHHHHHHHHHHHHHHCCC---CCCHHHHHHHHH
T ss_conf 41135323506777-9907999883221467975-------689999999999999987288---889999999986